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1.
Biotechnol J ; 16(10): e2100010, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34270173

ABSTRACT

In recent years, many biocatalytic processes have been developed for the production of chemicals and pharmaceuticals. In this context, enzyme immobilization methods have attracted attention for their advantages, such as continuous production and increased stability. Here, enzyme immobilization methods and a collection of nitrilases from biodiversity for the conversion of 3-cyanopyridine to nicotinic acid were screened. Substrate conversion over 10 conversion cycles was monitored to optimize the process. The best immobilization conditions were found with cross-linking using glutaraldehyde to modify the PMMA beads. This method showed good activity over 10 cycles in a batch reactor at 30 and 40°C. Finally, production with a new thermostable nitrilase was examined in a continuous packed bed reactor, showing very high stability of the biocatalytic process at a flow rate of 0.12 ml min-1 and a temperature of 50°C. The complete conversion of 3-cyanopyridine was obtained over 30 days of operation. Future steps will concern reactor scale-up to increase the production rate with reasonable pressure drops.


Subject(s)
Niacin , Aminohydrolases/metabolism , Biocatalysis , Enzymes, Immobilized
2.
Enzyme Microb Technol ; 83: 7-13, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26777245

ABSTRACT

It is well known that washing whole-cells containing enzyme activities after fermentation, but prior to biocatalysis can improve their activity in the subsequent reaction. In this paper, we quantify the impact of both the fermentation media and cell washing on the performance of whole-cell biocatalysis. The results are illustrated using a recombinant monoamine oxidase (expressed in Escherichia coli, used in resting state) for the oxidative desymmetrization of 3-azabicyclo[3,3,0]octane. It was shown that the need for washing biocatalyst prior to use in a reaction is dependent upon growth medium. Unlike cells grown in LB medium, washing of the cells was essential for cells grown on TB medium. With TB media, washing the cells improved the final conversion by approximately a factor of two. Additionally, over 50-fold improvement was achieved in initial activity. A potential reason for this improvement in activity was identified to be the increase in transfer of substrates across the cell membrane as a result of cell washing.


Subject(s)
Aza Compounds/chemistry , Aza Compounds/metabolism , Azabicyclo Compounds/chemistry , Azabicyclo Compounds/metabolism , Monoamine Oxidase/metabolism , Octanes/chemistry , Octanes/metabolism , Biocatalysis , Culture Media , Escherichia coli/growth & development , Escherichia coli/metabolism , Fermentation , Industrial Microbiology , Kinetics , Oxidation-Reduction , Recombinant Proteins/metabolism
3.
Appl Microbiol Biotechnol ; 99(3): 1229-36, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25104031

ABSTRACT

This work demonstrates the first example of the immobilisation of MAO-N whole cells to produce a biocatalyst that remained suitable for repetitive use after 11 months of storage and stable up to 15 months after immobilisation. The production of Escherichia coli expressing recombinant MAO-N was scaled up to bioreactors under regulated, previously optimised conditions (10% DO, pH 7), and the amount of biomass was almost doubled compared to flask cultivation. Subsequently, pilot immobilisation of the whole-cell biocatalyst using LentiKats technology was performed. The amount of the immobilised biomass was optimised and the process was scaled up to a production level by immobilising 15 g of dry cell weight per litre of polyvinyl alcohol to produce 3 kg of whole-cell ready-to-use biocatalyst. The immobilised biocatalyst retained its initial activity over six consecutive biotransformations of the secondary amine model compound 3-azabicylo [3,3,0]octane, a building block of the hepatitis C drug telaprevir. Consecutive cultivation cycles in growth conditions not only increased the initial specific activity of biocatalyst produced on the industrial plant by more than 30%, but also significantly increased the rate of the biotransformation compared to the non-propagated biocatalyst.


