Facile and phase-defined determination of HLA alleles with morpholino-functionalized nanoparticle probes.

A number of human leukocyte antigen (HLA) gene alleles have been found to be genetic risk markers for immunologically mediated drug hypersensitivity. Clinical adoption of HLA pharmacogenomics requires facile and accurate allele screening assays. As HLA genes are highly polymorphic, currently available methods are usually labor-intensive and liable to generate false positives. Herein we report a general strategy for screening HLA alleles with nanoparticle probes. Specific HLA alleles can be identified by gauging three to five sequence variants. Single-polymerase chain reaction (PCR) and dual-PCR methods have been proposed to achieve phase-defined determination of the sequence variants. Morpholino-functionalized gold nanoparticle probes allow for colorimetric and highly specific detection. Assays for HLA-B*58:01 and HLA-B*15:02 have been developed and validated with 49 selected human genomic DNA samples. The facile nanoparticle probe-based assays can be implemented easily in molecular diagnostic laboratories for accurate and cost-effective screening of HLA alleles.

Sequence-selective recognition of nucleic acids under extremely low salt conditions using nanoparticle probes.

Extensive secondary structures in nucleic acid targets seriously impede the binding of complementary oligonucleotide probes. We report here a method to conduct the detection under extremely low salt conditions where the secondary structures are less stable and more accessible. A new type of nanoparticle probes prepared by functionalizing gold nanoparticles with nonionic morpholino oligos is employed. Because of the salt-independent hybridization of the probes with nucleic acid targets, nanoparticle assemblies can be formed in 2 mM Tris buffer solutions containing 0-5 mM NaCl, leading to the colorimetric target recognition. The sharp melting transitions of the target-probe hybrids allow discrimination of single-base imperfection, including substitution, deletion, and insertion. The method works effectively in detecting sequences that are likely to form secondary structure. In addition, the study provides direct evidence of the relationship between the aggregate structure and the melting behavior of the DNA-linked nanoparticles.

Coordination of mercury(II) to gold nanoparticle associated nitrotriazole towards sensitive colorimetric detection of mercuric ion with a tunable dynamic range.

A simple colorimetric assay with high sensitivity, excellent selectivity and a tunable dynamic range is reported for detecting trace amounts of mercuric ion in aqueous solution based on the coordination of Hg(2+) to the gold nanoparticle (AuNP)-associated 3-nitro-1H-1,2,4-triazole (NTA). The NTA can stabilize the AuNPs against tris-induced aggregation through capping the AuNPs. In the presence of Hg(2+), the NTA is released from the AuNP surface via the formation of a NTA-Hg(2+) coordination complex, leading to the aggregation of AuNPs in tris. This detection strategy is unique in terms of high sensitivity and excellent selectivity, a tunable dynamic range, and simplicity of probe preparation. Low detection limits of 7 nM (1.4 ppb) and 50 nM (10 ppb) can be achieved by spectrophotometer and by direct visualization, respectively, under the optimized conditions. No noticeable colour changes are observed towards other metal ions (Ag(+), Zn(2+), Ni(2+), Cr(3+), Mg(2+), Cu(2+), Co(2+), Cd(2+), Pb(2+), Fe(2+)) at concentrations up to 100 µM without the need of any other masking agents. In addition, the dynamic range of the assay can be easily tuned by adjusting the amount of NTA in the NTA-AuNP probes. More importantly, the NTA-AuNP probes can be simply prepared by mixing NTA with as-synthesized citrate-capped AuNPs. This not only avoids complicated surface modifications and tedious separation processes, but also is cost-effective.

Electrogenerated chemiluminescence of platinum(II) alkynyl terpyridine complex with peroxydisulfate as coreactant.

