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1.
IMA Fungus ; 15(1): 13, 2024 Jun 07.
Article in English | MEDLINE | ID: mdl-38849861

ABSTRACT

The Terminal Fusarium Clade (TFC) is a group in the Nectriaceae family with agricultural and clinical relevance. In recent years, various phylogenies have been presented in the literature, showing disagreement in the topologies, but only a few studies have conducted analyses on the divergence time scale of the group. Therefore, the evolutionary history of this group is still being determined. This study aimed to understand the evolutionary history of the TFC from a phylogenomic perspective. To achieve this objective, we performed a phylogenomic analysis using the available genomes in GenBank and ran eight different pipelines. We presented a new robust topology of the TFC that differs at some nodes from previous studies. These new relationships allowed us to formulate new hypotheses about the evolutionary history of the TFC. We also inferred new divergence time estimates, which differ from those of previous studies due to topology discordances and taxon sampling. The results suggested an important diversification process in the Neogene period, likely associated with the diversification and predominance of terrestrial ecosystems by angiosperms. In conclusion, we presented a robust time-scale phylogeny that allowed us to formulate new hypotheses regarding the evolutionary history of the TFC.

2.
Anat Rec (Hoboken) ; 306(6): 1548-1557, 2023 06.
Article in English | MEDLINE | ID: mdl-36114630

ABSTRACT

Previously, only one small-sized species of Testudinidae (Chelonoidis gringorum) was named from Lower-Middle Miocene of Central Patagonia. In this short article, we describe a new large Testudinidae, here named Chelonoidis meridiana sp. nov. This large new species (carapace up to 80 cm) differs from other large species of the southern South American fossil record by the absence of gibbosities on neural and costal carapacial bones, a short and wide entoplastron with a humeropectoral sulcus that was placed well behind its posterior end, and pectoral scutes that are medially longer, approximately one-third of the medial length of the hyoplastra. The discovery of this new species in the Middle Miocene increases the raw turtle diversity in Chubut, permitting to reduce the gap between the raw and phylogenetic diversity previously proposed. This occurrence is also important from both a temporal and geographic point of view. It permits fixing the presence of large-sized tortoises in the continent since ~15 million years ago (Middle Miocene). This occurrence predates all other large and giant tortoises from Argentina and South America and it is older than the giant Chelonoidis from the Langhian-Tortonian of Colombia. This is also the southernmost occurrence of a large-sized testudinid in the world.


Subject(s)
Turtles , Animals , Phylogeny , Argentina , Turtles/anatomy & histology , South America , Fossils , Ribs
3.
Anat Rec (Hoboken) ; 2022 Dec 28.
Article in English | MEDLINE | ID: mdl-36576217

ABSTRACT

We report new occurrences of Testudinidae and Chelidae from 11 different fossil sites in the Huayquerías and Tunuyán formations (late Miocene-Pliocene) in the Huayquerías del Este, Mendoza, Argentina. A total of 36 specimens were collected, representing at least three taxa from two different clades: 80.6% Testudinidae and 19.4% Chelidae. Testudinids are present throughout the stratigraphic succession, in alluvial, fluvial, and interdune sedimentary environments, represented by dorsal and plastron carapace plates, with some remains of the appendicular skeleton. A complete articulated plastron with some peripheral plates of the carapace was also recognized and is assigned to the extant species Chelonoidis chilensis, representing the oldest record for this taxon (late Miocene, Messinian). Another possible morphotype was recognized in the form of a large scapular girdle and femur that likely corresponded to an individual with a dorsal carapace of about 80 cm. This assemblage of small and large tortoise species is recognized for first time in the Messinian Age/Stage of Mendoza. Chelids are mostly restricted to fluvial deposits in the upper part of the Huayquerías Formation, except for two specimens which appear in the lower part. One specimen is represented by a right half plastron of an indeterminate Chelidae species which could correspond to a carapace of up to 24 cm in length with plastral lobes narrower than those observed in Phrynops species. Another specimen is characterized by a large costovertebral tunnel in the carapace, peripheral plates of the posterior margin of the carapace with ornamentation of fine grooves forming irregular polygons.

