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1.
Article in Russian | MEDLINE | ID: mdl-30695486

ABSTRACT

AIM: Retrospective analysis of biological and molecular-genetic properties of strains - cau- sative agents of cholera - isolated in the period of epidemics in Ukraine in 1994 - 2011. MATERIALS AND METHODS: Phenotypic and molecular-genetic properties of 5 strains of cholera vibrios, biovar El Tor isolated from cholera patients and 4 strains from the environmental samples were studied using traditional bacteriological and genetic methods. Detection of DNA for toxigenicity genes and genes characteristic for El Tor and classic biovar were carried out by PCR method using rea- gent kits <> and <> an experimental test system). Sequencing of genomes of 4 strains of causative agents of cholera was carried out in genetic analyzer Ion Torrent Personal Genome Machine. RESULTS: Strains of cholera vibrios identified in Ukraine in 1994 and 2011 such as a typical toxigenic biovar El Tor (V cholerae Ο1, El Tor, Ogawa, Hly-, ctxA+, tcpA+) contain genes ofthe classic cholera vibrio in their genome and are genetically altered (hybrid) variants of cholera vibrio biovar El Tor producing enterotoxin CTI and having increased virulence, that was clinically manifested in predominance of severe forms of cholera in Mariupol of Donetsk region in 2011. Genome sequences ofthe 4 studied strains were deposited into the international database DDBJ/EMBL/GenBank. CONCLUSION: The studied isolates were established to belong to a clade of strains associated with cholera outbreaks in Haiti and Asian continent, from where genetically altered strains of cholera vibrios biovar El Tor were introduced to Haiti in 2010, based on results of comparison of genomic sequences of the studied strains with genomes of V cholera strains from the international database GenBank.


Subject(s)
Cholera/genetics , DNA, Bacterial/genetics , Databases, Nucleic Acid , Genes, Bacterial , Sequence Analysis, DNA , Vibrio cholerae , Cholera/epidemiology , Humans , Prohibitins , Ukraine/epidemiology , Vibrio cholerae/genetics , Vibrio cholerae/isolation & purification
2.
Article in Russian | MEDLINE | ID: mdl-27228673

ABSTRACT

AIM: Analysis of epidemic manifestations of natural-foci infections (NFI), clarification of spectrum of their causative agents, determination of epizootic activity of natural foci in the Crimea Federal District (KFD). MATERIALS AND METHODS: Epizootologic examination of 10 administrative districts of KDF was carried out. 291 pools (2705 specimens) of ixodes ticks and 283 samples of organs of small mammals were studied by PCRmethod for the presence of DNA/RNA of causative agents of a number of NFI. RESULTS: Morbidity by NFI in KFD was registered by 6 nosologies: Lyme borreliosis, Marseilles fever, leptospirosis; tularemia, intestine yersiniosis and tick-borne viral encephalitis, wherein, transmissive infections made up 91.6%. Circulation of causative agents of Crimea hemorrhagic fever, Q fever, group of tick-borne spotted fever, Lyme borreliosis, human granulocytic anaplasmosis, human monocytic ehrlichiosis, hemorrhagic fever with renal syndrome, West Nile fever, tularemia and leptospirosis was established. CONCLUSION: Due to activity of natural foci of NFI further monitoring of epidemiologic and epizootologic manifestations of these infections in the Crimea, including using genetic methods of analysis, is necessary for ensuring sanitary-epidemiologic welfare of KFD population.


Subject(s)
Focal Infection/epidemiology , Lyme Disease/epidemiology , Tick-Borne Diseases/epidemiology , Viruses/isolation & purification , West Nile Fever/epidemiology , Animals , DNA, Viral/genetics , DNA, Viral/isolation & purification , Disease Reservoirs , Focal Infection/genetics , Focal Infection/virology , Humans , Ixodes/pathogenicity , Ixodes/virology , Lyme Disease/genetics , Lyme Disease/virology , Mammals/virology , Russia , Tick-Borne Diseases/genetics , Tick-Borne Diseases/virology , Viruses/genetics , Viruses/pathogenicity , West Nile Fever/genetics
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