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1.
PLoS One ; 19(5): e0298299, 2024.
Article in English | MEDLINE | ID: mdl-38722945

ABSTRACT

Sunflower is one of the four major oil crops in the world. 'Zaoaidatou' (ZADT), the main variety of oil sunflower in the northwest of China, has a short growth cycle, high yield, and high resistance to abiotic stress. However, the ability to tolerate adervesity is limited. Therefore, in this study, we used the retention line of backbone parent ZADT as material to establish its tissue culture and genetic transformation system for new variety cultivating to enhance resistance and yields by molecular breeding. The combination of 0.05 mg/L IAA and 2 mg/L KT in MS was more suitable for direct induction of adventitious buds with cotyledon nodes and the addition of 0.9 mg/L IBA to MS was for adventitious rooting. On this basis, an efficient Agrobacterium tumefaciens-mediated genetic transformation system for ZADT was developed by the screening of kanamycin and optimization of transformation conditions. The rate of positive seedlings reached 8.0%, as determined by polymerase chain reaction (PCR), under the condition of 45 mg/L kanamycin, bacterial density of OD600 0.8, infection time of 30 min, and co-cultivation of three days. These efficient regeneration and genetic transformation platforms are very useful for accelerating the molecular breeding process on sunflower.


Subject(s)
Agrobacterium tumefaciens , Helianthus , Plants, Genetically Modified , Transformation, Genetic , Helianthus/genetics , Helianthus/microbiology , Helianthus/growth & development , Agrobacterium tumefaciens/genetics , Plants, Genetically Modified/genetics , Tissue Culture Techniques/methods , Plant Roots/microbiology , Plant Roots/genetics , Plant Roots/growth & development , Plant Breeding/methods , Crops, Agricultural/genetics , Crops, Agricultural/growth & development
2.
Int J Mol Sci ; 25(7)2024 Apr 07.
Article in English | MEDLINE | ID: mdl-38612905

ABSTRACT

Sunflower (Helianthus annuus L.) is an important, substantial global oil crop with robust resilience to drought and salt stresses. The TGA (TGACG motif-binding factor) transcription factors, belonging to the basic region leucine zipper (bZIP) family, have been implicated in orchestrating multiple biological processes. Despite their functional significance, a comprehensive investigation of the TGA family's abiotic stress tolerance in sunflowers remains elusive. In the present study, we identified 14 TGA proteins in the sunflower genome, which were unequally distributed across 17 chromosomes. Employing phylogenetic analysis encompassing 149 TGA members among 13 distinct species, we revealed the evolutionary conservation of TGA proteins across the plant kingdom. Collinearity analysis suggested that both HaTGA01 and HaTGA03 were generated due to HaTGA08 gene duplication. Notably, qRT-PCR analysis demonstrated that HaTGA04, HaTGA05, and HaTGA14 genes were remarkably upregulated under ABA, MeJA, and salt treatments, whereas HaTGA03, HaTGA06, and HaTGA07 were significantly repressed. This study contributes valuable perspectives on the potential roles of the HaTGA gene family under various stress conditions in sunflowers, thereby enhancing our understanding of TGA gene family dynamics and function within this agriculturally significant species.


Subject(s)
Asteraceae , Helianthus , Helianthus/genetics , Phylogeny , Salt Stress , Biological Evolution
3.
Sci Rep ; 13(1): 16955, 2023 10 07.
Article in English | MEDLINE | ID: mdl-37805641