4.
Swiss J Palaeontol ; 140(1): 9, 2021.
Article in English | MEDLINE | ID: mdl-34721281

ABSTRACT

The Pliocene-Pleistocene transition in the Neotropics is poorly understood despite the major climatic changes that occurred at the onset of the Quaternary. The San Gregorio Formation, the younger unit of the Urumaco Sequence, preserves a fauna that documents this critical transition. We report stingrays, freshwater bony fishes, amphibians, crocodiles, lizards, snakes, aquatic and terrestrial turtles, and mammals. A total of 49 taxa are reported from the Vergel Member (late Pliocene) and nine taxa from the Cocuiza Member (Early Pleistocene), with 28 and 18 taxa reported for the first time in the Urumaco sequence and Venezuela, respectively. Our findings include the first fossil record of the freshwater fishes Megaleporinus, Schizodon, Amblydoras, Scorpiodoras, and the pipesnake Anilius scytale, all from Pliocene strata. The late Pliocene and Early Pleistocene ages proposed here for the Vergel and Cocuiza members, respectively, are supported by their stratigraphic position, palynology, nannoplankton, and 86Sr/88Sr dating. Mammals from the Vergel Member are associated with the first major pulse of the Great American Biotic Interchange. In contrast to the dry conditions prevailing today, the San Gregorio Formation documents mixed open grassland/forest areas surrounding permanent freshwater systems, following the isolation of the northern South American basin from western Amazonia. These findings support the hypothesis that range contraction of many taxa to their current distribution in northern South America occurred rapidly during at least the last 1.5 million years.

5.
Rev. biol. trop ; Rev. biol. trop;69(supl. 2)mar. 2021.
Article in English | LILACS, SaludCR | ID: biblio-1507756

ABSTRACT

Introduction: Scutelliforms were diverse and widespread in shallow marine environments during Neogene times in South America. Nevertheless, they have almost never been used as biostratigraphic tools. Objective: To provide a refined stratigraphic frame useful for calibrating temporal dimensions of scutelliform diversity from Argentina and Uruguay and its correlation with the molluscan assemblages previously proposed. Methods: A detailed survey of their geographic and stratigraphic provenance was carried out. We revised both the bibliography and collections (institutional and from our own field work). Results: The group is represented by 14 species belonging to six genera, and four assemblages were identified. Numerical dates of the Neogene marine rocks obtained recently allowed their placement in a chronological scheme: "Iheringiella" sp. A is restricted to the late Oligocene, the genera Camachoaster and "Eoscutella" and the species Monophoraster telfordi to the early Miocene, Abertella gualichensis and Abertella miskellyi to the middle Miocene, and Monophoraster duboisi, Amplaster coloniensis and Amplaster ellipticus to the late Miocene. Non-lunulate scutelliforms are not restricted to the late Oligocene as previously supposed. The oldest occurrence of the genus Monophoraster corresponds to the early Miocene, and along with Iheringiella are long-living taxa that embrace the 25.3 Ma-18.1 Ma (Iheringiella patagonensis) and approximately 15 Ma-6.48 Ma (Monophoraster darwini) intervals. The presence of Iheringiella in the early Miocene of northeastern Patagonia is corroborated, reaching there its northernmost distribution. Monophoraster darwini has a temporal range from the late Miocene (where it was previously thought to be restricted) back to the middle Miocene, since this is the species yielded in the well-known and discussed "Monophoraster and Venericor Beds". Conclusions: The Paleogene-Neogene scutelliforms of Argentina and Uruguay range from the late Oligocene to the late Miocene. There is a good correspondence among the numerical ages, molluscan biozones and scutelliform assemblages.


