Integration of hydrothermal liquefaction of Cyanophyta and supercritical water oxidation of its aqueous phase products: Biocrude production and nutrient removal.

Cyanophyta has the potential to produce biocrude via hydrothermal liquefaction (HTL). However, aqueous phase products (APs), as by-products of HTL, pose a risk of eutrophication for the high levels of carbon, nitrogen, and phosphorus. Supercritical water oxidation (SCWO) can efficiently convert organics into small molecules, offering a technique for the harmless treatment of APs. Effects of holding time, pressure, and moisture content on the biocrude yields from isothermal HTL (300 °C) and fast HTL (salt bath temperature of 500 °C) were comprehensively investigated. Biocrude properties were characterized by elemental analysis, FT-IR and GC-MS. Subsequently, the APs obtained under the conditions producing the highest biocrude yield were subjected to SCWO at 550 °C with different oxidation coefficients (n) from 0 to 2. Removal rates of chemical oxygen demand (COD), ammonia nitrogen (NH3-N), and total phosphorus (TP) were further explored. The results show that the highest biocrude yields from isothermal HTL and fast HTL were 24.2 wt% (300 °C, 1800 s, 25 MPa, and 80 wt% moisture content) and 21.9 wt% (500 °C, 40 s, 25 MPa, and 80 wt% moisture content), respectively. The biocrude primarily consisted of N-containing heterocyclic compounds, amides, and acids. SCWO effectively degraded the COD and TP in APs, while the NH3-N required further degradation. At n = 2, the highest removal rates of COD, NH3-N and TP were 98.5 %, 22.6 % and 89.1 %, respectively.

Promising Antiparasitic Natural and Synthetic Products from Marine Invertebrates and Microorganisms.

Parasitic diseases still threaten human health. At present, a number of parasites have developed drug resistance, and it is urgent to find new and effective antiparasitic drugs. As a rich source of biological compounds, marine natural products have been increasingly screened as candidates for developing new antiparasitic drugs. The literature related to the study of the antigenic animal activity of marine natural compounds from invertebrates and microorganisms was selected to summarize the research progress of marine compounds and the structure-activity relationship of these compounds in the past five years and to explore the possible sources of potential antiparasitic drugs for parasite treatment.

Co-occurrence patterns and environmental factors associated with rapid onset of Microcystis aeruginosa bloom in a tropical coastal lagoon.

The environmental factors contributing to the Microcystis aeruginosa bloom (hereafter referred to as Microcystis bloom) are still debatable as they vary with season and geographic settings. We examined the environmental factors that triggered Microcystis bloom outbreak in India's largest brackish water coastal lagoon, Chilika. The warmer water temperature (25.31-32.48 °C), higher dissolved inorganic nitrogen (DIN) loading (10.15-13.53 µmol L-1), strong P-limitation (N:P ratio 138.47-246.86), higher water transparency (46.62-73.38 cm), and low-salinity (5.45-9.15) exerted a strong positive influence on blooming process. During the bloom outbreak, M. aeruginosa proliferated, replaced diatoms, and constituted 70-88% of the total phytoplankton population. The abundances of M. aeruginosa increased from 0.89 × 104 cells L-1 in September to 1.85 × 104 cells L-1 in November and reduced drastically during bloom collapse (6.22 × 103 cells L-1) by the late November of year 2017. The decrease in M. aeruginosa during bloom collapse was associated with a decline in DIN loading (2.97 µmol L-1) and N:P ratio (73.95). Sentinel-3 OLCI-based satellite monitoring corroborated the field observations showing Cyanophyta Index (CI) > 0.01 in September, indicative of intense bloom and CI < 0.0001 during late November, suggesting bloom collapse. The presence of M. aeruginosa altered the phytoplankton community composition. Furthermore, co-occurrence network indicated that bloom resulted in a less stable community with low diversity, inter-connectedness, and prominence of a negative association between phytoplankton taxa. Variance partitioning analysis revealed that TSM (16.63%), salinity (6.99%), DIN (5.21%), and transparency (5.15%) were the most influential environmental factors controlling the phytoplankton composition. This study provides new insight into the phytoplankton co-occurrences and combination of environmental factors triggering the rapid onset of Microcystis bloom and influencing the phytoplankton composition dynamics of a large coastal lagoon. These findings would be valuable for future bloom forecast modeling and aid in the management of the lagoon.