ABSTRACT

The WRKY family is an important family of transcription factors in plant development and stress response. Currently, there are few reports on the WRKY gene family in safflower (Carthamus tinctorius L.). In this study, a total of 82 CtWRKY genes were identified from the safflower genome and could be classified into 3 major groups and 5 subgroups based on their structural and phylogenetic characteristics. The results of gene structure, conserved domain and motif analyses indicated that CtWRKYs within the same subfamily maintained a consistent exon/intron organization and composition. Chromosomal localization and gene duplication analysis results showed that CtWRKYs were randomly localized on 12 chromosomes and that fragment duplication and purification selection may have played an important role in the evolution of the WRKY gene family in safflower. Promoter cis-acting element analysis revealed that the CtWRKYs contain many abiotic stress response elements and hormone response elements. Transcriptome data and qRT-PCR analyses revealed that the expression of CtWRKYs showed tissue specificity and a strong response to drought stress. Notably, the expression level of the CtWRKY55 gene rapidly increased more than eightfold under drought treatment and rehydration, indicating that it may be a key gene in response to drought stress. These results provide useful insights for investigating the regulatory function of the CtWRKY gene in safflower growth and development, as well as identifying key genes for future molecular breeding programmes.


Subject(s)
Carthamus tinctorius , Transcription Factors , Transcription Factors/metabolism , Carthamus tinctorius/genetics , Multigene Family , Droughts , Phylogeny , Stress, Physiological/genetics , Gene Expression Regulation, Plant , Plant Proteins/metabolism
4.
Anticancer Drugs ; 34(7): 816-826, 2023 08 01.
Article in English | MEDLINE | ID: mdl-36728962

ABSTRACT

BACKGROUND: Circular RNA (circRNA) plays a significant role in cisplatin (DDP) resistance. The purpose of this study was to explore the role of circ_0005667 in DDP resistance of endometrial carcinoma (EC) cells. METHODS: The expression of circular RNA circ_0005667, microRNA-145-5p (miR-145-5p) and insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) in DDP-sensitive and DDP-resistant EC tissues and EC cells was determined by quantitative real-time PCR (qRT-PCR). The expression of apoptosis-related proteins, drug resistance-related proteins and IGF2BP1 proteins were detected by western blot. The half-maximal inhibitory concentration (IC 50 ) of DDP was determined using a cell counting kit-8 (CCK-8) assay. For functional assays, cell proliferation, migration, invasion and cell apoptosis were determined using 5-ethynyl-2'-deoxyuridine (EdU) assay, wound healing assay, transwell assay and flow cytometry assay, respectively. The binding relationship between miR-145-5p and circ_0005667 or IGF2BP1 was verified by dual-luciferase reporter assay. A xenograft experiment was applied to clarify the functional role of circ_0005667 in vivo . RESULTS: Levels of circ_0005667 and IGF2BP1 were markedly increased, whereas miR-145-5p was downregulated in DDP-resistant EC tissues and cells. The circ_0005667 deficiency could enhance DDP sensitivity, inhibit cell proliferation, migration and invasion and promote cell apoptosis in DDP-resistant EC cells in vitro . Mechanistically, circ_0005667 modulated IGF2BP1 expression through sponging miR-145-5p. In addition, miR-145-5p depletion attenuated circ_0005667 silencing-induced effects in EC cells. The regulation of miR-145-5p in DDP resistance involved low IGF2BP1 expression. In vivo experiments revealed that circ_0005667 silencing could improve the sensitivity of the tumor to DDP. CONCLUSION: Circ_0005667 enhanced DDP resistance in EC by elevating IGF2BP1 through sponging miR-145-5p.


Subject(s)
Endometrial Neoplasms , MicroRNAs , Humans , Female , RNA, Circular/genetics , Cisplatin/pharmacology , Endometrial Neoplasms/drug therapy , Endometrial Neoplasms/genetics , Apoptosis , Cell Proliferation , MicroRNAs/genetics , Drug Resistance, Neoplasm/genetics
5.
Int J Mol Sci ; 24(3)2023 Jan 18.
Article in English | MEDLINE | ID: mdl-36768207

