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1.
Huan Jing Ke Xue ; 44(8): 4554-4564, 2023 Aug 08.
Article in Chinese | MEDLINE | ID: mdl-37694649

ABSTRACT

Biochar has high carbon stability and is a good carbon sequestration material. Sludge biochar is rich in inorganic minerals, which would provide enrichment in the preparation process of pyrolysis, affecting its carbon sequestration capacity in practice. In this study, municipal sludge biochar (SZB), pharmaceutical sludge biochar (YCB), and chicken manure biochar (JFB) were prepared under the pyrolysis process at 500, 600, and 700℃, respectively, and their aging process in soil for 70-100 years was simulated. The physicochemical properties and the carbon loss calculation of the biochars were determined using elemental analysis, FTIR, XRF, ICP, and XRD. The results demonstrated that the type and mass fraction of endogenous minerals in the biochars determined their carbon loss during pyrolysis. Ca and Mg were the main carbon-protecting minerals, whereas Fe may have reduced the carbon stability of the sludge biochars and therefore increased the carbon loss. For the aging process, the stability of the endogenous carbon in the biochars played a major role in its carbon loss, whereas the endogenous minerals played a supporting role. These findings elucidated the effect of the stability of endogenous carbon and the composition of mineral components on the carbon loss of biochars, which may provide references for soil carbon sequestration using sludge and chicken manure biochar.


Subject(s)
Carbon , Livestock , Animals , Manure , Sewage , Chickens , Soil
2.
J Clin Invest ; 132(5)2022 03 01.
Article in English | MEDLINE | ID: mdl-35229730

ABSTRACT

Down syndrome (DS), or trisomy 21, is one of the critical risk factors for early-onset Alzheimer's disease (AD), implicating key roles for chromosome 21-encoded genes in the pathogenesis of AD. We previously identified a role for the deubiquitinase USP25, encoded on chromosome 21, in regulating microglial homeostasis in the AD brain; however, whether USP25 affects amyloid pathology remains unknown. Here, by crossing 5×FAD AD and Dp16 DS mice, we observed that trisomy 21 exacerbated amyloid pathology in the 5×FAD brain. Moreover, bacterial artificial chromosome (BAC) transgene-mediated USP25 overexpression increased amyloid deposition in the 5×FAD mouse brain, whereas genetic deletion of Usp25 reduced amyloid deposition. Furthermore, our results demonstrate that USP25 promoted ß cleavage of APP and Aß generation by reducing the ubiquitination and lysosomal degradation of both APP and BACE1. Importantly, pharmacological inhibition of USP25 ameliorated amyloid pathology in the 5×FAD mouse brain. In summary, we identified the DS-related gene USP25 as a critical regulator of AD pathology, and our data suggest that USP25 serves as a potential pharmacological target for AD drug development.


Subject(s)
Alzheimer Disease , Amyloidosis , Down Syndrome , Alzheimer Disease/pathology , Amyloid Precursor Protein Secretases/genetics , Amyloid Precursor Protein Secretases/metabolism , Amyloid beta-Peptides/genetics , Amyloid beta-Peptides/metabolism , Amyloid beta-Protein Precursor/genetics , Amyloid beta-Protein Precursor/metabolism , Amyloidosis/metabolism , Amyloidosis/pathology , Animals , Aspartic Acid Endopeptidases/genetics , Aspartic Acid Endopeptidases/metabolism , Brain/metabolism , Disease Models, Animal , Down Syndrome/metabolism , Flavin-Adenine Dinucleotide/metabolism , Mice , Mice, Transgenic , Ubiquitin Thiolesterase/genetics , Ubiquitin Thiolesterase/metabolism
3.
Mol Psychiatry ; 2022 Mar 25.
Article in English | MEDLINE | ID: mdl-35338313

ABSTRACT

Astrocyte aerobic glycolysis provides vital trophic support for central nervous system neurons. However, whether and how astrocytic metabolic dysregulation contributes to neuronal dysfunction in intellectual disability (ID) remain unclear. Here, we demonstrate a causal role for an ID-associated SNX27 mutation (R198W) in cognitive deficits involving reshaping astrocytic metabolism. We generated SNX27R196W (equivalent to human R198W) knock-in mice and found that they displayed deficits in synaptic function and learning behaviors. SNX27R196W resulted in attenuated astrocytic glucose uptake via GLUT1, leading to reduced lactate production and a switch from homeostatic to reactive astrocytes. Importantly, lactate supplementation or a ketogenic diet restored neuronal oxidative phosphorylation and reversed cognitive deficits in SNX27R196W mice. In summary, we illustrate a key role for astrocytic SNX27 in maintaining glucose supply and glycolysis and reveal that altered astrocytic metabolism disrupts the astrocyte-neuron interaction, which contributes to ID. Our work also suggests a feasible strategy for treating ID by restoring astrocytic metabolic function.

