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1.
JCI Insight ; 4(21)2019 11 01.
Article in English | MEDLINE | ID: mdl-31672938

ABSTRACT

X-linked reticulate pigmentary disorder (XLPDR, Mendelian Inheritance in Man #301220) is a rare syndrome characterized by recurrent infections and sterile multiorgan inflammation. The syndrome is caused by an intronic mutation in POLA1, the gene encoding the catalytic subunit of DNA polymerase-α (Pol-α), which is responsible for Okazaki fragment synthesis during DNA replication. Reduced POLA1 expression in this condition triggers spontaneous type I interferon expression, which can be linked to the autoinflammatory manifestations of the disease. However, the history of recurrent infections in this syndrome is as yet unexplained. Here we report that patients with XLPDR have reduced NK cell cytotoxic activity and decreased numbers of NK cells, particularly differentiated, stage V, cells (CD3-CD56dim). This phenotype is reminiscent of hypomorphic mutations in MCM4, which encodes a component of the minichromosome maintenance (MCM) helicase complex that is functionally linked to Pol-α during the DNA replication process. We find that POLA1 deficiency leads to MCM4 depletion and that both can impair NK cell natural cytotoxicity and show that this is due to a defect in lytic granule polarization. Altogether, our study provides mechanistic connections between Pol-α and the MCM complex and demonstrates their relevance in NK cell function.


Subject(s)
Amyloidosis, Familial/immunology , Genetic Diseases, X-Linked/immunology , Killer Cells, Natural/immunology , Pigmentation Disorders/immunology , Skin Diseases, Genetic/immunology , Amyloidosis, Familial/genetics , Cytotoxicity, Immunologic , DNA Repair , Genetic Diseases, X-Linked/genetics , Humans , K562 Cells , Minichromosome Maintenance Complex Component 4/genetics , Pigmentation Disorders/genetics , Recombination, Genetic , Skin Diseases, Genetic/genetics
2.
Am J Med Genet B Neuropsychiatr Genet ; 180(7): 471-482, 2019 10.
Article in English | MEDLINE | ID: mdl-31161682

ABSTRACT

We describe a unique male with a dicentric Y chromosome whose phenotype was compared to that of males with 47,XYY (XYY). The male Y-chromosome aneuploidy XYY is associated with physical, behavioral/cognitive phenotypes, and autism spectrum disorders. We hypothesize that increased risk for these phenotypes is caused by increased copy number/overexpression of Y-encoded genes. Specifically, an extra copy of the neuroligin gene NLGN4Y might elevate the risk of autism in boys with XYY. We present a unique male with the karyotype 46,X,idic(Y)(q11.22), which includes duplication of the Y short arm and proximal long arm and deletion of the distal long arm, evaluated his physical, behavioral/cognitive, and neuroimaging/magnetoencephalography (MEG) phenotypes, and measured blood RNA expression of Y genes. The proband had tall stature and cognitive function within the typical range, without autism features. His blood RNA showed twofold increase in expression of Yp genes versus XY controls, and absent expression of deleted Yq genes, including NLGN4Y. The M100 latencies were similar to findings in typically developing males. In summary, the proband had overexpression of a subset of Yp genes, absent NLGN4Y expression, without ASD findings or XYY-MEG latency findings. These results are consistent with a role for NLGN4Y overexpression in the etiology of behavioral phenotypes associated with XYY. Further investigation of NLGN4Y as an ASD risk gene in XYY is warranted. The genotype and phenotype(s) of this subject may also provide insight into how Y chromosome genes contribute to normal male development and the male predominance in ASD.


Subject(s)
Cell Adhesion Molecules, Neuronal/genetics , Chromosomes, Human, Y/genetics , XYY Karyotype/physiopathology , Adolescent , Autism Spectrum Disorder/genetics , Autism Spectrum Disorder/physiopathology , Autistic Disorder/genetics , Autistic Disorder/physiopathology , Cell Adhesion Molecules, Neuronal/metabolism , Child , Chromosome Aberrations , DNA Copy Number Variations/genetics , Gene Dosage/genetics , Genes, Y-Linked/genetics , Humans , Karyotyping , Male , Neuropsychological Tests , Phenotype , XYY Karyotype/genetics
3.
Proc Natl Acad Sci U S A ; 115(28): 7398-7403, 2018 07 10.
Article in English | MEDLINE | ID: mdl-29946024

ABSTRACT

A fundamental question in the biology of sex differences has eluded direct study in humans: How does sex-chromosome dosage (SCD) shape genome function? To address this, we developed a systematic map of SCD effects on gene function by analyzing genome-wide expression data in humans with diverse sex-chromosome aneuploidies (XO, XXX, XXY, XYY, and XXYY). For sex chromosomes, we demonstrate a pattern of obligate dosage sensitivity among evolutionarily preserved X-Y homologs and update prevailing theoretical models for SCD compensation by detecting X-linked genes that increase expression with decreasing X- and/or Y-chromosome dosage. We further show that SCD-sensitive sex-chromosome genes regulate specific coexpression networks of SCD-sensitive autosomal genes with critical cellular functions and a demonstrable potential to mediate previously documented SCD effects on disease. These gene coexpression results converge with analysis of transcription factor binding site enrichment and measures of gene expression in murine knockout models to spotlight the dosage-sensitive X-linked transcription factor ZFX as a key mediator of SCD effects on wider genome expression. Our findings characterize the effects of SCD broadly across the genome, with potential implications for human phenotypic variation.