ABSTRACT

The UBiA genes encode a large class of isopentenyltransferases, which are involved in the synthesis of secondary metabolites such as chlorophyll and vitamin E. They performed important functions in the whole plant's growth and development. Current studies on UBiA genes were not comprehensive enough, especially for sunflower UBiA genes. In this study, 10 HaUBiAs were identified by domain analysis these HaUBiAs had five major conserved domains and were unevenly distributed on six chromosomes. By constructing phylogenetic trees, 119 UBiA genes were found in 12 species with different evolutionary levels and divided into five major groups, which contained seven conserved motifs and eight UBiA subsuper family domains. Tissue expression analysis showed that HaUBiAs were highly expressed in the roots, leaves, and seeds. By using promoter analysis, the cis-elements of UBiA genes were mainly in hormone signaling and stress responses. The qRT-PCR results showed that HaUBiA1 and HaUBiA5 responded strongly to abiotic stresses. Under ABA and MeJA treatments, HaUBiA1 significantly upregulated, while HaUBiA5 significantly decreased. Under cold stress, the expression of UBiA1 was significantly upregulated in the roots and stems, while UBiA5 expression was increased only in the leaves. Under anaerobic induction, UBiA1 and UBiA5 were both upregulated in the roots, stems and leaves. In summary, this study systematically classified the UBiA family and identified two abiotic stress candidate genes in the sunflower. It expands the understanding of the UBiA family and provides a theoretical basis for future abiotic stress studies in sunflowers.


Subject(s)
Helianthus , Helianthus/genetics , Helianthus/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Phylogeny , Stress, Physiological/genetics , Plant Leaves/genetics , Plant Leaves/metabolism , Gene Expression Regulation, Plant , Multigene Family
6.
Front Plant Sci ; 13: 1026421, 2022.
Article in English | MEDLINE | ID: mdl-36726670

ABSTRACT

Salt and drought are the major abiotic stress factors plaguing plant growth, development and crop yields. Certain abiotic-stress tolerant plants have developed special mechanisms for adapting to adverse environments in the long process of evolution. Elucidating the molecular mechanisms by which they can exert resistance to abiotic stresses is beneficial for breeding new cultivars to guide agricultural production. Halostachys caspica, a perennial halophyte belonging to Halostachys in Amaranthaceae, is extremely tolerant to harsh environments, which is commonly grown in the saline-alkali arid desert area of Northwest, China. However, the molecular mechanism of stress tolerance is unclear. Nuclear Factor Y-A (NFYA) is a transcription factor that regulates the expression of downstream genes in plant response to adverse environments. It has also been reported that some members of the NFYA family are the main targets of miR169 in plants. In this study, we mainly focused on exploring the functions and preliminary mechanism of the miR169b/NFYA1 module from H. caspica to abiotic stress. The main results showed that RLM-RACE technology validated that HcNFYA1 was targeted by HcmiR169b, qRT-PCR revealed that HcmiR169b was repressed and HcNFYA1 was induced in the H. caspica branches under various abiotic stress as well ABA treatment and Arabidopsis stable transformation platform with molecular methods was applied to elucidate that the HcmiR169b/HcNFYA1 module conferred the salt and drought tolerance to plants by enhancing ABA synthesis and ABA signal transduction pathways, maintaining ROS homeostasis and the stability of cell membrane. HcNFYA1 is expected to be a candidate gene to improve plant resistance to salt and drought stresses.

7.
Sci Rep ; 11(1): 19865, 2021 10 06.
Article in English | MEDLINE | ID: mdl-34615898

ABSTRACT

The NAC (NAM, ATAF1/2, and CUC2), is a large family of plant-specific transcription factors (TFs) that exert crucial regulatory roles in various physiological processes and abiotic stresses. There is scanty information on the role of the NAC family in sunflower (Helianthus annuus L.). In this study, we conducted a genome-wide survey and expression analysis of the NAC family in sunflower. A total of 150 HaNACs were identified in sunflower. Phylogenetic analysis to compare HaNACs with Arabidopsis NACs generated 15 clusters. Among them, eight membrane-bound NAC TFs with transmembrane helixes were found (designated as NTLs), which were suggested to be localized in the membrane and transferred to the nucleus through proteolysis. Notably, 12 HaNACs were potentially regulated via miR164 cleavage or translational inhibition. By analyzing RNA-seq data from Sequence Read Archive (SRA), the expression of HaNACs showed tissue specificity and strong response to drought stress. Additionally, phylogenetic analysis of 150 HaNACs with the previously reported NACs related to abiotic stress revealed that 75% of the abiotic stress-related NACs were clustered into the SNAC (abiotic stress-related NAC) group, and only 25% were in the Non-SNAC group. qRT-PCR further demonstrated that about 75% of the HaNACs in the SNAC subgroup were induced by salt and drought stress, and the expression of some HaNACs showed tissue specificity. These findings provide valuable information that can deepen the understanding of how NAC TFs in sunflower respond to abiotic stress.


