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1.
Comput Intell Neurosci ; 2022: 8917964, 2022.
Article in English | MEDLINE | ID: mdl-35401719

ABSTRACT

Person reidentification (ReID) is a challenging computer vision task for identifying or verifying one or more persons when the faces are not available. In ReID, the indistinguishable background usually affects the model's perception of the foreground, which reduces the performance of ReID. Generally, the background of the same camera is similar, whereas that of different cameras is quite different. Based on this finding, we propose a template-aware transformer (TAT) method which can learn intersample indistinguishable features by introducing a learnable template for the transformer structure to cut down the model's attention to regions of the image with low discrimination, including backgrounds and occlusions. In the multiheaded attention module of the encoder, this template directs template-aware attention to indistinguishable features of the image and gradually increases the attention to distinguishable features as the encoder block deepens. We also increase the number of templates using side information considering the characteristics of ReID tasks to adapt the model to backgrounds that vary significantly with different camera IDs. Finally, we demonstrate the validity of our theories using various public data sets and achieve competitive results via a quantitative evaluation.

2.
J Magn Reson Imaging ; 55(3): 803-814, 2022 03.
Article in English | MEDLINE | ID: mdl-34355834

ABSTRACT

BACKGROUND: CD8+ T cell in pancreatic ductal adenocarcinoma (PDAC) is closely related to the prognosis and treatment response of patients. Accurate preoperative CD8+ T-cell expression can better identify the population benefitting from immunotherapy. PURPOSE: To develop and validate a machine learning classifier based on noncontrast magnetic resonance imaging (MRI) for the preoperative prediction of CD8+ T-cell expression in patients with PDAC. STUDY TYPE: Retrospective cohort study. POPULATION: Overall, 114 patients with PDAC undergoing MR scan and surgical resection; 97 and 47 patients in the training and validation cohorts. FIELD STRENGTH/SEQUENCE/3 T: Breath-hold single-shot fast-spin echo T2-weighted sequence and noncontrast T1-weighted fat-suppressed sequences. ASSESSMENT: CD8+ T-cell expression was quantified using immunohistochemistry. For each patient, 2232 radiomics features were extracted from noncontrast T1- and T2-weighted images and reduced using the Wilcoxon rank-sum test and least absolute shrinkage and selection operator method. Linear discriminative analysis was used to construct radiomics and mixed models. Model performance was determined by its discriminative ability, calibration, and clinical utility. STATISTICAL TESTS: Kaplan-Meier estimates, Student's t-test, the Kruskal-Wallis H test, and the chi-square test, receiver operating characteristic curve, and decision curve analysis. RESULTS: A log-rank test showed that the survival duration in the CD8-high group (25.51 months) was significantly longer than that in the CD8-low group (22.92 months). The mixed model included all MRI characteristics and 13 selected radiomics features, and the area under the curve (AUC) was 0.89 (95% confidence interval [CI], 0.77-0.92) and 0.69 (95% CI, 0.53-0.82) in the training and validation cohorts. The radiomics model included 13 radiomics features, which showed good discrimination in the training cohort (AUC, 0.85; 95% CI, 0.77-0.92) and the validation cohort (AUC, 0.76; 95% CI, 0.61-0.87). DATA CONCLUSIONS: This study developed a noncontrast MRI-based radiomics model that can preoperatively determine CD8+ T-cell expression in patients with PDAC and potentially immunotherapy planning. EVIDENCE LEVEL: 5 TECHNICAL EFFICACY: Stage 2.


Subject(s)
Adenocarcinoma , Pancreatic Neoplasms , CD8-Positive T-Lymphocytes , Humans , Magnetic Resonance Imaging/methods , Pancreatic Neoplasms/diagnostic imaging , Retrospective Studies , Pancreatic Neoplasms
3.
J Magn Reson Imaging ; 52(4): 1124-1136, 2020 10.
Article in English | MEDLINE | ID: mdl-32343872

