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1.
NMR Biomed ; : e5182, 2024 Jul 12.
Article in English | MEDLINE | ID: mdl-38993048

ABSTRACT

Currently, brain iron content represents a new neuromarker for understanding the physiopathological mechanisms leading to Parkinson's disease (PD). In vivo quantification of biological iron is possible by reconstructing magnetic susceptibility maps obtained using quantitative susceptibility mapping (QSM). Applying QSM is challenging, as up to now, no standardization of acquisition protocols and phase image processing has emerged from referenced studies. Our objectives were to compare the accuracy and the sensitivity of 10 QSM pipelines built from algorithms from the literature, applied on phantoms data and on brain data. Two phantoms, with known magnetic susceptibility ranges, were created from several solutions of gadolinium chelate. Twenty healthy volunteers from two age groups were included. Phantoms and brain data were acquired at 1.5 and 3 T, respectively. Susceptibility-weighted images were obtained using a 3D multigradient-recalled-echo sequence. For brain data, 3D anatomical T1- and T2-weighted images were also acquired to segment the deep gray nuclei of interest. Concerning in vitro data, the linear dependence of magnetic susceptibility versus gadolinium concentration and deviations from the theoretically expected values were calculated. For brain data, the accuracy and sensitivity of the QSM pipelines were evaluated in comparison with results from the literature and regarding the expected magnetic susceptibility increase with age, respectively. A nonparametric Mann-Whitney U-test was used to compare the magnetic susceptibility quantification in deep gray nuclei between the two age groups. Our methodology enabled quantifying magnetic susceptibility in human brain and the results were consistent with those from the literature. Statistically significant differences were obtained between the two age groups in all cerebral regions of interest. Our results show the importance of optimizing QSM pipelines according to the application and the targeted magnetic susceptibility range, to achieve accurate quantification. We were able to define the optimal QSM pipeline for future applications on patients with PD.

2.
J Magn Reson ; 364: 107704, 2024 May 20.
Article in English | MEDLINE | ID: mdl-38879926

ABSTRACT

Magic-angle spinning (MAS) solid-state NMR methods are crucial in many areas of biology and materials science. Conventional probe designs have often been specified with 0.1 part per million (ppm) or 100 part per billion (ppb) magnetic field resolution, which is a limitation for many modern scientific applications. Here we describe a novel 5-mm MAS module design that significantly improves the linewidth and line shape for solid samples by an improved understanding of the magnetic susceptibility of probe materials and geometrical symmetry considerations, optimized to minimize the overall perturbation to the applied magnetic field (B0). The improved spinning module requires only first and second order shimming adjustments to achieve a sub-Hz resolution of 13C resonances of adamantane at 150 MHz Larmor frequency (14.1Tesla magnetic field). Minimal use of third and higher order shims improves experimental reproducibility upon sample changes and the exact placement within the magnet. Furthermore, the shimming procedure is faster, and the required gradients smaller, thus minimizing thermal drift of the room temperature (RT) shims. We demonstrate these results with direct polarization (Bloch decay) and cross polarization experiments on adamantane over a range of sample geometries and with multiple superconducting magnet systems. For a direct polarization experiment utilizing the entire active sample volume of a 5-mm rotor (90 µl), we achieved full width at half maximum (FWHM) of 0.76 Hz (5 ppb) and baseline resolved the 13C satellite peaks for adamantane as a consequent of the 7.31 Hz (59 ppb) width at 2% intensity. We expect these approaches to be increasingly pivotal for high-resolution solid-state NMR spectroscopy at and above 1 GHz 1H frequencies.