4.
Front Genet ; 12: 735786, 2021.
Article in English | MEDLINE | ID: mdl-34956310

ABSTRACT

Mongolians dwell at the Eastern Eurasian Steppe, where is the agriculture and pasture interlaced area, practice pastoral subsistence strategies for generations, and have their own complex genetic formation history. There is evidence that the eastward expansion of Western Steppe herders transformed the lifestyle of post-Bronze Age Mongolia Plateau populations and brought gene flow into the gene pool of Eastern Eurasians. Here, we reported genome-wide data for 42 individuals from the Inner Mongolia Autonomous Region of North China. We observed that our studied Mongolians were structured into three distinct genetic clusters possessing different genetic affinity with previous studied Inner Mongolians and Mongols and various Eastern and Western Eurasian ancestries: two subgroups harbored dominant Eastern Eurasian ancestry from Neolithic millet farmers of Yellow River Basin; another subgroup derived Eastern Eurasian ancestry primarily from Neolithic hunter-gatherers of North Asia. Besides, three-way/four-way qpAdm admixture models revealed that both north and southern Western Eurasian ancestry related to the Western Steppe herders and Iranian farmers contributed to the genetic materials into modern Mongolians. ALDER-based admixture coefficient and haplotype-based GLOBETROTTER demonstrated that the former western ancestry detected in modern Mongolian could be recently traced back to a historic period in accordance with the historical record about the westward expansion of the Mongol empire. Furthermore, the natural selection analysis of Mongolians showed that the Major Histocompatibility Complex (MHC) region underwent significantly positive selective sweeps. The functional genes, alcohol dehydrogenase (ADH) and lactase persistence (LCT), were not identified, while the higher/lower frequencies of derived mutations were strongly correlated with the genetic affinity to East Asian/Western Eurasian populations. Our attested complex population movement and admixture in the agriculture and pasture interlaced area played an important role in the formation of modern Mongolians.

5.
Food Funct ; 12(17): 7954-7963, 2021 Sep 07.
Article in English | MEDLINE | ID: mdl-34251375

ABSTRACT

In this study, the immunomodulatory effect of sea buckthorn (SBT) pulp oil was elucidated in immunosuppressed Balb/c mice induced by cyclophosphamide (CTX). The results showed that SBT pulp oil could reverse the decreasing trend of body weight, thymus/spleen index and hematological parameters induced by CTX. Compared with immunosuppressive mice induced by CTX, SBT pulp oil could enhance NK cytotoxicity, macrophage phagocytosis, and T lymphocyte proliferation, and regulate the proportion of T cell subsets in mesenteric lymph nodes (MLN), and promote the production of secretory immunoglobulin A (sIgA), IFN-γ, IL-2, IL-4, IL-12 and TNF-α in the intestines. In addition, SBT pulp oil can promote the production of short fatty acids (SCFAs), increase the diversity of gut microbiota, improve the composition of intestinal flora, increase the abundance of Alistipes, Bacteroides, Anaerotruncus, Lactobacillus, ASF356, and Roseburia, while decreasing the abundance of Mucispirillum, Anaeroplasma, Pelagibacterium, Brevundimonas, Ochrobactrum, Acinetobacter, Ruminiclostridium, Blautia, Ruminiclostridium, Oscillibacter, and Faecalibaculum. This study shows that SBT pulp oil can regulate the diversity and composition of intestinal microflora in CTX-induced immunosuppressive Balb/c mice, thus enhancing the intestinal mucosa and systemic immune response. The results can provide a basis for understanding the function of SBT pulp oil and its application as a new probiotic and immunomodulator.


