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1.
J Asian Nat Prod Res ; 26(1): 26-37, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38196236

ABSTRACT

Eight new caffeoyl derivatives, elephantomentosides A-H (1 - 8), together with ten known ones (9 - 18), were isolated from the whole plant of Elephantopos tomentosus L. Their structures were elucidated using detailed spectroscopic analysis. Structurally, compounds 1 - 8 are composed of ß-D-glucopyranose, and almost all of the substituent positions are at the C-1' and C-4' of glucopyranose. The anti-inflammatory and antioxidant activities of all isolated compounds were evaluated in vitro. Compounds 9-10, 13-15, and 17-18 exhibited significant DPPH scavenging capacity with IC50 values in the range of 10.01-25.07 µM, in comparison with Vc (IC50, 17.98 µM).


Subject(s)
Antioxidants , Asteraceae , Molecular Structure , Antioxidants/pharmacology , Antioxidants/chemistry , Asteraceae/chemistry , Anti-Inflammatory Agents/pharmacology , Anti-Inflammatory Agents/chemistry
2.
Phytochemistry ; 206: 113545, 2023 Feb.
Article in English | MEDLINE | ID: mdl-36481315

ABSTRACT

Fifteen undescribed eudesmane-type sesquiterpenes, named atramacronoids D-R, along with fourteen known analogues were isolated from the rhizomes of Atractylodes macrocephala. The structures of atramacronoids D-R were elucidated based on extensive spectroscopic data analysis, Snatzke's rule, electronic circular dichroism (ECD) calculations, and X-ray crystallographic analysis. Notably, of the undescribed isolates, atramacronoids D and E are the first example of eudesmanolactam-phenol and eudesmanolactam-ethyl hybrids obtained from plants, respectively. A pair of enantiomers, (+)- and (-)-atramacronoids F, were successfully resolved by chiral-phase HPLC. Atramacronoid D exhibited weak cytotoxicity against SGC-7901 cells. Atramacronoid E significantly promoted the proliferation of LPS-induced IEC-6 cells.


Subject(s)
Atractylodes , Sesquiterpenes, Eudesmane , Sesquiterpenes , Sesquiterpenes, Eudesmane/pharmacology , Sesquiterpenes, Eudesmane/analysis , Sesquiterpenes, Eudesmane/chemistry , Atractylodes/chemistry , Sesquiterpenes/chemistry , Rhizome/chemistry , Molecular Structure
3.
Huan Jing Ke Xue ; 43(10): 4430-4439, 2022 Oct 08.
Article in Chinese | MEDLINE | ID: mdl-36224129

ABSTRACT

In order to explore the distribution of microplastics in the freshwater environment of Qinghai-Tibet Plateau, 63 surface water samples were collected in Huangshui River basin of Qinghai province during the wet season, and the distribution characteristics and main influencing factors of microplastics in the surface water were analyzed by means of metallographic microscope, Fourier infrared spectroscopy, field investigation, and image data analysis. The potential ecological risks of microplastics were evaluated using risk index (H) and pollution load index (PLI) models. The abundance of microplastics in surface water ranged from 665-8780 n·m-3, with the highest average abundance of 5414 n·m-3 in Huangyuan County. The abundance of microplastics increased from upstream to downstream. The main colors of microplastics were transparent (67%) and black (17%), and the particle size was less than 50 µm (70%). Polyethylene (66%) and polypropylene (12%) were the main polymer types. The abundance of microplastics was positively correlated with cultivated land area, precipitation, and ultraviolet intensity, but the opposite results were observed in dissolved oxygen, redox potential, and wind speed. Additionally, the potential ecological risk of surface water in the Huangshui River basin was relatively low.