3.
Article in English | MEDLINE | ID: mdl-38870528

ABSTRACT

OBJECTIVES: To evaluate magnetic susceptibility artefacts produced by orthodontic wires on MRI and the influence of wire properties and MRI image sequences on the magnitude of the artefact. METHODS: Arch form orthodontic wires [four stainless steels (SS), one cobalt chromium (CC) alloy, 13 titanium (Ti) alloys] were embedded in a polyester phantom, and scanned using a 1.5-T superconducting magnet scanner with an eight-channel phased-array coil. All wires were scanned with T1-weighted spin echo (SE) and gradient echo (GRE) sequences according to the American Society for Testing and Materials (ASTM) F2119-07 standard. The phantom was also scanned other eight sequences. Artefacts were measured using the ASTM F2119-07 definition and OsiriX software. Artefact volume was analyzed according to metal composition, wire length, number of wires, wire thickness, and imaging sequence as factors. RESULTS: With SE/GRE, black/white artefacts volumes from all SS wires were significantly larger than those produced by CC and Ti wires (P < 0.01). With the GRE, the black artefacts volume was highest with the SS wires. With the SE, the black artefacts volume was small, whereas white artefacts were noticeable. The cranio-caudal extent of the artefacts was significantly longer with SS wires (P < 0.01). Although a direct relationship of wire length, number of wires and wire thickness with artefact volume was noted, these factors did not influence artefact extension in the cranio-caudal direction. CONCLUSIONS: Ferromagnetic/paramagnetic orthodontic wires create artefacts due to local alteration of magnetic field homogeneity. The SS-type wires produced the largest artefacts followed by CC and Ti.

4.
Sensors (Basel) ; 24(12)2024 Jun 11.
Article in English | MEDLINE | ID: mdl-38931574

ABSTRACT

Coils are one of the basic elements employed in devices. They are versatile, in terms of both design and manufacturing, according to the desired inductive specifications. An important characteristic of coils is their bidirectional action; they can both produce and sense magnetic fields. Referring to sensing, coils have the unique property to inductively translate the temporal variation of magnetic flux into an AC voltage signal. Due to this property, they are massively used in many areas of science and engineering; among other disciplines, coils are employed in physics/materials science, geophysics, industry, aerospace and healthcare. Here, we present detailed and exact mathematical modeling of the sensing ability of the three most basic scalar assemblies of coaxial pick-up coils (PUCs): in the so-called zero derivative configuration (ZDC), having a single PUC; the first derivative configuration (FDC), having two PUCs; and second derivative configuration (SDC), having four PUCs. These three basic assemblies are mathematically modeled for a reference case of physics; we tackle the AC voltage signal, VAC (t), induced at the output of the PUCs by the temporal variation of the magnetic flux, Φ(t), originating from the time-varying moment, m(t), of an ideal magnetic dipole. Detailed and exact mathematical modeling, with only minor assumptions/approximations, enabled us to obtain the so-called sensing function, FSF, for all three cases: ZDC, FDC and SDC. By definition, the sensing function, FSF, quantifies the ability of an assembly of PUCs to translate the time-varying moment, m(t), into an AC signal, VAC (t). Importantly, the FSF is obtained in a closed-form expression for all three cases, ZDC, FDC and SDC, that depends on the realistic, macroscopic characteristics of each PUC (i.e., number of turns, length, inner and outer radius) and of the entire assembly in general (i.e., relative position of PUCs). The mathematical methodology presented here is complete and flexible so that it can be easily utilized in many disciplines of science and engineering.