Subject(s)
Aneuploidy , Chromosomes, Human, X , Chromosomes, Human, Y , Gene Dosage , Gene Expression Regulation , Kruppel-Like Transcription Factors , Models, Genetic , Animals , Chromosomes, Human, X/genetics , Chromosomes, Human, X/metabolism , Chromosomes, Human, Y/genetics , Chromosomes, Human, Y/metabolism , Female , Genome-Wide Association Study , Humans , Kruppel-Like Transcription Factors/genetics , Kruppel-Like Transcription Factors/metabolism , Male , Mice , Mice, Knockout
4.
J Hum Genet ; 62(2): 229-234, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27604558

ABSTRACT

Short stature homeobox gene (SHOX) is located in the pseudoautosomal region 1 of the sex chromosomes. It encodes a transcription factor implicated in the skeletal growth. Point mutations, deletions or duplications of SHOX or its transcriptional regulatory elements are associated with two skeletal dysplasias, Léri-Weill dyschondrosteosis (LWD) and Langer mesomelic dysplasia (LMD), as well as in a small proportion of idiopathic short stature (ISS) individuals. We have identified a total of 15 partial SHOX deletions and 13 partial SHOX duplications in LWD, LMD and ISS patients referred for routine SHOX diagnostics during a 10 year period (2004-2014). Subsequently, we characterized these alterations using MLPA (multiplex ligation-dependent probe amplification assay), fine-tiling array CGH (comparative genomic hybridation) and breakpoint PCR. Nearly half of the alterations have a distal or proximal breakpoint in intron 3. Evaluation of our data and that in the literature reveals that although partial deletions and duplications only account for a small fraction of SHOX alterations, intron 3 appears to be a breakpoint hotspot, with alterations arising by non-allelic homologous recombination, non-homologous end joining or other complex mechanisms.


Subject(s)
Gene Duplication/genetics , Growth Disorders/genetics , Homeodomain Proteins/genetics , Osteochondrodysplasias/genetics , Sequence Deletion/genetics , Base Sequence , Comparative Genomic Hybridization , Humans , Introns/genetics , Multiplex Polymerase Chain Reaction , Nucleic Acid Amplification Techniques , Sequence Analysis, DNA , Short Stature Homeobox Protein
5.
Nat Immunol ; 17(5): 495-504, 2016 May.
Article in English | MEDLINE | ID: mdl-27019227

ABSTRACT

Aberrant nucleic acids generated during viral replication are the main trigger for antiviral immunity, and mutations that disrupt nucleic acid metabolism can lead to autoinflammatory disorders. Here we investigated the etiology of X-linked reticulate pigmentary disorder (XLPDR), a primary immunodeficiency with autoinflammatory features. We discovered that XLPDR is caused by an intronic mutation that disrupts the expression of POLA1, which encodes the catalytic subunit of DNA polymerase-α. Unexpectedly, POLA1 deficiency resulted in increased production of type I interferons. This enzyme is necessary for the synthesis of RNA:DNA primers during DNA replication and, strikingly, we found that POLA1 is also required for the synthesis of cytosolic RNA:DNA, which directly modulates interferon activation. Together this work identifies POLA1 as a critical regulator of the type I interferon response.


Subject(s)
DNA Polymerase I/metabolism , DNA/biosynthesis , Interferon Type I/metabolism , RNA/biosynthesis , Base Sequence , Cells, Cultured , Cytosol/metabolism , DNA/genetics , DNA Polymerase I/genetics , Family Health , Female , Fibroblasts/cytology , Fibroblasts/metabolism , Gene Expression Profiling , Genetic Diseases, X-Linked/genetics , Genetic Diseases, X-Linked/metabolism , HEK293 Cells , HeLa Cells , Humans , Immunoblotting , Male , Microscopy, Confocal , Mutation , Oligonucleotide Array Sequence Analysis , Pedigree , Pigmentation Disorders/genetics , Pigmentation Disorders/metabolism , RNA/genetics , Reverse Transcriptase Polymerase Chain Reaction
6.
Endocrinology ; 156(4): 1408-15, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25607894