Seasonal Variation Characteristics and the Factors Affecting Plankton Community Structure in the Yitong River, China.

To explore how environmental factors affected the plankton structure in the Yitong River, we surveyed the water environmental factors and plankton population in different seasons. The results showed high total nitrogen concentrations in Yitong River throughout the year, while the total phosphorus, water temperature (WT), and chemical oxygen demand in summer were significantly higher than those in other seasons (p < 0.05), and the dissolved oxygen (DO) concentrations and TN/TP ratio were significantly lower (p < 0.01) than those in other seasons. There was no significant seasonal change in other environmental factors. Cyanophyta, Chlorophyta, and Bacillariophyta were the main phytoplankton phylum, while Protozoa and Rotifera were the main zooplankton phylum. The abundance and biomass of zooplankton and phytoplankton in the summer were higher than those in other seasons. Non-Metric Multidimensional scaling methods demonstrated obvious seasonal variation of phytoplankton in summer compared to spring and winter, while the seasonal variation of the zooplankton community was not obvious. The results of the redundancy analysis showed that WT, DO and nitrate nitrogen were the main environmental factors affecting phytoplankton abundance. In contrast to environmental factors, phytoplankton was the main factor driving the seasonal variation of the zooplankton community structure. Cyanophyta were positively correlated with the changes in the plankton community.

Biosorption of uranium by immobilized Nostoc sp. and Scenedesmus sp.: kinetic and equilibrium modeling.

Different activities related to uranium mining and nuclear industry may have a negative impact on the environment. Bioremediation of nuclear pollutants using microorganisms is an effective, safe, and economic method. The present study compared the uranium biosorption efficiency of two immobilized algae: Nostoc sp. (cyanophyte) and Scenedesmus sp. (chlorophyte). Effects of metal concentration, contact time, pH, and biosorbent dosage were also studied. The maximum biosorption capacity (60%) by Nostoc sp. was obtained at 300 mg/l uranium solution, 60 min, pH 4.5, and 4.2 g/l algal dosage, whereas Scenedesmus sp. maximally absorbed uranium (65 %) at 150 mg/l uranium solution, 40 min, pH 4.5, and 5.6 g/l of algal dosage. The interaction of metal ions as Na2SO4, FeCl3, CuCl2, NiCl2, CoCl2, CdCl2, and AlCl3 did not support the uranium biosorption by algae. The obtained data was adapted to the linearized form of the Langmuir isotherm model. The experimental qmax values were 130 and 75 mg/g for Nostoc sp. and Scenedesmus sp., respectively. Moreover, the pseudo-second-order kinetic model was more applicable, as the calculated parameters were close to the experimental data. The biosorbents were also characterized by Fourier-transform infrared spectroscopy (ATR-FTIR), energy-dispersive X-ray spectroscopy (EDX), and scanning electron microscopy (SEM) analyses. The results suggest the applicability of algae, in their immobilized form, for recovery and biosorption of uranium from aqueous solution.

Using physicochemical and biological parameters for the evaluation of water quality and environmental conditions in international wetlands on the southern part of Lake Urmia, Iran.