5.
Acta Biomater ; 2024 Jun 17.
Article in English | MEDLINE | ID: mdl-38897338

ABSTRACT

Metallic biomaterials, such as stainless steels, cobalt-chromium-molybdenum (Co-Cr-Mo) alloys, and titanium (Ti) alloys, have long been used as load-bearing implant materials due to their metallic mechanical strength, corrosion resistance, and biocompatibility. However, their magnetic susceptibility and elastic modulus of more than 100 GPa significantly restrict their therapeutic applicability. In this study, spinodal Zr60Nb40, Zr50Nb50, and Zr40Nb60 (at.%) alloys were selected from the miscibility gap based on the Zr-Nb binary phase diagram and prepared by casting, cold rolling, and aging. Their microstructure, mechanical properties, corrosion resistance, magnetic susceptibility, and biocompatibility were systematically evaluated. Spinodal decomposition to alternating nanoscale Zr-rich ß1 and Nb-rich ß2 phases occurred in the cold-rolled Zr-Nb alloys during aging treatment at 650 °C. In addition, a minor amount of α phase was precipitated in Zr60Nb40 due to the thermodynamic instability of the Zr-rich ß1 phase. Spinodal decomposition significantly improved the mechanical strength of the alloys due to nanosized dual-cubic reinforcement. The Zr-Nb alloys showed an electrochemical corrosion rate of 94-262 nm per year in Hanks' solution because of formation of dense passive films composed of ZrO2 and Nb2O5 during the polarization process. The magnetic susceptibilities of the Zr-Nb alloys were significantly lower than those of commercial Co-Cr-Mo and Ti alloys. The cell viability of the Zr-Nb alloys was more than 98 % toward MC3T3-E1 cells. Overall, the spinodal Zr-Nb alloys have enormous potential as bone-implant materials due to their outstanding overall mechanical properties, extraordinary corrosion resistance, low magnetic susceptibility, and sufficient bicompatibility. STATEMENT OF SIGNIFICANCE: This work reports on spinodal Zr-Nb alloys with heterostructure. Spinodal decomposition significantly improved their mechanical strength due to the nanosized dual-cubic reinforcement. The Zr-Nb alloys showed large corrosion resistance in Hanks' solution because of formation of dense passivation films composed of ZrO2 and Nb2O5 during the polarization process. The magnetic susceptibilities of the Zr-Nb alloys were significantly lower than those of commercial Co-Cr-Mo and Ti alloys. The cell viability of the Zr-Nb alloys was more than 98 % toward MC3T3-E1 cells. The results demonstrate that spinodal Zr-Nb alloys have enormous potential as bone-implant materials due to their outstanding overall mechanical properties, high corrosion resistance, low magnetic susceptibility, and sufficient biocompatibility.

6.
Materials (Basel) ; 17(11)2024 Jun 04.
Article in English | MEDLINE | ID: mdl-38894008

ABSTRACT

We synthesized some SWCNTs films under different magnetic fields and temperatures in a magnetic field-assisted FC-CVD and obtained Raman spectra of the films. By analyzing the Raman spectra, it was concluded that the SWCNTs films had defects, and the relative content of m-SWCNTs in the SWCNTs films was obtained. The trajectory of m-SWCNTs was obtained by analyzing the motion behavior of m-SWCNTs flow in the field-assisted system, and a model was built to describe the relationship between the relative content of m-SWCNTs and magnetic fields. The axial magnetic susceptibility of m-SWCNTs as a parameter was obtained by fitting the experimental results and the model. This is the first time that the axial magnetic susceptibility of m-SWCNTs has been obtained. The result obtained at 1273 K is at least two orders of magnitude greater than the magnetic susceptibilities and anisotropies of purified m-SWCNTs at 300 K, indicating that the defects increase the Curie temperature and Curie constant of m-SWCNTs. This is consistent with the spin-polarized density functional theory, which predicts that m-SWCNTs with vacancies have local magnetic moments around the vacancies and exhibit ferro- or ferrimagnetism.