ABSTRACT

Single-minded 1 (Sim1) is a basic helix-loop-helix Per-Arnt-Sim transcription factor that is important for neuronal development in the hypothalamus. Loss-of-function mutation of Sim1 causes early-onset obesity. However, it is unknown whether and how Sim1 regulates bone remodeling. In this study, we found that adult-onset Sim1 deletion increases bone formation, leading to high bone mass. In contrast, Sim1-overexpressing transgenic mice exhibit decreased bone formation and low bone mass. Sim1 does not directly regulate osteoblastogenesis, because bone marrow mesenchymal stem cells from Sim1 mutant mice display a normal capacity for osteoblast differentiation. Instead, Sim1 inhibits bone formation via stimulating the sympathetic nervous system, because sympathetic tone is decreased by Sim1 deletion but increased by Sim1 overexpression. Treatment with the ß-adrenergic agonist isoproterenol effectively reverses the high bone mass in Sim1-knockout mice. These findings reveal Sim1 as a critical yet previously unrecognized modulator of skeletal homeostasis that functions through a central relay.


Subject(s)
Basic Helix-Loop-Helix Transcription Factors/metabolism , Homeostasis/physiology , Hypothalamus/metabolism , Osteogenesis/physiology , Repressor Proteins/metabolism , Sympathetic Nervous System/metabolism , Animals , Basic Helix-Loop-Helix Transcription Factors/genetics , Male , Mice , Mice, Transgenic , Neurons/metabolism , Repressor Proteins/genetics
7.
Endocrinology ; 155(7): 2436-44, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24773343

ABSTRACT

Germline haploinsufficiency of human or mouse Sim1 is associated with hyperphagic obesity. Sim1 encodes a transcription factor required for proper formation of the paraventricular (PVN), supraoptic, and anterior periventricular hypothalamic nuclei. Sim1 expression persists in these neurons in adult mice, raising the question of whether it plays a physiologic role in regulation of energy balance. We previously showed that Sim1 heterozygous mice had normal numbers of PVN neurons that were hyporesponsive to melanocortin 4 receptor agonism and showed reduced oxytocin expression. Furthermore, conditional postnatal neuronal inactivation of Sim1 also caused hyperphagic obesity and decreased hypothalamic oxytocin expression. PVN projections to the hindbrain, where oxytocin is thought to act to modulate satiety, were anatomically intact in both Sim1 heterozygous and conditional knockout mice. These experiments provided evidence that Sim1 functions in energy balance apart from its role in hypothalamic development but did not rule out effects of Sim1 deficiency on postnatal hypothalamic maturation. To address this possibility, we used a tamoxifen-inducible, neural-specific Cre transgene to conditionally inactivate Sim1 in adult mice with mature hypothalamic circuitry. Induced Sim1 inactivation caused increased food and water intake and decreased expression of PVN neuropeptides, especially oxytocin and vasopressin, with no change in energy expenditure. Sim1 expression was not required for survival of PVN neurons. The results corroborate previous evidence that Sim1 acts physiologically as well as developmentally to regulate body weight. Inducible knockout mice provide a system for studying Sim1's physiologic function in energy balance and identifying its relevant transcriptional targets in the hypothalamus.


Subject(s)
Basic Helix-Loop-Helix Transcription Factors/metabolism , Hyperphagia/metabolism , Neurons/metabolism , Obesity/metabolism , Repressor Proteins/metabolism , Animals , Basic Helix-Loop-Helix Transcription Factors/genetics , Body Weight/drug effects , Bone Density Conservation Agents/pharmacology , Eating/drug effects , Energy Metabolism/drug effects , Female , Homeostasis/drug effects , Male , Mice , Mice, 129 Strain , Mice, Inbred C57BL , Mice, Knockout , Mice, Transgenic , Neuropeptides/metabolism , Oxytocin/metabolism , Paraventricular Hypothalamic Nucleus/metabolism , Repressor Proteins/genetics , Tamoxifen/pharmacology
8.
Obesity (Silver Spring) ; 22 Suppl 1: S1-S17, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24574081

ABSTRACT

OBJECTIVE: Hyperphagia is a central feature of inherited disorders (e.g., Prader-Willi Syndrome) in which obesity is a primary phenotypic component. Hyperphagia may also contribute to obesity as observed in the general population, thus raising the potential importance of common underlying mechanisms and treatments. Substantial gaps in understanding the molecular basis of inherited hyperphagia syndromes are present as are a lack of mechanistic of mechanistic targets that can serve as a basis for pharmacologic and behavioral treatments. DESIGN AND METHODS: International conference with 28 experts, including scientists and caregivers, providing presentations, panel discussions, and debates. RESULTS: The reviewed collective research and clinical experience provides a critical body of new and novel information on hyperphagia at levels ranging from molecular to population. Gaps in understanding and tools needed for additional research were identified. CONCLUSIONS: This report documents the full scope of important topics reviewed at a comprehensive international meeting devoted to the topic of hyperphagia and identifies key areas for future funding and research.


