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J Gen Appl Microbiol ; 56(2): 143-9, 2010 Apr.
Article in English | MEDLINE | ID: mdl-20513962

ABSTRACT

Strain LXD30(T) was isolated from rhizosphere soil of a plant of the species Camptotheca acuminata Decne which is native to warm, humid stream banks in southern China. Analysis of the 16S rRNA gene sequence revealed that the Gram-negative, rod-shaped bacterium fell within the realm of the genus Rhizobium and was most closely related to Rhizobium huautlense SO2(T) (96.4% sequence similarity) and Rhizobium cellulosilyticum LMG 23642(T) (96.4%). The isolate grew optimally at pH7.0 and 25-28 degrees C in the presence of 0-1% (w/v) NaCl. Major fatty acids were C16:0 (17.5%) and summed feature 7 (C18:1omega7c/omega9t/omega12t, 58.3%). Unequivocally low 16S rRNA (<97%), recA (<92%) and atpD (<90%) gene sequence similarities to all existing species of the genus and phenotypic characteristics all suggested that strain LXD30(T) (=KCTC 22609(T)=CGMCC 1.8903(T)) represents a novel Rhizobium species, for which the name Rhizobium kunmingense sp. nov. is proposed.


Subject(s)
Camptotheca/microbiology , Plant Roots/microbiology , Rhizobium/classification , Rhizobium/isolation & purification , Soil Microbiology , Bacterial Proteins/genetics , Bacterial Typing Techniques , China , DNA, Bacterial/analysis , DNA, Ribosomal/analysis , Genes, rRNA , Molecular Sequence Data , Phenotype , Phylogeny , RNA, Ribosomal, 16S/genetics , Rhizobium/genetics , Rhizobium/physiology , Sequence Analysis, DNA , Species Specificity
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