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1.
J Chem Phys ; 151(16): 164122, 2019 Oct 28.
Article in English | MEDLINE | ID: mdl-31675879

ABSTRACT

Various effects of electron correlation accompany molecular bond dissociation, which makes the efficient calculation of potential energy curves a notoriously difficult problem. In an attempt to reliably reproduce both absolute energies and shapes of the benchmark dissociation curves, calculations with the combined CASΠDFT method are carried out for the prototype molecules H2, BH, F2, and N2. The complete active space (CAS) part of CASΠDFT accounts for long-range nondynamic correlation, while short-range dynamic correlation is accounted for with the corrected Lee-Yang-Parr correlation functional of density functional theory (DFT). The correction represents the suppression of dynamic correlation with nondynamic correlation, and it is a function of the ratio x(r) between the conditional and conventional densities obtained with the CAS on-top pair density Π(r). For the single-bonded molecules H2, BH, and F2, CASΠDFT succeeds in reproducing the shapes and absolute energies (for H2 and BH) of the benchmark curves, while for the triple-bonded N2 molecule, the addition to CASΠDFT of a multibond correction is required. It accounts for the middle-range dynamic correlation of the same-spin electrons in the (symmetrized) high-spin atomic electron configurations of the dissociating N2.

2.
J Org Chem ; 74(14): 4982-91, 2009 Jul 17.
Article in English | MEDLINE | ID: mdl-19489535

ABSTRACT

The stereodirecting effect of the glycosyl C-5 substituent has been investigated in a series of d-pyranosyl thioglycoside donors and related to their preferred positions in the intermediate (3)H(4) and (4)H(3) half-chair oxacarbenium ions. Computational studies showed that an axially positioned C-5 carboxylate ester can stabilize the (3)H(4) half-chair oxacarbenium ion conformer by donating electron density from its carbonyl function into the electron-poor oxacarbenium ion functionality. A similar stabilization can be achieved by a C-5 benzyloxymethyl group, but the magnitude of this stabilization is significantly smaller than for the C-5 carboxylate ester. As a result, the preference of the C-5 benzyloxymethyl to occupy an axial position in the half-chair oxacarbenium ions is much reduced compared to the C-5 carboxylate ester. To minimize steric interactions, a C-5 methyl group prefers to adopt an equatorial position and therefore favors the (4)H(3) half-chair oxacarbenium ion. When all pyranosyl substituents occupy their favored position in one of the two intermediate half-chair oxacarbenium ions, highly stereoselective glycosylations can be achieved as revealed by the excellent beta-selectivity of mannuronate esters and alpha-selectivity of 6-deoxygulosides.


Subject(s)
Pyrans/chemistry , Computer Simulation , Glycosylation , Molecular Structure , Stereoisomerism , Thermodynamics , Thioglycosides/chemistry
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