Subject(s)
Droughts , Gene Expression Regulation, Plant , Helianthus/physiology , Plant Proteins/genetics , Salts , Stress, Physiological , Transcription Factors/genetics , Computational Biology/methods , Evolution, Molecular , Gene Expression Profiling , Genome-Wide Association Study , Molecular Sequence Annotation , Phylogeny , Plant Proteins/metabolism , Transcription Factors/chemistry , Transcription Factors/metabolism
8.
Front Plant Sci ; 12: 638788, 2021.
Article in English | MEDLINE | ID: mdl-34054888

ABSTRACT

The APETALA2 (AP2) and ethylene-responsive element-binding factor (ERF) gene family is one of the largest plant-specific transcription factor gene families, which plays a critical role in plant development and evolution, as well as response to various stresses. The TARGET OF EAT3 (TOE3) gene is derived from Halostachys caspica and belongs to the AP2 subfamily with two AP2 DNA-binding domains. Currently, AP2 family mainly plays crucial roles in plant growth and evolution, yet there are few reports about the role of AP2 in abiotic stress tolerance. Here, we report HcTOE3, a new cold-regulated transcription factor gene, which has an important contribution to freezing tolerance. The main results showed that the expression of HcTOE3 in the H. caspica assimilating branches was strongly induced by different abiotic stresses, including high salinity, drought, and extreme temperature (heat, chilling, and freezing), as well as abscisic acid and methyl viologen treatments. Overexpressing HcTOE3 gene (OE) induced transgenic Arabidopsis plant tolerance to freezing stress. Under freezing treatment, the OE lines showed lower content of malondialdehyde and electrolyte leakage and less accumulation of reactive oxygen species compared with the wild type. However, the survival rates, antioxidant enzyme activities, and contents of osmotic adjustment substance proline were enhanced in transgenic plants. Additionally, the OE lines increased freezing tolerance by up-regulating the transcription level of cold responsive genes (CBF1, CBF2, COR15, COR47, KIN1, and RD29A) and abscisic acid signal transduction pathway genes (ABI1, ABI2, ABI5, and RAB18). Our results suggested that HcTOE3 positively regulated freezing stress and has a great potential as a candidate gene to improve plant freezing tolerance.

9.
Article in Chinese | WPRIM (Western Pacific) | ID: wpr-920479

ABSTRACT

@#[摘 要] 目的:探讨lncRNA ZNF674-AS1在宫颈癌中的作用及其分子机制。方法:用qPCR法检测ZNF674-AS1在31例2019年1月至2020年7月在武汉儿童医院接受手术治疗患者的宫颈癌组织和对应的癌旁组织、宫颈癌细胞系(SiHa、HeLa、C33A和HCC94)和永生化子宫颈上皮细胞系中的表达。转染过表达ZNF674-AS1质粒及其阴性对照质粒至ZNF674-AS1表达最少的HCC94细胞,CCK-8法和Transwell实验检测过表达ZNF674-AS1对HCC94细胞增殖活性和迁移能力的影响。生物信息学方法预测和双荧光素酶报告基因实验验证ZNF674-AS1和miR-510-5p、REPS2三者间的互补结合关系。qPCR检测过表达ZNF674-AS1对miR-510-5p与REPS2表达的影响,WB法检测过表达ZNF674-AS对细胞增殖和迁移相关因子表达的影响。结果:与癌旁组织相比,ZNF674-AS1在宫颈癌组织中呈明显低表达(P<0.01);与永生化子宫上皮细胞相比,ZNF674-AS1在宫颈癌细胞系中也呈明显低表达(P<0.05或P<0.01),以HCC94细胞中表达最低(P<0.01)。过表达ZNF674-AS1能明显抑制HCC94细胞的增殖(P<0.05)和迁移(P<0.01)。与ZNF674-AS1相互作用的miRNA是miR-510-5p,与miR-510-5p相互作用的基因是REPS2。过表达ZNF674-AS1导致HCC94细胞中miR-510-5p的表达水平降低(P<0.01)而REPS2基因的表达水平升高(P<0.01),同时引起细胞增殖和迁移相关的多种因子(CDK2、cyclin D3、vimentin和twist)上调或下调。结论:lncRNA ZNF674-AS1在宫颈癌组织和细胞中呈低表达,可能通过竞争性结合miR-510-5p而上调REPS2的表达,从而抑制宫颈癌HCC94细胞的增殖和迁移。