Subject(s)
Cyclophosphamide/adverse effects , Hippophae/chemistry , Immunomodulating Agents/administration & dosage , Immunosuppressive Agents/adverse effects , Inflammation/drug therapy , Plant Oils/administration & dosage , Animals , Female , Gastrointestinal Microbiome/drug effects , Humans , Immunocompromised Host/drug effects , Inflammation/etiology , Inflammation/immunology , Intestinal Mucosa/drug effects , Intestinal Mucosa/microbiology , Mice , Mice, Inbred BALB C
6.
Mol Cell Proteomics ; 20: 100051, 2021.
Article in English | MEDLINE | ID: mdl-33549647

ABSTRACT

SDS is widely used in sample preparation for proteomic research. However, SDS is incompatible with LC and electrospray ionization. SDS depletion is therefore required ahead of LC-MS analysis. Most of current SDS removal strategies are time consuming, laborious, and have low reproducibility. Here, we describe a method, SDS-cyclodextrin (CD)-assisted sample preparation, by which CD can bind to SDS and form CD-SDS complexes in solutions, allowing for direct tryptic digestion. We demonstrate that SDS-CD-assisted sample preparation is a simple, fast, and robust SDS-based sample preparation method for proteomics application.


Subject(s)
Proteomics/methods , Animals , Cell Line , Cyclodextrins/chemistry , Humans , Mice, Inbred C57BL , Sodium Dodecyl Sulfate/chemistry , Trypsin/chemistry
7.
Ann Hum Biol ; 47(7-8): 620-628, 2020 Dec.
Article in English | MEDLINE | ID: mdl-33059477

ABSTRACT

BACKGROUND: Mongolian populations are widely distributed geographically, showing abundant ethnic diversity with geographic and tribal differences. AIM: To infer the genetic substructure, admixture and ancient genetic sources of Mongolians together with Kazakhs. SUBJECTS AND METHODS: We genotyped more than 690,000 genome-wide SNPs from 33 Mongolian and Chinese Kazakh individuals and compared these with both ancient and present-day Eurasian populations using Principal Component Analysis (PCA), ADMIXTURE, Refine-IBD, f statistics, qpWave and qpAdm. RESULTS: We found genetic substructures within Mongolians corresponding to Ölöd, Chahar, and Inner Mongolian clusters, which was consistent with tribe classifications. Mongolian and Kazakh groups derived about 6-40% of West Eurasian related ancestry, most likely from Bronze Age Steppe populations. The East Asian related ancestry in Mongolian and Kazakh groups was well represented by the Neolithic DevilsCave related nomadic lineage, comprising 42-64% of studied groups. We also detected 10-51% of Han Chinese related ancestry in Mongolian and Kazakh groups, especially in Inner Mongolians. The average admixture times for Inner Mongolian, Mongolian_Chahar, Mongolian_Ölöd and Chinese Kazakh were about 1381, 626, 635 and 632 years ago, respectively, with Han and French as the sources. CONCLUSION: The DevilsCave related ancestry was once widespread westwards covering a wide geographical range from Far East Russia to the Mongolia Plateau. The formation of present-day Mongolic and Turkic-speaking populations has also received genetic influence from agricultural expansion.


Subject(s)
Genotype , Polymorphism, Single Nucleotide , China/ethnology , Female , Humans , Kazakhstan/ethnology , Male , Mongolia/ethnology
8.
BMC Genomics ; 21(1): 575, 2020 Aug 24.
Article in English | MEDLINE | ID: mdl-32831017

ABSTRACT

BACKGROUND: Cotton (Gossypium spp.) is the most important world-wide fiber crop but salt stress limits cotton production in coastal and other areas. Growth regulation factors (GRFs) play regulatory roles in response to salt stress, but their roles have not been studied in cotton under salt stress. RESULTS: We identified 19 GRF genes in G. raimondii, 18 in G. arboreum, 34 in G. hirsutum and 45 in G. barbadense, respectively. These GRF genes were phylogenetically analyzed leading to the recognition of seven GRF clades. GRF genes from diploid cottons (G. raimondii and G. arboreum) were largely retained in allopolyploid cotton, with subsequent gene expansion in G. barbadense relative to G. hirsutum. Most G. hirsutum GRF (GhGRF) genes are preferentially expressed in young and growing tissues. To explore their possible role in salt stress, we used qRT-PCR to study expression responses to NaCl treatment, showing that five GhGRF genes were down-regulated in leaves. RNA-seq experiments showed that seven GhGRF genes exhibited decreased expression in leaves under NaCl treatment, three of which (GhGRF3, GhGRF4, and GhGRF16) were identified by both RNA-seq and qRT-PCR. We also identified six and three GRF genes that exhibit decreased expression under salt stress in G. arboreum and G. barbadense, respectively. Consistent with its lack of leaf withering or yellowing under the salt treatment conditions, G. arboreum had better salt tolerance than G. hirsutum and G. barbadense. Our results suggest that GRF genes are involved in salt stress responses in Gossypium. CONCLUSION: In summary, we identified candidate GRF genes that were involved in salt stress responses in cotton.


