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1.
Dokl Biol Sci ; 507(1): 416-427, 2022 Dec.
Article in English | MEDLINE | ID: mdl-36781537

ABSTRACT

The Fusarium solani species complex is a large group of soil saprotrophs with a broad adaptive potential, which allows the fungi to exist under various conditions and to parasitize on different hosts. The review analyzes the modern data concerning the genetic peculiarities of species from this complex by the example of F. solani f. sp. pisi and generalizes the data on the most widespread species pathogenic for both plants and humans. The enhanced resistance of the F. solani species complex to the most of modern antifungal agents and the need for novel therapeutic agents against fusariosis has been considered.


Subject(s)
Fusariosis , Fusarium , Humans , Virulence , Fusarium/genetics , Fusariosis/drug therapy , Fusariosis/microbiology , Antifungal Agents
2.
Vet Med Sci ; 7(5): 1593-1599, 2021 09.
Article in English | MEDLINE | ID: mdl-33955690

ABSTRACT

INTRODUCTION: Mastitis is an inflammation of the mammary gland that could either be clinical or subclinical, and can be caused by infectious agents. It has different aetiological pathogens such as Staphylococcus aureus, Streptococcus agalactiae, Escherichia coli that pose different economic and health impacts. In Ethiopia, previous studies on mastitis have been focused on semi-intensive and intensive dairy production system. The objectives of this study were therefore to estimate prevalence, aetiology of causative pathogens and identify different risk factors of mastitis in extensive management systems. A total of 532 lactating cows were randomly selected for a cross-sectional study carried out in four districts of west Wollega, western Oromia, Ethiopia. RESULT: Based on the clinical examination and California mastitis test, 39.67% overall prevalence of mastitis on cow level was recorded. Of them, 16.70% and 22.70% were clinical and subclinical mastitis, respectively. Among 2,128 quarters examined 210 were blind teats. The associated risk factors age ≥8 years (16.35%), parity 1-3 calving (27.63%), milk yield 1-2 litres (21.98%), lactation stage <4 months (18.04%) and tick infestation (26.70%) were significantly associated in the occurrence of mastitis. Staphylococcus spp. (15.60%) were the dominant bacteria isolated from collected mastitic milk. CONCLUSION: Mastitis is an important disease for dairy cows kept under an extensive management system. Its occurrence is determined by risk factors like age, parity, milk yield, lactation stage and tick infestation. This study is indicated Staphylococcus species as the major bacteria isolated from mastitic milk. This study warrants further study on the prevalence, aetiology, economic impact and potential risk factors of mastitis in dairy cows kept in extensive production system.


Subject(s)
Cattle Diseases , Mastitis, Bovine , Animals , Cattle , Cross-Sectional Studies , Ethiopia/epidemiology , Female , Lactation , Mastitis, Bovine/etiology , Mastitis, Bovine/microbiology , Pregnancy , Prevalence , Risk Factors
3.
J Hepatol ; 75(1): 86-97, 2021 07.
Article in English | MEDLINE | ID: mdl-33539847

ABSTRACT

BACKGROUND & AIMS: Prospective drug-induced liver injury (DILI) registries are important sources of information on idiosyncratic DILI. We aimed to present a comprehensive analysis of 843 patients with DILI enrolled into the Spanish DILI Registry over a 20-year time period. METHODS: Cases were identified, diagnosed and followed prospectively. Clinical features, drug information and outcome data were collected. RESULTS: A total of 843 patients, with a mean age of 54 years (48% females), were enrolled up to 2018. Hepatocellular injury was associated with younger age (adjusted odds ratio [aOR] per year 0.983; 95% CI 0.974-0.991) and lower platelet count (aOR per unit 0.996; 95% CI 0.994-0.998). Anti-infectives were the most common causative drug class (40%). Liver-related mortality was more frequent in patients with hepatocellular damage aged ≥65 years (p = 0.0083) and in patients with underlying liver disease (p = 0.0221). Independent predictors of liver-related death/transplantation included nR-based hepatocellular injury, female sex, higher onset aspartate aminotransferase (AST) and bilirubin values. nR-based hepatocellular injury was not associated with 6-month overall mortality, for which comorbidity burden played a more important role. The prognostic capacity of Hy's law varied between causative agents. Empirical therapy (corticosteroids, ursodeoxycholic acid and MARS) was prescribed to 20% of patients. Drug-induced autoimmune hepatitis patients (26 cases) were mainly females (62%) with hepatocellular damage (92%), who more frequently received immunosuppressive therapy (58%). CONCLUSIONS: AST elevation at onset is a strong predictor of poor outcome and should be routinely assessed in DILI evaluation. Mortality is higher in older patients with hepatocellular damage and patients with underlying hepatic conditions. The Spanish DILI Registry is a valuable tool in the identification of causative drugs, clinical signatures and prognostic risk factors in DILI and can aid physicians in DILI characterisation and management. LAY SUMMARY: Clinical information on drug-induced liver injury (DILI) collected from enrolled patients in the Spanish DILI Registry can guide physicians in the decision-making process. We have found that older patients with hepatocellular type liver injury and patients with additional liver conditions are at a higher risk of mortality. The type of liver injury, patient sex and analytical values of aspartate aminotransferase and total bilirubin can also help predict clinical outcomes.