10.
Sci Rep ; 10(1): 10626, 2020 06 30.
Article in English | MEDLINE | ID: mdl-32606296

ABSTRACT

Salinity is a major abiotic stress that affects plant growth and development and leads to crop yield loss. Many crop species are more sensitive to salinity stress at the seed germination stage than at other developmental stages. Some studies have shown that sunflower is tolerant to salinity to a certain degree. However, no systematic screening data for sunflower germplasms are available for salinity stress. In this study, 552 sunflower germplasms with different genetic backgrounds were evaluated for salt tolerance. Among them, 30 and 53 sunflower germplasms were identified as highly salt-tolerant and salt-tolerant germplasms, respectively, while 80 and 23 were grouped as salt-sensitive and highly salt-sensitive materials, respectively. Of all the traits tested, the germination index and the germination vigor index were the two most reliable traits, showing the highest correlation with salt tolerance during the seed germination stage of sunflower. Thus, a highly efficient and reliable method for evaluating salinity tolerance of sunflower seed germination was established. These results provided a good foundation for studying salt-tolerance mechanisms and breeding highly salt-tolerant sunflower cultivars.


Subject(s)
Germination , Helianthus/physiology , Salt Tolerance , Genotype , Helianthus/genetics , Plant Breeding/methods , Seeds/genetics , Seeds/physiology
11.
Sci Rep ; 6: 30363, 2016 08 16.
Article in English | MEDLINE | ID: mdl-27527518

ABSTRACT

The plants are always subjected to various environmental stress, because of plant sessile growth. qRT-PCR is a sensitive and reliable technology, and the normalization of target gene expression with suitable reference genes is very important for obtaining accurate data. Halostachys caspica is an extremely salt-tolerant halophyte belonging to Chenopodiaceae and a good candidate to explore the stress-physiological and molecular mechanism. To get truly the expression profiles of coding genes and miRNAs in H. caspica in response to salt and drought stress using qRT-PCR, suitable reference genes need to be confirmed. In this study, 10 candidate genes including ACT, UBC10, UBC13, TUB2, TUB3, EF1α, 5S rRNA, tRNA, U6 and miR1436 from H. caspica are chosen, and among them, the former nine are commonly used as internal control genes, and miR1436 with high sequence copies is no significant difference expression in high salinity-treated and untreated small RNA libraries of this species. The three softwares are used to analyze expression stability. The results showed that EF1α and TUB3 were the most stable under salt and drought stress, respectively, and UBC10 was the most constant aross all the samples with the both stressed combination. This work will benefit deep studies on abiotic tolerance in H. caspica.


Subject(s)
Chenopodiaceae/genetics , Gene Expression Regulation, Plant , Genes, Plant , Computational Biology , Droughts , Gene Expression Profiling , Gene Library , Real-Time Polymerase Chain Reaction , Salinity , Salt-Tolerant Plants/genetics , Stress, Physiological
13.
Sci Rep ; 5: 13639, 2015 Sep 09.
Article in English | MEDLINE | ID: mdl-26350977