Subject(s)
Gene Expression Regulation, Plant , Gossypium , Gossypium/genetics , Gossypium/metabolism , Phylogeny , Plant Proteins/genetics , Plant Proteins/metabolism , Salt Stress
9.
Huan Jing Ke Xue ; 40(12): 5503-5514, 2019 Dec 08.
Article in Chinese | MEDLINE | ID: mdl-31854623

ABSTRACT

Eutrophic aquaculture ponds are important methane (CH4) sources. In order to quantify CH4 emission characteristics and its influencing factors over aquaculture ponds, we conducted several intensive observations over two ponds located in Quanjiao County, Anhui Province, in 2018. The ebullition and diffusion flux of CH4 were measured in two seasons (winter and spring) using the inverted-funnel and bulk diffusion model, respectively. In winter, the CH4 ebullition flux during the daytime was higher than that at night (almost zero), whereas the diurnal pattern was found to be reversed in spring. Seasonally, the CH4 ebullition flux over the ponds was significantly lower in winter[3.92 mg·(m2·d)-1] than in spring[106.94 mg·(m2·d)-1], while the diffusion flux in winter[2.81 mg·(m2·d)-1] was slightly higher than in spring[0.87 mg·(m2·d)-1]. The CH4 ebullition and diffusion flux can be significantly controlled by natural factors such as water temperature and air pressure. It was revealed that the CH4ebullition flux in the studied ponds increased exponentially with increasing water temperature, and increased linearly with decreasing air pressure. Furthermore, we found that artificial management measures (i.e., winter drainage and spring manure treatment) could significantly enhance the CH4 ebullition flux rather than diffusion flux. For instance, the CH4 ebullition flux was found to increase with water depth decrease during the winter drainage period, while in the spring, the CH4 ebullition flux could reach as high as 1002.30 mg·(m2·d)-1 with chicken manure applicated. This study can provide data support for assessing the contribution of small ponds to the global carbon cycle.


Subject(s)
Aquaculture , Methane , Ponds , Carbon Dioxide , Seasons , Temperature
10.
J Clin Lab Anal ; 33(4): e22850, 2019 May.
Article in English | MEDLINE | ID: mdl-30758083

ABSTRACT

BACKGROUND: Neuropilins (Nrps) are a new type of broad-spectrum tumor marker. Currently, a method for accurate simultaneous quantification of Nrps is not available. We aimed to develop a bead-based and duplexed flow cytometric assay that could be used for accurate and simultaneous quantification of Nrp1 and Nrp2 for scientific research or clinical diagnosis. METHODS: We coupled anti-human Nrp1-11# mAb and anti-human Nrp2-C3 mAb to magnetic beads 18# and 25#, respectively. Capturing antibodies and detecting antibodies were then combined to detect Nrps by a bead-based Luminex assay, which was subsequently applied to quantify Nrps in clinical serum samples. RESULTS: The results showed that the detection value of Nrps ranged from 10 to 100 000 pg/mL for Nrp1 and from 25 to 100 000 pg/mL for Nrp2. The detection sensitivity reached 10 pg/mL for Nrp1 and 24.8 pg/mL for Nrp2. Intra-assay variances ranged from 1.0% to 2.6% for Nrp1 and from 2.9% to 4.0% for Nrp2, and interassay variances ranged from 1.5% to 6.4% for Nrp1 and from 4.2% to 8.1% for Nrp2. The Nrp1 and Nrp2 recoveries were 96.6%-103.6% and 95.6%-102.3%, respectively. Irrelevant antigens had no interference in the paired-detection system, and the mean fluorescence intensity (MFI) values were stable for months. CONCLUSION: A bead-based, duplexed flow cytometric assay (xMAP® technology) was developed to detect Nrp1 and Nrp2. The assay provided rapid, high-throughput results and was much more sensitive, specific, reproducible, and stable than existing assays. In addition, this assay could be applied in early-stage cancer screening, tumor malignancy analysis, and prognosis assessment.