Subject(s)
Microplastics , Water Pollutants, Chemical , Environmental Monitoring/methods , Oxygen/analysis , Plastics/analysis , Polyethylene/analysis , Polypropylenes/analysis , Water/analysis , Water Pollutants, Chemical/analysis
4.
Phytochemistry ; 203: 113346, 2022 Nov.
Article in English | MEDLINE | ID: mdl-35961408

ABSTRACT

1H-NMR guided fractionation led to the isolation of twenty-two coumarin monoterpenes from the whole plant of Gerbera piloselloides, among which fourteen were undescribed. All coumarin monoterpenes were initially found to be racemates without optical activity. Subsequently, eleven pairs of optically pure enantiomers were successfully separated by chiral phase HPLC. Their structures and absolute configurations were unambiguously determined based on their spectroscopic data, calculated/experimental electronic circular dichroism (ECD) data, and X-ray diffraction analysis. Bioassays in LPS-treated RAW 264.7 cells revealed that the four compounds possessed moderate anti-inflammatory activity. In addition, the correlations between the cotton effect (CE) from δ-lactone at approximately 210-220 nm in CD spectra and γ-C or the ring fused at γ-C of the skeleton were reported for the first time.


Subject(s)
Asteraceae , Monoterpenes , Anti-Inflammatory Agents/pharmacology , Asteraceae/chemistry , Coumarins/chemistry , Coumarins/pharmacology , Lactones , Lipopolysaccharides/pharmacology , Molecular Structure , Monoterpenes/pharmacology , Proton Magnetic Resonance Spectroscopy
5.
J Ethnopharmacol ; 288: 114968, 2022 Apr 24.
Article in English | MEDLINE | ID: mdl-35007681

ABSTRACT

ETHNOPHARMACOLOGICAL RELEVANCE: The dispensing granules of traditional Chinese medicines (TCMs) is an innovative form of medicinal material for TCMs decoction, which is gradually recognized in the clinic due to being suitable for production on a large scale and convenient to take for patients. However, the quality control of TCMs dispensing granules is being challenged, because they contain too many unrevealed hydrophilic components. AIM OF THE STUDY: Here, the dispensing granules produced from the rhizome of Atractylodes macrocephala (Baizhu dispensing granules), were explored as a case to explore the quality markers correlated to the clinical efficacy of TCMs dispensing granules by a comprehensive strategy of integrating chemical profiling, network pharmacology, and chemometric analysis. MATERIALS AND METHODS: First, the chemical profiling of Baizhu dispensing granules was characterized by using ultra-performance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF/MS). Subsequently, the potential active components responsible for the efficacy of Baizhu dispensing granules were screened via network pharmacology, and the ultra-performance liquid chromatography coupled with photodiode array detector (UPLC-PDA) method was developed for quantitative analysis of the potential active components in 26 batches of Baizhu dispensing granules. Finally, the quality markers of Baizhu dispensing granules were deciphered based on content variations of potential active components and chemometric analysis. RESULTS: A total of 69 components were identified from Baizhu dispensing granules. Network pharmacology analysis further revealed that eight of them including five caffeoylquinic acids (31, 32, 36, 42, 44) and three sesquiterpenoids (63, 67, 76) were intimately connected to the core targets of dyspepsia, enteritis, gastritis and immunity. The contents of eight components differed greatly among 26 batches of Baizhu dispensing granules. Chlorogenic acid (31), cryptochlorogenic acid (32) and atractylenolide III (63) have higher concentrations and make great contributions to distinguish different batches of the Baizhu dispensing granules based on principal component analysis (PCA) and orthogonal partial least squares-discriminate analysis (OPLS-DA), and could be used as the quality markers of Baizhu dispensing granules. CONCLUSIONS: Our study defined the quality markers of Baizhu dispensing granules, which will benefit further investigation on the quality evaluation of TCMs dispensing granules containing Baizhu. The strategy used in this study will be helpful for discovering the quality markers of other TCMs dispensing granules.