Subject(s)
Craniopharyngioma/diagnosis , Hyperphagia/diagnosis , Obesity/prevention & control , Prader-Willi Syndrome/diagnosis , Research , Basic Helix-Loop-Helix Transcription Factors/metabolism , Behavior, Addictive , Craniopharyngioma/complications , Craniopharyngioma/therapy , Eating , Feeding Behavior , Female , Humans , Hyperphagia/etiology , Hyperphagia/therapy , Male , Models, Animal , Obesity/complications , Odds Ratio , Phenotype , Prader-Willi Syndrome/complications , Prader-Willi Syndrome/therapy , Repressor Proteins/metabolism , Satiety Response
9.
Am J Med Genet A ; 161A(10): 2487-94, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23918653

ABSTRACT

The NR5A1 gene encodes for steroidogenic factor 1, a nuclear receptor that regulates proper adrenal and gonadal development and function. Mutations identified by NR5A1 sequencing have been associated with disorders of sex development (DSD), ranging from sex reversal to severe hypospadias in 46,XY patients and premature ovarian failure (POF) in 46,XX patients. Previous reports have identified four families with a history of both 46,XY DSD and 46,XX POF carrying segregating NR5A1 sequence mutations. Recently, three 46,XY DSD sporadic cases with NR5A1 microdeletions have been reported. Here, we identify the first NR5A1 microdeletion transmitted in a pedigree with both 46,XY DSD and 46,XX POF. A 46,XY individual with DSD due to gonadal dysgenesis was born to a young mother who developed POF. Array CGH analysis revealed a maternally inherited 0.23 Mb microdeletion of chromosome 9q33.3, including the NR5A1 gene. Based on this finding, we screened patients with unexplained 46,XY DSD (n = 11), proximal hypospadias (n = 21) and 46,XX POF (n = 36) for possible NR5A1 copy-number variations (CNVs) via multiplex ligation-dependent probe amplification (MLPA), but did not identify any additional CNVs involving NR5A1. These data suggest that NR5A1 CNVs are an infrequent cause of these disorders but that array CGH and MLPA are useful genomic screening tools to uncover the genetic basis of such unexplained cases. This case is the first report of a familial NR5A1 CNV transmitting in a pedigree, causing both the male and female phenotypes associated with NR5A1 mutations, and the first report of a NR5A1 CNV associated with POF.


Subject(s)
DNA Copy Number Variations , Disorder of Sex Development, 46,XY/diagnosis , Disorder of Sex Development, 46,XY/genetics , Primary Ovarian Insufficiency/diagnosis , Primary Ovarian Insufficiency/genetics , Steroidogenic Factor 1/genetics , Adult , Base Sequence , Chromosome Breakpoints , Chromosome Deletion , Chromosomes, Human, Pair 9 , Female , Humans , Infant, Newborn , Male , Molecular Sequence Data , Mutation , Pedigree , Phenotype
10.
Pediatrics ; 129(4): 769-78, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22412026

ABSTRACT

OBJECTIVE: To contrast the behavioral and social phenotypes including a screen for autistic behaviors in boys with 47,XYY syndrome (XYY) or 47,XXY Klinefelter syndrome (KS) and controls and investigate the effect of prenatal diagnosis on the phenotype. METHODS: Patients included 26 boys with 47,XYY, 82 boys with KS, and 50 control boys (ages 4-15 years). Participants and parents completed a physical examination, behavioral questionnaires, and intellectual assessments. RESULTS: Most boys with XYY or KS had Child Behavior Checklist parental ratings within the normal range. On the Child Behavior Checklist, mean problem behaviors t scores were higher in the XYY versus KS groups for the Problem Behavior, Externalizing, Withdrawn, Thought Problems, and Attention Problems subscales. On the Conners' Parent Rating Scale-Revised, the XYY versus KS group had increased frequency of hyperactive/impulsive symptoms (P < .006). In addition, 50% and 12% of the XYY and KS groups, respectively, had scores >15 for autism screening from the Social Communication Questionnaire. For the boys with KS, prenatal diagnosis was associated with fewer problem behaviors. CONCLUSIONS: A subset of the XYY and KS groups had behavioral difficulties that were more severe in the XYY group. These findings could guide clinical practice and inform patients and parents. Boys diagnosed with XYY or KS should receive a comprehensive psychoeducational evaluation and be screened for learning disabilities, attention-deficit/hyperactivity disorder, and autism spectrum disorders.