A Pt(II) alkynyl terpyridine complex containing a carbazole moiety, [Pt((t)Bu(3)tpy)(C≡C-C(6)H(4)-4-carbazole-9)](+) ((t)Bu(3)tpy = 4,4',4''-tri-tert-butyl-2,2':6',2''-terpyridine) 1, has been synthesized and characterized. The photophysical behavior has been studied, and the molecular structure has been determined by X-ray crystallography. The complex was found to exhibit intense electrogenerated chemiluminescence (ECL) using peroxydisulfate (S(2)O(8)(2-)) as coreactant in acetonitrile/water (1-25%, v/v) mixture at both glassy carbon and gold electrodes, representing the first ECL example of the Pt(II) alkynyl family. The ECL was produced at potential corresponding to the first reduction wave (-0.90 V vs SCE), significantly shifted by ∼0.65 V toward more positive potential compared with that of [Ru(bpy)(3)](2+) (bpy = 2,2'-bipyridine). The ECL spectrum was found to be identical to the photoluminescence spectrum recorded in the same medium, indicating the formation of the same excited state of dπ(Pt) → π*((t)Bu(3)tpy) (3)MLCT mixed with π(C≡CR) → π*((t)Bu(3)tpy) (3)LLCT in both cases. The ECL mechanism was proposed involving the formation of the strongly oxidizing intermediate, SO(4)(•-), mainly generated during the catalytic reduction of S(2)O(8)(2-) by the electrogenerated 1(-). Chemiluminescence of 1/S(2)O(8)(2-) based on reduction with Al metal is also described.

Facile and controllable loading of single-stranded DNA on gold nanoparticles.

A facile strategy of loading thiolated single-stranded DNA (ss-DNA) on gold nanoparticles (NPs) has been developed. The gold NPs stabilized by nonionic fluorosurfactant (i.e., Zonyl FSN) are simply mixed with the thiolated ssDNA in the presence of NaCl (up to 1.0 M), and the ssDNA-NP conjugates are attained after an incubation of 2 h. The loading density of the ssDNA is controlled by the salt concentration in the immobilization solution. The FSN capping layer inhibits effectively the nonspecific adsorption of nucleobases on the NPs but allows for rapid attachment of the thiolated ssDNA through the sulfur-gold linkage, which may lead to an upright orientation of the immobilized ssDNA. The maximum loading density of the ssDNA obtained in 1.0 M NaCl is sensitive to several factors, such as the type of the spacer, the length of the ssDNA strands, and the NP size. The hybridization behavior of the ssDNA-NP conjugates with complementary ssDNA in solution was examined. For the conjugates of 13 nm-diameter NPs, the hybridization efficiency can reach approximately 60% when the surface density of the ssDNA on the gold NP is lower than approximately 15 pmol/cm(2). As the ssDNA probes are more densely packed on the NPs, the hybridization efficiency drops consequently.

Molecular and nanoparticle postcolumn reagents for assay of low-molecular-mass biothiols using high-performance liquid chromatography.

Determination of low-molecular-mass (LMM) biothiols in biological matrixes is of importance in the studies of their related bio-processes and for the clinical diagnostics of a variety of diseases. Standard method for the assay of the small biothiols is in demand. Postcolumn techniques used in high-performance liquid chromatography (HPLC) allow automation of the derivatization step and, therefore, are suitable for standardization of HPLC analysis. This paper gives an overview of the existing reaction systems useful for the postcolumn assay of the LMM biothiol molecules in conjunction with HPLC. The postcolumn reagents are classified by the types of their reactions with thiol-containing compounds. The chemical reactivity and selectivity as well as the spectroscopic characteristics of the postcolumn reagents have been addressed. The emerging strategies of using nanoparticles as thiol-reactive reagents and their applications in postcolumn detection of the LMM biothiols have also been discussed in detail.

Electrogenerated chemiluminescence of a bis-cyclometalated alkynylgold(iii) complex with irreversible oxidation using tri-n-propylamine as co-reactant.

Intense electrogenerated chemiluminescence of a bis-cyclometalated alkynylgold(iii) complex using tri-n-propylamine as a co-reactant at the fluorosurfactant-modified gold electrode has been observed for the first time.

Electrochemiluminescence of ruthenium(II) complexes functionalized with crown ether pendants and effects of cation binding.