ABSTRACT

The mechanism by which plants cope with salt stress remains poorly understood. The goal of this study is to systematically investigate the contribution and distribution of inorganic ions and organic compounds to the osmotic adjustment (OA) in the halophyte species Halostachys caspica. The results indicate that 100-200 mM NaCl is optimal for plant growth; the water content and degree of succulence of the assimilating branches are higher in this treatment range than that in other treatments; parenchyma cells are more numerous with 100 mM NaCl treatment than they are in control. Inorganic ions (mainly Na+ and Cl-) may play a more important role than organic compounds in NaCl-induced OA and are the primary contributors in OA in H. caspica. The inorganic ions and organic solutes display a tissue-dependent distribution. Na+ and Cl- are accumulated in the reproductive organs and within assimilating branches, which may represent a mechanism for protecting plant growth by way of salt ion dilution and organ abscission. Additionally, OA via increased accumulation of organic substances also protected plant growth and development. This finding provides additional evidence for plant tolerance to salinity stress which can be used for breeding new cultivars for stress tolerance.


Subject(s)
Organic Chemicals/metabolism , Osmosis , Salt-Tolerant Plants , Streptophyta/physiology , Stress, Physiological , Ions/metabolism , Phenotype , Salt Tolerance , Sodium Chloride/metabolism , Sodium Chloride/pharmacology , Streptophyta/cytology , Streptophyta/drug effects
14.
Plant Biotechnol J ; 13(3): 395-408, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25832169

ABSTRACT

MicroRNAs (miRNAs), an extensive class of small regulatory RNAs, play versatile roles in plant growth and development as well as stress responses. However, the regulatory mechanism is unclear on miRNA-mediated response to abiotic stress in plants. Halostachys caspica is a halophytic plant species and a great model for investigating plant response to salinity stress. However, no research has been performed on miRNAs in H. caspica. In this study, we employed deep sequencing to identify both conserved and novel miRNAs from salinity-exposed H. caspica and its untreated control. Among the 13-19 million sequences generated from both treatments, a total of 170 conserved miRNAs, belonging to 151 miRNA families, were identified; among these miRNAs, 31 were significantly up-regulated and 48 were significantly down-regulated by salinity stress. We also identified 102 novel miRNAs from H. caspica; among them, 12 miRNAs were significantly up-regulated and 13 were significantly down-regulated by salinity. qRT-PCR expression analysis validated the deep sequencing results and also demonstrated that miRNAs and their targeted genes were responsive to high salt stress and existed a negative expression correlation between miRNAs and their targets. miRNA-target prediction, GO and KEGG analysis showed that miRNAs were involved in salt stress-related biological pathway, including calcium signalling pathway, MAPK signalling pathway, plant hormone signal transduction and flavonoid biosynthesis, etc. This suggests that miRNAs play an important role in plant salt stress tolerance in H. caspica. This result could be used to improve salt tolerance in crops and woods.


Subject(s)
Amaranthaceae/genetics , Gene Expression Regulation, Plant , MicroRNAs/genetics , Amaranthaceae/physiology , Down-Regulation , High-Throughput Nucleotide Sequencing , RNA, Plant/genetics , Salinity , Salt Tolerance , Salt-Tolerant Plants , Sequence Analysis, RNA , Sodium Chloride/metabolism , Stress, Physiological , Up-Regulation
15.
Mol Biol Rep ; 39(8): 7989-96, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22539184

ABSTRACT

According to sequences of H(+)-pyrophosphatase genes from GenBank, a new H(+)-pyrophosphatase gene (KfVP1) from the halophyte Kalidium foliatum, a very salt-tolerant shrub that is highly succulent, was obtained by using reverse transcription PCR and rapid amplification of cDNA ends methods. The obtained KfVP1 cDNA contained a 2295 bp ORF and a 242 bp 3'-untranslated region. It encoded 764 amino acids with a calculated molecular mass of 79.78 kDa. The deduced amino acid sequence showed high identity to those of H(+)-PPase of some Chenopodiaceae plant species. Semi-quantitative PCR results revealed that transcription of KfVP1 in K. foliatum was induced by NaCl, ABA and PEG stress. Transgenic lines of A. thaliana with 35S::KfVP1 were generated. Three transgenic lines grew more vigorous than the wild type (ecotype Col-0) under salt and drought stress. Moreover, the transgenic plants accumulated more Na(+) in the leaves compared to wild type plants. These results demonstrated that KfVP1 from K. foliatum may be a functional tonoplast H(+)-pyrophosphatase in contributing to salt and drought tolerance.