Subject(s)
Adolescent Behavior , Attention Deficit Disorder with Hyperactivity/genetics , Child Behavior , Child Development Disorders, Pervasive/genetics , Genetic Testing/methods , Klinefelter Syndrome/genetics , XYY Karyotype/genetics , Adolescent , Attention Deficit Disorder with Hyperactivity/diagnosis , Child , Child Development Disorders, Pervasive/diagnosis , Child, Preschool , Humans , Karyotyping , Klinefelter Syndrome/diagnosis , Male , Neuropsychological Tests , Phenotype , XYY Karyotype/diagnosis
11.
Pediatr Cardiol ; 33(5): 757-63, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22349727

ABSTRACT

Hypoplastic left heart syndrome (HLHS), one of the most severe types of congenital heart disease (CHD), results in significant morbidity and mortality despite surgical palliation. The etiology of HLHS is unknown, but evidence supports genetic contributors. The authors hypothesized that submicroscopic chromosomal abnormalities exist in individuals with HLHS and are more frequent in those with additional birth defects. This study sought to determine the incidence and genomic location of submicroscopic chromosomal abnormalities in HLHS and potentially to identify novel genetic loci that may contribute to the disease. For this study, 43 children with HLHS were recruited and screened together with a control population of 16 subjects using array comparative genomic hybridization, also called chromosomal microarray, for chromosomal copy number variations (CNVs). A statistically greater number of CNVs were found in the HLHS group than in the control group (p < 0.03). The CNVs were predominantly small autosomal deletions and duplications (≤ 60,000 bp). The frequency of unique CNVs, those not previously reported in public databases, did not differ statistically between the HLHS subjects and the control subjects. No difference in the frequency of CNVs was noted between the patients with HLHS and additional anomalies and those with isolated HLHS. The identified CNVs did not harbor potential candidate genes for HLHS, but one microdeletion was located on chromosome 14q23, a genetic locus linked to left-sided CHD. The study data demonstrate that CNVs, specifically those relatively small in size, are more common in subjects with HLHS, but the frequency of large potentially disease-causing CNVs (>480,000 bp) did not differ between the HLHS and control populations.


Subject(s)
DNA Copy Number Variations , Hypoplastic Left Heart Syndrome/genetics , Case-Control Studies , Child , Child, Preschool , Chromosome Aberrations , Comparative Genomic Hybridization , Echocardiography , Female , Humans , Hypoplastic Left Heart Syndrome/diagnostic imaging , Infant , Karyotype , Male
12.
Eur J Hum Genet ; 19(5): 540-6, 2011 May.
Article in English | MEDLINE | ID: mdl-21368915

ABSTRACT

We studied a man with distal hypospadias, partial anomalous pulmonary venous return, mild limb-length inequality and a balanced translocation involving chromosomes 9 and 13. To gain insight into the etiology of his birth defects, we mapped the translocation breakpoints by high-resolution comparative genomic hybridization (CGH), using chromosome 9- and 13-specific tiling arrays to analyze genetic material from a spontaneously aborted fetus with unbalanced segregation of the translocation. The chromosome 13 breakpoint was ∼400 kb away from the nearest gene, but the chromosome 9 breakpoint fell within an intron of Basonuclin 2 (BNC2), a gene that encodes an evolutionarily conserved nuclear zinc-finger protein. The BNC2/Bnc2 gene is abundantly expressed in developing mouse and human periurethral tissues. In all, 6 of 48 unrelated subjects with distal hypospadias had nine novel nonsynonymous substitutions in BNC2, five of which were computationally predicted to be deleterious. In comparison, two of 23 controls with normal penile urethra morphology, each had a novel nonsynonymous substitution in BNC2, one of which was predicted to be deleterious. Bnc2(-/-) mice of both sexes displayed a high frequency of distal urethral defects; heterozygotes showed similar defects with reduced penetrance. The association of BNC2 disruption with distal urethral defects and the gene's expression pattern indicate that it functions in urethral development.


Subject(s)
Hypospadias/genetics , Translocation, Genetic , Adult , Animals , Comparative Genomic Hybridization , Female , Gene Silencing , Humans , Hypospadias/pathology , Male , Mice , Urethra/abnormalities , Urethra/pathology
13.
Am J Med Sci ; 340(6): 481-91, 2010 Dec.
Article in English | MEDLINE | ID: mdl-21119332

ABSTRACT

Diet and sedentary lifestyle, interacting with "thrifty" genes, are widely accepted as the principal cause of the current global obesity epidemic. However, a number of alternative etiologies for obesity have been proposed, including "drifty" genes, viruses, bacteria, environmental toxins, social network effects, maternal imprinting, sleep deprivation, and others. These Grand Rounds reviews the background of some of these unconventional ideas and evidence for or against their roles in the obesity epidemic.