The Kani Barazan and Yadegarlou wetlands in the southern part of Lake Urmia (Iran) have been substantially modified due to human activities and anthropogenic use. In recent years, freshwater-based eco-biological studies to recognize the quality of water resources have been greatly expanded. Microalgae and Cyanophyta are considered important bioindicators for the evaluation of water quality and wetland health worldwide. Herein, 22 microalgae and 5 Cyanophyta genera were identified in both wetlands, in which Cyanophyta has mainly caused blooms. Principal components analysis (PCA) was carried out based on links between the distribution of microalgae and Cyanophyta with physical and chemical parameters. The data showed that depth, turbidity, and the temperature had a significant influence on the microalga and Cyanophyta communities in both wetlands. Based on the biological properties, it seems that the Kani Barazan and Yadegarlou international wetlands experience meso-eutrophic conditions. The integration of the physical, chemical and biological parameters with the water quality index (WQI) revealed that both wetlands were polluted as a consequence of human activities. Moreover, a close relationship between WQI and the biological parameters was documented. Thus, we concluded that microalgae and Cyanophyta communities, their abundance patterns, and water quality changes could provide valuable data for the conservation of the Kani Barazan and Yadegarlou international wetlands.

Responses of phytoplankton community structure and association to variability in environmental drivers in a tropical coastal lagoon.

Spatial and seasonal heterogeneity in phytoplankton communities are governed by many biotic and abiotic drivers. However, the identification of long-term spatial and temporal trends in abiotic drivers, and their interdependencies with the phytoplankton communities' structure is understudied in tropical brackish coastal lagoons. We examined phytoplankton communities' spatiotemporal dynamics from a 5-year dataset (n = 780) collected from 13 sampling stations in Chilika Lagoon, India, where the salinity gradient defined the spatial patterns in environmental variables. Generalized additive models showed a declining trend in phytoplankton biomass, pH, and dissolved PO4 in the lagoon. Hierarchical modelling of species communities revealed that salinity (44.48 ± 28.19%), water temperature (4.37 ± 5.65%), and season (4.27 ± 0.96%) accounted for maximum variation in the phytoplankton composition. Bacillariophyta (Indicator Value (IV): 0.74) and Dinophyta (IV: 0.72) emerged as top indicators for polyhaline regime whereas, Cyanophyta (IV: 0.81), Euglenophyta (IV: 0.79), and Chlorophyta (IV: 0.75) were strong indicators for oligohaline regime. The responses of Dinophyta and Chrysophyta to environmental drivers were much more complex as random effects accounted for ~70-75% variation in their abundances. Prorocentrum minimum (IV: 0.52), Gonyaulax sp. (IV: 0.52), and Alexandrium sp. (IV: 0.51) were potential indicators of P-limitation. Diploneis weissflogii (IV: 0.43), a marine diatom, emerged as a potential indicator of N-limitation. Hierarchical modelling revealed the positive association between Cyanophyta, Chlorophyta, and Euglenophyta whereas, Dinophyta and Chrysophyta showed a negative association with Cyanophyta, Chlorophyta, and Euglenophyta. Landsat 8-Operational Land Imager satellite models predicted the highest and lowest Cyanophyta abundances in northern and southern sectors, respectively, which were in accordance with the near-coincident field-based measurements from the lagoon. This study highlighted the dynamics of phytoplankton communities and their relationships with environmental drivers by separating the signals of habitat filtering and biotic interactions in a monsoon-regulated tropical coastal lagoon.

Phytoplankton distribution characteristics and its relationship with bacterioplankton in Dianchi Lake.

