The African Light Source: history, context and future.

The African Light Source (AfLS) project is now almost eight years old. This article assesses the history, current context and future of the project. There is by now considerable momentum in building the user community, including deep training, facilitating access to current facilities, growing the scientific output, scientific networks and growing the local laboratory-scale research infrastructure. The Conceptual Design Report for the AfLS is in its final editing stages. This document specifies the socio-economic and scientific rationales and the technical aspects amongst others. The AfLS is supported by many national and Pan-African scientific professional bodies and voluntary associates across many scientific disciplines, and there are stakeholders throughout the continent and beyond. The current roadmap phases have expanded to include national and Pan-African level conversations with policy makers through new Strategic Task Force groups. The document summarizes this progress and discusses the future of the project.

Influence of Intramineral Proteins on the Growth of Carbonate Crystals Using as a Scaffold Membranes of Ratite Birds and Crocodiles Eggshells.

The lack of information on structural basis where proteins are involved, as well as the biomineralization processes of different systems such as bones, diatom frustules, and eggshells, have intrigued scientists from different fields for decades. This scientific curiosity has led to the use of methodologies that help understand the mechanism involved in the formation of these complex structures. Therefore, this work focuses on the use of eggshell membranes from different species of ratites (emu and ostrich) and reptiles (two species of crocodiles) as a model to differentiate biocalcification and biosilicification by introducing calcium phosphate or silica inside the membrane fiber mantles. We performed this to obtain information about the process of eggshell formation as well as the changes that occur in the membrane during crystal formation. In order to identify and understand the early processes leading to the formation of the microstructures present in the eggshell, we decided to carry out the synthesis of silica-carbonate of calcium, barium, and strontium called biomorph in the presence of intramineral proteins. This was carried out to evaluate the influence of these proteins on the formation of specific structures. We found that the proteins on untreated membranes, present a structural growth similar to those observed in the inner part of the eggshell, while in treated membranes, the structures formed present a high similarity with those observed in the outer and intermediate part of the eggshell. Finally, a topographic and molecular analysis of the biomorphs and membranes was performed by scanning electron microscopy (SEM), Raman and Fourier-transform Infrared (FTIR) spectroscopies.

Removal of fluoroquinolone contaminants from environmental waters on sepiolite and its photo-induced regeneration.

Sepiolite is studied as sorbent for removal of Fluoroquinolone (FQ) contaminants from water. Marbofloxacin (MAR) and Enrofloxacin (ENR) were chosen as model FQs since they are the two most commonly employed veterinary FQs in livestock farming in northern Italy. Adsorption experiments on two sepiolites (SP-1 and SSE16) were carried out in tap water at pH 7.5 to better mimic real conditions. The sorption experimental data were fitted by Freundlich, Langmuir and S-Logistic1 models. The latter better described MAR and ENR adsorptions. Adsorption capacities of SP-1 and SSE16, respectively, were 132 mg g(-1) and 121 mg g(-1) for MAR, and 112 mg g(-1) and 93 mg g(-1) for ENR. X-ray powder diffraction, performed on clay samples enriched with each FQ and on the pristine clays, showed no substantial differences between the two sepiolites and evidenced no significant structural changes after FQs uptake, as also verified by infrared spectroscopy. This indicates that adsorption occurs only on the external surface of the mineral and not in the intracrystalline microporosity, likely due to the interaction between the FQ carboxylic group and the sepiolite surface. For the first time solid-state photodegradation of the adsorbed FQs was investigated for regenerating the sorbent. Results showed that the adsorbed drugs are effectively photodegraded by solar light, thus allowing sepiolite to be reused. The efficiency of this material for remediation of contaminated water was proved on ditch water, collected downstream a swine farm, containing some tens of ng L(-1) of MAR and ENR.

Cooperative Jahn-Teller effect and the role of strain in the tetragonal-to-cubic phase transition in Mg x Cu1 - x Cr2O4.