Subject(s)
Anti-Infective Agents , Aspartate Aminotransferases/analysis , Chemical and Drug Induced Liver Injury , Risk Assessment/methods , Age Factors , Anti-Infective Agents/pharmacology , Anti-Infective Agents/toxicity , Chemical and Drug Induced Liver Injury/diagnosis , Chemical and Drug Induced Liver Injury/epidemiology , Chemical and Drug Induced Liver Injury/etiology , Chemical and Drug Induced Liver Injury/therapy , Chronic Disease/epidemiology , Female , Humans , Liver Diseases/epidemiology , Liver Function Tests/methods , Liver Transplantation/statistics & numerical data , Male , Middle Aged , Mortality , Platelet Count/methods , Platelet Count/statistics & numerical data , Prognosis , Registries/statistics & numerical data , Risk Factors , Spain/epidemiology
4.
Infect Drug Resist ; 13: 2301-2309, 2020.
Article in English | MEDLINE | ID: mdl-32765006

ABSTRACT

PURPOSE: Aspergillosis is an important fungal disease affecting millions of individuals worldwide. The genus of Aspergillus consist of various complexes, causing a wide spectrum of diseases from superficial infections in immunocompetent hosts to life-threatening disseminated infections among immunocompromised patients. This study aimed to identify Aspergillus species by phenotypic (total isolates) and molecular tests (35 isolates), obtained from patients in Isfahan (the third-largest city of Iran) between 2010 and 2018, and determine the susceptibility of 35 clinical isolates to itraconazole (ITR), amphotericin-B (AMB), and voriconazole (VOR). PATIENTS AND METHODS: Based on clinical signs, a total of 2385 suspected cases were included in this retrospective study from January 2010 to December 2018. Direct microscopic examination with potassium hydroxide, sabouraud dextrose agar with chloramphenicol, and czapekdox agar media was applied to identify etiologic agents. Thirty-five Aspergillus species collected from January 2016 to December 2018 were identified by PCR-sequencing of ITS1-5.8SrDNA-ITS2 region, and their susceptibility to ITR, AMB, and VOR was determined using E-test. RESULTS: Based on direct microscopy and positive culture, 132 out of 2385 suspected cases had Aspergillus infection (5.5%). Fifty-four patients were male, and 78 patients were female. Patients in the age groups of 41-50 and 21-30 years had the highest and lowest frequencies, respectively. Aspergillus flavus/oryzae (n=54), A. fumigatus (n=24), A. niger (n=15), and A. terreus (n=12) were the most prevalent Aspergillus species, respectively. Among 35 Aspergillus species, the MIC ranges of AMB, ITR, and VOR for A. flavus/oryzae, A. niger, and A. terreus were (0.5-4 µg/mL; 0.5-16 µg/mL; 0.25-8 µg/mL), (1 µg/mL, 1 µg/mL, 1 µg/mL), and (4-4 µg/mL, 0.5-1 µg/mL, 0.5-1 µg/mL), respectively. CONCLUSION: Aspergillus infections have a wide spectrum of clinical manifestations and often occur in immunocompromised patients. Accurate identification at the species level is essential since the emergence of cryptic species is connected to different patterns of AFST that affect patient treatment outcomes. Azole-resistant Aspergillus spp. is a global concern, and the detection of the route of resistance is pivotal to prevent and control infection.

5.
Anaesthesia ; 75(11): 1469-1475, 2020 11.
Article in English | MEDLINE | ID: mdl-32463487

ABSTRACT

Anaphylaxis in pregnancy is a rare but severe complication for both mother and infant. Population-based data on anaphylaxis in pregnancy are lacking from mainland European countries. This multinational study presents the incidence, causative agents, management and maternal and infant outcomes of anaphylaxis in pregnancy. This descriptive multinational study used a combination of retrospective (Finnish medical registries) and prospective population-based studies (UK, France, Belgium and the Netherlands) to identify cases of anaphylaxis. Sixty-five cases were identified among 4,446,120 maternities (1.5 per 100,000 maternities; 95%CI 1.1-1.9). The incidence did not vary between countries. Approximately three-quarters of reactions occurred at the time of delivery. The most common causes were antibiotics in 27 women (43%), and anaesthetic agents in 11 women (17%; including neuromuscular blocking drugs, 7), which varied between countries. Anaphylaxis had very poor outcomes for one in seven mothers and one in seven babies; the maternal case fatality rate was 3.2% (95%CI 0.4-11.0) and the neonatal encephalopathy rate was 14.3% (95%CI 4.8-30.3). Across Europe, anaphylaxis related to pregnancy is rare despite having a multitude of causative agents and different antibiotic prophylaxis protocols.


