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1.
J Phys Condens Matter ; 33(34)2021 Jul 01.
Article in English | MEDLINE | ID: mdl-34098548

ABSTRACT

Lithium-sulfur batteries are considered one of the possible next-generation energy-storage solutions, but to be commercially available many drawbacks have yet to be solved. One solution with great potentiality is the use of lithium sulfide as cathode material since it can be coupled to Li-free anodes, such as graphite, Si or Sn. Nevertheless, Li2S, like sulfur, is electronically and ionically insulating, with a high activation potential for its initial oxidation step. To overcome this issue, different strategies have been explored, one of them being the use of catalytic surfaces. In the present article, we study using first principles calculations the effect of the dielectric constant of the solvent on the activation energy of the cleavage reaction of Li2S on different catalytic surfaces. To the best of our knowledge, this is the first time that such a study is undertaken. We find that the effect of the solvent should be twofold: on one side, it should decrease the interaction between the Li2S molecule and the surface. On the other side, since the species arising in the dissociation reaction are charged, the solvent should decrease the activation barrier for the dissociation of the Li2S molecule, when compared with the reaction in vacuum. These theoretical findings are discussed in connection with experimental results from the literature, where the behaviour of the Li-S cathode is studied in different solvents.

2.
Phys Chem Chem Phys ; 22(43): 25112-25117, 2020 Nov 21.
Article in English | MEDLINE | ID: mdl-33118550

ABSTRACT

The surprisingly rich chemistry of mechanically activated cleavage of disulfide bonds has been uncovered only recently. Using a disulfide protein mimic together with Cleland's reagent (DTT) as the attacking nucleophile in aqueous solution, our isotensional ab initio simulations add another surprise to the list. They unveil that noncovalent chalcogen-chalcogen 1,5-type SO interactions involving the S-S bridge and γ-carbonyl O are controlling the mechanochemical reactivity of disulfides at very low forces, thus adding a third reactivity regime to the hitherto known ones. In stark contrast to what is found in aqueous solution, no such chalcogen bonding arrangements are observed in the gas phase, which supports the conclusion that water plays a crucial role in stabilizing preferred conformations that support noncovalent SO bonds. These findings open the door to investigate chalcogen bonding in the realm of proteins using single-molecule force spectroscopy.

3.
Phys Rev Lett ; 122(8): 086801, 2019 Mar 01.
Article in English | MEDLINE | ID: mdl-30932588

ABSTRACT

Thiolated gold nanointerfaces play a key role in numerous fields of science, technology, as well as modern medicine to coat, functionalize, and protect. Our computational study reveals that the mechanical vs thermal stabilities of aliphatic thiolates on gold surfaces are strikingly different from those of aromatic thiolates. The aliphatic thiolates feature, at the same time, a higher thermal desorption energy but a lower mechanical rupture force than thiophenolates. Our analysis discloses that this most counterintuitive property is due to different mechanochemical detachment mechanisms. Electronic structure analyses along the detachment pathways trace this back to the distinct electronic properties of the S─Au bond in stretched nanojunctions. The discoveries that it is a higher thermal stability that entails a lower mechanical stability and that mechanical loads generate different local nanostructures depending on the nature of the thiolate are highly relevant for the rational design of improved thiol-gold nanocontacts.

4.
Phys Rev Lett ; 114(7): 075501, 2015 Feb 20.
Article in English | MEDLINE | ID: mdl-25763962

ABSTRACT

The effect of the chain length separating sulfur atoms in bidentate thiols attached to defective gold surfaces on the rupture of the respective molecule-gold junctions has been studied computationally. Thermal desorption always yields cyclic disulfides. In contrast, mechanochemical desorption leads to cyclic gold complexes, where metal atoms are extracted from the surface and kept in tweezer-like arrangements by the sulfur atoms. This phenomenon is rationalized in terms of directional mechanical manipulation of Au-Au bonds and Au-S coordination numbers. Moreover, the flexibility of the chain is shown to crucially impact on the mechanical strength of the junction.

