Co-inoculation effects of B. licheniformis and P. aeruginosa on soil Cd and As availability and rice accumulation.

There have been studies reporting the effects of multiple bacterial strains on the Cd/As immobilization and transformation in culture media. However, there is limited research to validate the effects of microbial strain combination on plant Cd/As accumulation and antioxidant system in the soil-plant system. By planting the rice (Zhefu 7) with the co-inoculation of bacterial strains (i.e. Bacillus licheniformis and Pseudomonas aeruginosa) after two months with the contaminations of Cd (2 mg/kg), As (80 mg/kg) and Cd + As (2 + 80 mg/kg), we found that the bacterial co-inoculation decreased Cd concentrations in the rhizosphere soil porewater, but had limited effects on mitigating plant Cd accumulation. By contrast, the co-inoculation did not affect the As(III) and As(V) concentrations in the rhizosphere soil porewater, but decreased As(III) and As(V) concentrations by 17% and 17% in the root respectively and by 17% and 37% in rice shoot respectively. Using DNA sequencing, we found the increased abundance in both exogenous Bacillus licheniformis and native microorganisms, indicating that the added strains had synergetic interactions with soil native microorganisms. Regarding on plant antioxidant enzyme system, the bacterial co-inoculation decreased the concentrations of superoxide dismutase (SOD), hydrogen peroxide (H2O2) and malondialdehyde (MDA) by 75%, 74% and 22%, mitigating the As damage to rice root and promote plant growth. However, under Cd and As co-stress, the effects of co-inoculation on mitigating plant As accumulation and enhancing plant stress resistance appear to be diminished. Our findings underscore the importance of microbial co-inoculation in reducing plant As accumulation and preserving plant health under heavy metal stress.

Metallic micronutrients are associated with the structure and function of the soil microbiome.

The relationship between metallic micronutrients and soil microorganisms, and thereby soil functioning, has been little explored. Here, we investigate the relationship between metallic micronutrients (Fe, Mn, Cu, Zn, Mo and Ni) and the abundance, diversity and function of soil microbiomes. In a survey across 180 sites in China, covering a wide range of soil conditions the structure and function of the soil microbiome are highly correlated with metallic micronutrients, especially Fe, followed by Mn, Cu and Zn. These results are robust to controlling for soil pH, which is often reported as the most important predictor of the soil microbiome. An incubation experiment with Fe and Zn additions for five different soil types also shows that increased micronutrient concentration affects microbial community composition and functional genes. In addition, structural equation models indicate that micronutrients positively contribute to the ecosystem productivity, both directly (micronutrient availability to plants) and, to a lesser extent, indirectly (via affecting the microbiome). Our findings highlight the importance of micronutrients in explaining soil microbiome structure and ecosystem functioning.