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1.
PLoS One ; 14(5): e0214777, 2019.
Article in English | MEDLINE | ID: mdl-31116757

ABSTRACT

Emission from ruminants has become one of the largest sources of anthropogenic methane emission in China. The structure of the rumen flora has a significant effect on methane production. To establish a more accurate prediction model for methane production, the rumen flora should be one of the most important parameters. The objective of the present study was to investigate the relationship among changes in rumen flora, nutrient levels, and methane production in sheep fed with the diets of different forage-to-concentration ratios, as well as to screen for significantly different dominant genera. Nine rumen-cannulated hybrid sheep were separated into three groups and fed three diets with forage-to-concentration ratios of 50:50, 70:30, and 90:10. Three proportions of the diets were fed according to a 3 × 3 incomplete Latin square, design during three periods of 15d each. The ruminal fluid was collected for real-time polymerase chain reaction (real-time PCR), high-throughput sequencing and in vitro rumen fermentation in a new real-time fermentation system wit. Twenty-two genera were screened, the abundance of which varied linearly with forage-to-concentration ratios and methane production. In addition, during the 12-hour in vitro fermentation, the appearance of peak concentration was delayed by 26-27min with the different structure of rumen bacteria. The fiber-degrading bacteria were positively correlated with this phenomenon, but starch-degrading and protein-degrading bacteria were negative correlated. These results would facilitate macro-control of rumen microorganisms and better management of diets for improved nutrition in ruminants. In addition, our findings would help in screening bacterial genera that are highly correlated with methane production.


Subject(s)
Animal Feed/analysis , Diet/veterinary , Methane/metabolism , Rumen/microbiology , Animal Nutritional Physiological Phenomena , Animals , Bacteria/classification , Bacteria/genetics , Bacteria/isolation & purification , Fermentation , Fungi/classification , Fungi/genetics , Fungi/isolation & purification , Phylogeny , RNA, Ribosomal, 16S/chemistry , RNA, Ribosomal, 16S/genetics , RNA, Ribosomal, 16S/metabolism , Real-Time Polymerase Chain Reaction , Sheep
2.
Pancreas ; 43(3): 325-30, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24622059

ABSTRACT

Type 2 diabetes mellitus (T2DM) and obstructive sleep apnea (OSA) are both common major public health concerns. Epidemiological and clinical evidence postulates that OSA may be a causal factor in the pathogenesis of T2DM. This review examines recent empirical developments in theory, research, and practice regarding T2DM and OSA. We first examined the data from 10 studies that covered 281 patients with T2DM who used continuous positive airway pressure therapy, followed by research that describes how hypoxia/reoxygenation in OSA may be key triggers that initiate or contribute to the status of insulin resistance and inflammation. We then propose mechanisms that may relate diabetes with OSA. The issues that should be addressed in the future are outlined. We suggest that intervention with continuous positive airway pressure may improve diabetic symptoms and should be encouraged for patients with diabetes.


Subject(s)
Continuous Positive Airway Pressure/methods , Diabetes Mellitus, Type 2/therapy , Sleep Apnea, Obstructive/therapy , Cytokines/metabolism , Diabetes Mellitus, Type 2/metabolism , Diabetes Mellitus, Type 2/physiopathology , Humans , Hypoxia/physiopathology , Inflammation/physiopathology , Inflammation Mediators/metabolism , Insulin Resistance/physiology , Sleep Apnea, Obstructive/metabolism , Sleep Apnea, Obstructive/physiopathology , Treatment Outcome
3.
EMBO J ; 25(16): 3869-79, 2006 Aug 23.
Article in English | MEDLINE | ID: mdl-16902412

