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Proteins ; 88(1): 242-246, 2020 01.
Article in English | MEDLINE | ID: mdl-31294889

ABSTRACT

Pisum sativum defensin 2 (Psd2) is a small (4.7 kDa) antifungal peptide whose structure is held together by four conserved disulfide bridges. Psd2 shares the cysteine-stabilized alpha-beta (CSαß) fold, which lacks a regular hydrophobic core. All hydrophobic residues are exposed to the surface, except for leucine 6. They are clustered in the surface formed by two loops, between ß1 and α-helix and ß2 and ß3 sheets. The observation of surface hydrophobic clusters reveals a remarkable evolution of the CSαß fold to expose and reorganize hydrophobic residues, which facilitates creating versatile binding sites.


Subject(s)
Defensins/chemistry , Pisum sativum/chemistry , Plant Proteins/chemistry , Hydrophobic and Hydrophilic Interactions , Models, Molecular , Nuclear Magnetic Resonance, Biomolecular , Protein Conformation , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Protein Folding
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