Subject(s)
Immunoassay/methods , Neuropilin-1/blood , Neuropilin-2/blood , Antibodies, Monoclonal , Biomarkers, Tumor/blood , Biomarkers, Tumor/immunology , Biotinylation , Cross Reactions , Enzyme-Linked Immunosorbent Assay , Humans , Immunoassay/instrumentation , Neoplasms/blood , Neuropilin-1/immunology , Neuropilin-2/immunology , Reproducibility of Results , Sensitivity and Specificity
11.
Huan Jing Ke Xue ; 40(2): 573-581, 2019 Feb 08.
Article in Chinese | MEDLINE | ID: mdl-30628319

ABSTRACT

Stable hydrogen and oxygen isotopic compositions in precipitation are good tracers and can provide unique information about the water cycle. Precipitation samples were collected at the Nanjing, Liyang, Yixing, and Dongshan sites in 2016, and the HDO and H218O compositions of precipitation were measured. The temporal variability of HDO and H218O compositions and deuterium-excess of precipitation were analyzed, and the influence of the water vapor source and local evaporation on stable isotopic composition of precipitation were discussed. The results indicated that:① Seasonal variations in the HDO composition, H218O composition, and deuterium-excess of precipitation occurred due to different water vapor sources during the summer and winter monsoon seasons. The HDO and H218O compositions were depleted during the summer monsoon season and enriched during the winter monsoon season. The deuterium-excess during the summer monsoon season was lower compared to the winter monsoon season. ② During the summer monsoon, the evaporation of Lake Taihu made the deuterium-excess of downwind precipitation and the downwind intercept of the local meteoric water line higher. During the winter monsoon season, local evaporation had little influence on HDO and H218O components in precipitation. ③ Both of the intercepts and slopes of the local meteoric water line were higher than those of the global meteoric water line, due to moisture recycling during the winter monsoon season and different water vapor sources between the summer and winter monsoon seasons.

12.
Neural Regen Res ; 13(10): 1842-1850, 2018 Oct.
Article in English | MEDLINE | ID: mdl-30136701

ABSTRACT

The mitogen-activated protein kinase (MAPK) signaling pathway plays an important role in the regulation of cell growth, proliferation, differentiation, transformation and death. Mitogen-activated protein kinase phosphatase 1 (MKP1) has an inhibitory effect on the p38MAPK and JNK pathways, but it is unknown whether it plays a role in Aß-induced oxidative stress and neuronal inflammation. In this study, PC12 cells were infected with MKP1 shRNA, MKP1 lentivirus or control lentivirus for 12 hours, and then treated with 0.1, 1, 10 or 100 µM amyloid beta 42 (Aß42). The cell survival rate was measured using the cell counting kit-8 assay. MKP1, tumor necrosis factor-alpha (TNF-α) and interleukin-1ß (IL-1ß) mRNA expression levels were analyzed using quantitative real time-polymerase chain reaction. MKP1 and phospho-c-Jun N-terminal kinase (JNK) expression levels were assessed using western blot assay. Reactive oxygen species (ROS) levels were detected using 2',7'-dichlorofluorescein diacetate. Mitochondrial membrane potential was measured using flow cytometry. Superoxide dismutase activity and malondialdehyde levels were evaluated using the colorimetric method. Lactate dehydrogenase activity was measured using a microplate reader. Caspase-3 expression levels were assessed by enzyme-linked immunosorbent assay. Apoptosis was evaluated using the terminal deoxynucleotidyl transferase dUTP nick end labeling method. MKP1 overexpression inhibited Aß-induced JNK phosphorylation and the increase in ROS levels. It also suppressed the Aß-induced increase in TNF-α and IL-1ß levels as well as apoptosis in PC12 cells. In contrast, MKP1 knockdown by RNA interference aggravated Aß-induced oxidative stress, inflammation and cell damage in PC12 cells. Furthermore, the JNK-specific inhibitor SP600125 abolished this effect of MKP1 knockdown on Aß-induced neurotoxicity. Collectively, these results show that MKP1 mitigates Aß-induced apoptosis, oxidative stress and neuroinflammation by inhibiting the JNK signaling pathway, thereby playing a neuroprotective role.