Temperature and composition dependences of the I41/amd → [Formula: see text] phase transition in the Mg x Cu1 - x Cr2O4 spinel solid solution, due to the melting of the cooperative Jahn-Teller distortion, have been studied by means of single-crystal X-ray diffraction. Crystals with x = 0, 0.10, 0.18, 0.43, 0.46, 0.53, 1 were grown by flux decomposition methods. All crystals have been refined in the tetragonal I41/amd space group except for the Mg end-member, which has cubic symmetry. In Mg x Cu1 - x Cr2O4 the progressive substitution of the Jahn-Teller, d9 Cu2+ cation with spherical and closed-shell Mg2+ has a substantial effect on the crystal structure, such that there is a gradual reduction of the splitting of a and c unit-cell parameters and flattening of the tetrahedra. Single-crystal diffraction data collected in situ up to T = 1173 K show that the tetragonal-to-cubic transition temperature decreases with increasing Mg content. The strength of the Cu-Cu interaction is, in effect, modulated by varying the Cu/Mg ratio. Structure refinements of diffraction data collected at different temperatures reveal that heating results in a gradual reduction in the tetrahedron compression, which remains significant until near the transition temperature, however, at which point the distortion of the tetrahedra rapidly vanishes. The spontaneous strain arising in the tetragonal phase is large, amounting to 10% shear strain, et, and ∼ 1% volume strain, Vs, in the copper chromite end-member at room temperature. Observed strain relationships are consistent with pseudoproper ferroelastic behaviour ([Formula: see text] ∝ Vs ∝ [Formula: see text], where qJT is the order parameter). The I41/amd → [Formula: see text] phase transition is first order in character for Cu-rich samples and then evolves towards second-order character. Although a third order term is permitted by symmetry in the Landau expansion, this behaviour appears to be more accurately represented by a 246 expansion with a change from negative to positive values of the fourth-order coefficient with progressive dilution of the Jahn-Teller cation.

Benzoyl radicals from (hetero)aromatic aldehydes. Decatungstate photocatalyzed synthesis of substituted aromatic ketones.

Benzoyl radicals are generated directly from (hetero)aromatic aldehydes upon tetrabutylammonium decatungstate ((n-Bu(4)N)(4)W(10)O(32)), TBADT) photocatalysis under mild conditions. In the presence of alpha,beta-unsaturated esters, ketones and nitriles radical conjugate addition ensues and gives the corresponding beta-functionalized aryl alkyl ketones in moderate to good yields (stereoselectively in the case of 3-methylene-2-norbornanone). Due to the mild reaction conditions the presence of various functional groups on the aromatic ring is tolerated (e.g. methyl, methoxy, chloro). The method can be applied to hetero-aromatic aldehydes whether electron-rich (e.g. thiophene-2-carbaldehyde) or electron-poor (e.g. pyridine-3-carbaldehyde).

Micro-XANES mapping of buried interfaces: pushing microbeam techniques to the nanoscale.

A specific preparation procedure makes possible to obtain in one shot structural and compositional characterization of a buried interface at the nanometre scale using a micrometre scale probe. A specific example based on dispersive mu-XAS, micro X-ray absorption spectroscopy, shows that nearly-atomic scale changes in local structure, composition, as well as local disorder are faithfully detected. The approach could in principle be applied to any probe with a micrometric resolution.

Structural elucidation of phototransformation products of azimsulfuron in water.

The photodegradation of the sulfonylurea herbicide azimsulfuron, N-[[(4,6-dimethoxypyrimidin-2-yl)amino]carbonyl]-1-methyl-4-(2-methyl-2H-tetrazole-5-yl)-1H-pyrazole-5-sulfonamide (AZS), was studied in water at different wavelengths and in the presence of photocatalysts. AZS was rapidly degraded by UV light, affording three photoproducts. The main product, accounting for about 70% of photodegraded herbicide, was identified as 6-amino-5-[(4,6-dimethoxypyrimidin-2-yl)methylamino]-1,5,6,8-tetrahydro-7-oxa-8lambda(6)-tia-1,2,5,6-tetraza-azulen-4-one (ADTA) by single-crystal X-ray diffraction. With simulated sunlight irradiation, the reaction was slower and 2-amino-4,6-dimethoxypyrimidine (DPA) and 1-methyl-4-(2-methyl-2H-tetrazole-5-yl)-1H-pyrazole-5-sulfonamide (MPS), arising from a photohydrolytic cleavage of the sulfonylurea bridge, were the only byproducts observed. The reactions followed first-order kinetics. The addition of dissolved organic matter (DOM) did not modify significantly the AZS photodegradation rate. The presence of Fe2O3 accelerated more than twice the reaction rate affording two major products, DPA and MPS, together with minor amounts of N-[[(5-hydroxy-4,6-dimethoxypyrimidin-2-yl)amino]carbonyl]-1-methyl-4-(2-methyl-2H-tetrazole-5-yl)-1H-pyrazole-5-sulfonamide (AZS-OH). The greatest degradation rate was detected in the presence of TiO2. Only the photohydroxylation product AZS-OH was observed, which was transformed rapidly into oxalic acid.

