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1.
G Ital Dermatol Venereol ; 149(5): 555-65, 2014 Oct.
Article in English | MEDLINE | ID: mdl-24975949

ABSTRACT

Hair disorders are frequently observed in various systemic diseases, including autoimmune connective tissue diseases (CTDs), with predilection of lupus erythematosus (LE), followed by dermatomyositis (DM) and scleroderma. Hair disorders in CTDs may manifest as various clinical patterns, such as telogen hair loss, diffuse thinning or fragility of hair, and scarring alopecia. Less common hair disorders include anagen effluvium, alopecia areata, and trichomegaly. Some drugs used to treat CTDs may cause hair loss in a drug-related manner or hyperthrichosis. In the assessment of common hair loss patterns, such as telogen effluvium, the possible association with CTDs must be borne in mind and should not be overlooked. Alopecia appears to be a significant sign in the course of LE and especially systemic LE. In DM, the involvement of the scalp is common, and is often characterized by a diffuse, violaceous, scaly, non-scarring and symptomatic hair loss. Linear scleroderma en coup de sabre is an uncommon localized form of morphea with involvement of the paramedian forehead and frontal scalp, where it is associated with cicatricial alopecia. The most important variant of scarring alopecia in the context of CTDs is that associated with discoid lupus erythematosus (DLE). In the diagnostic work-up of DLE-related cicatrical alopecia, histopathological and immunopathological studies are useful, and a relevant role has been attributed to dermatoscopy (trichoscopy) over the last years. Hair loss has been reported in several other CTDs, including mixed and undifferentiated CTDs, and primary Sjögren's syndrome, although it is likely to be underestimated in such diseases.


Subject(s)
Alopecia/etiology , Connective Tissue Diseases/complications , Alopecia/pathology , Alopecia Areata/etiology , Alopecia Areata/pathology , Autoantibodies/immunology , Connective Tissue Diseases/drug therapy , Connective Tissue Diseases/immunology , Dermatomyositis/immunology , Dermatomyositis/pathology , Dermoscopy , Diagnosis, Differential , Hair/growth & development , Hair Follicle/pathology , Humans , Immunosuppressive Agents/adverse effects , Lupus Erythematosus, Discoid/immunology , Lupus Erythematosus, Discoid/pathology , Scalp Dermatoses/diagnosis , Scleroderma, Localized/pathology
2.
G Ital Dermatol Venereol ; 149(1): 25-45, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24566564

ABSTRACT

This review focuses on recent changes in the clinical, pathogenetic and therapeutic developments with regards to Alopecia Areata. Some new clinical forms and some phenomena have been described for the first time in recent years. Several phenomena previously observed such as the Renbok, the Koebner and the possibility that an exclamation mark hair can resume its physiological growth have been confirmed. The pathogenetic role of cytotoxic cells is increasingly evident, as well as the deficit of cells and the factors regulating the autoimmune response. The concept of immune privilege of the hair follicle has had further confirmation and have been identified some of the molecular mechanisms such as the expression of the receptors for killer lymphocytes on the trichokeratinocytes of the Outer Root Sheat. There is a renewed interest on the possible role of mast cell as a key element in the acute and chronic phases of the disease. New therapies are focused on the inhibition of the killer cells directed against antigens not yet fully specified of the hair follicle and on the restoration of the immune privilege of this structure. Alopecia Areata is a disease with high emotional impact, able to reduce the quality of life of patients and their family entourage. It is often frustrating for those affected and for the therapists due to its evolution quite unpredictable and the mixed response to the few validated therapies. Investment in research originate almost exclusively from voluntary associations of patients, which need to be known and supported.