7.
Neuroimage ; 296: 120676, 2024 Aug 01.
Article in English | MEDLINE | ID: mdl-38852804

ABSTRACT

To separate the contributions of paramagnetic and diamagnetic sources within a voxel, a magnetic susceptibility source separation method based solely on gradient-echo data has been developed. To measure the opposing susceptibility sources more accurately, we propose a novel single-orientation quantitative susceptibility mapping method with adaptive relaxometric constant estimation (QSM-ARCS) for susceptibility source separation. Moreover, opposing susceptibilities and their anisotropic effects were determined in healthy volunteers in the white matter. Multiple spoiled gradient echo and diffusion tensor imaging of ten healthy volunteers was obtained using a 3 T magnetic resonance scanner. After the opposing susceptibility and fractional anisotropy (FA) maps had been reconstructed, the parametric maps were spatially normalized. To evaluate the agreements of QSM-ARCS against the susceptibility source separation method using R2 and R2* maps (χ-separation) by Bland-Altman plots, the opposing susceptibility values were measured using white and deep gray matter atlases. We then evaluated the relationships between the opposing susceptibilities and FAs in the white matter and used a field-to-fiber angle to assess the fiber orientation dependencies of the opposing susceptibilities. The susceptibility maps in QSM-ARCS were successfully reconstructed without large artifacts. In the Bland-Altman analyses, the opposing QSM-ARCS susceptibility values excellently agreed with the χ-separation maps. Significant inverse and proportional correlations were observed between FA and the negative and positive susceptibilities estimated by QSM-ARCS. The fiber orientation dependencies of the negative susceptibility represented a nonmonotonic feature. Conversely, the positive susceptibility increased linearly with the fiber angle with respect to the B0 field. The QSM-ARCS could accurately estimate the opposing susceptibilities, which were identical values of χ-separation, even using gradient echo alone. The opposing susceptibilities might offer direct biomarkers for assessment of the myelin and iron content in glial cells and, through the underlying magnetic sources, provide biologic insights toward clinical transition.


Subject(s)
Diffusion Tensor Imaging , White Matter , Humans , Male , Adult , Female , White Matter/diagnostic imaging , Diffusion Tensor Imaging/methods , Brain/diagnostic imaging , Young Adult , Brain Mapping/methods , Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging/methods
8.
Article in English | MEDLINE | ID: mdl-38941984

ABSTRACT

The magneto-plethysmograph method is a combination of magnetic field and sensors used to detect changes in blood flow pulsation. However, to detect the magnetic properties of blood related to hemoglobin concentration, physical modeling and simulation are required. This approach involves designing simulations using magnetic field equations and magnetic susceptibility, where a permanent magnet is placed on the surface of blood vessels, and sensors based on giant magnetoresistance are placed at a distance r. The design originates from a simple approach involving the magnetization and detection of Fe atoms in hemoglobin. Parameters involved include the magnetic susceptibility of oxyhemoglobin and deoxyhemoglobin, with an external magnetic field exceeding 1 Tesla. From the physical modeling and simulation, graphs are obtained depicting the influence of hemoglobin concentration on the number of Fe atoms and its magnetization. This enables the design of non-invasive hemoglobin measurement sensor devices. The uniqueness of this simple physical model and simulation lies in its ability to produce specially designed device models for measuring hemoglobin concentration. This differs from other research focusing on blood flow pulse measurements; the results of this study provide new insights into the benefits of simple physics equations that can be developed for medical diagnostic research and device development.

9.
J Phys Condens Matter ; 36(39)2024 Jul 04.
Article in English | MEDLINE | ID: mdl-38936393

ABSTRACT

The magnetic properties of a circular graphene nanoribbon (carbon belt) in a magnetic field parallel to its central axis is studied using a tight-binding model. Orbital magnetic susceptibility is calculated using an analytical expression of the energy eigenvalues as a function of the magnetic flux density for any size, and its temperature dependence is considered. In the absence of electron hopping parallel to the magnetic field, the orbital magnetic susceptibility diverges at absolute zero if the chemical potential is zero and the number of atoms is a multiple of four. As the temperature increases, the magnitude of susceptibility decreases according to the power law, whose exponent depends on the size. In the presence of electron hopping parallel to the magnetic field, the divergence of the susceptibility near absolute zero disappears, and the sign changes with the transfer integral parallel to the magnetic field and the temperature.