Introducción: Realizamos una síntesis actualizada de la composición taxonómica de las asociaciones de escutélidos del Oligoceno tardío-Mioceno tardío de Argentina y Uruguay. Objetivo: Ubicar los escutélidos en un marco estratigráfico refinado, a los efectos de observar su diversidad a lo largo del tiempo y la correlación de sus ensambles con los ya conocidos de moluscos. Métodos: Revisamos en detalle la procedencia geográfica y estratigráfica de los ejemplares y su asignación taxonómica, basándonos tanto en la bibliografía como en colecciones institucionales y producto de nuestras campañas de colecta. Resultados: El grupo está representado por 14 especies agrupadas en seis géneros, siendo identificadas en cuatro ensambles. Las edades numéricas recientemente obtenidas permitieron su ubicación en un esquema cronológico: "Iheringiella" sp. A se restringe al Oligoceno tardío, Camachoaster y "Eoscutella", y Monophoraster telfordi al Mioceno temprano, Abertella gualichensis y Abertella miskellyi al Mioceno medio, y Monophoraster duboisi, Amplaster coloniensis y Amplaster ellipticus al Mioceno tardío. Los escutélidos sin lúnula no están restringidos al Oligoceno tardío como se suponía. Monophoraster aparece en el Mioceno temprano y junto con Iheringiella abarcan largos períodos de tiempo, encontrándoselos entre los 25.3 Ma-18.1 Ma (Iheringiella patagonensis) y aproximadamente los 15 Ma-6.48 Ma (Monophoraster darwini). Se corrobora la presencia de Iheringiella en el Mioceno temprano del noreste de Patagonia, donde alcanza su punto más septentrional. Monophoraster darwini se encuentra desde el Mioceno medio hasta el Mioceno tardío (lapso para el cual previamente se consideraba restringido), ya que se trata de la especie presente en los bien conocidos "estratos con Monophoraster y Venericor". Conclusiones: Los escutélidos del Paleógeno-Neógeno de Argentina y Uruguay se encuentran desde el Oligoceno tardío hasta el Mioceno tardío. Hay una buena correspondencia entre las edades numéricas, las biozonas de moluscos y los ensambles de escutélidos.


Subject(s)
Animals , Sea Urchins/anatomy & histology , Sea Urchins/classification , Argentina , Uruguay , Biodiversity , Echinodermata/classification
6.
J Anat ; 239(1): 151-166, 2021 07.
Article in English | MEDLINE | ID: mdl-33576081

ABSTRACT

Spheniscus urbinai represents one of four extinct Spheniscus species from the Cenozoic of southern South America, known from several poorly described diversely complete skulls and postcranial elements. Here, we present a review of the cranial osteology of all known specimens (collected in Argentina, Chile, and Peru), including a paleoneurological analysis using CT scans, and an exploration of its cranial pneumaticity compared to other extinct and living seabirds. Our results show that among Spheniscus species, S. urbinai exhibits slightly greater cranial pneumaticity than the living species. Additionally, we confirm previous findings which indicate that the marked reduction of cranial pneumaticity-which is characteristic of living penguins-occurred early during the Eocene (as observed in the Antarctic penguin MLP 12-I-20-1, but not in the coeval Anthropornis).


Subject(s)
Brain/anatomy & histology , Paranasal Sinuses/anatomy & histology , Skull/anatomy & histology , Spheniscidae/anatomy & histology , Animals , Paranasal Sinuses/diagnostic imaging , Skull/diagnostic imaging , Tomography, X-Ray Computed
7.
Sci Total Environ ; 754: 142247, 2021 Feb 01.
Article in English | MEDLINE | ID: mdl-33254952

ABSTRACT

Carbon and oxygen isotopes (δ13C and δ18O) in tree rings are widely used to reconstruct palaeoclimate variables such as temperature during the Holocene (12 thousand years ago - present), and are used increasingly in deeper time. However, their use is largely restricted to arboreal trees, which excludes potentially important data from prostrate trees and shrubs, which grow in high latitude and altitude end-member environments. Here, we calibrate the use of δ13C and δ18O as climatic archives in two modern species of southern beech (Nothofagus) from Tierra del Fuego, Chile, at the southern limit of their current range. We show that prostrate trees are potentially suitable archives for recording climatological means over longer periods (on the order of decades), which opens up these important environments for tree ring isotope analysis. We then apply our new understanding to a remarkable late Neogene (17-2.5 Ma) fossil Nothofagus assemblage from the Transantarctic Mountains, Antarctica, representative of a prostrate tundra shrub growing during a period of significant ice sheet retreat. The δ13C of the fossil cellulose was found to be ~4‰ enriched relative to that of the modern tress. This is likely to be due to a combination of a more positive δ13C of contemporaneous atmospheric CO2 and enhanced water use efficiency at the fossil site. Using the cellulose-δ18O in the fossil wood, we are able to reconstruct precipitation oxygen isotopes over the Antarctic interior for the first time for this time period. The results show that δ18Oprecip over Antarctica was -16.0 ± 4.2‰, around 12‰ enriched relative to today, suggesting changes in the hydrological cycle linked to warmer temperatures and a smaller ice sheet.


