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1.
Genesis ; 58(9): e23387, 2020 09.
Article in English | MEDLINE | ID: mdl-32643876

ABSTRACT

Wnt signal transduction controls tissue morphogenesis, maintenance and regeneration in all multicellular animals. In mammals, the WNT/CTNNB1 (Wnt/ß-catenin) pathway controls cell proliferation and cell fate decisions before and after birth. It plays a critical role at multiple stages of embryonic development, but also governs stem cell maintenance and homeostasis in adult tissues. However, it remains challenging to monitor endogenous WNT/CTNNB1 signaling dynamics in vivo. Here, we report the generation and characterization of a new knock-in mouse strain that doubles as a fluorescent reporter and lineage tracing driver for WNT/CTNNB1 responsive cells. We introduced a multi-cistronic targeting cassette at the 3' end of the universal WNT/CTNNB1 target gene Axin2. The resulting knock-in allele expresses a bright fluorescent reporter (3xNLS-SGFP2) and a doxycycline-inducible driver for lineage tracing (rtTA3). We show that the Axin2P2A-rtTA3-T2A-3xNLS-SGFP2 strain labels WNT/CTNNB1 responsive cells at multiple anatomical sites during different stages of embryonic and postnatal development. It faithfully reports the subtle and dynamic changes in physiological WNT/CTNNB1 signaling activity that occur in vivo. We expect this mouse strain to be a useful resource for biologists who want to track and trace the location and developmental fate of WNT/CTNNB1 responsive stem cells in different contexts.


Subject(s)
Axin Protein/genetics , Cell Lineage , Gene Targeting/methods , Wnt Signaling Pathway , Animals , Axin Protein/metabolism , Cells, Cultured , Female , Genes, Reporter , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Male , Mice , Mice, Inbred C57BL , beta Catenin/metabolism
2.
J Mammary Gland Biol Neoplasia ; 25(4): 319-335, 2020 12.
Article in English | MEDLINE | ID: mdl-33625717

ABSTRACT

An increasing number of '-omics' datasets, generated by labs all across the world, are becoming available. They contain a wealth of data that are largely unexplored. Not every scientist, however, will have access to the required resources and expertise to analyze such data from scratch. Fortunately, a growing number of investigators is dedicating their time and effort to the development of user friendly, online applications that allow researchers to use and investigate these datasets. Here, we will illustrate the usefulness of such an approach. Using regulation of Wnt7b expression as an example, we will highlight a selection of accessible tools and resources that are available to researchers in the area of mammary gland biology. We show how they can be used for in silico analyses of gene regulatory mechanisms, resulting in new hypotheses and providing leads for experimental follow up. We also call out to the mammary gland community to join forces in a coordinated effort to generate and share additional tissue-specific '-omics' datasets and thereby expand the in silico toolbox.


Subject(s)
Breast Neoplasms/genetics , Computational Biology/methods , Mammary Glands, Human/pathology , Proto-Oncogene Proteins/genetics , Wnt Proteins/genetics , Animals , Breast Neoplasms/pathology , Databases, Genetic , Datasets as Topic , Feasibility Studies , Female , Gene Expression Regulation, Neoplastic , Humans , Internet , Mammary Glands, Human/growth & development , Mice , Proto-Oncogene Proteins/metabolism , RNA-Seq , Single-Cell Analysis , Spatio-Temporal Analysis , Wnt Proteins/metabolism , Wnt Signaling Pathway/genetics
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