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1.
Toxicol Pathol ; 48(7): 905-908, 2020 10.
Article in English | MEDLINE | ID: mdl-32975497

ABSTRACT

Differentiating test article-related vascular changes from spontaneous findings is important for microscopic interpretation in drug safety evaluation studies intended for regulatory submission. Here, we report background spontaneous hepatic artery degeneration and necrosis in up to 20% of 3- to 9-month-old control male Sprague-Dawley rats in 23 individual safety studies. The vascular degeneration occurred in one cross section of a medium-sized hepatic artery near the hilus and ranged from acute intramural hemorrhage and fibrinoid necrosis to chronic fibrosis of the vascular wall with perivascular edema, hemorrhage, and inflammatory cell infiltrates. The cause was uncertain. Many microscopic features were consistent with systemic necrotizing arteriopathy (SNA) or polyarteritis; however, there was no change in arteries commonly affected in SNA/polyarteritis (mesenteric, pancreatic, or testicular arteries) and hepatic artery degeneration/necrosis occurred in younger rats which is unusual for SNA/polyarteritis. Spontaneous hepatic artery degeneration/necrosis represents a sporadic background finding that may be confused with a test article's toxicologic effect.


Subject(s)
Arteritis , Vasculitis , Animals , Hemorrhage , Male , Necrosis , Rats , Rats, Sprague-Dawley
2.
Mol Cell Biol ; 30(10): 2552-62, 2010 May.
Article in English | MEDLINE | ID: mdl-20308327

ABSTRACT

Heterogeneous nuclear ribonucleoprotein (hnRNP) H and F are members of a closely related subfamily of hnRNP proteins that are implicated in many aspects of RNA processing. hnRNP H and F are alternative splicing factors for numerous U2- and U12-dependent introns. The proteins have three RNA binding domains and two glycine-rich domains and localize to both the nucleus and cytoplasm, but little is known about which domains govern subcellular localization or splicing activity. We show here that the central glycine-tyrosine-arginine-rich (GYR) domain is responsible for nuclear localization, and a nonclassical nuclear localization signal (NLS) was mapped to a short, highly conserved sequence whose activity was compromised by point mutations. Glutathione S-transferase (GST) pulldown assays demonstrated that the hnRNP H NLS interacts with the import receptor transportin 1. Finally, we show that hnRNP H/F are transcription-dependent shuttling proteins. Collectively, the results suggest that hnRNP H and F are GYR domain-dependent shuttling proteins whose posttranslational modifications may alter nuclear localization and hence function.


Subject(s)
Active Transport, Cell Nucleus/physiology , Glycine/metabolism , Heterogeneous-Nuclear Ribonucleoprotein Group F-H , beta Karyopherins/metabolism , Alternative Splicing , Amino Acid Sequence , Cell Nucleus/chemistry , Cell Nucleus/metabolism , HeLa Cells , Heterogeneous-Nuclear Ribonucleoprotein Group F-H/genetics , Heterogeneous-Nuclear Ribonucleoprotein Group F-H/metabolism , Humans , Molecular Sequence Data , Mutation , Nuclear Localization Signals/metabolism , Protein Processing, Post-Translational , Protein Structure, Tertiary , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Sequence Alignment , beta Karyopherins/genetics
3.
J Biol Chem ; 281(5): 2478-88, 2006 Feb 03.
Article in English | MEDLINE | ID: mdl-16308319