Subject(s)
Epidemics , Obesity/epidemiology , Adenoviruses, Human , Animals , Bacterial Infections/complications , Distemper/complications , Distemper Virus, Canine , Helicobacter Infections/complications , Helicobacter pylori , Humans , Mendelian Randomization Analysis , Obesity/etiology , Obesity/genetics , Prebiotics , Starvation , Stress, Psychological/complications , Weight Loss
14.
J Neurosci ; 30(44): 14630-4, 2010 Nov 03.
Article in English | MEDLINE | ID: mdl-21048120

ABSTRACT

D-Fenfluramine (D-Fen) increases serotonin (5-HT) content in the synaptic cleft and exerts anorexigenic effects in animals and humans. However, the neural circuits that mediate these effects are not fully identified. To address this issue, we assessed the efficacy of D-Fen-induced hypophagia in mouse models with manipulations of several genes in selective populations of neurons. Expectedly, we found that global deletion of 5-HT 2C receptors (5-HT(2C)Rs) significantly attenuated D-Fen-induced anorexia. These anorexigenic effects were restored in mice with 5-HT(2C)Rs expressed only in pro-opiomelanocortin (POMC) neurons. Further, we found that deletion of melanocortin 4 receptors (MC4Rs), a downstream target of POMC neurons, abolished anorexigenic effects of D-Fen. Reexpression of MC4Rs only in SIM1 neurons in the hypothalamic paraventricular nucleus and neurons in the amygdala was sufficient to restore the hypophagic property of D-Fen. Thus, our results identify a neurochemically defined neural circuit through which D-Fen influences appetite and thereby indicate that this 5-HT(2C)R/POMC-MC4R/SIM1 circuit may yield a more refined target to exploit for weight loss.


Subject(s)
Anorexia/metabolism , Anorexia/physiopathology , Fenfluramine/pharmacology , Melanocortins/physiology , Serotonin/physiology , Animals , Anorexia/chemically induced , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Neural Pathways/cytology , Neural Pathways/drug effects , Neural Pathways/metabolism , Pro-Opiomelanocortin/physiology , Receptor, Melanocortin, Type 4/deficiency , Receptor, Melanocortin, Type 4/genetics , Receptor, Serotonin, 5-HT2C/deficiency , Receptor, Serotonin, 5-HT2C/genetics , Serotonin/metabolism , Selective Serotonin Reuptake Inhibitors/pharmacology , Weight Loss/genetics , Weight Loss/physiology
15.
Am J Med Genet A ; 152A(12): 3084-90, 2010 Dec.
Article in English | MEDLINE | ID: mdl-21108393

ABSTRACT

We describe three patients with a comparable deletion encompassing SLC25A43, SLC25A5, CXorf56, UBE2A, NKRF, and two non-coding RNA genes, U1 and LOC100303728. Moderate to severe intellectual disability (ID), psychomotor retardation, severely impaired/absent speech, seizures, and urogenital anomalies were present in all three patients. Facial dysmorphisms include ocular hypertelorism, synophrys, and a depressed nasal bridge. These clinical features overlap with those described in two patients from a family with a similar deletion at Xq24 that also includes UBE2A, and in several patients of Brazilian and Polish families with point mutations in UBE2A. Notably, all five patients with an Xq24 deletion have ventricular septal defects that are not present in patients with a point mutation, which might be attributed to the deletion of SLC25A5. Taken together, the UBE2A deficiency syndrome in male patients with a mutation in or a deletion of UBE2A is characterized by ID, absent speech, seizures, urogenital anomalies, frequently including a small penis, and skin abnormalities, which include generalized hirsutism, low posterior hairline, myxedematous appearance, widely spaced nipples, and hair whorls. Facial dysmorphisms include a wide face, a depressed nasal bridge, a large mouth with downturned corners, thin vermilion, and a short, broad neck.


Subject(s)
Intellectual Disability/genetics , Seizures/genetics , Ubiquitin-Conjugating Enzymes/genetics , Urogenital Abnormalities/genetics , Abnormalities, Multiple/genetics , Child , Child, Preschool , Chromosomes, Human, X/genetics , Humans , Infant , Male , Pedigree , Point Mutation , Skin Abnormalities/genetics , Speech Disorders/genetics , Syndrome , Ubiquitin-Conjugating Enzymes/deficiency
16.
J Neurosci ; 30(10): 3803-12, 2010 Mar 10.
Article in English | MEDLINE | ID: mdl-20220015