Subject(s)
Anaphylaxis/epidemiology , Pregnancy Complications/epidemiology , Adult , Europe/epidemiology , Female , Humans , Incidence , Pregnancy , Prospective Studies , Retrospective Studies
6.
J Clin Med ; 9(4)2020 Apr 23.
Article in English | MEDLINE | ID: mdl-32340237

ABSTRACT

Cutaneous lymphoid hyperplasia (CLH) is a heterogeneous type of reactive lymphocytic infiltration resembling cutaneous lymphoma clinically and histopathologically. Few studies describe the relationship between the causative agents and histopathological and immunohistochemical characteristics of CLH. We investigated the clinical and histopathological characteristics of 50 patients with cutaneous CLH and analyzed them according to causative factors and predominant cell types (B or T cells). We retrospectively reviewed medical records to identify causative agents, and histopathological and immunohistochemical features. The majority of infiltrating lymphocytes were T cells (60%). T cell-dominant CLH showed papuloplaque lesions, whereas B cell-dominant CLH lesions were nodular. The infiltration pattern differed between T and B cells. In terms of prognosis, B-cell-predominant lesions tended to respond better to treatment than T-cell-predominant lesions. Hair dyes tended to be associated with multiple CLH lesions in older patients. CLH lesions associated with drugs were located on the head and neck. Insect bites were likely to cause a solitary papular lesion. Histopathologically, infiltration depth was located more superficially than other causes and featured intense eosinophilic infiltration. Thus, our study demonstrated that CLH presents different clinicopathological features according to causative agents and predominant lymphocytic types.

7.
J Vet Sci ; 20(6): e64, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31775191

ABSTRACT

Calf diarrhea caused by infectious agents is associated with economic losses in the cattle industry. The purpose of this study was to identify the causative agents and epidemiological characteristics of diarrhea in Korean native calves (KNC). In total, 207 diarrheal KNC aged less than 7 months were investigated. Fecal samples collected from the rectum were examined for causative agents using polymerase chain reaction (PCR) or real-time PCR and the number of oocysts were counted. Fourteen causative agents were detected from 164 of the 207 diarrheal KNC. Rotavirus was the most common agent (34.8%), followed by Eimeria spp. (31.7%), Escherichia coli (22.0%), Giardia spp. (14.0%), Clostridium difficile (9.8%), bovine viral diarrhea virus (8.5%), coronavirus (7.9%), Cryptosporidium spp. (7.3%), torovirus (6.7%), parvovirus (5.5%), norovirus (4.9%), kobuvirus (1.8%), adenovirus (1.2%), and Salmonella spp. (0.6%). About 95 (57.9%) of 164 calves were infected with a single causative agent and 42.1% were infected by multiple agents. No significant difference was observed in mortality between calves infected with a single agent and multiple agents. The occurrence of diarrhea caused by rotavirus, Eimeria spp., kobuvirus, and Giardia spp. was significantly different based on onset age, and the prevalence of diarrhea caused by rotavirus or C. difficile was significantly different between seasons. This study help the understanding of KNC diarrhea for the development of an effective strategy for disease prevention and control, especially in Eastern provinces of South Korea.


Subject(s)
Cattle Diseases/epidemiology , Diarrhea/veterinary , Animals , Cattle , Cattle Diseases/microbiology , Cattle Diseases/parasitology , Cattle Diseases/virology , Diarrhea/epidemiology , Diarrhea/microbiology , Diarrhea/parasitology , Feces/microbiology , Feces/parasitology , Feces/virology , Republic of Korea/epidemiology
8.
BMC Infect Dis ; 19(1): 850, 2019 Oct 15.
Article in English | MEDLINE | ID: mdl-31615449

ABSTRACT

BACKGROUND: To determine, from October 2010 to October 2018, the epidemiology of Deep Neck Infections (DNIs), regarding the detection, the identification and the susceptibility to antimicrobials of causative microorganisms, in Thessaly-Central Greece. METHODS: An analysis of data from a prospective database was conducted on 610 consecutive patients with DNIs treated in the Otolaryngology / Head & Neck Surgery Department of University Hospital of Larissa. Demographics, clinical features and microbiological data were analyzed. RESULTS: Among the 610 patients (1,9/1 male to female ratio, mean age: 39,24 ± 17,25) with DNIs, 579 had a single space (94,9%), while the remaining 31 had a multi-space (5,1%) DNI. The most common areas affected were the peritonsillar space (84,6%) followed by the submandibular space (6,5%). Clinical samples were obtained from 462 patients, and were tested by culture and by the application of 16S rRNA PCR. Two hundred fifty-five samples (55,2%) gave positive cultures, in which Streptococcus pyogenes and Staphylococcus aureus were predominant. The application of the 16S rRNA PCR revealed that 183 samples (39,6%) were positive for bacterial DNA; 22 of them, culture negative, were found to be positive for anaerobic (Fusobacterium necrophorum, Actinomyces israellii etc) and for fastidious microorganisms (Brucella mellitensis, Mycobacterium avium). CONCLUSION: DNIs represent a medical and surgical emergency and evidence-guided empirical treatment with intravenous infusion of antibiotics at the time of diagnosis is mandatory, highlighting the importance of epidemiological studies regarding the causative microorganisms. Although, in our study, the predominant pathogens were S. pyogenes and S. aureus, the combination of culture and molecular assay revealed that anaerobic bacteria play also a significant role in the pathogenesis of DNIs. Based on the local epidemiology, we propose as empirical therapy the intravenous use of a beta-lactam /beta-lactamase inhibitor; metronidazole or clindamycin can be added only in specific cases such as in immunocompromised patients.