Subject(s)
Alopecia Areata , Alopecia Areata/diagnosis , Alopecia Areata/epidemiology , Alopecia Areata/etiology , Alopecia Areata/immunology , Alopecia Areata/pathology , Alopecia Areata/therapy , Autoantibodies/analysis , Autoimmune Diseases/epidemiology , Autoimmunity , Cataract/epidemiology , Combined Modality Therapy , Comorbidity , Dermatologic Agents/therapeutic use , Dermoscopy , Diagnosis, Differential , Female , Genetic Association Studies , Genetic Predisposition to Disease , HLA-D Antigens/genetics , Hair Color , Hair Follicle/immunology , Hair Follicle/pathology , Humans , Hypersensitivity, Immediate/epidemiology , Immunotherapy , Infections/epidemiology , Male , Mental Disorders/epidemiology , Nail Diseases/epidemiology , Prevalence , Prognosis , Quality of Life , Stress, Psychological/complications
3.
Plant Biol (Stuttg) ; 15(6): 1019-24, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23574379

ABSTRACT

Polygalacturonase-inhibiting proteins (PGIPs) are cell wall leucine-rich repeat (LRR) proteins involved in plant defence. The hexaploid wheat (Triticum aestivum, genome AABBDD) genome contains one Pgip gene per genome. Tapgip1 (B genome) and Tapgip2 (D genome) are expressed in all tissues, whereas Tapgip3 (A genome) is inactive because of a long terminal repeat, Copia retrotransposon insertion within the coding region. To verify whether Tapgip1 and Tapgip2 encode active PGIPs and are involved in the wheat defence response, we expressed them transiently and analysed their expression under stress conditions. Neither TaPGIP1 nor TaPGIP2 showed inhibition activity in vitro against fungal polygalacturonases. Moreover, a wheat genotype (T. turgidum ssp. dicoccoides) lacking active homologues of Tapgip1 or Tapgip2 possesses PGIP activity. At transcript level, Tapgip1 and Tapgip2 were both up-regulated after fungal infection and strongly induced following wounding. This latter result has been confirmed in transgenic wheat plants expressing the ß-glucuronidase (GUS) gene under control of the 5'-flanking region of Tdpgip1, a homologue of Tapgip1 with an identical sequence. Strong and transient GUS staining was mainly restricted to the damaged tissues and was not observed in adjacent tissues. Taken together, these results suggest that Tapgips and their homologues are involved in the wheat defence response by acting at the site of the lesion caused by pathogen infection.


Subject(s)
Antifungal Agents/metabolism , Enzyme Inhibitors/metabolism , Gene Expression Regulation, Enzymologic , Plant Diseases/immunology , Plant Proteins/metabolism , Triticum/genetics , Ascomycota/physiology , Fusarium/physiology , Gene Expression Regulation, Plant , Genes, Reporter , Genotype , Plant Diseases/microbiology , Plant Leaves/genetics , Plant Leaves/immunology , Plant Leaves/microbiology , Plant Leaves/physiology , Plant Proteins/genetics , Plants, Genetically Modified , Triticum/immunology , Triticum/microbiology , Triticum/physiology , Up-Regulation
4.
G Ital Dermatol Venereol ; 148(2): 225-9, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23588149

ABSTRACT

Anecdotical experiences indicate that Koebner phenomenon (KP) can also be observed in alopecia areata (AA). The present short report gives an account of what has been observed in some patients with remitting-relapsing AA in multiple patches, in whom the phenomenon was accidentally caused by perilesional Trichogram. The almost immediate appearance of relapses of the disease (1-7 days) and their evolution can be useful to understand the physiopathology of AA and and emphasize the compelling need for a rapid and appropriate diagnosis and treatment in the acute phase of AA, even with the active participation of the patient adequately trained. The method of trichogram should be reserved for cases in which non-invasive methods such as the Pull Test or Trichoscopy are not sufficient to verify the activity of the disease.


Subject(s)
Alopecia Areata/drug therapy , Alopecia Areata/pathology , Betamethasone/administration & dosage , Clobetasol/administration & dosage , Dermoscopy/adverse effects , Glucocorticoids/administration & dosage , Hair Follicle/drug effects , Administration, Cutaneous , Administration, Oral , Adolescent , Adult , Alopecia Areata/etiology , Alopecia Areata/physiopathology , Drug Therapy, Combination , Female , Hair Follicle/blood supply , Hair Follicle/growth & development , Hair Follicle/pathology , Hair Follicle/physiopathology , Humans , Male , Quality of Life , Recurrence , Severity of Illness Index , Skin/pathology , Time Factors , Treatment Outcome
5.
Plant Biol (Stuttg) ; 14(2): 365-73, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21972933