ABSTRACT

Single-minded 1 (SIM1) mutations are one of the few known causes of nonsyndromic monogenic obesity in both humans and mice. Although the role of Sim1 in the formation of the hypothalamus has been described, its postdevelopmental, physiological functions have not been well established. Here we demonstrate that postnatal CNS deficiency of Sim1 is sufficient to cause hyperphagic obesity. We conditionally deleted Sim1 after birth using CaMKII-Cre (alpha-calcium/calmodulin-dependent protein kinase II-Cre) lines to recombine a floxed Sim1 allele. Conditional Sim1 heterozygotes phenocopied germ line Sim1 heterozygotes, displaying hyperphagic obesity and increased length. We also generated viable conditional Sim1 homozygotes, demonstrating that adult Sim1 expression is not essential for mouse or neuron survival and revealing a dosage-dependent effect of Sim1 on obesity. Using stereological cell counting, we showed that the phenotype of both germ line heterozygotes and conditional Sim1 homozygotes was not attributable to global hypocellularity of the paraventricular nucleus (PVN) of the hypothalamus. We also used retrograde tract tracing to demonstrate that the PVN of germ line heterozygous mice projects normally to the dorsal vagal complex and the median eminence. Finally, we showed that conditional Sim1 homozygotes and germ line Sim1 heterozygotes exhibit a remarkable decrease in hypothalamic oxytocin (Oxt) and PVN melanocortin 4 receptor (Mc4r) mRNA. These results demonstrate that the role of Sim1 in feeding regulation is not limited to formation of the PVN or its projections and that the hyperphagic obesity in Sim1-deficient mice may be attributable to changes in the leptin-melanocortin-oxytocin pathway.


Subject(s)
Basic Helix-Loop-Helix Transcription Factors/deficiency , Gene Expression Regulation, Developmental , Hyperphagia/genetics , Obesity/genetics , Oxytocin/antagonists & inhibitors , Receptor, Melanocortin, Type 4/antagonists & inhibitors , Repressor Proteins/deficiency , Animals , Animals, Newborn , Basic Helix-Loop-Helix Transcription Factors/genetics , Eating/genetics , Female , Gene Silencing , Hyperphagia/metabolism , Hyperphagia/pathology , Hyperphagia/physiopathology , Hypothalamus/metabolism , Hypothalamus/pathology , Hypothalamus/physiopathology , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Mice, Transgenic , Obesity/metabolism , Obesity/pathology , Obesity/physiopathology , Oxytocin/biosynthesis , Oxytocin/genetics , Paraventricular Hypothalamic Nucleus/metabolism , Paraventricular Hypothalamic Nucleus/pathology , Paraventricular Hypothalamic Nucleus/physiopathology , RNA, Messenger/antagonists & inhibitors , RNA, Messenger/biosynthesis , Receptor, Melanocortin, Type 4/biosynthesis , Receptor, Melanocortin, Type 4/genetics , Repressor Proteins/genetics , Reproducibility of Results , Signal Transduction/genetics
17.
Dev Disabil Res Rev ; 15(4): 309-17, 2009.
Article in English | MEDLINE | ID: mdl-20014371

ABSTRACT

OBJECTIVE: The goal of this study was to contrast the cognitive phenotypes in boys with 47,XYY (XYY) karyotype and boys with 47,XXY karyotype [Klinefelter syndrome, (KS)], who share an extra copy of the X-Y pseudoautosomal region but differ in their dosage of strictly sex-linked genes. METHODS: Neuropsychological evaluation of general cognitive ability, language, memory, attention, visual-spatial abilities, visual-motor skills, and motor function. RESULTS: Study cohort: 21 boys with 47,XYY and 93 boys with 47,XXY (KS), age 4-17 years, and 36 age-matched control boys. Both the XYY and KS groups performed less well, on average, than the controls on tests of general cognitive ability, achievement, language, verbal memory, some aspects of attention, and executive function, and motor function. The boys with XYY on average had more severe and pervasive language impairment, at both simple and complex levels, and the boys with KS on average had greater motor impairment in gross motor function and coordination, especially in running speed and agility. CONCLUSIONS: The results from these large XYY and KS cohorts have important neurocognitive and educational implications. From the neurocognitive standpoint, the presenting findings afford an opportunity to gain insights into brain development in boys with XYY and those with KS. From the educational standpoint, it is critical that boys with XYY or KS receive appropriate educational interventions that target their specific learning challenges. These findings also provide important information for counseling clinicians and families about these disorders.