Subject(s)
Atractylodes/chemistry , Drugs, Chinese Herbal/pharmacology , Medicine, Chinese Traditional/standards , Quality Control , Chemometrics , Chromatography, High Pressure Liquid , Drugs, Chinese Herbal/chemistry , Drugs, Chinese Herbal/standards , Humans , Mass Spectrometry , Network Pharmacology , Principal Component Analysis , Rhizome
6.
Nat Prod Res ; 36(3): 805-813, 2022 Feb.
Article in English | MEDLINE | ID: mdl-32787575

ABSTRACT

Seven new phenylpropanoids, including two pairs of enantiomers of 8-O-4'-type neolignans, named (±)-xanthiifructins A-B (1a/1b-2a/2b), a pair of simple phenylpropanoid derivatives (±)-xanthiifructins C (3a/3b), and a racemic phenylpropanoid derivative xanthiifructin D (4), together with four known analogues (5-8) were isolated from the fruits of Xanthium sibiricum. Racemic xanthiifructins A-C were separated on chiral HPLC columns. Their structures were elucidated by comprehensive spectroscopic data analysis and comparison with the literatures. The anti-inflammatory and cytotoxic activities were evaluated for all isolates. Among them, (-)-xanthiifructin C (3b) exhibited potent inhibitory effect against nitric oxide production in lipopolysaccharide-activated RAW 264.7 mouse macrophage cells with an IC50 value of 9.94 ± 0.57 µM. All compounds obviously were inactive for three human tumor cell lines (MCF-7, HepG2, and A549) with IC50 values much more than 10 µM.


Subject(s)
Xanthium , Animals , Anti-Inflammatory Agents/pharmacology , Fruit , Mice , Molecular Structure , RAW 264.7 Cells
7.
J Cosmet Dermatol ; 21(5): 2205-2214, 2022 May.
Article in English | MEDLINE | ID: mdl-34665916

ABSTRACT

OBJECTIVE: The objective of this work was to develop a peptide production process of the exact molecular weight propitious to topical application for cosmetics and to investigate the effects of enzymolysis-derived peptide on UVB-induced photoaging rat skin. METHODS: The chum salmon fish skins were hydrolyzed by alkaline protease and neutral protease and spray-dried at different conditions, and three kinds of molecular weight peptide (MFSOP) were obtained. A total of 66 ICR rats (female, 20 ± 1 g) were randomly divided into eleven groups, including the normal, model, and experimental groups. The three kinds of MFSOP were dissolved at different dosages (5‰, 2.5%, and 5%) and then applied on the ICR hairless back skins prior to exposing UVB irradiation of 3000mJ/cm2 to them 4 h later. After 8 weeks, the rats were killed and the hair-shaved skins were tested for skin moisture, hyaluronic acid, hydroxyproline, antioxidant activity, and RNA expression. RESULTS: Three kinds of MFSOP were obtained, with the average molecular weights of 495.16, 1194.00, and 2032.46 Dalton, respectively. The MFSOPs, especially the MFSOP of average molecular weight of 1194.00 Dalton, played an important role in the recovery of the UVB-injured skin tissue in lock in moisture, in antioxidant activity and in promotion in collagen and elastin protein to some extent. CONCLUSION: MFSOPs, especially MFSOP of average molecular weight of 1194.00 Dalton, derived from enzymolysis are potential materials to apply in cosmetics for the UVB9-induced anti-photoaging activity (lock in moisture, antioxidant activity, and promotion in collagen and elastin protein).


Subject(s)
Skin Aging , Animals , Antioxidants/pharmacology , Collagen , Elastin , Female , Humans , Mice , Mice, Hairless , Molecular Weight , Oligopeptides , Peptides/pharmacology , Rats , Skin , Ultraviolet Rays/adverse effects
8.
J Asian Nat Prod Res ; 23(12): 1140-1147, 2021 Dec.
Article in English | MEDLINE | ID: mdl-33502251

ABSTRACT

A pair of new enantiomeric trinorsesquiterpenes, (+)-genpenterpene A (1a) and (-)-genpenterpene A (1b), together with seven known compounds (2-8), were isolated from the aerial parts of Justicia gendarussa Burm.f.. All of these known compounds were isolated from this plant for the first time. Racemic genpenterpene A was separated by chiral HPLC column. Their chemical structures were elucidated based on extensive spectroscopic analysis, single crystal X-ray diffraction, and ECD calculations. (+)-genpenterpene A (1a) exhibited potent inhibitory effect against nitric oxide production in lipopolysaccharide-activated RAW 264.7 mouse macrophage cells with an IC50 value of 9.54 ± 1.02 µM.