ABSTRACT

Pectin is an important component of the plant cell wall and its remodelling occurs during normal plant growth or following stress responses. Pectin is secreted into the cell wall in a highly methyl-esterified form and subsequently de-methyl-esterified by pectin methyl esterase (PME), whose activity is controlled by the pectin methyl esterase inhibitor protein (PMEI). Cereal cell wall contains a low amount of pectin; nonetheless the level and pattern of pectin methyl esterification play a primary role during development or pathogen infection. Since few data are available on the role of PMEI in plant development and defence of cereal species, we isolated and characterised three Pmei genes (Tdpmei2.1, Tdpmei2.2 and Tdpmei3) and their encoded products in wheat. Sequence comparisons showed a low level of intra- and inter-specific sequence conservation of PMEIs. Tdpmei2.1 and Tdpmei2.2 share 94% identity at protein level, but only 20% identity with the product of Tdpmei3. All three Tdpmei genes code for functional inhibitors of plant PMEs and do not inhibit microbial PMEs or a plant invertase. RT-PCR analyses demonstrated, for the first time to our knowledge, that Pmei genes are regulated by intron retention. Processed and unprocessed transcripts of Tdpmei2.1 and Tdpmei2.2 accumulated in several organs, but anthers contained only mature transcripts. Tdpmei3 lacks introns and its transcript accumulated mainly in stem internodes. These findings suggest that products encoded by these Tdpmei genes control organ- or tissue-specific activity of specific PME isoforms in wheat.


Subject(s)
Carboxylic Ester Hydrolases/antagonists & inhibitors , Gene Expression Regulation, Plant/genetics , Genes, Plant/genetics , Introns/genetics , Triticum/genetics , Amino Acid Sequence , Cell Wall/metabolism , DNA, Plant/genetics , Enzyme Inhibitors , Esterification , Flowers/genetics , Flowers/growth & development , Flowers/metabolism , Molecular Sequence Data , Organ Specificity , Pectins/metabolism , Plant Leaves/genetics , Plant Leaves/growth & development , Plant Leaves/metabolism , Plant Proteins/antagonists & inhibitors , Plant Proteins/genetics , Plant Stems/genetics , Plant Stems/growth & development , Plant Stems/metabolism , RNA, Plant/genetics , Sequence Alignment , Sequence Homology, Amino Acid , Triticum/growth & development , Triticum/metabolism
6.
Plant Biol (Stuttg) ; 14 Suppl 1: 31-8, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21974721

ABSTRACT

Fusarium head blight (FHB), caused by Fusarium graminearum, is one of the most important diseases of wheat worldwide, resulting in yield losses and mycotoxin contamination. The molecular mechanisms regulating Fusarium penetration and infection are poorly understood. Beside mycotoxin production, cell wall degradation may play a role in the development of FHB. Many fungal pathogens secrete polygalacturonases (PGs) during the early stages of infection, and plants have evolved polygalacturonase-inhibiting proteins (PGIPs) to restrict pectin degradation during fungal infection. To investigate the role of plant PGIPs in restricting the development of FHB symptoms, we first used Arabidopsis thaliana, whose genome encodes two PGIPs (AtPGIP1 and AtPGIP2). Arabidopsis transgenic plants expressing either of these PGIPs under control of the CaMV 35S promoter accumulate inhibitory activity against F. graminearum PG in their inflorescences, and show increased resistance to FHB. Second, transgenic wheat plants expressing the bean PvPGIP2 in their flowers also had a significant reduction of symptoms when infected with F. graminearum. Our data suggest that PGs likely play a role in F. graminearum infection of floral tissues, and that PGIPs incorporated into wheat may be important for increased resistance to FHB.