Subject(s)
Adaptation, Biological/genetics , Amaranthaceae/enzymology , Arabidopsis/genetics , Inorganic Pyrophosphatase/genetics , Salt-Tolerant Plants/enzymology , Stress, Physiological/genetics , Amaranthaceae/genetics , Arabidopsis/growth & development , Cloning, Molecular , Droughts , Gene Expression , Gene Expression Regulation, Plant , Gene Order , Molecular Sequence Data , Phenotype , Phylogeny , Plants, Genetically Modified , Salinity , Salt-Tolerant Plants/genetics , Transformation, Genetic
16.
Mol Biol Rep ; 39(6): 7193-202, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22311041

ABSTRACT

The full-length cDNAs of two Karelinia caspica genes, KcNHX1 and KcNHX2, were isolated by RACE and RT-PCR based on the conserved regions of Na(+)/H(+) antiporter (NHX) genes from other halophyte species. The cloned KcNHX1 cDNA contained 2,022 nucleotides with an open reading frame (ORF) of 1,620 bp and the KcNHX2 cDNA contained 1,976 nucleotides with an ORF of 1,653 bp. The deduced amino acid sequences indicated that both genes were homologous to NHXs from other higher plants. To investigate the possible roles of KcNHX1 and KcNHX2 in the salt stress response of K. caspica and the underlying regulatory mechanisms, RNAi vectors were constructed and transformed into K. caspica to specifically silence endogenous KcNHX1 and KcNHX2. The physiological results showed that silencing KcNHX1 in K. caspica led to reduced salt tolerance in high concentrations of NaCl, suggesting that KcNHX1 plays an essential role in the response of K. caspica to salt stress. However, the inhibition of KcNHX2 seemed to have little influence on the salt resistance of transgenic plants, indicating that KcNHX2 may be relevant for functions other than salt tolerance in K. caspica.


Subject(s)
Asteraceae/genetics , Plant Proteins/genetics , Salt-Tolerant Plants/genetics , Sodium-Hydrogen Exchangers/genetics , Vacuoles/metabolism , Asteraceae/growth & development , Asteraceae/metabolism , Chlorophyll/metabolism , Electric Conductivity , Gene Knockdown Techniques , Genetic Engineering , Genetic Enhancement , Malondialdehyde/metabolism , Molecular Sequence Data , Plant Leaves/genetics , Plant Leaves/growth & development , Plant Leaves/metabolism , Plant Proteins/metabolism , Plant Roots/genetics , Plant Roots/growth & development , Plant Roots/metabolism , Plants, Genetically Modified , RNA Interference , Salt Tolerance/genetics , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Sodium-Hydrogen Exchangers/metabolism
17.
Mol Biol Rep ; 38(3): 1889-99, 2011 Mar.
Article in English | MEDLINE | ID: mdl-20886297

ABSTRACT

According to sequences of several vacuolar Na(+)/H(+) antiporter genes from Xinjiang halophytic plants, a new vacuolar Na(+)/H(+) antiporter gene (HcNHX1) from the halophyte Halostachys caspica was obtained by RACE and RT-PCR using primers corresponding to conserved regions of the coding sequences. The obtained HcNHX1 cDNA was 1,983 bp and contained a 1,656 bp open reading frame encoding a deduced protein of 551 amino acid residues. The deduced amino acid sequence showed high identity with other NHX1 we have cloned previously from halophyte in Xinjiang desert area. The phylogenetic analysis showed that HcNHX1 formed a clade with NHX homologs of Chenopodiaceae. Expression profiles under salt treatment and ABA induction were investigated, and the results revealed that expression of HcNHX1 was induced by NaCl and ABA. To compare the degree of salt tolerance, we over-expressed HcNHX1 in Arabidopsis. Two transgenic lines grew more vigorously than the wild type (WT) under salt stress. The analysis of ion contents indicated that under salt stress, the transgenic plants compartmentalized more Na(+) in the leaves compared with wild-type plants. Together, these results suggest that the products of the novel gene HcNHX1 from halophyte Halostachys caspica is a functional tonoplast Na(+)/H(+) antiporter.