Subject(s)
Anti-Infective Agents/pharmacology , Bacteremia/diagnosis , Bacteria/drug effects , Neck/microbiology , Abscess/diagnosis , Abscess/microbiology , Adult , Bacteremia/epidemiology , Bacteremia/microbiology , Bacteria/isolation & purification , Female , Greece/epidemiology , Humans , Male , Microbial Sensitivity Tests , Middle Aged , RNA, Ribosomal, 16S/metabolism , Retrospective Studies , Staphylococcus aureus/drug effects , Staphylococcus aureus/genetics , Staphylococcus aureus/isolation & purification , Streptococcus pyogenes/drug effects , Streptococcus pyogenes/genetics , Streptococcus pyogenes/isolation & purification
9.
Article in English | WPRIM (Western Pacific) | ID: wpr-758957

ABSTRACT

Calf diarrhea caused by infectious agents is associated with economic losses in the cattle industry. The purpose of this study was to identify the causative agents and epidemiological characteristics of diarrhea in Korean native calves (KNC). In total, 207 diarrheal KNC aged less than 7 months were investigated. Fecal samples collected from the rectum were examined for causative agents using polymerase chain reaction (PCR) or real-time PCR and the number of oocysts were counted. Fourteen causative agents were detected from 164 of the 207 diarrheal KNC. Rotavirus was the most common agent (34.8%), followed by Eimeria spp. (31.7%), Escherichia coli (22.0%), Giardia spp. (14.0%), Clostridium difficile (9.8%), bovine viral diarrhea virus (8.5%), coronavirus (7.9%), Cryptosporidium spp. (7.3%), torovirus (6.7%), parvovirus (5.5%), norovirus (4.9%), kobuvirus (1.8%), adenovirus (1.2%), and Salmonella spp. (0.6%). About 95 (57.9%) of 164 calves were infected with a single causative agent and 42.1% were infected by multiple agents. No significant difference was observed in mortality between calves infected with a single agent and multiple agents. The occurrence of diarrhea caused by rotavirus, Eimeria spp., kobuvirus, and Giardia spp. was significantly different based on onset age, and the prevalence of diarrhea caused by rotavirus or C. difficile was significantly different between seasons. This study help the understanding of KNC diarrhea for the development of an effective strategy for disease prevention and control, especially in Eastern provinces of South Korea.


Subject(s)
Animals , Cattle , Adenoviridae , Age of Onset , Clostridioides difficile , Coronavirus , Cryptosporidium , Diarrhea , Eimeria , Epidemiology , Escherichia coli , Giardia , Kobuvirus , Korea , Mortality , Norovirus , Oocysts , Parvovirus , Polymerase Chain Reaction , Prevalence , Real-Time Polymerase Chain Reaction , Rectum , Rotavirus , Salmonella , Seasons , Torovirus
10.
Sud Med Ekspert ; 61(4): 54-58, 2018.
Article in Russian | MEDLINE | ID: mdl-30168531

ABSTRACT

The objective of the present work was to study the specific approaches to the organization of the work of the foreign specialists performing post-mortem autopsies of the subjects who died from infectious pathology and consider the proposals of the representatives of the National Confidential Enquiry into Patient Outcome and Death (NCEPOD) concerning accreditation of mortuaries in the Great Britain. It is shown that the algorithm for the evaluation of the possible risks of contamination of the medical personnel suggests the solution of five problems that envisages obtaining the answers to the following questions: (1) what biological agents can be present in a particular case? (2) what is their virulence factor? (3) what are the transmission routes (mechanisms)? (4) what are the manner of their realization? (5) what is the amount of the pathogen(s) needed to cause a given infectious disease? The anti-infectious prophylactic measures and the prevention of the contamination risks for the medical personnel of the British mortuaries are designed to safeguard the people against the infection with the causative agents of tuberculosis, viral hepatitis B and C, HIV, and Kreutsfield- Jacob's disease. All the employees engaged in the pathological studies must wear specialized clothing in a mandatory manner and make use of the equipment for the personal and collective protection. An indispensable condition for the safe work in a mortuary is the efficient ventilation system, the special viewing equipment, and separate premises. The NCEPOD experts maintain that the general approach to the investigations of the cases of infectious diseases presently adopted in the country needs to be radically re-considered and standardized. Diagnostics of contamination and morbidity of the medical personnel from the corpses has not yet become a routine practice. The principal recommendation to be implemented at the national level consists of the strict observance of the safety precautions as opposed to the total pre-mortem testing of the suspicious cases.


Subject(s)
Coroners and Medical Examiners , Morgue , Occupational Exposure/prevention & control , Pathologists , Autopsy/standards , Humans , Safety Management/organization & administration , United Kingdom , Universal Precautions/methods
11.
J Mycol Med ; 28(1): 45-50, 2018 Mar.
Article in English | MEDLINE | ID: mdl-29449074

ABSTRACT

OBJECTIVE: Onychomycosis (OM) or fungal nail infection is one of the most common fungal infections, which is increasingly prevalent. OM is caused by dermatophytes spp, yeasts and non-dermatophyte moulds (NDMs). The purpose of this study was to identify and determine the prevalence rates, predisposing factors and causative agents of OM using clinical symptoms and microscopic morphometric findings. MATERIALS AND METHODS: In the present study, 180 patients suspected of OM were evaluated by direct microscopy using KOH 20%, culturing in Mycosel and Sabouraud dextrose agar media and Olysia software for identifying the causative fungi of OM. RESULTS: From 180 referred patients, 118 (65.56%) had OM, of whom 79 (66.94%) were positive for infection with dermatophytes spp. Of the 79 cases, the commonest age group was 61-70 years (21%) with males being 46 (58.23%) and females being 33 (41.77%). Both the fingernail and toenail infections were most prevalent in male patients. Sex, diabetes and age above 60 years were significant predisposing factors for OM development. DLSO was observed as the only clinical pattern of OM and T. rubrum was the commonest dermatophyte isolate (49.34%). CONCLUSION: This study showed that T. rubrum was the most common dermatophyte agent of OM in Iran.