Electrochemiluminescence (ECL) of a series of ruthenium(II) diimine complexes with appended crown ethers derived from 1,10-phenanthroline was studied via either the annihilation route or the coreactant schemes, and the ECL efficiency has been determined. The effect of an FSN surfactant on the ECL properties was also studied in buffer solutions. The effect of cation binding on the ECL behavior was examined. The ECL intensity of [Ru(bpy)2(phen-2NH)](ClO4)2 has been found to be strongly enhanced upon binding with Zn2+ and alkaline-earth metal ions. The X-ray crystal structure of [Ru(bpy)2(phen-2NH)](ClO4)2 has also been determined.

Multifunctional ruthenium(II) polypyridine complex-based core-shell magnetic silica nanocomposites: magnetism, luminescence, and electrochemiluminescence.

Multifunctional nanoparticles (NPs) that consist of silica-coated magnetic cores and luminescent ruthenium(II) polypyridine complexes have been prepared. These multifunctional nanocomposites were shown to exhibit superparamagnetic behavior, high emission intensity, and electrochemiluminescence. An intense low-oxidation-potential electrochemiluminescence signal was observed by attachment of these functional NPs onto a fluorosurfactant-modified gold (Au(m)) electrode via application of an external magnetic field.

Gold nanoparticle-modified ITO electrode for electrogenerated chemiluminescence: well-preserved transparency and highly enhanced activity.

Although it is desirable to use transparent indium tin oxide (ITO)-coated glass substrates as working electrodes for electrogenerated chemiluminescence (ECL), their applications in ECL studies of the Ru(bpy)32+ (bpy, 2,2'-bipyridine)/tri-n-propylamine (TPrA) system have been limited because of the large overpotential of TPrA oxidation and the instability of the ITO surface at high anodic potentials. Here, we describe a simple method to achieve high ECL activity using ITO electrodes modified with gold nanoparticles (GNPs). The GNPs have been capped with fluorosurfactant ligands (i.e., Zonyl FSO). Much more facile TPrA oxidation was achieved by using the modified electrode, and an intense low-oxidation-potential (LOP) ECL signal was observed at approximately 0.88 V versus SCE. The electrode transmittance drop upon modification was generally less than 5% over the visible spectrum when small-sized GNPs (approximately 4 nm) were employed. The well-preserved transparency and highly enhanced activity make the modified electrode promising for ECL studies.

Oxidation of L-cysteine at a fluorosurfactant-modified gold electrode: lower overpotential and higher selectivity.

We describe the oxidation of L-cysteine (CySH) at a fluorosurfactant (i.e., Zonyl FSO)-modified gold electrode (FSO-Au). Significantly reduced anodic overpotential of CySH was observed. The FSO layer inhibited the adsorption of CySH and its oxidation products at the gold electrode surface, and the low coverage of the adsorbed thiol-containing species might account for the more facile electron-transfer kinetics of free CySH at low potentials. An electrochemical impedance spectroscopy study revealed the lower charge-transfer resistance of CySH oxidation at the FSO-Au electrode as compared to that at a bare gold electrode. Interestingly, although the FSO layer facilitated CySH oxidation, the anodic responses of other electroactive biological species such as glucose, uric acid, and ascorbic acid were generally suppressed. Furthermore, the modified electrode was capable of differentiating CySH from other low-molecular-mass biothiols such as homocysteine and glutathione. The unique features of the FSO-Au electrode allowed for the development of a highly selective method of detecting CySH in complex biological matrices. The direct determination of free reduced and total CySH in human urine samples has been successfully carried out without the assistance of any separation techniques.

Nonionic surfactant-capped gold nanoparticles as postcolumn reagents for high-performance liquid chromatography assay of low-molecular-mass biothiols.