13.
Huan Jing Ke Xue ; 39(2): 691-702, 2018 Feb 08.
Article in Chinese | MEDLINE | ID: mdl-29964832

ABSTRACT

To quantify the ratio of CH4 ebullition to total flux in subtropical shallow ponds, the CH4 flux at the water-air interface was measured using the inverted-funnel and water equilibrium methods in two small ponds in Quanjiao, Anhui Province from July 28 to August 13, 2016. The average CH4 ebullition fluxes were 121.78 and 161.08 mg·(m2·d)-1 and the average diffusion fluxes were 3.38 and 3.79 mg·(m2·d)-1 over pond A and pond B, respectively. The ebullition flux accounted for 97.5% and 96.4% of the total flux over pond A and pond B, respectively. Methane ebullition ranged from 0.11 to 446.90 mg·(m2·d)-1 over pond A and from 0.05 to 607.51 mg·(m2·d)-1 over pond B. Gas ebullition rate during the day was higher than that at night and was controlled by wind speed. Methane ebullition flux was influenced by wind speed over the shallow pond at hourly scale and by water depth and wind speed at daily scale, with positive correlation with wind speed and negative correlation with water depth. Varying with latitude, methane ebullition flux was higher for the water bodies in the mid-latitude region compared to those in the high-latitude region. Direct observations of the methane ebullition flux over small ponds provide data support and theoretical reference to precisely estimate the contribution of inland water bodies to regional and global carbon cycle.

14.
Huan Jing Ke Xue ; 39(8): 3713-3718, 2018 Aug 08.
Article in Chinese | MEDLINE | ID: mdl-29998678

ABSTRACT

A nanostructured Co3O4/BiVO4 composite photoanode was synthesized using a facile electrospinning method and applied to photoelectrochemical (PEC) degradation of bisphenol A (BPA) with the assistance of peroxymonosulfate (PMS). Results show that PMS obviously enhanced the photoelectrocatalytic degradation of BPA by the Co3O4/BiVO4 composite photoanode. When at 0.25 V bias potential and visible light irradiation, with 2 mmol·L-1 PMS addition, 96% of BPA was removed within 2 h, and the corresponding kinetic constant was 0.4714 min-1. The effects of initial PMS concentration and bias potential on the BPA degradation were studied. Results show that BPA could be efficiently degraded at lower PMS concentrations and lower bias potentials. SO4·- and·OH were identified as the primary free radicals using an electron spin resonance spectrometer. Free radical quenching experiments were carried out, and the photogenerated hole, SO4·-, and·OH proved to be responsible for the BPA oxidation. There was no metal ion leaching detected in the solution after the reactions, which means the secondary pollution could be avoided.

16.
Physiol Plant ; 158(2): 200-12, 2016 Oct.
Article in English | MEDLINE | ID: mdl-27080593

ABSTRACT

Cotton fiber is proposed to share some similarity with the Arabidopsis thaliana leaf trichome, which is regulated by the MYB-bHLH-WD40 transcription complex. Although several MYB transcription factors and WD40 family proteins in cotton have been characterized, little is known about the role of bHLH family proteins in cotton. Here, we report that GhDEL65, a bHLH protein from cotton (Gossypium hirsutum), is a functional homologue of Arabidopsis GLABRA3 (GL3) and ENHANCER OF GLABRA3 (EGL3) in regulating trichome development. Transcripts of GhDEL65 were detected in 0 ∼ 1 days post-anthesis (DPA) ovules and abundant in 3-DPA fibers, implying that GhDEL65 may act in early fiber development. Ectopic expression of GhDEL65 in Arabidopsis gl3 egl3 double mutant partly rescued the trichome development, and constitutive expression of GhDEL65 in wild-type plants led to increased trichome density on rosette leaves and stems, mainly by activating the transcription of two key positive regulators of trichome development, GLABRA1 (GL1) and GLABRA2 (GL2), and suppressed the expression of a R3 single-repeat MYB factor TRIPTYCHON (TRY). GhDEL65 could interact with cotton R2R3 MYB transcription factors GhMYB2 and GhMYB3, as well as the WD40 protein GhTTG3, suggesting that the MYB-bHLH-WD40 protein complex also exists in cotton fiber cell, though its function in cotton fiber development awaits further investigation.