Subject(s)
Arthrodermataceae/isolation & purification , Onychomycosis/diagnosis , Onychomycosis/epidemiology , Adolescent , Adult , Aged , Aged, 80 and over , Arthrodermataceae/ultrastructure , Causality , Diabetes Complications/microbiology , Female , Fungi/isolation & purification , Fungi/ultrastructure , Humans , Iran/epidemiology , Male , Middle Aged , Mycelium/ultrastructure , Onychomycosis/etiology , Onychomycosis/microbiology , Prevalence , Risk Factors , Yeasts/isolation & purification , Yeasts/ultrastructure , Young Adult
12.
J Hosp Infect ; 95(1): 105-111, 2017 Jan.
Article in English | MEDLINE | ID: mdl-28007308

ABSTRACT

BACKGROUND: Healthcare-associated infection (HCAI) represents a major problem for patient safety worldwide. AIM: To demonstrate the prevalence, causative agents, and risk factors for HCAI in Chinese hospitals. METHODS: A one-day point-prevalence survey was conducted in 52 Chinese hospitals between October 2014 and March 2015. A web-based software system was developed for data entry and management. FINDINGS: Among 53,939 patients surveyed, the prevalence of patients with at least one HCAI was 3.7%. Of 2182 HCAI episodes, the most frequently occurring types were lower respiratory tract infections (47.2%), followed by urinary tract infection (12.3%), upper respiratory tract infection (11.0%), and surgical site infection (6.2%). The prevalence of patients with at least one HCAI in critical care units was highest (17.1%). Device-associated infections, including ventilator-associated pneumonia, catheter-associated urinary tract infection, and central catheter-associated bloodstream infection, accounted for only 7.9% of all HCAIs. The most frequently isolated micro-organisms were Pseudomonas aeruginosa [206 infections (9.4%)], Acinetobacter baumannii [172 infections (7.9%)], Klebsiella pneumoniae [160 infections (7.3%)], and Escherichia coli [145 infections (6.6%)]. Of the survey patients (18,206/53,939), 33.8% were receiving at least one antimicrobial agent at the time of the survey. Risk factors for HCAI included older age (≥80 years), male gender, days of hospital admission, admission into a critical care unit, and device utilization. CONCLUSION: Our study suggests that the overall prevalence of HCAI in surveyed Chinese hospitals was lower than that reported from most European countries and the USA. More attention should be given to the surveillance and prevention of non-device-associated HCAI in China.


Subject(s)
Bacteria/isolation & purification , Bacterial Infections/epidemiology , Cross Infection/epidemiology , Adolescent , Adult , Aged , Aged, 80 and over , Bacteria/classification , Bacterial Infections/microbiology , Child , Child, Preschool , China/epidemiology , Cross Infection/microbiology , Electronic Data Processing , Female , Hospitals , Humans , Infant , Infant, Newborn , Male , Middle Aged , Prevalence , Surveys and Questionnaires , Young Adult
13.
J Clin Lab Anal ; 30(6): 1013-1020, 2016 Nov.
Article in English | MEDLINE | ID: mdl-27790797

ABSTRACT

BACKGROUND: Onychomycosis is principally caused by dermatophyte species, but nondermatophyte molds and yeasts have also been involved, causing different clinical manifestations. The aim of this investigation is to determine the clinicomycological and epidemiological profile of the etiologic agents of onychomycosis. METHODS: The study population included 9,785 suspected cases of onychomycosis referred to the Medical Mycology Reference Laboratory in Isfahan, Iran, during 2007-2014. Nail clipping was collected in sterile Petri dishes for direct microscopic examination and culture. Clinical isolates were identified by using phenotypic tests and molecular techniques. RESULTS: Of total 9,785 cases with clinical suspicion of onychomycosis comprised in the present study, 1,284 patients (13.1%) were positive by direct microscopy. Age range of patients was between 1 and 82 years. Housewives were the commonest infected population. Candida albicans was the most prevalent species isolated from patients in this study (34.9%) followed by Trichophyton interdigitale (11.7%) and Aspergillus flavus (9.1%). CONCLUSION: The pattern of causative agents and clinical signs of onychomycosis is altering region to region, so repeated epidemiological surveys of onychomycosis seems to be fundamental. The present study provides novel and appropriate epidemiologic data of onychomycosis for the better prevention and treatment of this fungal infection.