Subject(s)
Justicia , Animals , Lipopolysaccharides/pharmacology , Mice , Molecular Structure , Plant Components, Aerial , RAW 264.7 Cells
9.
Nat Prod Res ; 35(3): 447-454, 2021 Feb.
Article in English | MEDLINE | ID: mdl-31282219

ABSTRACT

Lyciyunin, a new dimer of feruloyltyramine (1), together with five known tyramines (2-6), was isolated from the water-soluble fraction of an EtOH extract of the root of L. yunnanense. Based on HR-TOF-MS, NMR spectral data and quantum chemistry ECD calculations, the structure of this new compound was determined, including its absolute configuration. Compounds (1-6) were tested for their antioxidant activity using in vitro DPPH radical scavenging assay, and 1-6 showed the moderate antioxidant activities with IC50 values of 12.44 ± 0.39, 21.29 ± 0.75, 24.44 ± 1.63, 21.15 ± 0.66, 21.15 ± 0.66 and 45.15 ± 0.56 µM, respectively. Compounds (5-6) showed anti-inflammatory activity in LPS-induced RAW 264.7 macrophages with the IC50 values of 43.95 ± 6.11 and 33.50 ± 2.04 µM, respectively.


Subject(s)
Anti-Inflammatory Agents, Non-Steroidal/pharmacology , Antioxidants/pharmacology , Coumaric Acids/chemistry , Lycium/chemistry , Tyramine/analogs & derivatives , Tyramine/chemistry , Animals , Anti-Inflammatory Agents, Non-Steroidal/chemistry , Antioxidants/chemistry , Dimerization , Drug Evaluation, Preclinical , Ethanol/chemistry , Lipopolysaccharides/pharmacology , Magnetic Resonance Spectroscopy , Mass Spectrometry , Mice , Molecular Structure , Plant Extracts/chemistry , RAW 264.7 Cells , Tyramine/pharmacology
10.
J Asian Nat Prod Res ; 23(1): 82-88, 2021 Jan.
Article in English | MEDLINE | ID: mdl-31888376

ABSTRACT

Barbaram (1), a neolactam together with other five known compunds (2-6) was isolated from the EtOAc-soluble fraction of an EtOH extract of the root and stem of Lycium barbarum by using silica gel, Sephadex LH-20 column chromatography and semi-preparative RP-C18 HPLC. Based on HR-TOF-MS, NMR spectral data, quantum chemistry ECD calculations and referencing to the data reported earlier, the structures of these compounds (1-6) were determined, specially including the absolute configuration of the neolactam (1). Compounds 2 and 4 showed significant anti-inflammatory activity in LPS-induced RAW 264.7 macrophages with the IC50 values of 8.98 ± 0.57 µM, 6.68 ± 0.77 µM.


Subject(s)
Lycium , Anti-Inflammatory Agents , Chromatography, High Pressure Liquid , Magnetic Resonance Spectroscopy , Molecular Structure
11.
Nat Prod Res ; 35(21): 3625-3633, 2021 Nov.
Article in English | MEDLINE | ID: mdl-32000527

ABSTRACT

Four new rearranged eudesmane sesquiterpenoids, Lyciiterpenoids A-D (1-4), together with four known compounds (5-8) were isolated from the aqueous extract of Lycii Cortex. Their structures were elucidated by spectroscopic analysis, and the absolute configurations of compounds 1-4 were determined by the quantum chemical ECD calculations. The absolute configuration of 1 was further confirmed by X-ray crystallographic data analysis. All the isolated compounds were evaluated for their cytotoxicity against three human cancer cell lines (MCF-7, HepG2, and A549). However, no significant activities were detected even with a concentration up to 100 µM.