Subject(s)
Arabidopsis/immunology , Disease Resistance , Fusarium/pathogenicity , Plant Diseases/genetics , Plant Proteins/metabolism , Triticum/immunology , Arabidopsis/genetics , Arabidopsis/microbiology , Flowers/immunology , Flowers/microbiology , Gene Expression Regulation, Plant , Host-Pathogen Interactions , Plant Diseases/microbiology , Plant Immunity , Plant Proteins/genetics , Plants, Genetically Modified/genetics , Plants, Genetically Modified/microbiology , Polygalacturonase , Triticum/genetics , Triticum/microbiology
8.
Planta ; 224(3): 633-45, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16501991

ABSTRACT

Polygalacturonase-inhibiting proteins (PGIPs) are leucine-rich repeat (LRR) proteins that inhibit fungal endopolygalacturonases (PGs). They are encoded by multigene families whose members show functional redundancy and subfunctionalization for recognition of fungal PGs. In order to expand the information on the structure and functional features of legume PGIP, we have isolated and characterized four members of the soybean Pgip gene family and determined the properties of the encoded protein products. Sequence analysis showed that these genes form two clusters: one cluster of about 5 kbp containing Gmpgip1 and Gmpgip2, and the other containing Gmpgip3 and Gmpgip4 within a 60 kb fragment of a separate BAC clone. Sequence diversification of the four members resides mainly in the xxLxLxx region that includes residues forming the beta-sheet B1. When compared with other legume Pgip genes, Gmpgip3 groups with the bean genes Pvpgip1 and Pvpgip2, suggesting that these genes are closer to the ancestral gene. At the protein level, only GmPGIP3 shows the capability to inhibit fungal PGs. The spectrum of inhibition of GmPGIP3 against eight different fungal PGs mirrors that of the PGIP purified from soybean tissues and is similar to that of the bean PvPGIP2, one of the most efficient inhibitors so far characterized. We also report that the four Gmpgip genes are differentially regulated after wounding or during infection with the fungal pathogen Sclerotinia sclerotiorum. Following fungal infection Gmpgip3 is up regulated promptly, while Gmpgip2 is delayed.


Subject(s)
Glycine max/metabolism , Multigene Family/physiology , Plant Proteins/metabolism , Amino Acid Sequence , Cloning, Molecular , Fungal Proteins/metabolism , Fungi/metabolism , Fungi/physiology , Genetic Variation , Molecular Sequence Data , Plant Proteins/chemistry , Plant Proteins/genetics , Polygalacturonase/metabolism , Sequence Alignment , Sequence Analysis, DNA , Sequence Analysis, Protein , Glycine max/genetics , Glycine max/microbiology
9.
Lett Appl Microbiol ; 38(3): 233-8, 2004.
Article in English | MEDLINE | ID: mdl-14962046

ABSTRACT

AIMS: Isolation and characterization of the glucose oxidase (GOX)-encoding gene from a Penicillium variabile strain (P16) having a high level of GOX activity and comparison of its expression with that of another strain of P. variabile (NRRL 1048) characterized by low GOX activity. METHODS AND RESULTS: The gene, isolated by PCR consisted of 1818 bp encoding 605 amino acid residues. Gene expression was analysed by Northern blotting and compared with that of P. variabile NRRL 1048. The higher GOX activity of strain P16 appeared likely because of de novo mRNA synthesis. Southern blotting analyses of the genomic DNA showed that the hybridization pattern of the two strains differed for the size of hybridizing fragment detected by the probe and slightly for their signal intensity. CONCLUSIONS: The GOX-encoding gene of P. variabile P16 was isolated and characterized to identify the molecular bases of its high level of expression and in view of improving enzyme production by developing a process based on heterologous expression. SIGNIFICANCE AND IMPACT OF THE STUDY: GOX-encoding genes can be subjected to high difference in their expression levels. The P16 strain of P. variable producing large amount of GOX as well as its encoding gene might be exploited for industrial applications.


