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1.
Vet Anim Sci ; 17: 100266, 2022 Sep.
Article in English | MEDLINE | ID: mdl-35957660

ABSTRACT

Longevity-related genes have been found in humans, mice, dogs and in several other animal species. The goal of this study was to perform genetic analysis of long-lived European bisons with the aim to find genes that are associated with longevity using GWAS and further sequencing of a wider sample panel. European bison has a unique history of near extinction and the recovery of the species from just a few founder individuals. Together with the short medium lifespan, the expected genetic homogeneity makes bison a suitable model for studying longevity. Particular single nucleotide polymorphisms within three genes, BCKDHB, FER1L6 and SERPINI2, were found significantly overrepresented in long-lived European bisons. In SERPINI2, the longevity-associated single nucleotide polymorphism localizes to an exon. In the protein encoded by the SERPINI2 gene, amino acid leucine present in the reference European bisons is replaced by tryptophan in the long-lived animals. This study is the first to determine longevity-associated variants in genes in European bison. Association of the FER1L6 gene with longevity shows a possible sex dependency.

2.
Protein Expr Purif ; 137: 34-42, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28651974

ABSTRACT

A laccase of the basidiomycete Pleurotus pulmonarius (PpuLcc) possessed strong decolorizing abilities towards artificial and natural dyes. The PpuLcc was purified from the culture supernatant via FPLC, and the corresponding gene cloned and expressed in Pichia pastoris GS115. To examine the impact of the C-terminal tail region and the signal peptide on the recombinant expression of PpuLcc, a non-modified version or different truncations (-2, -5, -13 AA) of the target protein were combined with different secretion signals. Heterologous expression of codon optimized constructs resulted in extracellular activities of the PpuLcc variants of up to 7000 U L-1 (substrate ABTS) which was six times higher than non-codon optimized constructs. In contrast to previous works, altering the C-terminal end of the protein did not influence kinetic parameters or the rate of expression. The His-Tag purified enzymes showed high temperature optima (50-70 °C) and thermo stability. All of the recombinant variants degraded triarylmethane and azo dyes. Rapid bleaching of ß-carotene (E 160a) and the polyene acid norbixin (E 160b) using a laccase was found for the first time. Thus, the enzyme may be useful in decolorizing unwanted polyene pigments, for example from the processing of cheese, bakery, desserts, ice cream or coloured casings.


Subject(s)
Coloring Agents/chemistry , Fungal Proteins , Laccase , Pichia/metabolism , Pleurotus/genetics , Carotenoids/chemistry , Fungal Proteins/biosynthesis , Fungal Proteins/chemistry , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Laccase/biosynthesis , Laccase/chemistry , Laccase/genetics , Laccase/isolation & purification , Pichia/chemistry , Pichia/genetics , Pleurotus/enzymology , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , beta Carotene/chemistry
3.
Biotechnol Appl Biochem ; 63(6): 852-862, 2016 Nov.
Article in English | MEDLINE | ID: mdl-26272349

ABSTRACT

The feruloyl esterase (FAE) gene EST1 from the basidiomycete Pleurotus sapidus was heterologously expressed in Escherichia coli and Pichia pastoris. Catalytically active recombinant Est1 was secreted using P. pastoris as a host. For expression in P. pastoris, the expression vector pPIC9K was applied. The EST1 gene was cloned with an N-terminal α-mating factor pre-pro sequence and expressed under the control of a methanol inducible alcohol oxidase 1 promotor. Est1 was purified to homogeneity using ion exchange and hydrophobic interaction chromatography. The recombinant Est1 showed optima at pH 5.0 and 50 °C, and released ferulic acid from saccharide esters and from the natural substrate destarched wheat bran. Substrate specificity profile and descriptor-based analysis demonstrated unique properties, showing that Est1 did not fit into the current FAE classification model. Transferuloylation synthesis of feruloyl-saccharide esters was proven for mono- and disaccharides.