ABSTRACT

BACKGROUND: Endoscopic ultrasound-guided fine-needle aspiration is associated with the accurate determination of tumor grade. However, because it is an invasive procedure there is a need to explore alternative noninvasive procedures. PURPOSE: To develop and validate a noncontrast radiomics model for the preoperative prediction of nonfunctional pancreatic neuroendocrine tumor (NF-pNET) grade (G). STUDY TYPE: Retrospective, single-center study. SUBJECTS: Patients with pathologically confirmed PNETs (139) were included. FIELD STRENGTH/SEQUENCE: 3T/breath-hold single-shot fast-spin echo T2 -weighted sequence and unenhanced and dynamic contrast-enhanced T1 -weighted fat-suppressed sequences. ASSESSMENT: Tumor features on contrast MR images were evaluated by three board-certified abdominal radiologists. STATISTICAL TESTS: Multivariable logistic regression analysis was used to develop the clinical model. The least absolute shrinkage and selection operator method and linear discriminative analysis (LDA) were used to select the features and to construct a radiomics model. The performance of the models was assessed using the training cohort (97 patients) and the validation cohort (42 patients), and decision curve analysis (DCA) was applied for clinical use. RESULTS: The clinical model included 14 imaging features, and the corresponding area under the curve (AUC) was 0.769 (95% confidence interval [CI], 0.675-0.863) in the training cohort and 0.729 (95% CI, 0.568-0.890) in the validation cohort. The LDA included 14 selected radiomics features that showed good discrimination-in the training cohort (AUC, 0.851; 95% CI, 0.758-0.916) and the validation cohort (AUC, 0.736; 95% CI, 0.518-0.874). In the decision curves, if the threshold probability was 0.17-0.84, using the radiomics score to distinguish NF-pNET G1 and G2/3, offered more benefit than did the use of a treat-all-patients or treat-none scheme. DATA CONCLUSION: The developed radiomics model using noncontrast MRI could help differentiate G1 and G2/3 tumors, to make the clinical decision, and screen pNETs grade. LEVEL OF EVIDENCE: 4 TECHNICAL EFFICACY STAGE: 2 J. Magn. Reson. Imaging 2020;52:1124-1136.


Subject(s)
Magnetic Resonance Imaging , Pancreatic Neoplasms , Area Under Curve , Cohort Studies , Humans , Pancreatic Neoplasms/diagnostic imaging , Retrospective Studies
4.
Acad Radiol ; 27(12): e272-e281, 2020 12.
Article in English | MEDLINE | ID: mdl-32037260

ABSTRACT

RATIONALE AND OBJECTIVES: Tumor grading of nonfunctional pancreatic neuroendocrine tumors (NF-pNETs) determines the choice of clinical treatment and management. The pathological grade of pancreatic neuroendocrine tumors is usually assessed on postoperative specimens. The goal of our study is to establish a tumor grade (G) prediction model for preoperative G1/2 NF-pNETs using radiomics for multislice spiral CT image analysis. MATERIALS AND METHODS: This retrospective study included a primary cohort of 59 patients and an independent validation cohort of 40 consecutive patients; their multislice spiral CT images were collected from October 2012 to October 2016 and October 2016 to June 2018, respectively. All 99 patients were diagnosed with clinicopathologically confirmed NF-pNETs. Most significant radiomic features were selected using the minimum redundancy and maximum relevance algorithm. Support vector machine classifier with a radial basis function-based predictive model was subsequently developed for clinical use. RESULTS: A total of 585 radiomics features were extracted from every phase for each patient. Six of these radiomics features were identified as most discriminant features for G1 and G2 tumors and used to construct the tumor grade prediction model. The prediction model resulted in the area under the curve values of 0.968 (95% CI: 0.900-0.991) and 0.876 (95% CI: 0.700-0.963) for the training cohort and validation cohort, respectively. Sensitivity and specificity were 96.4% and 83.9%, and 90.9% and 88.9% for the training and validation cohorts, respectively. The decision curves indicated that if the threshold probability is above 0.1, using the rad-score in the current study on G1/2 NF-pNETs is more beneficial than the treat-all-patients scheme or the treat-none scheme. CONCLUSION: Radiomics developed with a combination of nonenhanced and portal venous phases can achieve favorable predictive accuracy for histological grade for G1/G2 NF-pNETs.


Subject(s)
Pancreatic Neoplasms , Tomography, X-Ray Computed , Humans , Neoplasm Grading , Pancreatic Neoplasms/diagnostic imaging , Retrospective Studies , Sensitivity and Specificity
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