Subject(s)
Cells, Immobilized/metabolism , Monoamine Oxidase/metabolism , Biogenic Monoamines/metabolism , Bioreactors/microbiology , Escherichia coli/enzymology , Escherichia coli/genetics , Escherichia coli/metabolism , Hydrogen-Ion Concentration , Monoamine Oxidase/genetics , Oxidation-Reduction , Recombinant Proteins/genetics , Recombinant Proteins/metabolism
4.
J Agric Food Chem ; 61(26): 6161-6, 2013 Jul 03.
Article in English | MEDLINE | ID: mdl-23789631

ABSTRACT

The degradation of environmentally long-term aged (22 years) ¹4C-labeled atrazine residues in soil stimulated by inoculation with atrazine-adapted soil from Belgium, the United States (U.S.), and Brazil at two different moisture regimes (50% WHCmax/slurried conditions) was evaluated. Inoculation of the soil containing the aged ¹4C-labeled atrazine residues with 5, 50, and 100% (w/w) Belgian, U.S., or Brazilian atrazine-adapted soil increased ¹4C-atrazine residue mineralization by a factor of 3.1-13.9, depending upon the amount of atrazine-adapted soil inocula and the moisture conditions. Aged ¹4C-atrazine residue mineralization varied between 2 and 8% for Belgian and between 1 and 2% for U.S. and Brazilian soil inoculum at 50% WHCmax but was increased under slurried conditions, accounting for 8-10% (Belgian soil), 2-7% (Brazilian soil), and 3% (American soil). The results show that an increased degradation of long-term aged ¹4C-labeled atrazine residues is possible by the transfer of atrazine-adapted soil microflora from different soils and regions to non-adapted soil.


Subject(s)
Atrazine/chemistry , Herbicides/chemistry , Pesticide Residues/chemistry , Soil Microbiology , Soil/chemistry , Atrazine/analysis , Atrazine/metabolism , Carbon Radioisotopes , Gram-Negative Bacteria/growth & development , Gram-Negative Bacteria/isolation & purification , Gram-Negative Bacteria/metabolism , Gram-Positive Bacteria/growth & development , Gram-Positive Bacteria/isolation & purification , Gram-Positive Bacteria/metabolism , Herbicides/analysis , Herbicides/metabolism , Kinetics , Minerals/analysis , Minerals/chemistry , Minerals/metabolism , Pesticide Residues/analysis , Pesticide Residues/metabolism , Soil Pollutants/analysis , Soil Pollutants/chemistry , Soil Pollutants/metabolism
5.
Appl Microbiol Biotechnol ; 97(4): 1441-55, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23296498

ABSTRACT

Immobilization is one of the great tools for developing economically and ecologically available biocatalysts and can be applied for both enzymes and whole cells. Much research dealing with the immobilization of Escherichia coli has been published in the past two decades. E. coli in the form of immobilized biocatalyst catalyzes many interesting reactions and has been used mainly in laboratories, but also on an industrial scale, leading to the production of valuable substances. It has the potential to be applied in many fields of modern biotechnology. This paper aims to give a general overview of immobilization techniques and matrices suitable mostly for entrapment, encapsulation, and adsorption, which have been most frequently used for the immobilization of E. coli. An extensive analysis reviewing the history and current state of immobilized E. coli catalyzing different types of biotransformations is provided. The review is organized according to the enzymes expressed in immobilized E. coli, which were grouped into main enzyme classes. The industrial applications of immobilized E. coli biocatalyst are also discussed.


Subject(s)
Escherichia coli/metabolism , Industrial Microbiology , Biocatalysis , Cells, Immobilized/chemistry , Cells, Immobilized/metabolism , Escherichia coli/chemistry , Escherichia coli/genetics , Gene Expression
6.
J Agric Food Chem ; 61(3): 512-6, 2013 Jan 23.
Article in English | MEDLINE | ID: mdl-23265348

ABSTRACT

Biochar addition to soil has been reported to reduce the microbial degradation of pesticides due to sorption of the active compound. This study investigated whether the addition of hardwood biochar alters the mineralization of (14)C-labeled atrazine in two atrazine-adapted soils from Belgium and Brazil at different moisture regimens. Biochar addition resulted in an equally high or even in a significantly higher atrazine mineralization compared to the soils without biochar. Statistical analysis revealed that the extent of atrazine mineralization was more influenced by the specific soil than by the addition of biochar. It was concluded that biochar amendment up to 5% by weight does not negatively affect the mineralization of atrazine by an atrazine-adapted soil microflora.


Subject(s)
Atrazine/chemistry , Charcoal/chemistry , Soil/chemistry , Belgium , Biodegradation, Environmental , Brazil , Pesticides/chemistry , Soil Microbiology , Soil Pollutants/chemistry
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