10.
Chempluschem ; : e202400109, 2024 May 10.
Article in English | MEDLINE | ID: mdl-38727531

ABSTRACT

In the work described herein, the spin relaxation properties of the mononuclear tetrahedral S=2 [Fe{(SPiPr2)2N}2] complex (1) were studied by employing static and dynamic magnetic measurements at liquid helium temperatures. In the absence of an external direct current (DC) magnetic field, 1 exhibits fast magnetization relaxation. However, in the presence of external magnetic fields of a few kOe, slow relaxation is induced as monitored by alternating current (AC) magnetic susceptibility measurements up to 10 kHz, in the temperature range 2-5 K. Analysis of the temperature dependence of the corresponding relaxation time reveals contributions by Quantum Tunnelling of Magnetization, and the Direct and Orbach processes in the magnetization relaxation mechanism of 1. The energy barrier, Ueff, of the Orbach process, as determined by this analysis, is compared with that related to the zero-field splitting parameters of 1 which were previously determined by high- frequency and -field electron paramagnetic resonance and Mössbauer spectroscopies.

11.
bioRxiv ; 2024 Apr 15.
Article in English | MEDLINE | ID: mdl-38659855

ABSTRACT

Tauopathies, including Alzheimer's disease (AD), are neurodegenerative disorders characterized by hyperphosphorylated tau protein aggregates in the brain. In addition to protein aggregates, microglia-mediated inflammation and iron dyshomeostasis are other pathological features observed in AD and other tauopathies. It is known that these alterations at the subcellular level occur much before the onset of macroscopic tissue atrophy or cognitive deficits. The ability to detect these microstructural changes with MRI therefore has substantive importance for improved characterization of disease pathogenesis. In this study, we demonstrate that quantitative susceptibility mapping (QSM) with paramagnetic and diamagnetic susceptibility source separation has the potential to distinguish neuropathological alterations in a transgenic mouse model of tauopathy. 3D multi-echo gradient echo data were acquired from fixed brains of PS19 (Tau) transgenic mice and age-matched wild-type (WT) mice (n = 5 each) at 11.7 T. The multi-echo data were fit to a 3-pool complex signal model to derive maps of paramagnetic component susceptibility (PCS) and diamagnetic component susceptibility (DCS). Group-averaged signal fraction and composite susceptibility maps showed significant region-specific differences between the WT and Tau mouse brains. Significant bilateral increases in PCS and |DCS| were observed in specific hippocampal and cortical sub-regions of the Tau mice relative to WT controls. Comparison with immunohistological staining for microglia (Iba1) and phosphorylated-tau (AT8) further indicated that the PCS and DCS differences corresponded to regional microgliosis and tau deposition in the PS19 mouse brains, respectively. The results demonstrate that quantitative susceptibility source separation may provide sensitive imaging markers to detect distinct pathological alterations in tauopathies.

12.
Solid State Nucl Magn Reson ; 131: 101924, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38613940

ABSTRACT

14N NMR of magnetically oriented microcrystals is reported. With a home-built 1H-13C-14N probe capable of modulating the rotation of the sample around the axis normal to the magnetic field, magnetically oriented microcrystal suspension (MOMS) of l-alanine is made. 14N NMR spectra acquired with various timings during intermittent rotation lead to a rotation pattern of the MOMS similar to that of a single crystal. The effect of orientational distribution of the microcrystals to broadening of the resonance line is discussed.