Subject(s)
Candida/pathogenicity , Foot Dermatoses/epidemiology , Foot Dermatoses/etiology , Onychomycosis/epidemiology , Onychomycosis/etiology , Adolescent , Adult , Aged , Aged, 80 and over , Antifungal Agents/therapeutic use , Candida/genetics , Child , Child, Preschool , Female , Foot Dermatoses/genetics , Humans , Infant , Iran , Longitudinal Studies , Male , Middle Aged , Onychomycosis/genetics , Prevalence , Young Adult
14.
Pak J Med Sci ; 32(4): 823-6, 2016.
Article in English | MEDLINE | ID: mdl-27648021

ABSTRACT

OBJECTIVE: The objectives were to assess the frequency of hospital acquired pneumonia (HAP) in patients admitted to intensive care unit (ICU) and to determine the frequencies of different etiological organisms in these patients. METHODS: This was descriptive cross sectional study, which was carried out in medical ICU of Shifa International Hospital Islamabad from January 2013 to January 2014. A total of 1866 patients were admitted in the department of medicine including medical ICU. They were evaluated for HAP and the causative organisms were cultured from these patients. Identification was carried out by standard biochemical profile of the organisms. RESULTS: The total number of patients admitted in medical ICU for any reason were 346. HAP was diagnosed in 88 patients (25.4%). The average age of patients admitted in Medical ICU with HAP was 48 years with the range of 16 to 82 years. 56 were male and 32 females. 42 patients (47.7%) died in medical ICU with HAP. Microbiological analysis showed that Pseudomonas aeruginosa were 27 (30.6%), Acinetobacter spp. were 12 (13.6%), Candida albicans were 12 (13.6%), Klebsiellapneumoniae were 9 (10.2%), Streptococcus spp. were 9 (10.2%), Escherichia coli were 5 (5.6%), Stenotrophomonas spp. were 4(4.5%), Methicillin Resistant Staphylococcus Aureus (MRSA) were 4 (4.5%) others organisms 6 (6.8%). CONCLUSION: The frequency of HAP in Medical ICU of our hospital is 88 out of 346 (25.4%). The commonest organism identified was Pseudomonas aeruginosa (30.6%) followed by Acinetobacter and Candida albican (13.6% each).

15.
Mater Sociomed ; 28(3): 201-4, 2016 Jun.
Article in English | MEDLINE | ID: mdl-27482162

ABSTRACT

INTRODUCTION: Reactive arthritis is an autoimmune condition which emerges as a counteraction towards an infection which has a focus elsewhere in the body. The purpose of this study is isolation of causative agents of reactive arthritis and ascertains the source of infection. The study has been carried out in the Rheumatology Clinic in Prishtina and specialized ambulance O.S. "Vendenisi-AL" in Besiana, whereas isolation of causative agents has been carried out in the National Institute for Public Health (NIPH). The study has prospective, comparative and analytical feature. RESULTS: Out of 100 patients, 66% were males and 34% females. Among males we have noticed domination of post-urethritis and post-streptococcic reactive arthritis, whereas among females dominates reactive arthritis of enteral etiology. The study concludes that: urogenital tract was the source of infection with 66% of cases, nasopharyngeal tract with 19% of cases, and enteral tract with 15% of cases respectively. Predominantly presents bacteria are E. Coli with 21%, Staphylococcus aureus with 20%, Streptococcus B. hem. gr. A with 16% of cases respectively and other species. CONCLUSION: frequency of arthritis with urogenital etiology was 2:1 in favor of males, with nasopharyngeal etiology 3:1 in favor of males, whereas in arthritis with enteral etiology we have noticed a slight dominance in favor of females.

16.
Pathog Dis ; 74(3)2016 Apr.
Article in English | MEDLINE | ID: mdl-26772653

ABSTRACT

Bovine mastitis (BM) is a disease with high incidence worldwide and one of the most relevant bovine pathologies and the most costly to the dairy industry. BM is an inflammation of the udder and represents one of the most difficult veterinary diseases to control. Biofilm formation is considered a selective advantage for pathogens causing mastitis, facilitating bacterial persistence in the udder. In fact, recently some authors drew attention to the biofilm formation ability presented by several mastitis causing pathogens and to its possible relation with recurrent mastitis infections and with the increased resistance to antimicrobial agents and host immune defence system. Actually, up to now, several researchers reported the potential role of cells in this mode of growth in the previous facts mentioned. As a consequence of the presence of biofilms, the infection here focused is more difficult to treat and eradicate, making this problem a more relevant pressing issue. Thus, we believe that a deeper knowledge of these structures in mastitis can help to determine the best control strategy to be used in veterinary practice in order to reduce losses in the dairy industry and to ensure milk safety and quality. The aim of this paper was to review the existing research and consequently to provide an overview of the role of biofilms in BM infections.