Subject(s)
Glucose Oxidase/biosynthesis , Glucose Oxidase/genetics , Penicillium/enzymology , Penicillium/genetics , Amino Acid Sequence , Blotting, Northern , Blotting, Southern , Chromosomes, Fungal/genetics , Cloning, Molecular , DNA, Fungal/chemistry , DNA, Fungal/isolation & purification , Gene Expression , Genes, Fungal , Genome, Fungal , Glucose Oxidase/metabolism , Molecular Sequence Data , Polymorphism, Genetic , RNA, Messenger/analysis , Sequence Alignment , Sequence Analysis, DNA , Time Factors
10.
Theor Appl Genet ; 108(3): 468-76, 2004 Feb.
Article in English | MEDLINE | ID: mdl-14574453

ABSTRACT

The low-molecular-weight (LMW) glutenin subunits are components of the highly cross-linked glutenin polymers that confer viscoelastic properties to gluten and dough. They have both quantitative and qualitative effects on dough quality that may relate to differences in their ability to form the inter-chain disulphide bonds that stabilise the polymers. In order to determine the relationship between dough quality and the amounts and properties of the LMW subunits, we have transformed the pasta wheat cultivars Svevo and Ofanto with three genes encoding proteins, which differ in their numbers or positions of cysteine residues. The transgenes were delivered under control of the high-molecular-weight (HMW) subunit 1Dx5 gene promoter and terminator regions, and the encoded proteins were C-terminally tagged by the introduction of the c-myc epitope. Stable transformants were obtained with both cultivars, and the use of a specific antibody to the c-myc epitope tag allowed the transgene products to be readily detected in the complex mixture of LMW subunits. A range of transgene expression levels was observed. The addition of the epitope tag did not compromise the correct folding of the trangenic subunits and their incorporation into the glutenin polymers. Our results demonstrate that the ability to specifically epitope-tag LMW glutenin transgenes can greatly assist in the elucidation of their individual contributions to the functionality of the complex gluten system.


Subject(s)
Gene Expression , Glutens/analogs & derivatives , Glutens/genetics , Plants, Genetically Modified/genetics , Plasmids/genetics , Triticum/genetics , Blotting, Southern , Chromatography, High Pressure Liquid , Electrophoresis, Polyacrylamide Gel , Genes, myc/genetics , Glutens/metabolism , Polymers/metabolism , Transformation, Genetic , Transgenes/genetics
11.
Genome ; 46(3): 478-89, 2003 Jun.
Article in English | MEDLINE | ID: mdl-12834066

ABSTRACT

Three S genome specific sequences were isolated from Aegilops sect. sitopsis species using different experimental approaches. Two clones, UTV86 and UTV39, were isolated from a partial genomic library obtained from DNA of Aegilops sharonensis, whereas a third clone, UTV5, was isolated from Aegilops speltoides. The three clones were characterized by sequencing, analysis of methylation, and sequence organization and abundance in some Aegilops and Triticum species. The clones UTV39 and UTV5 belong to the same family of tandem repeated sequences and showed high homology with a sequence already present in nucleotide databases. The UTV86 clone from Ae. sharonensis corresponded to an interspersed low frequency repeated sequence and did not show any significant homology with reported sequences. Southern hybridization experiments, using the cloned sequences as probes, detected polymorphism in the restriction patterns of all the five Aegilops species in section sitopsis. Aegilops speltoides showed the most divergent hybridization pattern. A close relationship was detected between the S genome of Ae. speltoides and the G genome of the wild Triticum timopheevii. In situ hybridization revealed a telomeric and (or) subtelomeric location of the sequences UTV39 and UTV5.


Subject(s)
Poaceae/genetics , Tandem Repeat Sequences/genetics , Base Sequence , Blotting, Southern , Chromosome Mapping , DNA Methylation , In Situ Hybridization, Fluorescence , Molecular Sequence Data , Sequence Analysis, DNA , Triticum/genetics
12.
J Chromatogr B Analyt Technol Biomed Life Sci ; 786(1-2): 215-20, 2003 Mar 25.
Article in English | MEDLINE | ID: mdl-12651017

ABSTRACT

Wheat technological properties are correlated with the size of glutenin polymers, consisting of high and low molecular mass glutenin subunits, linked together by disulphide bonds. In order to unravel glutenin polymer structure, we considered three LMW-GS genes, which differ in the number of cysteine residues and in the repetitive domain length. The three LMW-GS genes have been expressed in Escherichia coli, and purified with a yield of 40-100 mg/l of culture volume, depending on protein type. Single polypeptides are being used in re-oxidation and micro-mixographic experiments, in order to detect the influence of the differential structural characteristics on glutenin polymer formation.