ABSTRACT

An RNA-processing element from Rous sarcoma virus, the negative regulator of splicing (NRS), represses splicing to generate unspliced RNA that serves as mRNA and as genomic RNA for progeny virions and also promotes polyadenylation of the unspliced RNA. Integral to NRS function is the binding of U1 small nuclear ribonucleoprotein (snRNP), but its binding is controlled by U11 snRNP that binds to an overlapping site. U11 snRNP, the U1 counterpart for splicing of U12-dependent introns, binds the NRS remarkably well and requires G-rich elements just downstream of the consensus U11 binding site. We present evidence that heterogeneous nuclear ribonucleoprotein (hnRNP) H binds to the NRS G-rich elements and that hnRNP H is required for optimal U11 binding in vitro. It is further shown that hnRNP H (but not hnRNP F) can promote U11 binding and splicing from the NRS in vivo when tethered to the RNA as an MS2 fusion protein. Interestingly, 17% of the naturally occurring U12-dependent introns have at least two potential hnRNP H binding sites positioned similarly to the NRS. For two such introns from the SCN4A and P120 genes, we show that hnRNP H binds to each in a G-tract-dependent manner, that G-tract mutations strongly reduce splicing of minigene RNA, and that tethered hnRNP H restores splicing to mutant RNA. In support of a role for hnRNP H in both splicing pathways, hnRNP H antibodies co-precipitate U1 and U11 small nuclear ribonucleoproteins. These results indicate that hnRNP H is an auxiliary factor for U11 binding to the NRS and that, more generally, hnRNP H is a splicing factor for a subset of U12-dependent introns that harbor G-rich elements.


Subject(s)
Avian Sarcoma Viruses/genetics , Heterogeneous-Nuclear Ribonucleoprotein Group F-H/physiology , RNA Splicing , RNA, Small Nuclear/physiology , Regulatory Sequences, Ribonucleic Acid/genetics , Ribonucleoproteins, Small Nuclear/metabolism , Binding Sites , HeLa Cells , Humans , Introns , Mutation , RNA Processing, Post-Transcriptional , Recombinant Fusion Proteins , Ribonucleoproteins, Small Nuclear/genetics
4.
J Biol Chem ; 279(37): 38201-8, 2004 Sep 10.
Article in English | MEDLINE | ID: mdl-15252020

ABSTRACT

The Rous sarcoma virus (RSV) negative regulator of splicing (NRS) is an RNA element that represses splicing and promotes polyadenylation of viral RNA. The NRS acts as a pseudo 5' splice site (ss), and serine-arginine (SR) proteins, U1snRNP, and U6 small nuclear ribonucleoproteins (snRNPs) are implicated in its function. The NRS also efficiently binds U11 snRNP of the U12-dependent splicing pathway, which is interesting, because U11 binds only poorly to authentic substrates that lack a U12-type 3' splice site. It is of considerable interest to understand how the low abundance U11 snRNP binds the NRS so well. Here we show that U11 can bind the NRS as a mono-snRNP in vitro and that a G-rich element located downstream of the U11 site is required for efficient binding. Mutational analyses indicated that two of four G tracts in this region were important for optimal U11 binding and that the G-rich region did not function indirectly by promoting U1 snRNP binding to an overlapping site. Surprisingly, inactivation of U2 snRNP also decreased U11 binding to the NRS. The NRS harbors a branch point-like/pyrimidine tract sequence (BP/Py) just upstream of the U1/U11 site that is characteristic of 3' splice sites. Deletion of this region decreased U2 and U11 binding, and deletion of the G-rich region also reduced U2 binding. The G element, but not the BP/Py sequence, was also required for U11 binding to the NRS in vivo as assessed by minor class splicing from the NRS to a minor class 3'ss from the P120 gene. These results indicate that efficient U11 binding to the isolated NRS involves at least two elements in addition to the U11 consensus sequence and may have implications for U11 binding to authentic splicing substrates.


Subject(s)
Retroviridae/metabolism , Ribonucleoproteins, Small Nuclear/chemistry , Arginine/chemistry , Avian Sarcoma Viruses/metabolism , Base Sequence , Binding Sites , Biotinylation , Cell Line , Cell Nucleus/metabolism , DNA Mutational Analysis , Gene Deletion , Humans , Molecular Sequence Data , Plasmids/metabolism , Point Mutation , Protein Binding , Protein Structure, Tertiary , RNA/chemistry , RNA, Small Nuclear/metabolism , Ribonucleoprotein, U1 Small Nuclear/metabolism , Ribonucleoprotein, U4-U6 Small Nuclear/metabolism , Ribonucleoproteins, Small Nuclear/metabolism , Serine/chemistry , Transcription, Genetic , Transfection
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