13.
Magn Reson Med Sci ; 23(3): 291-306, 2024 Jul 01.
Article in English | MEDLINE | ID: mdl-38644201

ABSTRACT

In MRI, researchers have long endeavored to effectively visualize myelin distribution in the brain, a pursuit with significant implications for both scientific research and clinical applications. Over time, various methods such as myelin water imaging, magnetization transfer imaging, and relaxometric imaging have been developed, each carrying distinct advantages and limitations. Recently, an innovative technique named as magnetic susceptibility source separation has emerged, introducing a novel surrogate biomarker for myelin in the form of a diamagnetic susceptibility map. This paper comprehensively reviews this cutting-edge method, providing the fundamental concepts of magnetic susceptibility, susceptibility imaging, and the validation of the diamagnetic susceptibility map as a myelin biomarker that indirectly measures myelin content. Additionally, the paper explores essential aspects of data acquisition and processing, offering practical insights for readers. A comparison with established myelin imaging methods is also presented, and both current and prospective clinical and scientific applications are discussed to provide a holistic understanding of the technique. This work aims to serve as a foundational resource for newcomers entering this dynamic and rapidly expanding field.


Subject(s)
Brain , Magnetic Resonance Imaging , Myelin Sheath , Humans , Magnetic Resonance Imaging/methods , Brain/diagnostic imaging , Image Processing, Computer-Assisted/methods
14.
Magn Reson Imaging ; 110: 104-111, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38631534

ABSTRACT

PURPOSE: Field-to-susceptibility inversion in quantitative susceptibility mapping (QSM) is ill-posed and needs numerical stabilization through either regularization or oversampling by acquiring data at three or more object orientations. Calculation Of Susceptibility through Multiple Orientations Sampling (COSMOS) is an established oversampling approach and regarded as QSM gold standard. It achieves a well-conditioned inverse problem, requiring rotations by 0°, 60° and 120° in the yz-plane. However, this is impractical in vivo, where head rotations are typically restricted to a range of ±25°. Non-ideal sampling degrades the conditioning with residual streaking artifacts whose mitigation needs further regularization. Moreover, susceptibility anisotropy in white matter is not considered in the COSMOS model, which may introduce additional bias. The current work presents a thorough investigation of these effects in primate brain. METHODS: Gradient-recalled echo (GRE) data of an entire fixed chimpanzee brain were acquired at 7 T (350 µm resolution, 10 orientations) including ideal COSMOS sampling and realistic rotations in vivo. Comparisons of the results included ideal COSMOS, in-vivo feasible acquisitions with 3-8 orientations and single-orientation iLSQR QSM. RESULTS: In-vivo feasible and optimal COSMOS yielded high-quality susceptibility maps with increased SNR resulting from averaging multiple acquisitions. COSMOS reconstructions from non-ideal rotations about a single axis required additional L2-regularization to mitigate residual streaking artifacts. CONCLUSION: In view of unconsidered anisotropy effects, added complexity of the reconstruction, and the general challenge of multi-orientation acquisitions, advantages of sub-optimal COSMOS schemes over regularized single-orientation QSM appear limited in in-vivo settings.


Subject(s)
Algorithms , Artifacts , Brain , Image Processing, Computer-Assisted , Magnetic Resonance Imaging , Anisotropy , Brain/diagnostic imaging , Animals , Magnetic Resonance Imaging/methods , Image Processing, Computer-Assisted/methods , Pan troglodytes , Brain Mapping/methods , White Matter/diagnostic imaging , Nonlinear Dynamics , Reproducibility of Results
15.
Materials (Basel) ; 17(8)2024 Apr 10.
Article in English | MEDLINE | ID: mdl-38673100

ABSTRACT

The multifaceted inductive technique of AC magnetic susceptibility (ACMS) provides versatile and reliable means for the investigation of the respective properties of magnetic and superconducting materials. Here, we explore, both mathematically and experimentally, the ACMS set-up, based on four coaxial pick-up coils assembled in the second-derivative configuration, when employed in the investigation of differently shaped superconducting specimens of poly-crystalline YBa2Cu3O7-δ and Bi2-xPbxSr2Ca2Cu3O10+y and single-crystalline YBa2Cu3O7-δ. Through the mathematical modeling of both the ACMS set-up and of linearly responding superconducting specimens, we obtain a closed-form relation for the DC voltage output signal. The latter is translated directly to the so-called extrinsic ACMS of the studied specimen. By taking into account the specific characteristics of the studied high-Tc specimens (such as the shape and dimensions for the demagnetizing effect, porosity for the estimation of the superconducting volume fraction, etc.), we eventually draw the truly intrinsic ACMS of the parent material. Importantly, this is carried out without the need for any calibration specimen. The comparison of the mathematical modeling with the experimental data of the aforementioned superconducting specimens evidences fair agreement.