Subject(s)
Neoplasms , Sesquiterpenes, Eudesmane , Sesquiterpenes , Crystallography, X-Ray , Humans , Molecular Structure , Sesquiterpenes/pharmacology , Sesquiterpenes, Eudesmane/pharmacology
12.
Nat Prod Res ; 35(20): 3478-3486, 2021 Oct.
Article in English | MEDLINE | ID: mdl-31928366

ABSTRACT

Three new compounds (1-3), together with six known compounds (4-9), were isolated from the ethyl acetate fraction of ethanol extract of the aerial parts of Justicia gendarussa Burm.f. All of these known compounds were isolated from the plant for the first time. Their structures including absolute configurations were elucidated on the basis of HR-ESI-MS, NMR spectroscopic analyses, single crystal X-ray diffraction and comparison with the literatures. Compounds 1-9 were tested for their antioxidant and anti-inflammatory activities. Compounds 5 and 8 showed the antioxidant activities with IC50 values of 28.61 ± 1.56 and 22.55 ± 1.38 µM, respectively. Compounds 2 and 3 showed anti-inflammatory activity in LPS-induced RAW 264.7 macrophages with the IC50 values of 20.95 ± 1.11 and 16.50 ± 1.04 µM, respectively.


Subject(s)
Anti-Inflammatory Agents/pharmacology , Antioxidants/pharmacology , Justicia , Plant Components, Aerial/chemistry , Anti-Inflammatory Agents/chemistry , Antioxidants/chemistry
13.
Zhongguo Zhong Yao Za Zhi ; 45(12): 2907-2915, 2020 Jun.
Article in Chinese | MEDLINE | ID: mdl-32627466

ABSTRACT

This study was carried out to investigate the chemical constituents from Xanthii Fructus(the fruits of Xanthium sibiricum). The compounds were separated and purified by silica gel column chromatography, Sephadex LH-20 and ODS chromatography and semi-preparative HPLC. Base on HR-ESI-MS, NMR and other spectral data, their structures were identified. The anti-inflammatory activity of the isolated compounds was evaluated by lipopolysaccharide(LPS)-induced macrophage RAW264.7 as a screening model. A total of twenty-one compounds were isolated from the EtOAc fraction of 95% ethanol extract and identified as uracil(1), thymine(2), uridine(3), indole-3-carbaldehyde(4), indole-3-carboxylic acid(5), 2'-O-methyluridine(6), guanosine(7), 2,4(1H,3H)-quinazolinedione(8), 3-hydroxy-3-(2-hydroxyethyl)indolin-2-one(9), nicotinamide(10), N-acetyl-L-phenylalaninol(11), heliolactam(12), terresoxazine(13), caudatin(14), qingyangshengenin(15), caudatin-3-O-ß-D-oleandropyranosyl-(1→4)-ß-D-cymaropyranosyl-(1→4)-ß-D-cymaropyranoside(16), caudatin-3-O-ß-D-cymaropyranosyl-(1→4)-ß-D-oleandropyranosyl-(1→4)-ß-D-cymaropyranosyl-(1→4)-ß-D-cymaropyranoside(17), caudatin-3-O-α-L-cymaropyranosyl-(1→4)-ß-D-cymaropyranosyl-(1→4)-ß-D-cymaropyranosyl-(1→4)-α-L-cymaropyranosyl-(1→4)-ß-D-oleandropyranosyl-(1→4)-ß-D-cymaropyranoside(18), qinyangshengenin-3-O-ß-D-oleandropyranosyl-(1→4)-ß-D-oleandropyranosyl-(1→4)-ß-D-cymaropyranoside(19), qinyangshengenin-3-O-ß-D-oleandropyranosyl-(1→4)-ß-D-cymaropyranosyl-(1→4)-ß-D-digitoxopyranoside(20), rostratamine-3-O-ß-D-oleandropyranosyl-(1→4)-ß-D-cymaropyranosyl-(1→4)-ß-D-cymaropyranoside(21). Compounds 5-21 are obtained from genus Xanthium for the first time. Compounds 12 and 13 indirectly exhibited anti-inflammatory activity by suppressing LPS-induced NO production in RAW264.7 cells with IC_(50) values of(15.45±0.56) and(20.14±0.78) µmol·L~(-1), respectively.