Phytoplankton and bacterioplankton perform important ecological functions in lake ecosystem. In this paper, the abundance and composition of phytoplankton and bacterioplankton at 13 sites of Dianchi lake during the wet and dry seasons were monitored, and the relationship between phytoplankton and bacterioplankton in this plateau lake was studied. Phytoplankton community structure analysis was carried out by ocular method, and bacterioplankton was investigated by high-throughput 16S rRNA gene Illumina sequencing. The relationship between phytoplankton and bacterioplankton was observed using redundancy analysis. The results showed that 87 species of phytoplankton belonging to 5 phyla and 29 genera were identified in Dianchi lake. Phytoplankton diversity and richness were higher in the wet season than those in the dry season. In the wet season, Cyanophyta was the dominant phylum whose density was 2.01 × 108 cells/L, accounting for more than 90% of the total algae, then followed by Chlorophyta, Bacillariophyta, Chrysophyta, and Cryptophyta. The spatial distribution of phytoplankton in the wet season and dry seasons showed significant differences. In the dry season, the north-central part of Dianchi lake was dominated by Limnothrix redekei and Microcystis minutissima of Cyanophyta, while Pseudanabaena moniliformis and Coelosphaerium nagelianum of Cyanophyta mainly was dominated in the south of Dianchi lake. In the wet season, Microcystis minutissima of Cyanophyta was the dominant species all the area, while Limnothrix redekei of Cyanophyta was second dominant. Proteobacteria and Bacteroidetes were the dominant phyla among bacterioplankton. The community structure of bacterioplankton was influenced by Cyanophyta and Bacillariophyta. Cyanophyta had a major influence on Pseudomonas, Acinetobacter of Proteobacteria, and Flavobacterium of Bacteroidetes. Bacillariophyta showed a strong correlation with Gemmobacter, Stenotrophomonas, and Aeromonas of Proteobacteria. Cyanophyta and Bacillariophyta produced the most significant impact on predicted functional genes of bacterioplankton, and the predicted functional genes of the samples were different in different seasons. Cell densities of Cyanophyta were positively related to metabolism-predicted functional genes of bacterioplankton. Bacillariophyta and Cryptophyta had an impact on most of the cellular processes and signaling predicted functional genes. Bacterioplankton-predicted functional gene information storage and processing were significantly affected by cell densities of Chlorophyta. Therefore, the analysis of the phytoplankton community and the bacterioplankton-predicted functional gene in Dianchi lake exerts a great significance in revealing the ecosystem function of plateau lakes and harmful algal bloom control.

Applications and limitations of regulatory RNA elements in synthetic biology and biotechnology.

Synthetic biology requires the design and implementation of novel enzymes, genetic circuits or even entire cells, which can be controlled by the user. RNA-based regulatory elements have many important functional properties in this regard, such as their modular nature and their ability to respond to specific external stimuli. These properties have led to the widespread exploration of their use as gene regulation devices in synthetic biology. In this review, we focus on two major types of RNA elements: riboswitches and RNA thermometers (RNATs). We describe their general structure and function, before discussing their potential uses in synthetic biology (e.g. in the production of biofuels and biodegradable plastics). We also discuss their limitations, and novel strategies to implement RNA-based regulatory devices in biotechnological applications. We close with a description of some common model organisms used in synthetic biology, with a focus on the current applications and limitations of RNA-based regulation.

El género Sphaerocavum y dominancia de S. brasiliense y Microcystis wesenbergii (Microcystaceae, Cyanophyceae) en la floración algal de la laguna Huacachina, Perú / The genus Sphaerocavum and the dominance of S. brasiliense and Microcystis wesenbergii (Microcystaceae, Cyanophyceae) in the algae bloom of Huacachina lagoon, Peru

En el presente trabajo se registra por primera vez a las cianobacterias Sphaerocavum brasiliense Azevedo y Sant'Anna y Microcystis wesenbergii (Komárek) Komárek in Kondrateva (Microcystaceae, Cyanophyceae) en una floración algal de la laguna Huacachina (Ica), incluyendo el primer reporte del género Sphaerocavum para el Perú. Se sugiere el monitoreo de estas cianobacterias por ser formadoras de floraciones algales.

The present work registers for the first time the cyanobacteria Sphaerocavum brasiliense Azevedo y Sant'Anna and Microcystis wesenbergii (Komárek) Komárek in Kondrateva (Microcystaceae, Cyanophyceae) in an algal bloom on Huacachina lagoon (Ica), including the first report of Sphaerocavum for Peru. We suggest the necessity of monitoring these bloom-forming cyanobacteria.

Distribution of arsenic between the particulate and aqueous phases in surface water from three freshwater lakes in China.