5.
Dalton Trans ; 44(12): 5520-34, 2015 Mar 28.
Article in English | MEDLINE | ID: mdl-25698135

ABSTRACT

A detailed kinetic study has been carried out for the aminolysis of ionizable Fischer thiocarbene complexes (CO)5M[double bond, length as m-dash]C(SR)CH3 (M = Cr, W; R = iPr, nBu, cHex, tBu) with five primary amines and one secondary amine in aqueous acetonitrile solutions (50% MeCN-50% water (v/v)). The observed rate constants for the reaction with primary amines showed a first-order dependence on the amine concentration, while with morpholine, the rate constant has second-order dependence. The general base catalysis process was confirmed by the variation of the rate constants with the concentration of an external catalyst and the pH. The results agree with a stepwise mechanism where the nucleophilic addition to the carbene carbon to produce a tetrahedral intermediate (T±) is the first step, followed by a rapid deprotonation of to form the anion T- which leads to the products by general-acid catalysed leaving group (-SR) expulsion. In general, it was found that the chromium complexes are less reactive than the tungsten analogues. The obtained Brønsted parameters for the nucleophilic addition (ßnuc) indicate that C-N bond formation has made little progress at the transition state. By using Charton's correlation, the role that the steric factor plays throughout the mechanism has been unraveled. The nucleophilic addition to the thiocarbenes is less sensitive to steric effects than the alkoxycarbenes regardless of the nature of the metal centre. Conversely, the steric effects on the general-base catalysis can be strong depending on the volume of the catalyst and the metal centre. On the basis of the structure-reactivity coefficients ß and ψ and comparison with alkoxycarbene complexes, esters and thiolesters, insights into the main factors ruling the reactivity in terms of transition state imbalances are discussed.

6.
J Chem Theory Comput ; 8(11): 4539-45, 2012 Nov 13.
Article in English | MEDLINE | ID: mdl-26605613

ABSTRACT

An accelerated dynamics scheme is employed to sample the configurational space of a system consisting of an alkanedithiol molecule confined to the gap between a metal tip and a perfect metal surface. With this information and by means of nonequilibrium green functions techniques (NEGF), conductance calculations are performed. The present results show that even for this system, which is one of the most simple conceivable because of the perfectness of the surface, a complex behavior appears due to the occurrence of an unexpected tip-molecule-surface arrangement, where the insertion of one of the molecular ends into the tip-surface gap generates configurations with strongly enhanced conductance. Estimates are also made for the time required to generate the molecular junction, indicating that it should depend on the tip-surface distance, thus opening the way to new experiments in this direction.

7.
J Org Chem ; 71(6): 2395-401, 2006 Mar 17.
Article in English | MEDLINE | ID: mdl-16526789

ABSTRACT

Rate constants for the hydrolysis of Fischer carbenes (CO)5Cr=C(OR)Ph (R = n-propyl, neopentyl, isopropyl, and menthyl) in 50% MeCN-50% water (v/v) at 25 degrees C are reported. The rate constants for the addition of -OH to the carbene carbon are 5.3, 3.7, 0.84, and 0.01 M(-1) s(-1), respectively. These rate constants give linear correlations with the corresponding rate constants for the hydrolysis of esters such as acetate, benzoate, and formiate. The slopes of the plots of the observed rate constants for the carbenes vs the rate constants for the esters are 1.4 and 1.2 for acetate and benzoate, respectively, indicating that the factors that decrease the reactivity of the two types of compounds are similar, but the carbenes show higher sensitivity. The rate constants are well correlated with several steric parameters giving a value of -3.84 for the Charton's psi parameter. The results show that the steric bulkiness of the R group is the main factor determining the reactivity differences for these carbene complexes.


Subject(s)
Methane/analogs & derivatives , Hydrocarbons/chemical synthesis , Hydrocarbons/chemistry , Hydrogen-Ion Concentration , Hydrolysis , Methane/chemical synthesis , Methane/chemistry , Molecular Structure
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