Subject(s)
Fruit , Xanthium , Chromatography, High Pressure Liquid , Glycosides , Magnetic Resonance Spectroscopy , Molecular Structure
14.
Phytochemistry ; 173: 112293, 2020 May.
Article in English | MEDLINE | ID: mdl-32062197

ABSTRACT

Seven previously undescribed sulfur-containing compounds, (+)- and (-)-xanthiazinone A, (+)- and (-)-xanthiazinone B, (+)- and (-)-xanthiazinone C and xanthiazinone D, and four known thiazinedione derivatives, together with three thiophene derivatives were isolated from the fruits of Xanthium sibiricum. Racemic xanthiazinones A-C were separated by chiral HPLC columns. Their chemical structures were elucidated based on extensive spectroscopic analyses, ECD calculations, and single crystal X-ray diffractions. The X-ray crystallographic analyses for xanthiazinones A-C represent the first example described for the structure elucidation of the thiazinedione with the five-membered lactone ring attached via an oxygen atom. Accordingly, the previously proposed structure for xanthiazinone was revised. The anti-inflammatory and cytotoxic activities were evaluated for all the isolated compounds. (+)-xanthiazinone B and 2-hydroxy-xanthiazone exhibited potent inhibitory effects against nitric oxide production in lipopolysaccharide-activated RAW 264.7 mouse macrophage cells with IC50 values of 8.75 and 10.90 µM, respectively. All compounds obviously were inactive for three human tumor cell lines (HepG2, MCF-7, and A549) with IC50 values more than 10 µM.


Subject(s)
Xanthium , Animals , Anti-Inflammatory Agents , Fruit , Humans , Mice , Sulfur , Sulfur Compounds
15.
Ying Yong Sheng Tai Xue Bao ; 29(8): 2695-2704, 2018 Aug.
Article in Chinese | MEDLINE | ID: mdl-30182610

ABSTRACT

Decades of ecological restoration on the Loess Plateau has achieved significant on-site benefits to reduce soil erosion and improve soil quality, with remarkable off-site effects of reducing sediment delivery to Yellow River. However, regional forest community succession is still far from being adequately developed. The Ziwuling forest region and its highly developed forest community, as an advanced eco-zone, can lend practical experience to other regions on the Loess Plateau and help to identify the most suitable tree species for a better regional restoration in the future. With the aim to systematically understand the potential effects of typical local tree species to soil properties, three typical and well-established artificial forests in the Ziwuling region, Robinia pseudoacacia, Pinus tabuliformis and Platycladus orientalis were investigated in this study, with the climax community Quercus wutaishanica as a reference. All the four forest type had comparable stand age (25 years). Soil samples from 0-20 cm layers were collected from those four plantations. The soil microbial biomass (carbon and nitrogen), soil enzyme (invertase, urease and alkaline phosphatase) activities and their correlations were measured and analyzed. The results showed that: 1) soil invertase activity ranged from 16.94 to 64.49 mg·g-1·24 h-1, the soil urease activity from 0.15 to 0.26 mg·g-1·24 h-1, and the alkaline phosphatase activity from 0.65 to 1.23 mg·g-1·24 h-1. The activities of those three enzymes were significantly higher in the P. orientalis soil that in the R. pseudoacacia and P. tabuliformis soils. The geometric average values in the P. orientalis soil were even greater than that in the Q. wutaishanica soil. 2) The soil microbial biomass carbon and nitrogen varied from 247.37 to 529.84 mg·kg-1 and 41.48 to 77.91 mg·kg-1, respectively. Both of them were significantly greater in the P. orientalis soil than that in the R. pseudoacacia and P. tabu-liformis soils. Even though the soil microbial biomass carbon in the P. orientalis soil remained lower than that in the Q. wutaishanica soil, its soil microbial biomass nitrogen was greater than in the Q. wutaishanica soil. 3) The dissolved organic carbon and nitrogen in the P. tabuliformis soil were much greater than that in other species, even greater than their own soil microbial biomass carbon and nitrogen. Such a result indicated that dissolved organic matter might play a more important role in providing plant available nutrients than microbial biomass in the P. tabuliformis soil. 4) The microbial biomass carbon and nitrogen were significantly positively correlated with the total organic carbon and the total nitrogen, particularly for the R. pseudoacacia and P. tabuliformis soils. There were significantly positive relationships between the soil invertase activity, urease activity and alkaline phosphatase activity, and their soil organic carbon, total nitrogen and total phosphorus contents. 5) Based on the results of principal component analysis, we concluded that the artificial forests types had obvious effects on soil microbial carbon and nitrogen, soil organic carbon, total nitrogen, the ratio of carbon to phosphorus, the ratio of nitrogen to phosphorus and urease activity. Overall, our findings suggested that P. orientalis is better than R. pseudoacacia and P. tabuliformis in term of improving soil properties in the south forest zone on the Chinese Loess Plateau.