16.
Trends Biotechnol ; 2024 Apr 24.
Article in English | MEDLINE | ID: mdl-38664141

ABSTRACT

The field of biofabrication is rapidly expanding with the advent of new technologies and material systems to engineer complex tissues. In this opinion article, we introduce an emerging tissue patterning method, physical-property-based patterning, that has strong translational potential given its simplicity and limited dependence on external hardware. Physical-property-based patterning relies solely on the intrinsic density, magnetic susceptibility, or compressibility of an object, its surrounding solution, and the noncontact application of a remote field. We discuss how physical properties can be exploited to pattern objects and design a variety of biologic tissues. Finally, we pose several open questions that, if addressed, could transform the status quo of biofabrication, pushing us one step closer to patterning tissues in situ.

17.
Magn Reson Med ; 92(1): 269-288, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38520259

ABSTRACT

PURPOSE: To determine whether the spatial scale and magnetic susceptibility of microstructure can be evaluated robustly from the decay of gradient-echo and spin-echo signals. THEORY AND METHODS: Gradient-echo and spin-echo images were acquired from suspensions of spherical polystyrene microbeads of 10, 20, and 40 µm nominal diameter. The sizes of the beads and their magnetic susceptibility relative to the medium were estimated from the signal decay curves, using a lookup table generated from Monte Carlo simulations and an analytic model based on the Gaussian phase approximation. RESULTS: Fitting Monte Carlo predictions to spin-echo data yielded acceptable estimates of microstructural parameters for the 20 and 40 µm microbeads. Using gradient-echo data, the Monte Carlo lookup table provided satisfactory parameter estimates for the 20 µm beads but unstable results for the diameter of the largest beads. Neither spin-echo nor gradient-echo data allowed accurate parameter estimation for the smallest beads. The analytic model performed poorly over all bead sizes. CONCLUSIONS: Microstructural sources of magnetic susceptibility produce distinctive non-exponential signatures in the decay of gradient-echo and spin-echo signals. However, inverting the problem to extract microstructural parameters from the signals is nontrivial and, in certain regimes, ill-conditioned. For microstructure with small characteristic length scales, parameter estimation is hampered by the difficulty of acquiring accurate data at very short echo times. For microstructure with large characteristic lengths, the gradient-echo signal approaches the static-dephasing regime, where it becomes insensitive to size. Applicability of the analytic model was further limited by failure of the Gaussian phase approximation for all but the smallest beads.


Subject(s)
Algorithms , Echo-Planar Imaging/methods , Reproducibility of Results , Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Sensitivity and Specificity , Image Enhancement/methods , Monte Carlo Method , Computer Simulation
18.
NMR Biomed ; 37(8): e5150, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38553824

ABSTRACT

Magnetic susceptibility imaging may provide valuable information about chemical composition and microstructural organization of tissue. However, its estimation from the MRI signal phase is particularly difficult as it is sensitive to magnetic tissue properties ranging from the molecular to the macroscopic scale. The MRI Larmor frequency shift measured in white matter (WM) tissue depends on the myelinated axons and other magnetizable sources such as iron-filled ferritin. We have previously derived the Larmor frequency shift arising from a dense medium of cylinders with scalar susceptibility and arbitrary orientation dispersion. Here, we extend our model to include microscopic WM susceptibility anisotropy as well as spherical inclusions with scalar susceptibility to represent subcellular structures, biologically stored iron, and so forth. We validate our analytical results with computer simulations and investigate the feasibility of estimating susceptibility using simple iterative linear least squares without regularization or preconditioning. This is done in a digital brain phantom synthesized from diffusion MRI measurements of an ex vivo mouse brain at ultra-high field.


