Molecular dynamics simulations suggest the potential toxicity of fluorinated graphene to HP35 protein via unfolding the α-helix structure.

Fluorinated graphene, a two-dimensional nanomaterial composed of three atomic layers, a central carbon layer sandwiched between two layers of fluorine atoms, has attracted considerable attention across various fields, particularly for its potential use in biomedical applications. Nonetheless, scant effort has been devoted to assessing the potential toxicological implications of this nanomaterial. In this study, we scrutinize the potential impact of fluorinated graphene on a protein model, HP35 by utilizing extensive molecular dynamics (MD) simulation methods. Our MD results elucidate that upon adsorption to the nanomaterial, HP35 undergoes a denaturation process initiated by the unraveling of the second helix of the protein and the loss of the proteins hydrophobic core. In detail, substantial alterations in various structural features of HP35 ensue, including alterations in hydrogen bonding, Q value, and RMSD. Subsequent analyses underscore that hydrophobic and van der Waals interactions (predominant), alongside electrostatic energy (subordinate), exert influence over the adsorption of HP35 on the fluorinated graphene surface. Mechanistic scrutiny attests that the unrestrained lateral mobility of HP35 on the fluorinated graphene nanomaterial primarily causes the exposure of HP35's hydrophobic core, resulting in the eventual structural denaturation of HP35. A trend in the features of 2D nanostructures is proposed that may facilitate the denaturation process. Our findings not only substantiate the potential toxicity of fluorinated graphene but also unveil the underlying molecular mechanism, which thereby holds significance for the prospective utilization of such nanomaterials in the field of biomedicine.

Kinetics and selectivity of methane oxidation on an IrO2(110) film.

Undercoordinated, bridging O-atoms (Obr) are highly active as H-acceptors in alkane dehydrogenation on IrO2(110) surfaces but transform to HObrgroups that are inactive toward hydrocarbons. The low C-H activity and high stability of the HObrgroups cause the kinetics and product selectivity during CH4oxidation on IrO2(110) to depend sensitively on the availability of Obratoms prior to the onset of product desorption. From temperature programmed reaction spectroscopy (TPRS) and kinetic simulations, we identified two Obr-coverage regimes that distinguish the kinetics and product formation during CH4oxidation on IrO2(110). Under excess Obrconditions, when the initial Obrcoverage is greater than that needed to oxidize all the CH4to CO2and HObrgroups, complete CH4oxidation is dominant and produces CO2in a single TPRS peak between 450 and 500 K. However, under Obr-limited conditions, nearly all the initial Obratoms are deactivated by conversion to HObror abstracted after only a fraction of the initially adsorbed CH4oxidizes to CO2and CO below 500 K. Thereafter, some of the excess CHxgroups abstract H and desorb as CH4above ∼500 K while the remainder oxidize to CO2and CO at a rate that is controlled by the rate at which Obratoms are regenerated from HObrduring the formation of CH4and H2O products. We also show that chemisorbed O-atoms ('on-top O') on IrO2(110) enhance CO2production below 500 K by efficiently abstracting H from Obratoms and thereby increasing the coverage of Obratoms available to completely oxidize CHxgroups at low temperature. Our results provide new insights for understanding factors which govern the kinetics and selectivity during CH4oxidation on IrO2(110) surfaces.