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1.
Phys Rev E ; 108(5-1): 054608, 2023 Nov.
Article in English | MEDLINE | ID: mdl-38115492

ABSTRACT

Conical surfaces pose an interesting challenge to crystal growth: A crystal growing on a cone can wrap around and meet itself at different radii. We use a disk-packing algorithm to investigate how this closure constraint can geometrically frustrate the growth of single crystals on cones with small opening angles. By varying the crystal seed orientation and cone angle, we find that-except at special commensurate cone angles-crystals typically form a seam that runs along the axial direction of the cone, while near the tip, a disordered particle packing forms. We show that the onset of disorder results from a finite-size effect that depends strongly on the circumference and not on the seed orientation or cone angle. This finite-size effect occurs also on cylinders, and we present evidence that on both cylinders and cones, the defect density increases exponentially as circumference decreases. We introduce a simple model for particle attachment at the seam that explains the dependence on the circumference. Our findings suggest that the growth of single crystals can become frustrated even very far from the tip when the cone has a small opening angle. These results may provide insights into the observed geometry of conical crystals in biological and materials applications.

2.
Phys Rev E ; 106(2-1): 024704, 2022 Aug.
Article in English | MEDLINE | ID: mdl-36109947

ABSTRACT

We investigate the ground-state configurations of two-dimensional liquid crystals with p-fold rotational symmetry (p-atics) on fixed curved surfaces. We focus on the intrinsic geometry and show that isothermal coordinates are particularly convenient as they explicitly encode a geometric contribution to the elastic potential. In the special case of a cone with half-angle ß, the apex develops an effective topological charge of -χ, where 2πχ=2π(1-sinß) is the deficit angle of the cone, and a topological defect of charge σ behaves as if it had an effective topological charge Q_{eff}=(σ-σ^{2}/2) when interacting with the apex. The effective charge of the apex leads to defect absorption and emission at the cone apex as the deficit angle of the cone is varied. For total topological defect charge 1, e.g., imposed by tangential boundary conditions at the edge, we find that for a disk the ground-state configuration consists of p defects each of charge +1/p lying equally spaced on a concentric ring of radius d=(p-1/3p-1)^{1/2p}R, where R is the radius of the disk. In the case of a cone with tangential boundary conditions at the base, we find three types of ground-state configurations as a function of cone angle: (i) for sharp cones, all of the +1/p defects are absorbed by the apex; (ii) at intermediate cone angles, some of the +1/p defects are absorbed by the apex and the rest lie equally spaced along a concentric ring on the flank; and (iii) for nearly flat cones, all of the +1/p defects lie equally spaced along a concentric ring on the flank. Here the defect positions and the absorption transitions depend intricately on p and the deficit angle, which we analytically compute. We check these results with numerical simulations for a set of commensurate cone angles and find excellent agreement.

3.
Phys Rev E ; 105(5-1): 054703, 2022 May.
Article in English | MEDLINE | ID: mdl-35706319

ABSTRACT

Conical surfaces, with a δ function of Gaussian curvature at the apex, are perhaps the simplest example of geometric frustration. We study two-dimensional liquid crystals with p-fold rotational symmetry (p-atics) on the surfaces of cones. For free boundary conditions at the base, we find both the ground state(s) and a discrete ladder of metastable states as a function of both the cone angle and the liquid crystal symmetry p. We find that these states are characterized by a set of fractional defect charges at the apex and that the ground states are in general frustrated due to effects of parallel transport along the azimuthal direction of the cone. We check our predictions for the ground-state energies numerically for a set of commensurate cone angles (corresponding to a set of commensurate Gaussian curvatures concentrated at the cone apex), whose surfaces can be polygonized as a perfect triangular or square mesh, and find excellent agreement with our theoretical predictions.

4.
Front Behav Neurosci ; 16: 835753, 2022.
Article in English | MEDLINE | ID: mdl-35464140

ABSTRACT

In almost all animals, the transfer of information from the brain to the motor circuitry is facilitated by a relatively small number of neurons, leading to a constraint on the amount of information that can be transmitted. Our knowledge of how animals encode information through this pathway, and the consequences of this encoding, however, is limited. In this study, we use a simple feed-forward neural network to investigate the consequences of having such a bottleneck and identify aspects of the network architecture that enable robust information transfer. We are able to explain some recently observed properties of descending neurons-that they exhibit a modular pattern of connectivity and that their excitation leads to consistent alterations in behavior that are often dependent upon the desired behavioral state of the animal. Our model predicts that in the presence of an information bottleneck, such a modular structure is needed to increase the efficiency of the network and to make it more robust to perturbations. However, it does so at the cost of an increase in state-dependent effects. Despite its simplicity, our model is able to provide intuition for the trade-offs faced by the nervous system in the presence of an information processing constraint and makes predictions for future experiments.