Total arsenic (As) in suspended particulate matter (SPM) of lacustrine ecosystems has been extensively documented, but knowledge on the distribution of As between the particle and aqueous phases in freshwater lakes remains largely unknown. The present study employed a rapid method to determine the total and dissolved As and As in SPM at sites covering the entire areas of three large shallow lakes in China, e.g., Taihu, Chaohu, and Dianchi, to obtain a "representative" mean value of the As concentration in various phases. The average concentrations of total and dissolved As were below 6.0 and 3.3 µg/L, respectively. Arsenic in SPM was much higher than that in waters, as ranging from 24.7 to 516 µg/g. Lake Taihu exhibited extensive seasonal variation both in total and dissolved As, while little difference was observed in SPM concentration, with an average value of 54.2 and 49.3 mg/L in winter and summer, respectively. Among the algae in the three lakes, Cyanophyta dominated in both cell abundance and biomass. Algae mass occupied significant parts of SPM, especially in Dianchi; the proportions of algae in the SPM fractions were measured as 10.4 and 7.1 % in Taihu in winter and summer, 4.5 % in Chaohu, and 53.3 % in Dianchi, both in summer season. The total As in SPM had a significant positive relationship with total As in water and a high distribution coefficient (Kd) between SPM and dissolved fraction of As at all three lakes. The high proportions of Algae, especially Cyanophyta in the composition of SPM in the three large shallow lakes, might play an important role in affecting the As distribution between the aqueous and particulate phases in aquatic ecosystem.

Monitoring of Water Quality and Microalgae Species Composition of Penaeus monodon Ponds in Pulau Pinang, Malaysia.

Many reports have revealed that the abundance of microalgae in shrimp ponds vary with changes in environmental factors such as light, temperature, pH, salinity and nutrient level throughout a shrimp culture period. In this study, shrimp cultivation period was divided into three stages (initial = week 0-5, mid = week 6-10 and final = week 11-15). Physical and chemical parameters throughout the cultivation period were studied and species composition of microalgae was monitored. Physical parameters were found to fluctuate widely with light intensity ranging between 182.23-1278 µmol photon m(-2)s(-1), temperature between 29.56°C -31.59°C, dissolved oxygen (DO) between 4.56-8.21 mg/l, pH between 7.65-8.49 and salinity between 20‰-30‰. Ammonium (NH4 (+)-N), nitrite (NO2 (-)-N), nitrate (NO3 (-)-N), and orthophosphate (PO4 (3-)-P) concentrations in the pond at all cultivation stages ranged from 0.017 to 0.38 mg/l, 0.24 to 2.12 mg/l, 0.06 to 0.98 mg/l and 0.16 to 1.93 mg/l respectively. Statistical test (ANOVA) showed that there were no significant difference (p<0.05) in nutrients concentrations among the cultivation stages. All nutrients concentrations however were still in the tolerable level and safe for shrimp culture. The chlorophyll a contents were found to range from 5.03±2.17 to 32.61±0.35 µg/l throughout the cultivation period. A total of 19 microalgae species were found in the shrimp pond, with diatoms contributing up to 72% of the species followed by Chlorophyta (11%) and Cyanophyta (11%). However, weekly species abundance varied through the study period. At the initial stage, when there were no shrimps in the pond, Anabaena spp. and Oscillatoria spp. (Cyanophyta) were the dominant species, followed by Chlorella sp. and Dunaliella sp. (Chlorophyta). When shrimps were introduced into the pond, Amphora sp., Navicula sp. Gyrosigma sp. and Nitzschia sp. (diatoms) started to exist. At the middle and towards the final stage of the shrimp culture period diatoms were the dominant species. The Chlorophyta (Chlorella sp.) domination took place only twice, which was at week 2 and 13. The absence of some of the coastal water microalgae species in the shrimp pond was most likely due to the fact that they could not tolerate the physicochemical factors of harsh environment. In this study, Cylindrotheca closterium was regarded as the most tolerant species among the microalgae due to its ability to exist for 6 weeks out of the 15 weeks of cultivation.