ABSTRACT

c-Myc (Myc) is highly expressed in developing embryos where it regulates body size by controlling proliferation but not cell size. However, Myc is also induced in many postmitotic tissues, including adult myocardium, in response to stress where the predominant form of growth is an increase in cell size (hypertrophy) and not number. The function of Myc induction in this setting is unproven. Therefore, to explore Myc's role in hypertrophic growth, we created mice where Myc can be inducibly inactivated, specifically in adult myocardium. Myc-deficient hearts demonstrated attenuated stress-induced hypertrophic growth, secondary to a reduction in cell growth of individual myocytes. To explore the dependence of Myc-induced cell growth on CycD2, we created bigenic mice where Myc can be selectively activated in CycD2-null adult myocardium. Myc-dependent hypertrophic growth and cell cycle reentry is blocked in CycD2-deficient hearts. However, in contrast to Myc-induced DNA synthesis, hypertrophic growth is independent of CycD2-induced Cdk2 activity. These data suggest that Myc is required for a normal hypertrophic response and that its growth-promoting effects are also mediated through a CycD2-dependent pathway.


Subject(s)
Cardiomegaly/pathology , Cyclins/physiology , Myocytes, Cardiac/pathology , Myocytes, Cardiac/physiology , Proto-Oncogene Proteins c-myc/physiology , Animals , Apoptosis , Cardiomegaly/metabolism , Cell Cycle , Cell Enlargement , Cell Proliferation , Cells, Cultured , Cyclin D2 , Cyclins/genetics , Isoproterenol/pharmacology , Mice , Mice, Transgenic , Myocardium/metabolism , Myocardium/pathology , Myocytes, Cardiac/drug effects , Proto-Oncogene Proteins c-myc/genetics
4.
J Anal Toxicol ; 29(3): 182-7, 2005 Apr.
Article in English | MEDLINE | ID: mdl-15842761

ABSTRACT

A high-performance liquid chromatography (HPLC) method for normal and formaldehyde-modified deoxynucleosides after hydrolysis of exposed and unexposed human placental DNA was compared with ultraviolet (UV), fluorescence (FL), and electrochemical (EC) detectors. The lower quantifiable limits (LQL) for UV detection at 254 nm were 10-22 pmol for N(6)-hydroxymethyldeoxyadenosine (N(6)-dA), N(2)-hydroxymethyldeoxyguanosine (N(2)-dG), and N(4)-hydroxymethyldeoxycytidine (N(4)-dC), with N(4)-dC having the highest LQL and the 2 purines the lowest LQL. Similarly, LQLs using FL (excitation: 264 nm; emission: 340 nm) were 14-30 pmol, with N(2)-dG having the lowest LQL and N(6)-dA the highest. The LQL for N(2)-dG by EC detection at +1.10 V was 27 pmol, over 50-fold greater sensitivity than for the other hydroxymethyl deoxynucleosides; deoxyguanosine was similarly detected more sensitively than the other normal deoxynucleosides. Percent relative standard deviations ranged between 6 and 13% for both intra- and interrun assays for all detectors. HPLC-UV allows all the deoxynucleosides to be detected without the flow cell washing and use of fresh solutions necessary for the more selective FL detection, the latter not having enzyme blank interferences. EC allows only deoxyguanosine and N(2)-dG to be detected at pmol levels with no blank interferences. HPLC-UV allowed more sensitive detection of N(2)-dG and N(6)-dA than the other techniques and is recommended. The UV, FL, and EC properties of the hydroxymethyl deoxynucleosides of dA, dG, and dC are reported for the first time.


Subject(s)
DNA Adducts/analysis , Formaldehyde/toxicity , Chromatography, High Pressure Liquid/methods , DNA/isolation & purification , Electrochemistry , Humans , In Vitro Techniques , Placenta/chemistry , Reference Standards , Reproducibility of Results , Sensitivity and Specificity , Spectrometry, Fluorescence , Spectrophotometry, Ultraviolet
5.
Biomed Chromatogr ; 18(7): 462-9, 2004 Sep.
Article in English | MEDLINE | ID: mdl-15340972