Subject(s)
Glutens/analogs & derivatives , Glutens/genetics , Glutens/isolation & purification , Triticum/chemistry , Base Sequence , Blotting, Western , DNA Primers , Electrophoresis, Polyacrylamide Gel , Glutens/chemistry , Molecular Weight , Mutation , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification
13.
Theor Appl Genet ; 106(4): 744-50, 2003 Feb.
Article in English | MEDLINE | ID: mdl-12596005

ABSTRACT

The gene encoding high-molecular-weight (HMW) subunit 1Bx20 was isolated from durum wheat cv. Lira. It encodes a mature protein of 774 amino acid residues with an M(r) of 83,913. Comparison with the sequence of subunit 1Bx7 showed over 96% identity, the main difference being the substitution of two cysteine residues in the N-terminal domain of subunit 1Bx7 with tyrosine residues in 1Bx20. Comparison of the structures and stabilities of the two subunits purified from wheat using Fourier-transform infra-red and circular dichroism spectroscopy showed no significant differences. However, incorporation of subunit 1Bx7 into a base flour gave increased dough strength and stability measured by Mixograph analysis, while incorporation of subunit 1Bx20 resulted in small positive or negative effects on the parameters measured. It is concluded that the different effects of the two subunits could relate to the differences in their cysteine contents, thereby affecting the cross-linking and hence properties of the glutenin polymers.


Subject(s)
Glutens/analogs & derivatives , Triticum/genetics , Amino Acid Sequence , Circular Dichroism , Crosses, Genetic , Cysteine/chemistry , Electrophoresis, Polyacrylamide Gel , Glutens/chemistry , Molecular Sequence Data , Molecular Weight , Protein Structure, Tertiary , Sequence Homology, Amino Acid , Spectroscopy, Fourier Transform Infrared , Tyrosine/metabolism
15.
Annu Rev Phytopathol ; 39: 313-35, 2001.
Article in English | MEDLINE | ID: mdl-11701868

ABSTRACT

Polygalacturonase-inhibiting proteins (PGIPs) are extracellular plant proteins capable of inhibiting fungal endopolygalacturonases (PGs). Plants have evolved different PGIPs with specific recognition abilities against the many PGs produced by fungi. The genes encoding PGIPs are organized into families, and different members of each family may encode proteins with nearly identical characteristics but different specificities and regulation. PGIPs are typically induced by pathogen infection and stress-related signals. The recognition ability of PGIPs resides in their LRR (leucine-rich repeat) structure, where solvent-exposed residues in the beta-strand/beta-turn motifs of the LRRs are determinants of specificity. Manipulation of the primary structure of PGIPs is expected to generate more efficient PGIPs with novel recognition specificities to protect crop plants against pathogens.


Subject(s)
Fungi/growth & development , Magnoliopsida/genetics , Plant Diseases/genetics , Plant Proteins/genetics , Amino Acid Sequence , Cell Wall , Fungi/pathogenicity , Gene Expression Regulation, Plant , Immunity, Innate/genetics , Leucine-Rich Repeat Proteins , Magnoliopsida/enzymology , Magnoliopsida/microbiology , Molecular Sequence Data , Plant Diseases/microbiology , Plant Proteins/metabolism , Polygalacturonase/metabolism , Proteins/genetics , Proteins/physiology , Sequence Homology, Amino Acid , Signal Transduction
16.
Plant Physiol ; 118(4): 1147-58, 1998 Dec.
Article in English | MEDLINE | ID: mdl-9847089

ABSTRACT

Both high- and low-molecular-weight glutenin subunits (LMW-GS) play the major role in determining the viscoelastic properties of wheat (Triticum aestivum L.) flour. To date there has been no clear correspondence between the amino acid sequences of LMW-GS derived from DNA sequencing and those of actual LMW-GS present in the endosperm. We have characterized a particular LMW-GS from hexaploid bread wheat, a major component of the glutenin polymer, which we call the 42K LMW-GS, and have isolated and sequenced the putative corresponding gene. Extensive amino acid sequences obtained directly for this 42K LMW-GS indicate correspondence between this protein and the putative corresponding gene. This subunit did not show a cysteine (Cys) at position 5, in contrast to what has frequently been reported for nucleotide-based sequences of LMW-GS. This Cys has been replaced by one occurring in the repeated-sequence domain, leaving the total number of Cys residues in the molecule the same as in various other LMW-GS. On the basis of the deduced amino acid sequence and literature-based assignment of disulfide linkages, a computer-generated molecular model of the 42K subunit was constructed.