Subject(s)
Arabidopsis/genetics , Basic Helix-Loop-Helix Transcription Factors/metabolism , Gossypium/genetics , Amino Acid Sequence , Arabidopsis/cytology , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Basic Helix-Loop-Helix Transcription Factors/genetics , Cotton Fiber , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Gossypium/cytology , Gossypium/metabolism , Phylogeny , Plant Leaves/cytology , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Stems/cytology , Plant Stems/genetics , Plant Stems/metabolism , Plants, Genetically Modified , Sequence Alignment , Trichomes , Two-Hybrid System Techniques
17.
Nat Commun ; 5: 5519, 2014 Nov 21.
Article in English | MEDLINE | ID: mdl-25413731

ABSTRACT

Cotton fibres are unusually long, single-celled epidermal seed trichomes and a model for plant cell growth, but little is known about the regulation of fibre cell elongation. Here we report that a homeodomain-leucine zipper (HD-ZIP) transcription factor, GhHOX3, controls cotton fibre elongation. GhHOX3 genes are localized to the 12th homoeologous chromosome set of allotetraploid cotton cultivars, associated with quantitative trait loci (QTLs) for fibre length. Silencing of GhHOX3 greatly reduces (>80%) fibre length, whereas its overexpression leads to longer fibre. Combined transcriptomic and biochemical analyses identify target genes of GhHOX3 that also contain the L1-box cis-element, including two cell wall loosening protein genes GhRDL1 and GhEXPA1. GhHOX3 interacts with GhHD1, another homeodomain protein, resulting in enhanced transcriptional activity, and with cotton DELLA, GhSLR1, repressor of the growth hormone gibberellin (GA). GhSLR1 interferes with the GhHOX3-GhHD1 interaction and represses target gene transcription. Our results uncover a novel mechanism whereby a homeodomain protein transduces GA signal to promote fibre cell elongation.


Subject(s)
Gossypium/growth & development , Homeodomain Proteins/metabolism , Leucine Zippers/physiology , Plant Proteins/metabolism , Trichomes/growth & development , Cotton Fiber , Gene Expression Profiling , Gene Expression Regulation, Developmental , Gene Expression Regulation, Plant , Gibberellins/metabolism , Histone Deacetylases/metabolism , Molecular Sequence Data , Plant Growth Regulators/metabolism , Quantitative Trait Loci
18.
Trop Anim Health Prod ; 44(8): 1821-6, 2012 Dec.
Article in English | MEDLINE | ID: mdl-22528531

ABSTRACT

Staphylococcus aureus is recognized worldwide as a pathogen causing many serious diseases in humans and animals and is one of the most common etiological agents of clinical and subclinical bovine mastitis. The purpose of this study was to determine the presence of genes encoding clfA, fnbA, fnbB, cap5, cap8, hla, hlb, nuc, sea, and tst of S. aureus strains (n = 39) isolated from bovine clinical mastitis in Guangxi by polymerase chain reaction amplification. The results of the present study indicated that all isolates were found to contain one or more virulence-associated genes. The most frequently encountered genes were fnbA (97 %) and nuc (90 %), followed by hla (85 %) and hlb (82 %), respectively. None of the investigated S. aureus strains harbored fnbB and sea genes. The data in the present study showed a relatively wide distribution of the genes fnbA and nuc among the investigated isolates, indicating that they play an important role on bovine mastitis pathogenesis. The study provides a valuable insight into the virulence-associated genes of this important pathogen.


Subject(s)
Bacterial Proteins/genetics , Bacterial Toxins/genetics , Mastitis, Bovine/epidemiology , Staphylococcal Infections/veterinary , Staphylococcus aureus/genetics , Staphylococcus aureus/pathogenicity , Animals , Cattle , China/epidemiology , Female , Mastitis, Bovine/microbiology , Polymerase Chain Reaction/veterinary , Sequence Analysis, DNA , Staphylococcal Infections/epidemiology , Staphylococcal Infections/microbiology , Staphylococcus aureus/isolation & purification , Virulence
19.
Zhejiang Da Xue Xue Bao Yi Xue Ban ; 37(5): 515-8, 2008 09.
Article in Chinese | MEDLINE | ID: mdl-18925722