Subject(s)
Chromosomes, Human, X/genetics , Chromosomes, Human, Y/genetics , Cognition Disorders/epidemiology , Klinefelter Syndrome/epidemiology , Klinefelter Syndrome/genetics , Motor Skills Disorders/epidemiology , Phenotype , Achievement , Adolescent , Child , Child, Preschool , Cognition Disorders/diagnosis , Humans , Karyotyping , Klinefelter Syndrome/blood , Male , Motor Skills Disorders/diagnosis , Neuropsychological Tests , Testosterone/blood , Testosterone/genetics
18.
J Clin Endocrinol Metab ; 94(12): 5028-33, 2009 Dec.
Article in English | MEDLINE | ID: mdl-19850687

ABSTRACT

BACKGROUND: Homozygous mutation of the short stature homeobox-containing gene, SHOX, results in Langer mesomelic dysplasia (LMD). Our case presented with severe short stature and skeletal deformities with Turner syndrome (TS) and a SHOX gene abnormality due to a downstream allele deletion in her normal X chromosome. Medical literature review did not reveal similar cases that were treated with GH therapy. METHOD: We present an 11-yr-old with combined TS and LMD with severe short stature and skeletal deformities. She was studied for the effect of GH therapy on stature and skeletal deformities. Karyotype testing showed 45,X/46,X,idic(X). Genetic analysis of SHOX gene testing did not detect any exonic mutations. Interestingly, both alleles of the flanking marker DXYS233, a marker downstream of the 3' end of SHOX coding sequence, were absent with resultant LMD. GH therapy in the mean dose of 0.321 mg/kg/wk was administered for 4 yr (0.287, 0.355, 0.317, and 0.327 mg/kg/week in the first, second, third, and fourth years, respectively). Clinical data were reviewed. RESULT: The growth rates of 3.46, 3.87, 2.3, and 0.7 cm/yr were observed in the first, second, third, and fourth years of the GH therapy, respectively. There was no clinical deterioration of the skeletal deformities. CONCLUSION: There was a failure to achieve growth improvements with GH therapy for 4 years, but there was no worsening of the skeletal deformities. We conclude that GH therapy may not be beneficial in severe short stature due to combined TS and LMD resulting from homozygous SHOX deficiency.


Subject(s)
Body Height/drug effects , Bone and Bones/abnormalities , Human Growth Hormone/therapeutic use , Langer-Giedion Syndrome/complications , Langer-Giedion Syndrome/drug therapy , Turner Syndrome/complications , Turner Syndrome/drug therapy , Child , Cytogenetic Analysis , Female , Genetic Markers , Growth/drug effects , Growth/physiology , Homeodomain Proteins/genetics , Humans , Langer-Giedion Syndrome/pathology , Recombinant Proteins/therapeutic use , Short Stature Homeobox Protein , Turner Syndrome/pathology
19.
BMC Bioinformatics ; 10: 261, 2009 Aug 23.
Article in English | MEDLINE | ID: mdl-19698182

ABSTRACT

BACKGROUND: Statistical power calculations are a critical part of any study design for gene mapping. Most calculations assume that the locus of interest is biallelic. However, there are common situations in human genetics such as X-linked loci in males where the locus is haploid. The purpose of this work is to mathematically derive the biometric model for haploid loci, and to compute power for QTL mapping when the loci are haploid. RESULTS: We have derived the biometric model for power calculations for haploid loci and have developed software to perform these calculations. We have verified our calculations with independent mathematical methods. CONCLUSION: Our results fill a need in power calculations for QTL mapping studies. Furthermore, failure to appropriately model haploid loci may cause underestimation of power.


Subject(s)
Chromosome Mapping/methods , Haploidy , Quantitative Trait Loci , Computer Simulation , Humans , Male
20.
Mol Cytogenet ; 2: 5, 2009 Feb 13.
Article in English | MEDLINE | ID: mdl-19216786

ABSTRACT

BACKGROUND: Characterization of disease-associated balanced translocations has led to the discovery of genes responsible for many disorders, including syndromes that include various forms of diabetes mellitus. We studied a man with unexplained maturity onset diabetes of the young (MODY)-like diabetes and an apparently balanced translocation [46,XY,t(7;10)(q22;p12)] and sought to identify a novel diabetes locus by characterizing the translocation breakpoints. RESULTS: Mutations in coding exons and splice sites of known MODY genes were first ruled out by PCR amplification and DNA sequencing. Fluorescent in situ hybridization (FISH) studies demonstrated that the translocation did not disrupt two known diabetes-related genes on 10p12. The translocation breakpoints were further mapped to high resolution using FISH and somatic cell hybrids and the junctions PCR-amplified and sequenced. The translocation did not disrupt any annotated transcription unit. However, the chromosome 10 breakpoint was 220 kilobases 5' to the Membrane Protein, Palmitoylated 7 (MPP7) gene, which encodes a protein required for proper cell polarity. This biological function is shared by HNF4A, a known MODY gene. Databases show MPP7 is highly expressed in mouse pancreas and is expressed in human islets. The translocation did not appear to alter lymphoblastoid expression of MPP7 or other genes near the breakpoints. CONCLUSION: The balanced translocation and MODY-like diabetes in the proband could be coincidental. Alternatively, the translocation may cause islet cell dysfunction by altering MPP7 expression in a subtle or tissue-specific fashion. The potential roles of MPP7 mutations in diabetes and perturbed islet cell polarity in insulin secretion warrant further study.

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