Subject(s)
Carboxylic Ester Hydrolases/genetics , Carboxylic Ester Hydrolases/metabolism , Coumaric Acids/chemistry , Esters/chemistry , Maltose/biosynthesis , Maltose/chemistry , Pleurotus/enzymology , Carboxylic Ester Hydrolases/biosynthesis , Carboxylic Ester Hydrolases/isolation & purification , Escherichia coli/genetics , Genetic Engineering , Genetic Vectors/genetics , Hydroxybenzoates/metabolism , Kinetics , Pichia/genetics , Pleurotus/genetics , Recombinant Proteins/biosynthesis , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Substrate Specificity , Triticum/chemistry
4.
Biotechnol Adv ; 32(8): 1382-95, 2014 Dec.
Article in English | MEDLINE | ID: mdl-25193252

ABSTRACT

Many enzymes from basidiomycota have been identified and more recently characterized on the molecular level. This report summarizes the potential biotechnological applications of these enzymes and evaluates recent advances in their heterologous expression in Escherichia coli. Being one of the most widely used hosts for the production of recombinant proteins, there are, however, recurrent problems of recovering substantial yields of correctly folded and active enzymes. Various strategies for the efficient production of recombinant proteins from basidiomycetous fungi are reviewed including the current knowledge on vectors and expression strains, as well as methods for enhancing the solubility of target expression products and their purification. Research efforts towards the refolding of recombinant oxidoreductases and hydrolases are presented to illustrate successful production strategies.


Subject(s)
Basidiomycota/enzymology , Enzymes/biosynthesis , Escherichia coli/metabolism , Fungal Proteins/biosynthesis , Recombinant Proteins/biosynthesis , Basidiomycota/genetics , Enzymes/chemistry , Enzymes/genetics , Escherichia coli/genetics , Fungal Proteins/chemistry , Fungal Proteins/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/genetics
5.
Protein Expr Purif ; 95: 233-9, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24440506

ABSTRACT

The first heterologous expression of an iron-containing lipoxygenase from a basidiomycete in Pichia pastoris is reported. Five different expression constructs of the lipoxygenase gene LOX1 from Pleurotus sapidus were cloned and successfully transferred into P. pastoris SMD1168, but only one pPIC9K vector construct was functionally expressed. In this construct the vector-provided α-factor signal sequence was replaced by insertion of a second Kozak sequence between the signal sequence and the LOX1 gene. His(+) transformants were screened for their level of resistance to geneticin (G418). Lox1 was expressed under different culture conditions and purified using the N-terminal His-tag. Relative enzyme activity increased significantly 48h after methanol induction and was highest with 2mll(-1) inducer. The recombinant enzyme showed an optimal lipoxygenase activity at pH 7 and 30-35°C and a vmax like the wild-type enzyme.


Subject(s)
Fungal Proteins/metabolism , Lipoxygenase/metabolism , Pichia/metabolism , Pleurotus/genetics , Recombinant Proteins/metabolism , Fungal Proteins/chemistry , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Hydrogen-Ion Concentration , Lipoxygenase/chemistry , Lipoxygenase/genetics , Lipoxygenase/isolation & purification , Mass Spectrometry , Pichia/genetics , Pleurotus/enzymology , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Solubility , Temperature
6.
Biotechnol Appl Biochem ; 60(2): 147-54, 2013.
Article in English | MEDLINE | ID: mdl-23600571

ABSTRACT

The pfah2 gene coding for a novel hydrophobin PfaH2 from the ascomycete Paecilomyces farinosus was identified during sequencing of random clones from a cDNA library. The corresponding protein sequence of PfaH2 deduced from the cDNA comprised 134 amino acids (aa). A 16 aa signal sequence preceded the N-terminus of the mature protein. PfaH2 belonged to the class Ia hydrophobins. The protein was isolated using trifluoroacetic acid extraction and purified via SDS-PAGE and high-performance liquid chromatography. The surface activity of the recently described PfaH1 and of PfaH2 was compared by the determination of contact angles (CAs) on glass slides and Teflon tape, and the CA of distilled water droplets was measured on glass slides coated with hydrophobin PfaH1 or PfaH2. Surprisingly, both hydrophobins adsorbed to hydrophilic surfaces and changed their physicochemical properties to a similar quantitative extent, although little aa sequence homology was found.


Subject(s)
Fungal Proteins/metabolism , Paecilomyces/metabolism , Amino Acid Sequence , Base Sequence , Chromatography, High Pressure Liquid , Computational Biology , DNA, Complementary , Electrophoresis, Polyacrylamide Gel , Fungal Proteins/chemistry , Fungal Proteins/genetics , Molecular Sequence Data , Phylogeny , Tandem Mass Spectrometry
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