Cucurbitane triterpenoids from Leucopaxillus gentianeus.

In addition to the known bioactive triterpene cucurbitacin B (1), two new cucurbitane triterpenoids, namely, leucopaxillones A (3) and B (4), exhibiting a new oxygenation pattern among cucurbitacins, have been isolated from the mushroom Leucopaxillus gentianeus (syn. L. amarus). Cucurbitacin B (1) imparts a bitter taste to the flesh of the fungus; however, it occurs in the fruiting bodies mainly esterified as tasteless fatty acid esters 2a-c. In vitro growth inhibitory effects of compounds 1-4 on proliferation of four different human tumor cell lines (A549, CAKI-1, HepG2, MCF-7) were evaluated by using a 1-day MTT assay. Only cucurbitacin B was highly active on all lines. Free cucurbitacin B is presumed to be formed in vivo by an enzyme-mediated scission of esters 2a-c, thus constituting a chemical weapon that protects the mushrooms against parasites and predators. Compounds 1-4 are structurally different from the other few cucurbitacins isolated from Basidiomycetes, being, instead, more similar to those occurring in plants. In particular, cucurbitacin B (1) seems to represent an interesting example of secondary metabolite convergence between distant taxa such as fungi and vascular plants, where they likely exert a similar role of protection. The structures of the compounds were established by means of spectroscopic methods and X-ray diffraction on a single crystal. The absolute configuration of leucopaxillone A has been assigned on the basis of CD chirality rules.

The influence of the boat-to-chair conversion on the demetallation of the nickel(II) complex of an open-chain tetramine containing a piperazine fragment.

The nickel(II) complex with an open chain tetramine containing a piperazine fragment (1) displays an unusual resistance to demetallation in acidic solution and exhibits a lifetime of about five minutes in a solution 0.1 M in HClO4 and 7.0 M in NaClO4. Sluggishness with respect to the demetallation is ascribed to the occurrence of the boat-to-chair conformational conversion of the piperazine fragment, which implies the passage through the highly energetic half-boat transition state. The use of a high concentration of the inert electrolyte induces a 'salting out' effect on both thermodynamics (stability of metal complexes is enhanced) and kinetics (resistance to demetallation is increased).

Does a reinforced kinetic macrocyclic effect exist? the demetallation in strong acid of copper(II) Complexes with open and cyclic tetramines containing a piperazine fragment.

The demetallation in acidic solution of the Cu(II) complexes with open-chain and cyclic tetramines containing a piperazine unit (2 and 3) has been investigated in terms of its kinetic aspects and compared with the behaviour of unsubstituted counterparts (tetramines 1 and 4). The presence of the piperazine fragment slows demetallation of the open-chain-ligand complex owing to the activation barrier associated with the conformational change from boat-to-half-boat; however, it does not affect the demetallation of the macrocyclic complex, which involves the spontaneous boat-to-twist conformational change. Thus, lateral reinforcement of a cyclam-like ligand does not add any further contribution to the typical inertness in demetallation of macrocyclic complexes.

C2 symmetrical double chromophores: cooperativity effects in lanthanide ion complexation.

We describe the synthesis and characterization of C(2) symmetrical double chromophores, in which two identical chromophores are linked through ethylene glycol spacers of increasing lengths. The complexation ability of the trans stereopure form for each diastereoisomeric pair showed how the two chromophores, when the spacer unit is comprised of a diethylene or a triethylene glycol moiety, are able to interact in a positive way, stabilizing the resulting complexes when compared with single chromophore analogous compounds.

Bistable copper complexes of bis-thia-bis-quinoline ligands.