Subject(s)
Forests , Soil Microbiology , Biomass , Carbon , China , Nitrogen , Phosphorus , Pinus , Robinia , Soil , Urease
16.
J Cell Sci ; 129(1): 39-50, 2016 Jan 01.
Article in English | MEDLINE | ID: mdl-26567220

ABSTRACT

MicroRNAs (miRNAs) play important roles in the development of skeletal muscle. In our previous study, expression of miR-195 and miR-497 were shown to be upregulated during muscle development in pigs. In this study, we investigated the roles of these two miRNAs in myogenesis and analyzed their transcriptional regulation. Our results showed that miR-195 and miR-497 were upregulated during muscle development and myoblast differentiation. Moreover, miR-195 and miR-497 inhibited proliferation but not differentiation in C2C12 cells. Further investigation revealed that Igf1r, Insr, Ccnd2 and Ccne1 were directly targeted by miR-195 and miR-497 in myoblasts. In addition, we confirmed that miR-195 and miR-497, which shared the similar expression profiling, were negatively regulated by nuclear factor κB (NF-κB) in both myoblasts and skeletal muscle tissue. Our data illustrate that the signaling pathway NF-κB-miR-195/497-Igf1r/Insr-Ccnd2/Ccne1 plays important roles in myogenesis. Our study provides novel evidence for the roles of miR-195 and miR-497 in muscle development.


Subject(s)
Cyclin D2/genetics , Cyclin E/genetics , MicroRNAs/metabolism , Myoblasts/cytology , NF-kappa B/metabolism , Receptor, IGF Type 1/genetics , Receptor, Insulin/genetics , Animals , Base Sequence , Binding Sites , Cell Differentiation , Cell Line , Cell Proliferation , Cyclin D2/metabolism , Cyclin E/metabolism , Mice, Inbred BALB C , MicroRNAs/genetics , Molecular Sequence Data , Muscle Development , Myoblasts/metabolism , Promoter Regions, Genetic/genetics , Protein Binding , Receptor, IGF Type 1/metabolism , Receptor, Insulin/metabolism , Up-Regulation
17.
Ying Yong Sheng Tai Xue Bao ; 27(12): 3823-3830, 2016 Dec.
Article in Chinese | MEDLINE | ID: mdl-29704339

ABSTRACT

In order to research into the influence of Grain to Green Project in Ziwuling forest region, this paper took three typical plantations which were Robinia pseudoacacia plantation, Pinus tabuliformis plantation, and Platycladus orientalis plantation in the Ziwuling forest region of Shaanxi Province as research objects and analyzed the carbon, nitrogen and phosphorus contents of leaf, litter and soil among the three plantations. The results showed that the contents of C, N and P in the three plantations were in order of leaf > litter > soil, the contents of N and P in leaf of R. pseu-doacacia plantation were significantly higher than that of P. tabuliformis plantation and P. orientalis. Leaf N:P was 12.21, 5.36 and 6.09 in R. pseudoacacia plantation, P. tabuliformis plantation and P. orientalis plantation, respectively. It was indicated that the three species were all subject to N deficiency. C:N and C:P showed the trend of litter > leaf > soil, and N:P demonstrated the trend of leaf > litter > soil. There were highly significant positive relationships in C:N between leaf and litter in P. tabuliformis plantation. N and P in the leaf development process of R. pseu-doacacia plantation were proportionally absorbed, and proportionally remained in the litter after N and P resorption. R. pseudoacacia was the better plantation species than P. tabuliformis and P. orientalis in the south fo-rest zone on the Loess Plateau.