ABSTRACT

OBJECTIVE: To assess the feasibility of gray-scale contrast-enhanced ultrasound for characterizing thyroid nodules. METHODS: Forty thyroid nodules from 35 patients were studied both by conventional techniques and gray-scale contrast-enhanced ultrasound. Of the nodules examined, 15 were benign and 25 malignant. The enhancement of echogenicity was evaluated. The diagnosis was confirmed by surgical biopsy and histopathological examination. RESULTS: The study using gray-scale contrast-enhanced ultrasound showed absent contrast-enhancement in 9 of 25 malignant nodules and 1 of 11 benign solitary nodules; intense enhancement in 6 of 25 malignant nodules, with perfusion defect in the center; diffuse faint enhancement in 10 of 25 malignant nodules and 10 of 11 benign solitary nodules. Benign cystic nodules all showed absent enhancement in the cystic components and 2 of 4 intense enhancement in the solitary components. CONCLUSIONS: Gray-scale contrast-enhanced ultrasonography imaging may be a useful tool for evaluating the perfusion of thyroid nodules. Solitary nodules showing absent enhancement or intense enhancement with absent enhancement in the nodular center may suggest malignant.


Subject(s)
Image Enhancement/methods , Thyroid Neoplasms/diagnostic imaging , Thyroid Nodule/diagnostic imaging , Contrast Media , Diagnosis, Differential , Female , Humans , Male , Thyroid Neoplasms/pathology , Thyroid Nodule/pathology , Ultrasonography/methods
20.
Sheng Wu Gong Cheng Xue Bao ; 23(2): 262-7, 2007 Mar.
Article in Chinese | MEDLINE | ID: mdl-17460899

ABSTRACT

with chitosan in situ using a chemical method and a porous structure obtained was then lyophilized. Preosteoblast MC 3T3-E1 the scaffolds was examined after staining it with Wright's stain. Their proliferation was assessed using MTZ assay. After being Abstract Nanohydroxyapatite/chitosan composite scaffolds were fabricated and the proliferation and differentiation of preosteoblast MC 3T3-E1 on them were examined for the assessment of their biocompatibility. Nanohydroxyapatite was combined with chitosan in situ using a chemical method and a porous structure obtained was then lyophilized. Preosteoblast MC 333-E1 cells were inoculated into the porous composite scaffolds and chitosan scaffolds, respectively. The morphology of cells cultured on the scaffolds was examined after staining it with Wright's stain. Their proliferation was assessed using MTT assay. After being cultured in conditioned medium for 30 days, the cells' alkaline phosphatase activities on the scaffolds were studied in situ to compare their differentiation levelabout. Moreover, the alkaline phosphatase activities were assessed with a kit. The expression level of characteristic osteogenic gene was evaluated using Reverse Transcription-Polymerase Chain Reaction (RT-PCR). The results indicated that MC 3T3-E1 cells grown on the composite scaffolds showed a higher proliferation rate and spread better than that on chitosan scaffolds. The alkaline phosphatase stain results showed that the alkaline phosphatase activity of cells on composite scaffolds was significantly higher than that on the chitosan scaffolds. In addition, the quantitative examination of alkaline phosphatase activity indicated that the cells cultured on the composite scaffolds expressed an activity level about 8 times higher than that on chitosan scaffolds. Simultaneously, the osteogenic gene osteopontin (OPN) of cells cultured on composite scaffolds showed a higher expression level than that on chitosan scaffolds. Another osteogenic gene osteocalcin (OC) was expressed in cells cultured on composite scaffolds, whereas it was not detected in cells on chitosan scaffolds. The addition of nanohydroxyapatite in the scaffolds improved not only the proliferation but also the differentiation of preosteoblast cultured on them. The composite scaffolds showed good biocompatibility and bioactivity. These scaffolds would be promising in bone tissue engineering.


Subject(s)
Cell Differentiation , Cell Proliferation , Chitosan/chemistry , Durapatite/chemistry , Tissue Scaffolds/chemistry , Alkaline Phosphatase/metabolism , Animals , Biocompatible Materials/chemistry , Cell Culture Techniques/methods , Cell Line , Gene Expression , Mice , Nanostructures , Osteoblasts/cytology , Osteoblasts/metabolism , Osteocalcin/genetics , Osteopontin/genetics , Porosity , Reverse Transcriptase Polymerase Chain Reaction , Tissue Engineering/methods
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