Subject(s)
Phantoms, Imaging , White Matter , White Matter/diagnostic imaging , Animals , Mice , Computer Simulation , Magnetic Resonance Imaging , Anisotropy
19.
Heliyon ; 10(6): e27497, 2024 Mar 30.
Article in English | MEDLINE | ID: mdl-38524623

ABSTRACT

The Inner Ambon Bay (IAB) is an important area for the economic development of the city of Ambon, one of only a few urban areas in eastern Indonesia. This study is intended to monitor the anthropogenic impact on IAB by employing combined rock magnetic and geochemical analyses on 20 samples collected from IAB and the surrounding rivers. Magnetic susceptibility values of samples in the IAB averaged 26.37× 10-8 m3/kg, which is relatively high and comparable to that of contaminated coastal environments. Magnetic susceptibility correlated positively with certain metals such as Cr, Co, Ni, and Mn but negatively with Hg. Geochemical analyses showed that Hg and Ag contents were relatively high but pose only moderate risk to the environment based on the geo-accumulation index. Furthermore, the potential ecological risk index (PERI) showed that there were two points that showed moderate ecological risk. Multivariate statistical analysis (principal component analysis (PCA), Pearson's correlation coefficient (PCC), and hierarchical cluster analysis (HCA)) outlined that the metallic accumulation in the sediments of IAB was related to lithological, geological, and anthropogenic impacts. Therefore, oil spills and household waste are likely major reasons for anthropogenic pollution in the sediments of the IAB.

20.
Environ Sci Pollut Res Int ; 31(11): 16613-16628, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38321282

ABSTRACT

This research is focused on the assessment of the pollution status of river and lake sediments near Pb, Zn, and Cu mines and tailings in the southeastern part of Serbia-Krajiste area. The study is based on hypothesis that investigated rivers and lakes in the Krajiste area could be polluted by potentially toxic elements (PTEs) and that these elements could pose considerable ecological risk to the studied surface water environment. High PTE contents are detected in studied river sediments (up to 7892 mg kg-1 for Zn, 3224 mg kg-1 for Cu, 36,790 mg kg-1 for Pb, 64.2 mg kg-1 for Cd, and 1444 mg kg-1 for As). Given that the contents of the studied elements in most of the river sediments exceeded the background values, values prescribed by regulations of the Republic of Serbia, as well as probable effect concentration (PEL), it is possible to conclude that sediments were heavily polluted and that detrimental effects can be expected. Contamination indices including the enrichment factor (EF), contamination factor (CF), index of geoaccumulation (Igeo), potential ecological risk index (Eri), ecological risk index (RI), pollution load index (PLI), and aggregative toxicity index (ATI) were used to assess the degree of pollution by PTEs. The ecological risk assessment revealed that there is a significant risk observed for toxic elements (primarily Pb, Cu, Cd, and As) at this moment. The highest contamination indices (EF, Igeo, CF, PLI, and ATI) are mainly associated with historical and current mining activities. The Monte Carlo analysis based on the risk assessment indices was used to evaluate the uncertainty. The most pronounced toxic risk is found for the Pb, Cu, Cd, and As which assessment was in the range of high and extremely high-risk probabilities. The obtained results suggest that levels of toxic elements pose a significant ecological risk to the surface water environment near Pb, Zn, and Cu mines in the Krajiste area. The methodology applied in this paper could be very useful for other researchers dealing with the problem of environmental pollution by toxic elements.


Subject(s)
Metals, Heavy , Water Pollutants, Chemical , Metals, Heavy/analysis , Environmental Monitoring , Water Pollutants, Chemical/analysis , Cadmium/analysis , Lead/analysis , Geologic Sediments , Environmental Pollution/analysis , Risk Assessment , Rivers , Water/analysis , China
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