Gold nanoparticles (GNPs) have been stabilized with nonionic surfactant ligands, i.e., Brij 35, and their aggregation could be induced rapidly and selectively by biologically active low-molecular-mass thiols including sulphydryl-containing amino acids (cysteine and homocysteine) and small peptides (glutathione, cysteinylglycine, and glutamylcysteine). A new postcolumn detection method has been developed for high-performance liquid chromatography (HPLC) assay of these small biothiols based on the analyte-induced aggregation of the GNPs. Compared with conventional thiol-reactive probes, the GNP colloids are easier to prepare, much more stable in aqueous solution over a wide pH range and at ambient temperature, and exhibit relatively high selectivity toward small biothiols. The analysis of human urine samples demonstrated that the proposed method is promising in HPLC assay of the small thiol molecules in biological fluids.

Specific postcolumn detection method for HPLC assay of homocysteine based on aggregation of fluorosurfactant-capped gold nanoparticles.

Gold nanoparticles (GNPs) capped with nonionic fluorosurfactant molecules (Zonyl FSN) were synthesized, and with the colloidal solution as a probe reagent, a new postcolumn colorimetric detection method for HPLC assay of homocysteine (Hcy) has been developed. The FSN-capped GNPs exhibited excellent stability in aqueous solutions, even in the presence of high salt. The aggregation of the GNPs could be induced by either Hcy or cysteine, resulting in an absorption decrease of the colloidal solution at 525 nm and an absorption increase at longer wavelengths (600-700 nm); however, the GNPs did not respond to other amino acids and biomolecules such as glutathione, cysteinylglycine, and glucose. Under optimal conditions (i.e., high salt, neutral pH, and approximately 70 degrees C), the color change of the GNP solution could almost complete ( approximately 90%) within approximately 30 s upon the addition of Hcy. The high selectivity and very fast kinetics of the reaction make it a promising system for HPLC postcolumn detection. The new technique has been employed to determine total Hcy levels in human urine and plasma samples, and the results are satisfactory.

Specific detection of cysteine and homocysteine: recognizing one-methylene difference using fluorosurfactant-capped gold nanoparticles.

Aggregation of fluorosurfactant-capped gold nanoparticles could be induced selectively by cysteine and homocysteine and, when solution ionic strength was low, the kinetics of homocysteine-induced aggregation of large size nanoparticles (approximately 40 nm) was much faster than that induced by cysteine, leading to specific detection of homocysteine in the presence of excess cysteine.

Emission of tris(2,2'-bipyridine)ruthenium(II) by coreactant electrogenerated chemiluminescence: from O2-insensitive to highly O2-sensitive.

We describe the influence of dissolved oxygen on the emission of Ru(bpy)3(2+) (bpy = 2,2'-bipyridine) by electrogenerated chemiluminescence (ECL) with tertiary amine as coreactant in aqueous solutions. The significance of the reactions between molecular oxygen and the ECL intermediate reducing radicals has been demonstrated for the first time. By varying the experimental conditions, the oxygen effect on different ECL routes of the Ru(bpy)3(2+)/tri-n-propylamine (TPrA) system was examined. When coreactant direct oxidation played a predominant role in producing ECL, the maximum emission intensity, especially that of the low-oxidation-potential (LOP) ECL, could change from O2-insensitive to highly O2-sensitive with decreasing TPrA concentration. This behavior can be interpreted as follows: A large excess of intermediate reducing radicals was produced at high [TPrA], and the dissolved oxygen within the ECL reaction layer was completely reduced by these radicals and exerted no quenching effect on the emission. At low [TPrA], however, coreactant oxidation generated a relatively small amount of reducing intermediates, and molecular oxygen acted as an interceptor, destroying the intermediates before they participated in the ECL pathways, which led to the obvious reduction of the emission intensity. In the latter case, the less efficient LOP ECL route was more remarkably affected. When ECL was generated primarily via the catalytic route at high [Ru(bpy)3(2+)], the reactions consuming the intermediate radicals by O2 became insignificant, and he drop of emission intensity in the presence of oxygen could mainly be ascribed to the excited-state quenching. A similar oxygen effect was also observed for the Ru(bpy)3(2+)/triethylamine (TEA) system.