Subject(s)
Biofilms/growth & development , Cattle Diseases/microbiology , Mammary Glands, Animal/microbiology , Mastitis, Bovine/microbiology , Animals , Anti-Bacterial Agents/therapeutic use , Bacterial Adhesion/physiology , Cattle , Cattle Diseases/drug therapy , Cattle Diseases/pathology , Dairy Products , Drug Resistance, Bacterial , Enterococcus faecalis/pathogenicity , Escherichia coli/pathogenicity , Female , Mammary Glands, Animal/pathology , Mastitis, Bovine/drug therapy , Mastitis, Bovine/pathology , Staphylococcus/pathogenicity , Streptococcus/pathogenicity
17.
Int Wound J ; 10(4): 461-5, 2013 Aug.
Article in English | MEDLINE | ID: mdl-22747529

ABSTRACT

Necrotising fasciitis (NF) is a destructive invasive infection of skin, subcutaneous tissue and deep fascia. The aim of the study is to determine the causative agents of NF, its localisation, predisposing factors and comorbid conditions, duration of treatment and distribution of NF in different age groups and over the years. We conducted a retrospective study including 22 patients with NF from 2005 to 2010 in the University Clinical Center of Kosovo. The data were collected and analysed from the archives and protocols of the University Clinical Center of Kosovo. The average age of patients was 56·9 years. In eight cases or 36·4% of total patients studied, NF was caused by monobacterial agents with a predominance of Pseudomonas aeruginosa (five cases or 22·7% of total infections). Polybacterial agents were responsible for NF infection in other 14 cases (63·6%). Majority of the patients had other comorbidities like diabetes, trauma and prior history of surgical interventions. Diabetes was present in 17 patients or 77·3%. The remaining five patients (22·7%) had previous trauma and recent surgical intervention. Average length of treatment was 43 days. The hospital mortality rate in our case series was 22·6%. Early identification and diagnosis of NF significantly improves outcome and reduces mortality.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Fasciitis, Necrotizing/mortality , Fasciitis, Necrotizing/therapy , Skin Transplantation/methods , Adult , Aged , Cohort Studies , Combined Modality Therapy , Debridement/methods , Fasciitis, Necrotizing/microbiology , Female , Hospital Mortality/trends , Hospitals, University , Humans , Kosovo , Male , Middle Aged , Prognosis , Retrospective Studies , Risk Assessment , Severity of Illness Index , Survival Analysis , Treatment Outcome
18.
Braz. j. otorhinolaryngol. (Impr.) ; 75(5): 721-725, Sept.-Oct. 2009. tab
Article in English, Portuguese | LILACS | ID: lil-530097

ABSTRACT

AIM: To describe the bacterial and fungal organisms in otitis externa patients without other risk factors for fungal infections. STUDY DESIGN: Cross sectional cohort descriptive study. MATERIALS AND METHODS: Ear swabs were obtained from 362 patients aged 1 to 55 years old with clinically diagnosed otitis externa in Erzurum, Turkey, between January 2006 and April 2007, and cultured for aerobic and anaerobic bacteria and fungi, using EMB, 5 percent sheep's blood, chocolate agar, anaerobic blood agar plate, thioglycollate broth and sabaroud agar using standard microbiological technique to diagnose isolates. RESULTS: 219 cultures were positive and a total of 267 isolates were obtained. Of the isolates, 68.16 percent (n: 182) were aerobic or facultative bacteria, 1.12 percent (3) were anaerobic bacteria, 30.71 percent (82) were fungi and 17.5 percent (38) were polymicrobial infections. CONCLUSION: Fungal organisms especially Candida species may be isolated from ears of otitis externa patients without fungal infection risk factors such as ear self-cleaning, local antimicrobial, antifungal or corticosteroid drops or systemic antimicrobial or antifungal agents within the preceding week. Bacterial and fungal cultures may be recommended, and anti-fungal agents may be added, to treatment regimens in patients with otitis externa.


OBJETIVO: Descrever fungos e bactérias presentes em pacientes com otite externa sem fator de risco para infecções fúngicas. FORMA DE ESTUDO: Estudo descritivo de coorte transversal. MATERIAIS E MÉTODOS: Amostras por raspagem de cotonetes (swabs) no ouvido foram obtidas de 362 pacientes com idades entre 1 e 55 anos, com diagnóstico clínico de otite externa em Erzurum, Turquia, entre janeiro de 2006 e abril de 2007. Essas amostras foram cultivadas em meio de cultura, 5 por cento de sangue de ovelha, ágar chocolate, ágar sangue anaeróbio, banho em tioglicolato e ágar Saboroud, usando técnicas padrão de microbiologia para identificar os isolados. RESULTADOS: Obtivemos 219 culturas positivas e 267 isolados. Dos isolados, 68,16 por cento (n: 182) eram bactérias aeróbias ou facultativas, 1,12 por cento (3) eram bactérias anaeróbias, 30,71 por cento (82) eram fungos e 17.5 por cento (38) eram germes polimicrobianos. CONCLUSÃO: Fungos, especialmente espécies de Candida podem ser encontradas em ouvidos de pacientes com otite externa sem fatores de risco para infecção fúngica tais como autolimpeza do ouvido, uso de antimicrobiano local, corticosteroides ou antifúngicos tópicos ou agentes antibacterianos e antifúngicos sistêmicos na semana anterior. Culturas de bactérias e fungos podem ser recomendadas, e agentes antifúngicos podem ser acrescentados a esquemas de tratamento de pacientes com otite externa.