Subject(s)
Genes, Plant/genetics , Salt-Tolerant Plants/genetics , Sodium-Hydrogen Exchangers/genetics , Vacuoles/metabolism , Abscisic Acid/pharmacology , Arabidopsis/drug effects , Arabidopsis/genetics , Arabidopsis/growth & development , Biomass , Cloning, Molecular , Computational Biology , DNA, Complementary/genetics , Gene Expression Regulation, Plant/drug effects , Germination/drug effects , Molecular Sequence Data , Phylogeny , Physical Chromosome Mapping , Plant Roots/anatomy & histology , Plant Roots/drug effects , Plants, Genetically Modified , Reproducibility of Results , Salt Tolerance/drug effects , Salt-Tolerant Plants/drug effects , Sodium/metabolism , Sodium Chloride/pharmacology , Sodium-Hydrogen Exchangers/metabolism , Stress, Physiological/drug effects , Stress, Physiological/genetics , Transgenes/genetics , Vacuoles/drug effects
18.
Sheng Wu Gong Cheng Xue Bao ; 19(5): 628-31, 2003 Sep.
Article in Chinese | MEDLINE | ID: mdl-15969097

ABSTRACT

The United Nations Environment Program estimates that approximately 20% of agricultural land and 50% of cropland in the world is salt-stressed. The gene NHX (Na+/H+ exchanger) encodes functional protein that catalyzes the countertransport of Na+ and H+ across membranes and may play an important role in plant salt tolerance. To clone the NHX from the wild plant Populus euphratica collected in Tarim basin and Xinjiang Wujiaqu district into a T-vector, designed primer was used to amplify 1kb NHX cDNA fragment with RT-PCR. Total RNA was extracted from Populus euphratica tissue (plant tissue was collected from Tarim basin and Xinjiang Wujiaqu district and stored in liquid nitrogen) according to the Plant RNA Mini Kits of Omega. First cDNAs were synthesized from 1 microg total RNA of Populus euphratica seedling. A pair of primers were used to perform RT-PCR. The amplified DNA fragment was purified and cloned into pMD18-T vector. However, 1kb and 2.3kb fragment were obtained from Tarim basin and Xinjiang Wujiaqu district and named as PtNHX and PwNHX, respectively. Sequence analysis reveals that the cloned PtNHX fragment of Populus euphratica contains partial NHX coding region with 98%, 86%, 84% and 80% identity comparing with Atriplex gemelini, Suaeda maritima, Arabidopsis thaliana and Oryza sativa, respectively. This analysis suggests that NHX gene would be highly conserved in terms of evolution in plant; and it also suggests that the NHX gene of Populus euphratica also would have the similarity with that of Arabidopsis. It may be of great importance in improvement of the plant salt tolerance and breed of crop. At the same time, sequence analysis shows that PwNHX gene includes a coding region about 1350bp with 99% identity comparing with transposon Tn10 IS10-left transposase of Shigella flexneri. On the one hand, the NHX gene may lose its function because it was inserted a fragment in coding region. On the other hand, its product may play a important role in salt tolerance. Populus grow in saline soil. It speculates that it may have other salt tolerance mechanism in Populus. The transposon can be used as transposon tagging to clone other genes and it will help us to understand farther the salt tolerance mechanism.


Subject(s)
DNA Transposable Elements/genetics , Plant Proteins/genetics , Populus/genetics , Amino Acid Sequence , DNA, Complementary , Genetic Vectors/genetics , Molecular Sequence Data , Plant Proteins/chemistry , Reverse Transcriptase Polymerase Chain Reaction , Sequence Alignment , Sequence Homology, Amino Acid , Shigella flexneri/genetics
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