Subject(s)
Cellulose , Fossils , Antarctic Regions , Calibration , Carbon Isotopes/analysis , Chile , Oxygen Isotopes/analysis
8.
Zootaxa ; 4894(4): zootaxa.4894.4.5, 2020 Dec 11.
Article in English | MEDLINE | ID: mdl-33311064

ABSTRACT

The Solimões Formation (Eocene-Pliocene) is a well-known geological unit due to the great diversity of crocodylian species. Here we describe a new species of Melanosuchus, M. latrubessei sp. nov., from the Talismã locality, state of Amazonas, from the Upper Miocene of the Solimões Formation (Solimões Basin, Brazil). A new phylogenetic inference focused on Caimaninae is provided and the different evolutionary scenarios involving this new species are discussed. In addition, quantitative morphology studies are carried out and comments regarding the paleoecology aspects of this new species are made. M. latrubessei represents a medium-sized generalist predator, being proportional to the medium-sized M. niger. This new species inhabited the drainages of the Solimões Formation and was ecologically related to other taxa of crocodylians during the proto-Amazon Miocene. The evolutionary advantages of Melanosuchus genus are discussed to better understand the biogeographical occurrence of M. niger in South America, a species which survives to this day in contrast to several other species that became extinct during the Miocene-Pliocene periods. The extinction of the Miocene-Pliocene crocodylian taxa of the Solimões Formation, including Melanosuchus latrubessei, seems to be directly related with the uplift of the northern portions of the Andes, which generated significantly changes in drainages and Amazon paleoenvironments.


Subject(s)
Reptiles , Animals , Brazil , Phylogeny
9.
J Hum Evol ; 146: 102835, 2020 09.
Article in English | MEDLINE | ID: mdl-32652341

ABSTRACT

The Honda Group of La Venta, Colombia, has yielded a wide array of crown platyrrhine primates, documenting the late Middle Miocene epoch (ca. 13.1-12.6 Ma, Laventan South American Land Mammal Age). Although exceptional, this record represents only a snapshot of the evolutionary history of New World monkeys because virtually none of the primate taxa recorded at La Venta had so far been found elsewhere. We describe here few dental remains of a cebine platyrrhine discovered from Laventan deposits in the San Martín Department of Peru (Peruvian Amazonia). The primate dental specimens from that new fossil-bearing locality (TAR-31) are strongly reminiscent morphologically of the teeth of Neosaimiri fieldsi from La Venta. However, given that several aspects of the dental variability from TAR-31 are unknown, we prefer to provide an assignment with open nomenclature (i.e., N. cf. fieldsi), instead of formally referring these remains to N. fieldsi, pending the discovery of additional specimens. The occurrence of Neosaimiri in Peru, in coeval deposits of La Venta, thus represents a second and southernmost record of that low-latitude genus in the Neotropics, thereby demonstrating its wide distribution along the northwestern edge of the Pebas Mega-Wetland System, in tropical western South America.