5.
Phys Rev E ; 103(2-1): 022139, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33736078

ABSTRACT

Dislocation pileups directly impact the material properties of crystalline solids through the arrangement and collective motion of interacting dislocations. We study the statistical mechanics of these ordered defect structures embedded in two-dimensional crystals, where the dislocations themselves form one-dimensional lattices. In particular, pileups exemplify a new class of inhomogeneous crystals characterized by spatially varying lattice spacings. By analytically formulating key statistical quantities and comparing our theory to numerical experiments using an intriguing mapping of dislocation positions onto the eigenvalues of recently studied random matrix ensembles, we uncover two types of one-dimensional phase transitions in dislocation pileups: A thermal depinning transition out of long-range translational order from the pinned-defect phase, due to a periodic Peierls potential, to a floating-defect state, and finally the melting out of a quasi-long-range ordered floating-defect solid phase to a defect liquid. We also find the set of transition temperatures at which these transitions can be directly observed through the one-dimensional structure factor, where the delta function Bragg peaks, at the pinned-defect to floating-defect transition, broaden into algebraically diverging Bragg peaks, which then sequentially disappear as one approaches the two-dimensional melting transition of the host crystal. We calculate a set of temperature-dependent critical exponents for the structure factor and radial distribution function, and obtain their exact forms for both uniform and inhomogeneous pileups using random matrix theory.

6.
Phys Rev E ; 104(6-2): 065005, 2021 Dec.
Article in English | MEDLINE | ID: mdl-35030870

ABSTRACT

We study the phonon modes of interacting particles on the surface of a truncated cone resting on a plane subject to gravity, inspired by recent colloidal experiments. We derive the ground-state configuration of the particles under gravitational pressure in the small-cone-angle limit and find an inhomogeneous triangular lattice with spatially varying density but robust local order. The inhomogeneity has striking effects on the normal modes such that an important feature of the cone geometry, namely its apex angle, can be extracted from the lattice excitations. The shape of the cone leads to energy crossings at long wavelengths and frequency-dependent quasilocalization at short wavelengths. We analytically derive the localization domain boundaries of the phonons in the limit of small cone angle and check our results with numerical results for eigenfunctions.

7.
Phys Rev Lett ; 125(21): 215503, 2020 Nov 20.
Article in English | MEDLINE | ID: mdl-33275009

ABSTRACT

We explore order in low angle grain boundaries (LAGBs) embedded in a two-dimensional crystal at thermal equilibrium. Symmetric LAGBs subject to a Peierls potential undergo, with increasing temperatures, a thermal depinning transition; above which, the LAGB exhibits transverse fluctuations that grow logarithmically with interdislocation distance. Longitudinal fluctuations lead to a series of melting transitions marked by the sequential disappearance of diverging algebraic Bragg peaks with universal critical exponents. Aspects of our theory are checked by a mapping onto random matrix theory.

8.
Phys Rev E ; 100(5-1): 052315, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31870007

ABSTRACT

Complex networks with directed, local interactions are ubiquitous in nature and often occur with probabilistic connections due to both intrinsic stochasticity and disordered environments. Sparse non-Hermitian random matrices arise naturally in this context and are key to describing statistical properties of the nonequilibrium dynamics that emerges from interactions within the network structure. Here we study one-dimensional (1D) spatial structures and focus on sparse non-Hermitian random matrices in the spirit of tight-binding models in solid state physics. We first investigate two-point eigenvalue correlations in the complex plane for sparse non-Hermitian random matrices using methods developed for the statistical mechanics of inhomogeneous two-dimensional interacting particles. We find that eigenvalue repulsion in the complex plane directly correlates with eigenvector delocalization. In addition, for 1D chains and rings with both disordered nearest-neighbor connections and self-interactions, the self-interaction disorder tends to decorrelate eigenvalues and localize eigenvectors more than simple hopping disorder. However, remarkable resistance to eigenvector localization by disorder is provided by large cycles, such as those embodied in 1D periodic boundary conditions under strong directional bias. The directional bias also spatially separates the left and right eigenvectors, leading to interesting dynamics in excitation and response. These phenomena have important implications for asymmetric random networks and highlight a need for mathematical tools to describe and understand them analytically.

9.
Rev Sci Instrum ; 86(12): 126105, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26724086

ABSTRACT

We present a mechanical laser shutter design that utilizes a direct current electric motor to rotate a blade which blocks and unblocks a light beam. The blade and the main body of the shutter are modeled with computer aided design (CAD) and are produced by 3D printing. Rubber flaps are used to limit the blade's range of motion, reducing vibrations and preventing undesirable blade oscillations. At its nominal operating voltage, the shutter achieves a switching speed of (1.22 ± 0.02) m/s with 1 ms activation delay and 10 µs jitter in its timing performance. The shutter design is simple, easy to replicate, and highly reliable, showing no failure or degradation in performance over more than 10(8) cycles.

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