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1.
Commun Biol ; 3(1): 465, 2020 08 21.
Article in English | MEDLINE | ID: mdl-32826979

ABSTRACT

Sarcoidosis is a genetically complex systemic inflammatory disease that affects multiple organs. We present a GWAS of a Japanese cohort (700 sarcoidosis cases and 886 controls) with replication in independent samples from Japan (931 cases and 1,042 controls) and the Czech Republic (265 cases and 264 controls). We identified three loci outside the HLA complex, CCL24, STYXL1-SRRM3, and C1orf141-IL23R, which showed genome-wide significant associations (P < 5.0 × 10-8) with sarcoidosis; CCL24 and STYXL1-SRRM3 were novel. The disease-risk alleles in CCL24 and IL23R were associated with reduced CCL24 and IL23R expression, respectively. The disease-risk allele in STYXL1-SRRM3 was associated with elevated POR expression. These results suggest that genetic control of CCL24, POR, and IL23R expression contribute to the pathogenesis of sarcoidosis. We speculate that the CCL24 risk allele might be involved in a polarized Th1 response in sarcoidosis, and that POR and IL23R risk alleles may lead to diminished host defense against sarcoidosis pathogens.


Subject(s)
Chemokine CCL24/genetics , Cytochrome P-450 Enzyme System/genetics , Genetic Predisposition to Disease , Receptors, Interleukin/genetics , Sarcoidosis/etiology , Alleles , Chemokine CCL24/metabolism , Cytochrome P-450 Enzyme System/metabolism , Female , Genetic Association Studies , Genome-Wide Association Study , Genotype , Humans , Japan , Male , Odds Ratio , Polymorphism, Single Nucleotide , Quantitative Trait Loci , Receptors, Interleukin/metabolism , Sarcoidosis/diagnosis , Sarcoidosis/metabolism
2.
Mol Vis ; 18: 512-8, 2012.
Article in English | MEDLINE | ID: mdl-22393278

ABSTRACT

PURPOSE: To investigate whether interleukin 10 (IL10) gene polymorphisms are associated with the development of sarcoidosis in Japanese patients. METHODS: Two hundred and eighty-eight Japanese sarcoidosis patients and 310 Japanese healthy controls were recruited. We genotyped 9 single-nucleotide polymorphisms in IL10 and assessed the allelic diversity between cases and controls. RESULTS: No significant differences in the frequency of IL10 alleles, genotypes, and haplotypes in the sarcoidosis cases compared to the controls were detected. CONCLUSIONS: Our results suggest that IL10 polymorphisms are not significantly related to the pathogenesis of sarcoidosis in the Japanese population.


Subject(s)
Asian People , Eye/metabolism , Interleukin-10/genetics , Polymorphism, Single Nucleotide/genetics , Sarcoidosis/genetics , 5' Untranslated Regions , Alleles , Case-Control Studies , DNA Fingerprinting , Eye/pathology , Gene Frequency , Genotype , Humans , Introns , Linkage Disequilibrium , Sarcoidosis/pathology
3.
Ann Rheum Dis ; 69(4): 747-54, 2010 Apr.
Article in English | MEDLINE | ID: mdl-19684014

ABSTRACT

BACKGROUND: Behçet disease (BD) is a rare, chronic, systemic, inflammatory disorder characterised by recurrent ocular, genital and skin lesions. Although its aetiology is still uncertain, an intricate interplay between the environment (eg, viruses) and the host seems to initiate and/or perpetuate the disease, although the mechanism remains speculative. Since the identification of HLA-B*5101 (and more recently of MICA) as a susceptibility locus for BD, the identification of additional genetic locus/loci, whether inside, or perhaps more importantly outside the MHC has clearly stalled. OBJECTIVE: To carry out a genome-wide association study (GWAS) of BD. METHODS: 300 Japanese patients with BD and an equal number of controls were recruited. The samples were screened using a dense panel of 23 465 microsatellites (MS) covering the entire genome. RESULTS: The six best (of a total of 147) positively associated MS with BD were identified. Of these six, two were located within the human leucocyte antigen (HLA) class I region itself. Although one of these was clearly reminiscent of the association with HLA-B, the second, not in linkage disequilibrium with the former, was in the telomeric side of the class I region and remained to be formally identified. HLA genotyping and haplotype analysis conclusively led to the deciphering of a dual, independent, contribution of two HLA alleles to the pathogenesis of BD: HLA-B*5101 and HLA-A*26. CONCLUSIONS: This GWAS highlights the premier genetic susceptibility locus for BD as the major histocompatibility complex itself, wherein reside two independent loci: HLA-B and HLA-A.


Subject(s)
Behcet Syndrome/genetics , HLA-A Antigens/genetics , HLA-B Antigens/genetics , Case-Control Studies , Gene Frequency , Genetic Predisposition to Disease , Genome-Wide Association Study , Genotype , Haplotypes , Histocompatibility Testing/methods , Humans , Linkage Disequilibrium , Microsatellite Repeats , Phenotype
4.
Blood ; 105(3): 1195-7, 2005 Feb 01.
Article in English | MEDLINE | ID: mdl-15459013

ABSTRACT

Early-onset sarcoidosis (EOS) and inheritable Blau syndrome (BS) share characteristic clinical features of juvenile-onset systemic granulomatosis syndrome that mainly affects skin, joints, and eyes. However, no direct evidence has been shown for the possible common origin of these 2 diseases. Recent discovery of CARD15 mutations in BS families encouraged us to investigate similar CARD15 mutations in EOS patients. Among 10 EOS cases retrospectively collected in Japan, heterozygous missense mutations were found in 9 cases; 4 showed a 1000C>T (R334W in amino acid change) that has been reported in BS, 4 showed novel 1487A>T (H496L), 1538T>C (M513T), 1813A>C (T605P), and 2010C>A (N670K), and 1 case showed double 1146C>G (D382E)/1834G>A (A612T) mutations on different alleles. All 6 of these variants of CARD15 showed increased basal nuclear factor (NF)-kappaB activity. These findings indicate that the majority of EOS and BS cases share the common genetic etiology of CARD15 mutations that cause constitutive NF-kappaB activation.


Subject(s)
Exanthema/genetics , Glaucoma, Angle-Closure/genetics , Intracellular Signaling Peptides and Proteins/genetics , Sarcoidosis/genetics , Age of Onset , Crohn Disease/genetics , Gene Expression Regulation , Humans , Mutation , NF-kappa B/genetics , NF-kappa B/metabolism , Nod2 Signaling Adaptor Protein , Polymorphism, Single Nucleotide/genetics , Syndrome
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