Subject(s)
Animal Distribution , Fossils , Saimirinae , Animals , Fossils/anatomy & histology , Peru , Saimirinae/anatomy & histology , Tooth/anatomy & histology
10.
PeerJ ; 8: e9051, 2020.
Article in English | MEDLINE | ID: mdl-32391203

ABSTRACT

The occurrence and diversity of elasmobranchs from the Oligocene-Miocene boundary from Tropical America is poorly known in comparison with the paleodiversity from younger Neogene intervals of the region. Here we describe a new elasmobranch assemblage from the rich fossil site of Montañita-Olón (Dos Bocas Formation, Santa Elena, Ecuador), where other vertebrates have already been described: for example, sea turtles and cetaceans. We report a total of 27 elasmobranch taxa, 19 of which are new fossil records for Ecuador, 10 new records for the Central Eastern Pacific and four new records for South America. Additionally, in order to reconstruct the environment where these marine remains were deposited, we performed abundance, paleobathymetric and habitat preference analyses, concluding that they were likely deposited in an outer neritic (open shelf) environment. The study of Oligocene and early Miocene marine elasmobranchs faunas in Tropical America is key to addressing the issues in the evolutionary history of this group.

11.
PeerJ ; 6: e5766, 2018.
Article in English | MEDLINE | ID: mdl-30356960

ABSTRACT

A representative outcrop of the Messinian stromatolites belonging to the Terminal Carbonate Complex unit, from the northern sector of the Bajo Segura basin (Caja de Ahorros del Mediterraneo section, Sierra del Colmenar, SE Spain) has been studied. Here, we present a detailed analysis of the architecture, external morphology, and internal morphology in order to reconstruct the environmental and palaeoecological conditions for their growth. The stromatolites macrostructure consists of a continuously doming type morphology (build up and sheets areas). These developed close to the coast and acted as a palaeogeographic barrier, reducing physical stress, channeling the erosive effect of water and favoring restricted conditions. This stromatolitic macrostructure exhibits variations in its internal morphology, giving rise to seven subfacies, which are a product of the environmental changes experienced during the growth of the microbial mats. Although broadly suggesting a coastal environment, restricted and shallow during formation, the variation in internal morphology (mesostructure and microstructure) is evidence of minor changes in the physical environment that indicate a progressive shallowing.

12.
J Morphol ; 279(2): 259-273, 2018 02.
Article in English | MEDLINE | ID: mdl-29139133

ABSTRACT

Melanosuchus niger (Crocodylia, Alligatoroidea) is one of the six living caimanine species widely distributed throughout the Amazon River basin today. Although there is only one extant species of Melanosuchus, fossil material assigned to this genus, represented by M. fisheri, has been reported from the late Miocene in South America. However, the validity of this taxon has been questioned and a recent investigation indicates that the referred specimen of M. fisheri (MCZ 4336) actually belongs to Globidentosuchus brachyrostris, while those diagnostic characters present in the holotype (MCNC 243) fall into the spectrum of intraspecific variation of M. niger. Here, we compare the skull shape of the holotype of M. fisheri with the ontogenetic series of the four jacarean species (M. niger, Caiman yacare, Caiman crocodilus, and Caiman latirostris) using 2D-geometric morphometric analyses in two different views. The analyses indicate that MCNC 243 falls into the morphospace of M. niger and C. latirostris. Despite strong shape similarities between juveniles of C. latirostris and MCNC 243, further anatomical comparisons reveal notable differences between them. In contrast, no concrete anatomical differences can be found between MCNC 243 and M. niger, although shape analyses indicate that MCNC 243 is relatively robust for its size. Thus, this study is able to confirm that the genus Melanosuchus was present in the late Miocene, but it still remains unclear if MCNC 243 should be treated as a junior synonym or probably a sister species of M. niger. Its Miocene age favors the second option, but as the shape analyses were also not able to extract any diagnostic characters, it should be retained as Melanosuchus cf. niger.


Subject(s)
Alligators and Crocodiles/anatomy & histology , Alligators and Crocodiles/classification , Extinction, Biological , Skull/anatomy & histology , Animals , Principal Component Analysis , Regression Analysis , South America
13.
Zootaxa ; 4338(1): 51-84, 2017 Oct 24.
Article in English | MEDLINE | ID: mdl-29245727

ABSTRACT

The systematics of the Family Carditidae is currently poorly elucidated. This paper reviews the Eocene to Pleistocene carditids from Patagonia and Entre Ríos Province (Argentina). Twelve species are described and illustrated and the presence of the genera Cyclocardia Conrad, Pleuromeris Conrad, Scalaricardita Sacco, Fasciculicardia Maxwell and Purpurocardia Maxwell in southern South America is discussed. The genus Scalaricardita is documented for the first time in South America. Two new genera, Darwinicardia gen. nov. and Kolmeris n. gen. are proposed for the species 'Venericardia' patagonica (Sowerby) and 'V.' tehuelchana (Ihering), respectively, and one new species, Cyclocardia dalek sp. nov., is described.