Highly efficient quenching of coreactant electrogenerated chemiluminescence by phenolic compounds.

We describe the quenching effects of phenolic compounds on the electrogenerated chemiluminescence (ECL) of the Ru(bpy)3(2+) (bpy = 2,2'-bipyridine)/tri-n-propylamine (TPrA) system in aqueous solution. First, the emissions via different ECL routes were examined in the presence of 1,4-benzoquinone. It was found that the interception of the ECL intermediate radicals by the quencher molecules significantly influenced the light emission, especially when the direct coreactant oxidation played a predominant role in producing ECL. The most efficient quenching was observed for the low-oxidation-potential (LOP) ECL at a low concentration of TPrA (<5 mM). The Stern-Volmer constant (K(SV)) of the LOP ECL quenching could be as high as 1.3 x 10(6) M(-1), approximately 700 times larger than that of the photoluminescence quenching. Other phenolic compounds, such as phenol, hydroquinone, catechol, and dopamine, would be oxidized at the potential where the ECL was generated, and the benzoquinone-containing products exhibited ECL quenching effects similar to that of 1,4-benzoquinone. The highly efficient quenching of the LOP ECL by the phenolic compounds may provide a new approach for the determination of these pharmaceutically and environmentally important molecules.

Effect of nonionic fluorosurfactant on the electrogenerated chemiluminescence of the tris(2,2'-bipyridine)ruthenium(II)/tri-n-propylamine system: lower oxidation potential and higher emission intensity.

Fluorosurfactants are commercially available, and their applications in electrochemical systems have been the interest of many studies. Here, we describe a novel effect of a nonionic fluorosurfactant (Zonyl FSN) on the electrogenerated chemiluminescence (ECL) of the tris(2,2'-bipyridine)ruthenium(II)/tri-n-propylamine (TPrA) system at gold and platinum electrodes. Compared with its hydrocarbon analogue (Triton X-100), the adsorbed fluorosurfactant species not only rendered the electrode surfaces more hydrophobic but also significantly retarded the growth of the electrode oxide layers. As a result, more facile direct oxidation of TPrA was achieved, which led to the appearance of a low oxidation potential ECL signal (below 1.0 V vs SCE). At the gold electrode, the ECL peak appeared at 0.82 V, approximately 400 mV more negative than usual; while its intensity was approximately 50 times higher. The generation of the intense ECL signal at low oxidation potential may lead to the development of more efficient ECL analysis.

Reduction potentials of Rieske clusters: importance of the coupling between oxidation state and histidine protonation state.

Rieske [2Fe-2S] clusters can be classified into two groups, depending on their reduction potentials. Typical high-potential Rieske proteins have pH-dependent reduction potentials between +350 and +150 mV at pH 7, and low-potential Rieske proteins have pH-independent potentials of around -150 mV at pH 7. The pH dependence of the former group is attributed to coupled deprotonation of the two histidine ligands. Protein-film voltammetry has been used to compare three Rieske proteins: the high-potential Rieske proteins from Rhodobacter sphaeroides (RsRp) and Thermus thermophilus (TtRp) and the low-potential Rieske ferredoxin from Burkholderia sp. strain LB400 (BphF). RsRp and TtRp differ because there is a cluster to serine hydrogen bond in RsRp, which raises its potential by 140 mV. BphF lacks five hydrogen bonds to the cluster and an adjacent disulfide bond. Voltammetry measurements between pH 3 and 14 reveal that all the proteins, including BphF, have pH-dependent reduction potentials with remarkably similar overall profiles. Relative to RsRp and TtRp, the potential versus pH curve of BphF is shifted to lower potential and higher pH, and the pK(a) values of the histidine ligands of the oxidized and reduced cluster are closer together. Therefore, in addition to simple electrostatic effects on E and pK(a), the reduction potentials of Rieske clusters are determined by the degree of coupling between cluster oxidation state and histidine protonation state. Implications for the mechanism of quinol oxidation at the Q(O) site of the cytochrome bc(1) and b(6)f complexes are discussed.