ABSTRACT

A sensitive and selective method was developed for the first time to quantify simultaneously the normal and formaldehyde (FA)-modified bases in human placental DNA treated with 100 ppm FA for 20 h at 37 degrees Celsius. Digestion of DNA to deoxynucleosides with DNase I, phosphodiesterase and alkaline phosphatase occurred in that order with centrifugation steps. The normal and FA-modified deoxynucleosides were then resolved from one another and reagent blank interferences to produce selective separation through high performance liquid chromatography-ultraviolet detection at 254 nm. A C(18) reversed-phase column facilitated the resolution using 5 mm ammonium acetate and a gradient of 0-6% methanol at fl ow rates of 0.3-1.4 mL/min before column cleaning. The lower quantifiable limits for deoxyadenosine, deoxyguanosine, deoxycytidine, thymidine, N(6)-hydroxymethyldeoxyadenosine (N(6)-dA), N(2)-hydroxymethyldeoxyguanosine (N(2)-dG) and N(4)-hydroxymethyldeoxycytidine (N(4)-dC) were 11, 7.6, 12, 15, 10, 10 and 22 pmol, respectively. The abundance order of the modified deoxynucleosides was N(6)-dA > N(2)-dG > N(4)-dC. dT did not form hydroxymethyl derivatives. The respective concentrations were about 6.0, 10.0 and 23 pmol of modified deoxynucleosides in 80 micro g of human placental DNA after treatment with 100 micro g/mL of formalin for 20 h at 37 degrees Celsius. The stabilities of N(6)-dA and N(2)-dG were much better at -20 degrees Celsius than at 25 degrees Celsius, where the respective halftimes were about 50.1 and 21.0 h.


Subject(s)
Chromatography, High Pressure Liquid/methods , Deoxyribonucleosides/analysis , Formaldehyde/chemistry , Spectrophotometry, Ultraviolet/methods , Deoxyribonucleosides/chemistry , Deoxyribonucleosides/isolation & purification , Female , Humans , Placenta/chemistry
6.
Mutat Res ; 563(1): 13-24, 2004 Sep 12.
Article in English | MEDLINE | ID: mdl-15324745

ABSTRACT

Formaldehyde (FA) is a mutagen that, at high concentrations and long durations, has been reported to cause nasal cancer in rats and in some humans. The level of FA-induced modified DNA in nasal cells should serve as a biomarker of FA exposure and effect. In the present study, a high-performance liquid chromatography (HPLC)-ultraviolet (UV) method at 254 nm was developed and optimized to detect and quantify hydroxymethyldeoxynucleosides after the isolated DNA in exposed human nasal epithelial cells (HNEC) was enzymically digested. Normal and modified deoxynucleosides were successfully resolved from one another and from tissue and enzyme blank interferences. The viability of HNEC exposed to FA in solution for 24 h decreased, and there was a linear dose response between % nonviability and FA dose from 10 to 500 microg/mL. Amounts of 18.0 +/- 1.5 pmol N6-dA and 12.0 +/- 1.2 pmol N2-dG derivatives were determined in a 10 microL injection after 1.4 x 10(7) HNEC (106 microg DNA) were exposed to 500 microg/mL in solution. The respective tissue concentrations in pmol hydroxymethyldeoxynucleoside/mg DNA were 170 +/- 14 and 113 +/- 11. The lower quantifiable limits were about 97 and 88 pmol/mg DNA, respectively. Diffusive exposure of HNEC to air FA up to 100 ppm (v/v) for 24 h did not produce quantifiable hydroxymethylnucleosides. FA-modified deoxynucleosides may be useful biomarkers for FA exposure in biological monitoring samples taken by nasal lavage or brush biopsy.


Subject(s)
DNA Adducts/analysis , Fixatives/metabolism , Formaldehyde/metabolism , Mutagens/metabolism , Nasal Mucosa/metabolism , Animals , Biomarkers , Cell Survival , Cells, Cultured , Chromatography, High Pressure Liquid/methods , Environmental Exposure , Fixatives/pharmacology , Formaldehyde/pharmacology , Humans , Male , Nasal Mucosa/cytology , Nasal Mucosa/drug effects , Nose Neoplasms/chemically induced , Nose Neoplasms/genetics , Rats
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