Subject(s)
Adolescent , Adult , Child , Child, Preschool , Female , Humans , Infant , Male , Middle Aged , Young Adult , Fungi/isolation & purification , Gram-Negative Bacteria/isolation & purification , Gram-Positive Bacteria/isolation & purification , Otitis Externa/microbiology , Cohort Studies , Cross-Sectional Studies , Fungi/classification , Gram-Negative Bacteria/classification , Gram-Positive Bacteria/classification , Turkey , Young Adult
19.
Rev. chil. ortop. traumatol ; 50(1): 17-23, 2009. graf, tab
Article in Spanish | LILACS | ID: lil-559461

ABSTRACT

Objective: To review the clinical presentation, the organisms responsible for arthritis and acute osteomyelitis and the intrahospitalary and ambulatorie management in childhood less than 16 years in the post Haemophilus influenza tipe B vaccine era. Methods: Retrospective review of clinic case account in the Hospital Clínico de la Pontificia Universidad Católica in the period from January 2004 to July 2008 with the diagnosis of acute infection oteomyelitis and septic arthritis. There were include all the cases, with or without surgical management and intra and extra hospitalary infection source. Results: There were 32 total cases, 22 acute osteomyelitis (AOM) and 16 septic arthritis (SA). Pain and functional impotence of lower limbs, were the 2 first sintoms. The agent was isolated in 25 percent of the SA and 54.5 percent of the AOM. The most frecuent isolated agent in AOM was the Staphilococcus aureus. In SA, there was no isolated this agent. Discussion: The clinical findings of the osteoarticular infections (OAI), presents with a loss florid illness than the classical presentation. To know the agent take time. For that reason, we thought that the empirical intravenosus antibiotical treatment is fundamental in this knew studies about this matter, that can propuose an universal empyric antibiotic therapy.


Objetivo: Revisar la presentación clínica, microorganismos responsables de artritis séptica (AS) y de osteomielitis aguda (OM), así como el manejo agudo y seguimiento en población pediátrica menor de 16 años en la era post vacuna anti Haemophilus influenzae tipo B (Hib). Métodos: Revisión retrospectiva de casos clínicos acontecidos en nuestro Hospital entre los años 2004 y 2008 con el diagnóstico de OM y AS de origen infeccioso. Se incluyeron todos los casos registrados, con o sin manejo quirúrgico, y con fuente infecciosa tanto intra como extra hospitalaria. Resultados: Se obtuvo ficha clínica completa en 38 casos, 22OMA y 16 AS. El dolor y la impotencia funcional de extremidades inferiores, fueron los principales motivos de consulta en ambos grupos. Se logró aislar el agente en un 25 por ciento de las AS y un 54,5 por ciento de las OMA. El microorganismo más frecuente en OMA fue el Staphilococcus aureus. No se aisló este mismo, en AS. Discusión: La presentación clínica inicial de las infecciones osteoarticulares (IOA), es menos evidente en la actualidad que en otros tiempos. Debido a que la identificación del microorganismo causante de la infección no es inmediata, pensamos que la terapia antibiótica (ATB) empírica inicial es fundamental en el manejo de estas patologías. Sugerimos nuevos estudios que propongan un determinado manejo ATB empírico inicial universal.


Subject(s)
Humans , Male , Female , Infant , Child, Preschool , Child , Arthritis, Infectious/epidemiology , Arthritis, Infectious/microbiology , Bacteria/isolation & purification , Osteomyelitis/epidemiology , Osteomyelitis/microbiology , Acute Disease , Age and Sex Distribution , Anti-Bacterial Agents/therapeutic use , Arthritis, Infectious/drug therapy , Cefazolin/therapeutic use , Osteomyelitis/drug therapy , /isolation & purification , Retrospective Studies , Staphylococcus aureus/isolation & purification
20.
Hanyang Medical Reviews ; : 49-59, 2007.
Article in Korean | WPRIM (Western Pacific) | ID: wpr-97525

ABSTRACT

Pancreatic tissue is maintained by a simple proliferation of the preexisting cells in adulthood, whereas, they are dynamically derived from precursor/ stem cells from ductal epithelia during prenatal life. It has been known that tissue regeneration rarely occurs in the normal adult pancreas, particularly in the human pancreas. However, regeneration can be experimentally induced in the adult pancreas in response to various tissue injuries such as partial resection, pancreatitis by obstruction of the duct, and chemical insults. Regenerating pancreatic tissue shares a common morphogenic feature of "neogenic regeneration" in all regenerating animal models. Neogenic regeneration occurs at the site of tissue injury by forming small tubular structures with elongated epithelial cells (ductules) which grow to form pancreatic ducts and acini. The endocrine cells, including insulin secreting beta cells, are also derived from these ductules. As a sequential process of neogenesis, the regenerating tissue becomes heterogeneous in composition. Some areas were composed by tubules and ductules in surrounding loose connective tissue while others were denser with differentiating acini derived from tubules or ductules. Such neogenic regeneration mimics tissue development during fetal pancreatic organogenesis. In the process of pancreatic neogenesis, we found unique expressions of bioactive proteins such as nestin and clusterin as morphogenic factors. It is likely that the stem/precursor cells could be recapitulated and regenerated to functional cells, including endocrine and exocrine pancreatic cells with acinar and ductal cells during neogenic regeneration of the pancreas.


Subject(s)
Adult , Humans , Candidiasis, Cutaneous , Clusterin , Connective Tissue , Endocrine Cells , Epithelial Cells , Insulin , Models, Animal , Nestin , Organogenesis , Pancreas , Pancreatic Ducts , Pancreatitis , Regeneration , Social Change , Stem Cells , Tinea
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