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1.
Genome Res ; 9(2): 103-20, 1999 Feb.
Article in English | MEDLINE | ID: mdl-10022975

ABSTRACT

The nuclear receptor (NR) superfamily is the most abundant class of transcriptional regulators encoded in the Caenorhabditis elegans genome, with >200 predicted genes revealed by the screens and analysis of genomic sequence reported here. This is the largest number of NR genes yet described from a single species, although our analysis of available genomic sequence from the related nematode Caenorhabditis briggsae indicates that it also has a large number. Existing data demonstrate expression for 25% of the C. elegans NR sequences. Sequence conservation and statistical arguments suggest that the majority represent functional genes. An analysis of these genes based on the DNA-binding domain motif revealed that several NR classes conserved in both vertebrates and insects are also represented among the nematode genes, consistent with the existence of ancient NR classes shared among most, and perhaps all, metazoans. Most of the nematode NR sequences, however, are distinct from those currently known in other phyla, and reveal a previously unobserved diversity within the NR superfamily. In C. elegans, extensive proliferation and diversification of NR sequences have occurred on chromosome V, accounting for > 50% of the predicted NR genes.


Subject(s)
Caenorhabditis elegans/genetics , Evolution, Molecular , Genetic Variation/genetics , Receptors, Cytoplasmic and Nuclear/genetics , Amino Acid Sequence , Animals , Chromosome Mapping , Chromosomes , Cloning, Molecular , Conserved Sequence , DNA, Complementary , DNA, Helminth/classification , DNA, Helminth/isolation & purification , Gene Duplication , Genes, Helminth/genetics , Molecular Sequence Data , Phylogeny , RNA, Messenger/biosynthesis , RNA, Messenger/genetics
2.
Ann N Y Acad Sci ; 892: 169-86, 1999 Nov 18.
Article in English | MEDLINE | ID: mdl-10842662

ABSTRACT

A major action of insulin is to accelerate the rate of uptake of sugar into muscle and adipose cells following a meal. The biochemical mechanism by which this is accomplished has been a subject of intense experimentation, although elucidation of the pathways has remained elusive. In recent years, numerous signaling molecules and cascades modulated by insulin have been identified, although few have been definitively established as important to the metabolic actions of the hormone. An exception to this is the lipid kinase phosphatidylinositide 3'-kinase, which, under many conditions, appears absolutely required for insulin to stimulate hexose uptake into adipocytes. Akt/PKB, a serine/threonine protein kinase activated by insulin in a phosphatidylinositide 3'-kinase-dependent manner, has been implicated as a critical mediator of insulin's actions on metabolism and cell survival. Nonetheless, Akt/PKB's role in many insulin effects, particularly accelerated glucose transport, remains controversial. Interestingly, soluble analogues of ceramide antagonize both insulin's activation of Akt/PKB as well as its stimulation of glucose transport, consistent with a causal relationship between the two.


Subject(s)
Ceramides/adverse effects , Glucose/metabolism , Insulin/metabolism , Muscle Proteins , Phosphatidylinositol 3-Kinases/metabolism , Protein Serine-Threonine Kinases/metabolism , Proto-Oncogene Proteins/metabolism , Signal Transduction , Animals , Biological Transport, Active , Diabetes Mellitus, Type 2/metabolism , Glucose Transporter Type 4 , Humans , Monosaccharide Transport Proteins/metabolism , Proto-Oncogene Proteins c-akt , Substrate Specificity
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