Subject(s)
Glutens/analogs & derivatives , Triticum/chemistry , Triticum/genetics , Amino Acid Sequence , Biopolymers/chemistry , Cloning, Molecular , Computer Simulation , Flour/analysis , Glutens/chemistry , Glutens/genetics , Models, Molecular , Molecular Sequence Data , Molecular Weight , Peptide Fragments/chemistry , Peptide Fragments/genetics , Polymerase Chain Reaction , Protein Conformation
17.
FEBS Lett ; 437(3): 177-82, 1998 Oct 23.
Article in English | MEDLINE | ID: mdl-9824285

ABSTRACT

A chickpea cDNA encoding a cell wall copper amine oxidase (CuAO) was cloned and characterised. The 2010 bp open reading frame encodes a protein of 76.5 kDa which shares significant primary structure homology with other known CuAOs. Southern blot analysis indicates that in chickpea CuAO is encoded by a single gene or a small gene family. This cDNA was essential for studying the role of CuAO during seedling development and wound healing in chickpea seedlings. CuAO transcript level and activity were modulated during seedling development in parallel with cell maturation. Moreover, mechanical wounding induced a rapid increase of CuAO mRNA accumulation and enzyme activity which remained high during the wound-healing process. Aminoguanidine, a specific CuAO inhibitor, decreased the deposition of lignin-suberin barrier along the lesion. CuAO may be a limiting factor in H2O2 production in the cell wall of chickpea seedlings and its expression seems to integrate with the remodelling of plant cell wall occurring during ontogenesis and wound healing.


Subject(s)
Amine Oxidase (Copper-Containing)/genetics , Cell Wall/enzymology , Gene Expression Regulation, Developmental , Gene Expression Regulation, Plant , Plants/genetics , Amine Oxidase (Copper-Containing)/metabolism , Amino Acid Sequence , Base Sequence , Cell Wall/genetics , Cloning, Molecular , DNA, Complementary/analysis , DNA, Complementary/isolation & purification , Enzyme Activation/drug effects , Fabaceae , Guanidines/pharmacology , Lignin/metabolism , Lipids , Membrane Lipids/metabolism , Molecular Sequence Data , Plant Development , Plants/enzymology , Plants, Medicinal , RNA, Messenger/metabolism
18.
J Intern Med ; 243(1): 15-23, 1998 Jan.
Article in English | MEDLINE | ID: mdl-9487327

ABSTRACT

OBJECTIVES: We recently demonstrated the utility of a clinical model combined with ultrasonography to assist the diagnostic approach in patients with suspected deep-vein thrombosis (DVT). In this study we also sought to demonstrate that the model is useful with impedance plethysmography, a less accurate and less utilized diagnostic test. The original clinical model is slightly cumbersome to use; thus at the completion of the study we attempted to develop a simpler scoring system with a goal of maintaining accuracy. DESIGN: An open, nonrandomized, multicentre trial. SETTING: Three centres, two in Canada, and one in Italy. SUBJECTS: Ambulatory patients with suspected deep-vein thrombosis. INTERVENTIONS: All patients were assessed clinically to determine the probability for deep-vein thrombosis prior to performing impedance plethysmography and venography. We compared the accuracy of impedance plethysmography between the three pretest probability categories of high, moderate and low. All of the above were performed and interpreted by independent observers. When the study was completed, we revised the clinical model by first performing a simple regression analysis then a multiple logistic regression analysis; a scoring system was devised using the latter. RESULTS: Impedance plethysmography is significantly more sensitive and less specific for all DVT in patients with high pretest probability for deep-vein thrombosis (P = 0.001). The post- test probability (positive predictive value) for deep-vein thrombosis with an abnormal impedance plethysmography result was significantly different (P = 0.0001) between the three pretest probability categories. Multiple regression analysis has provided a new model with only nine variables and a simple scoring system. The retrospective application of the revised clinical model, which is simpler to use, suggests it will provide similar results as the original clinical model when combined with impedance plethysmography. The combination of impedance plethysmography and the clinical model suggests patients are likely to have false positive results if they have a low or moderate pretest probability for deep-vein thrombosis and false negative results if the pretest probability is high. The combination of a low pretest probability and a normal impedance plethysmography result may exclude the need for serial testing, and represented more than 50% of our patient population. CONCLUSIONS: The use of the clinical model in conjunction with impedance plethysmography would decrease the number of false positive and negative diagnoses and could markedly decrease the need for serial impedance plethysmography. Combining the clinical model with impedance plethysmography could overcome the fact that impedance plethysmography is clearly less accurate than venous ultrasound imaging. The use of the revised clinical model may increase acceptability and utility, but prospective testing is required before widespread use.