Subject(s)
Forests , Plant Leaves/chemistry , Soil/chemistry , Carbon/analysis , China , Cupressaceae , Nitrogen/analysis , Phosphorus/analysis , Pinus , Robinia
18.
Genom Data ; 4: 146-7, 2015 Jun.
Article in English | MEDLINE | ID: mdl-26484202

ABSTRACT

Although Pseudomonas syringae uses the two-component system RhpRS to modulate the expression of type III secretion system (T3SS) genes and pathogenicity, the molecular mechanisms and the regulon of RhpRS have yet to be fully demonstrated. We have performed a genome-wide analysis of RhpR binding to DNA prepared from P. syringae pv. phaseolicola in order to identify candidate direct targets of RhpR-mediated transcriptional regulation, as described in our recent article [1]. The data are available from NCBI Gene Expression Omnibus (GEO) with the accession number GSE58533. Here we describe the detailed methods and data analyses of our RhpR ChIP-seq dataset.

19.
Sci Rep ; 3: 3049, 2013 Oct 25.
Article in English | MEDLINE | ID: mdl-24157896

ABSTRACT

Box-covering algorithm is a widely used method to measure the fractal dimension of complex networks. Existing researches mainly deal with the fractal dimension of unweighted networks. Here, the classical box covering algorithm is modified to deal with the fractal dimension of weighted networks. Box size length is obtained by accumulating the distance between two nodes connected directly and graph-coloring algorithm is based on the node strength. The proposed method is applied to calculate the fractal dimensions of the "Sierpinski" weighted fractal networks, the E.coli network, the Scientific collaboration network, the C.elegans network and the USAir97 network. Our results show that the proposed method is efficient when dealing with the fractal dimension problem of complex networks. We find that the fractal property is influenced by the edge-weight in weighted networks. The possible variation of fractal dimension due to changes in edge-weights of weighted networks is also discussed.


Subject(s)
Algorithms , Models, Theoretical
20.
J Neurosci Res ; 90(10): 2034-42, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22674379

ABSTRACT

Ubiquitin-positive cytoplasmic inclusions are consistently found in various neurodegenerative diseases. As with ubiquitin, anti-p62/SQSTM1 (referred to as p62) antibody clearly immunostains these inclusions. p62 has a ubiquitin-associated domain at the carboxyl terminus and thereby interacts with ubiquitinated and misfolded proteins. Here we immunoprecipitated endogenous p62 in the cerebral cortex from patients with frontotemporal lobar degeneration with TDP-43 inclusions (FTLD-TDP) and found that p62 coimmunoprecipitated several proteins, including TDP-43, which is a major disease protein in FTLD-TDP. Unexpectedly, p62 immunoprecipitated a smaller amount of TDP-43 in FTLD-TDP compared with controls. Further analyses showed that p62 physiologically binds to TDP-43 and likely is involved in degradation of TDP-43 with 35-kDa, but not full-length TDP-43. Our results suggest that the interaction of TDP-43 and p62 is disrupted and may participate in the pathogenesis of TDP-43 proteinopathy.


Subject(s)
Adaptor Proteins, Signal Transducing/genetics , DNA-Binding Proteins/metabolism , Frontotemporal Dementia/metabolism , Frontotemporal Dementia/pathology , Inclusion Bodies/pathology , Blotting, Western , Cell Line , DNA, Complementary/biosynthesis , DNA, Complementary/genetics , Fluorescent Antibody Technique , HeLa Cells , Humans , Immunoprecipitation , Indicators and Reagents , Plasmids/genetics , Protein Binding , RNA, Small Interfering/biosynthesis , RNA, Small Interfering/genetics , Sequestosome-1 Protein , Transfection
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