Structure and dynamics of phytoplankton in an Amazon lake, Brazil

Natural lake systems represent important reservoirs for residential water supply, fish production, recreational activities and enjoyment of their natural beauty. Nevertheless, human impacts may affect their health status resulting in degradation and loss of biodiversity. The aim of the present study was to obtain data on the health status of a natural lake located in an indigenous reservation in the Brazilian Amazon, using the phytoplankton community changes along the rainy (June) and dry (November) seasons of 2006. We collected water (temperature, pH, Secchi depth and conductivity) and phytoplankton samples from the subsurface, middle of the water column, and approximately 30cm above the bottom, over 24-hour sampling periods, from a central station in the lake. Samples taken from biotic and abiotic variables were correlated using canonical correspondence analysis (CCA). Results showed that the lake exhibited high temperatures in both seasons, and showed thermal stratification only during the rainy season. Dissolved oxygen exhibited a clinograde pattern in the rainy season and high oxygen in the hypolimnion in the dry season. In the rainy season, the water near the bottom was acidic, turbid and had a greater concentration of phosphorus. Dissolved oxygen, conductivity, pH, nitrite, total phosphorus and total dissolved phosphorus exhibited diel variations in the rainy season, whereas water temperature, dissolved oxygen, total nitrogen and total dissolved phosphorus exhibited significant differences between hours of the day in the dry season. The phytoplankton was represented by 39 taxa, and Chlorophyta showed the greatest species richness, totaling 25 taxa. Among Chlorophyta, desmids were the most diverse, accounting 52%. Bacillariophyta (nine species) was the second most diverse group. Cyanophyta was represented by three species, including Merismopedia tenuissima, the most abundant taxon. Despite the occurrence of taxa that indicate organic pollution, their biomass and frequency indicate that the system is not currently threatened. Lake Caracaranã is an oligotrophic system, with low algal density and isolated blooming episodes due to its shallow depth. Rev. Biol. Trop. 58 (4): 1421-1436. Epub 2010 December 01.

Los sistemas de lagos naturales constituyen reservorios importantes para el abastecimiento de agua residencial, la producción de peces, actividades recreativas y el disfrute de su belleza natural. Sin embargo, el impacto humano puede afectar su estado de salud como resultado de la degradación y la pérdida de biodiversidad. El objetivo del estudio fue determinar el estado de salud de un lago natural en una reserva indígena de la Amazonia brasileña, usando los cambios de la comunidad fitoplanctónica a lo largo de la época lluviosa (junio) y seca (de noviembre) en 2006. Se recogieron muestras de agua (temperatura, pH, conductividad y profundidad de Secchi) y fitoplancton del subsuelo, columna media del agua y a 30cm por encima del fondo, cada 24horas, en una estación central en el lago. Las variables bióticas y abióticas se correlacionaron mediante análisis de correspondencia canónica (CCA). Los resultados mostraron que el lago exhibió altas temperaturas en ambas temporadas, una estratificación térmica solamente durante la época lluviosa así como un patrón vertical de oxígeno disuelto, mientras que en la estación seca se observó una alta cantidad de oxígeno en el hipolimnion. En la época lluviosa, el agua cercana al fondo era ácida, turbia y tenía una mayor concentración de fósforo. Oxígeno disuelto, conductividad, pH, nitritos, fósforo total y disuelto mostraron variaciones diarias en la época lluviosa, mientras que la temperatura del agua, oxígeno disuelto, nitrógeno total y fósforo disuelto mostraron una diferencia significativa en las horas del día durante la estación seca. El fitoplancton estuvo representado por 39 táxones, y Chlorophyta mostró la mayor riqueza de especies, un total de 25 táxones. En Chlorophyta, los desmidios fueron los más diversos, lo que representa el 52%. Bacillariophyta (nueve especies) fue el segundo grupo más diverso. En Cyanophyta se encontraron tres especies, incluyendo Merismopedia tenuissima, el taxon más abundante. A pesar de la ocurrencia de taxones que indican contaminación orgánica, la biomasa y frecuencia sugieren que el sistema actualmente no está en peligro. Lago Caracaranã es un sistema oligotrófico, con baja densidad de algas y aislados episodios de afloramiento debido a su poca profundidad.