Subject(s)
Plethysmography, Impedance , Thrombophlebitis/diagnosis , Diagnosis, Differential , Humans , Logistic Models , Multivariate Analysis , Odds Ratio , Prospective Studies , Sensitivity and Specificity
19.
Theor Appl Genet ; 93(7): 1048-53, 1996 Nov.
Article in English | MEDLINE | ID: mdl-24162479

ABSTRACT

High-molecular-weight (HMW) glutenin subunits are a particular class of wheat endosperm proteins containing a large repetitive domain flanked by two short N- and C-terminal non-repetitive regions. Deletions and insertions within the central repetitive domain has been suggested to be mainly responsible for the length variations observed for this class of proteins. Nucleotide sequence comparison of a number of HMW glutenin genes allowed the identification of small insertions or deletions within the repetitive domain. However, only indirect evidence has been produced which suggests the occurrence of substantial insertions or deletions within this region when a large variation in molecular size is present between different HMW glutenin subunits. This paper represents the first report on the molecular characterization of an unusually large insertion within the repetitive domain of a functional HMW glutenin gene. This gene is located at the Glu-D1 locus of a hexaploid wheat genotype and contains an insertion of 561 base pairs that codes for 187 amino acids corresponding to the repetitive domain of a HMW glutenin subunit encoded at the same locus. The precise location of the insertion has been identified and the molecular processes underlying such mutational events are discussed.

20.
Genome ; 38(6): 1255-61, 1995 Dec.
Article in English | MEDLINE | ID: mdl-8654919

ABSTRACT

Tandemly repeated DNA sequences about 60 bp in length, which may be isolated by digestion with FokI restriction endonuclease, were studied by means of molecular and cytological hybridization in Vicia faba and other Vicia species. The results obtained can be summarized as follows: (i) FokI repeats are almost species specific to V. faba, since they hybridize to a minimum extent to genomic DNA of only two out of five related species; (ii) these tandemly repeated elements display variability in structure even within one and the same array, where different repeats may share not more than 71% homology; (iii) their redundancy in the genome of V. faba is remarkably high and varies largely between land races (copy numbers per haploid, 1C, genome range from 21.51 x 10(6) to 5.39 x 10(6)); (iv) FokI repeats are clustered in differing amounts in each subtelocentric pair of the chromosome complement and are missing or present in a nondetectable amount in the submetacentric pair; (vi) chromosome regions that bear these repeats associate closely to varying degrees in interphase nuclei. These results are discussed in relation to possible functional roles that tandemly repeated DNA sequences such as the FokI elements might play.


Subject(s)
Chromosome Mapping , Fabaceae/genetics , Genome, Plant , Plants, Medicinal , Repetitive Sequences, Nucleic Acid/genetics , Base Sequence , Cloning, Molecular , DNA, Plant/genetics , DNA, Plant/isolation & purification , Deoxyribonucleases, Type II Site-Specific , Gene Dosage , In Situ Hybridization , Interphase , Metaphase , Molecular Sequence Data , Plant Roots , Sequence Analysis, DNA , Sequence Homology, Nucleic Acid , Species Specificity
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