The new ligands R,R-trans-S,S'-bis[methyl(2'-quinolyl)]-1,2-dithiacyclohexane, cis-S,S'-bis[methyl(2'-quinolyl)]-1,2-dithiacyclohexane, and 1,6-bis(2'-quinolyl)-2,5-dithiahexane have been synthesized and their complexes with Cu(I) and Cu(II) prepared. The ligand/metal systems are bistable, as the complexes with copper in both its oxidation states are stable under the same conditions as solids and in solution. The crystal and molecular structure of [Cu(I)(1,6-bis(2'-quinolyl)-2,5-dithiahexane)]ClO(4) has been determined by X-ray diffraction and reveals that the complex is monomeric, with the ligand folding around the Cu(+) cation, imparting to it a tetrahedral coordination. UV-vis, MS-ESI, and NMR data indicate that the same is found for the Cu(I) complexes of all three ligands. Also, the Cu(II) complexes are monomeric, but with a square arrangement of the ligands around Cu(2+). On changing the oxidation state, the change in the geometrical arrangement is fast and complete in less than 80 ms, as demonstrated by cyclic voltammetry experiments. In the CV profiles, the oxidation and reduction events take place at separated E(ox) and E(red) values, with no return wave even at the fastest scan rates. In the E(ox)-E(red) interval (which ranges from 450 to 650 mV, depending on the ligand), the ligand/copper system can thus exist in one of its two states, depending on its history, and thus display electrochemical hysteretical behavior. The electrochemical cycle leading from the tetrahedral [Cu(I)(ligand)](+) to the square [Cu(II)(ligand)](2+) complex (and vice versa) is reversible and repeatable without degradation, as checked by coupled UV-vis-controlled potential coulometry experiments.

Molecular motions in the solid state: the thermochromic nitro-nitrito Interconversion in nickel(II) bis(diamine) complexes.

The NO(2)(-) ion, in the trans-octahedral [Ni(II)(N,N'-dimethylethylenediamine)(2)(NO(2))(2)](H(2)O) complex, coordinates the metal through the nitrogen atom (nitro form). On heating the solid complex, the anion rotates to give nitrito coordination (oxygen bound), according to a reversible process. The coordination mode of NO(2)(-) to Ni(II) is related to the steric interplay between the anion and the alkyl substituents on the diamine.

Light-emitting molecular machines: pH-induced intramolecular motions in a fluorescent nickel(II) scorpionate complex.

A cyclam-like macrocycle has been synthesized with a pendant arm containing a dansylamide group. In the corresponding nickel(II) complex, binding of the pendant arm to the metal is pH controlled. In particular, at pH 4.3, the sulfonamide group deprotonates and coordinates the NiII center, giving rise to a complex of trigonal bipyramidal stereochemistry, as shown by X-ray diffraction studies performed on the crystalline complex salt. At pH 7.5, an OH- ion binds the metal and a six-coordinate species forms. The binding-detachment of the pendant arm to/from the NiII center is signaled by changes in the emission properties of the dansyl subunit in the side chain; the fluorescence of this side chain is high when the pendant arm is not coordinated and low when the sulfonamide group is bound to the metal. The system investigated represents the prototype of a light-emitting molecular machine, driven by a pH change.

Water soluble molecular switches of fluorescence based on the Ni(III)/Ni(II) redox change.

The water soluble Ni(II) complexes of the cyclam derivatives with 1,3-benzodioxole and 1,2,3-trimethoxybenzene display the fluorescent emission typical of the covalently linked fluorophores, which results from a charge transfer excited state. On oxidation to Ni(III), the fluorescence is completely quenched due to the occurrence of an electron transfer (eT) process from the excited fluorogenic fragment Fl to the oxidized metal. Thus, fluorescence can be switched off/on at will, for several cycles, by consecutively oxidizing and reducing the metal center, in controlled potential electrolysis experiments both in acetonitrile and in aqueous 0.1 M HClO4. Occurrence of an eT process from Fl to Ni(III) ultimately depends upon the easy oxidation of Fl to Fl+, whereas failure of the occurrence of an eT process from Ni(II) to Fl has to be ascribed to the particular resistance of Fl fragments to the reduction.