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Genet Mol Res ; 13(4): 9795-805, 2014 Nov 27.
Article in English | MEDLINE | ID: mdl-25501189

ABSTRACT

Drought and rice blast disease caused by Magnaporthe oryzae are two of the most serious threats to global rice production. To explore the mechanisms underlying gene expression induced in rice by stresses, studies involving transcriptome analyses have been conducted over the past few years. Thus, it is crucial to have a reliable set of reference genes to normalize the expression levels of rice genes affected by different stresses. To identify potential reference genes for studies of the differential expression of target genes in rice under M. oryzae infection and drought conditions, the present study evaluated five housekeeping genes for the normalization of gene expression. The stability of the expression of these genes was assessed using the analytical software packages geNorm and NormFinder. For all samples analyzed, the stability rank was UBQ5 > GAPDH > eIF-4α> ß-TUB > 18S rRNA. The data showed that the UBQ5, GAPDH, and eIF-4αgenes are appropriate, high-performing reference genes and will be highly useful in future expression studies of fungal infections and drought in rice.


Subject(s)
Gene Expression Regulation, Plant , Genes, Essential , Genes, Plant , Oryza/genetics , Real-Time Polymerase Chain Reaction/standards , Droughts , Eukaryotic Initiation Factor-4A/genetics , Glyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)/genetics , Magnaporthe/pathogenicity , Magnaporthe/physiology , Oryza/microbiology , Plant Diseases/genetics , Plant Diseases/microbiology , Reference Standards , Stress, Physiological , Transcriptome , Ubiquitin/genetics
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