Subject(s)
Bivalvia , Animals , Argentina , South America
14.
PeerJ ; 5: e4148, 2017.
Article in English | MEDLINE | ID: mdl-29302389

ABSTRACT

Balaenidae (right and bowhead whales) are a key group in understanding baleen whale evolution, because they are the oldest surviving lineage of crown Mysticeti, with a fossil record that dates back ∼20 million years. However, this record is mostly Pliocene and younger, with most of the Miocene history of the clade remaining practically unknown. The earliest recognized balaenid is the early Miocene Morenocetus parvus Cabrera, 1926 from Argentina. M. parvus was originally briefly described from two incomplete crania, a mandible and some cervical vertebrae collected from the lower Miocene Gaiman Formation of Patagonia. Since then it has not been revised, thus remaining a frequently cited yet enigmatic fossil cetacean with great potential for shedding light on the early history of crown Mysticeti. Here we provide a detailed morphological description of this taxon and revisit its phylogenetic position. The phylogenetic analysis recovered the middle Miocene Peripolocetus as the earliest diverging balaenid, and Morenocetus as the sister taxon of all other balaenids. The analysis of cranial and periotic morphology of Morenocetus suggest that some of the specialized morphological traits of modern balaenids were acquired by the early Miocene and have remained essentially unchanged up to the present. Throughout balaenid evolution, morphological changes in skull arching and ventral displacement of the orbits appear to be coupled and functionally linked to mitigating a reduction of the field of vision. The body length of Morenocetus and other extinct balaenids was estimated and the evolution of body size in Balaenidae was reconstructed. Optimization of body length on our phylogeny of Balaenidae suggests that the primitive condition was a relatively small body length represented by Morenocetus, and that gigantism has been acquired independently at least twice (in Balaena mysticetus and Eubalaena spp.), with the earliest occurrence of this trait in the late Miocene-early Pliocene as represented by Eubalaena shinshuensis.

15.
PeerJ ; 4: e2696, 2016.
Article in English | MEDLINE | ID: mdl-27896030

ABSTRACT

BACKGROUND: Cloud forests, characterized by a persistent, frequent or seasonal low-level cloud cover and fragmented distribution, are one of the most threatened habitats, especially in the Neotropics. Tree ferns are among the most conspicuous elements in these forests, and ferns are restricted to regions in which minimum temperatures rarely drop below freezing and rainfall is high and evenly distributed around the year. Current phylogeographic data suggest that some of the cloud forest-adapted species remained in situ or expanded to the lowlands during glacial cycles and contracted allopatrically during the interglacials. Although the observed genetic signals of population size changes of cloud forest-adapted species including tree ferns correspond to predicted changes by Pleistocene climate change dynamics, the observed patterns of intraspecific lineage divergence showed temporal incongruence. METHODS: Here we combined phylogenetic analyses, ancestral area reconstruction, and divergence time estimates with climatic and altitudinal data (environmental space) for phenotypic traits of tree fern species to make inferences about evolutionary processes in deep time. We used phylogenetic Bayesian inference and geographic and altitudinal distribution of tree ferns to investigate ancestral area and elevation and environmental preferences of Mesoamerican tree ferns. The phylogeny was then used to estimate divergence times and ask whether the ancestral area and elevation and environmental shifts were linked to climatic events and historical climatic preferences. RESULTS: Bayesian trees retrieved Cyathea, Alsophyla, Gymnosphaera and Sphaeropteris in monophyletic clades. Splits for species in these genera found in Mesoamerican cloud forests are recent, from the Neogene to the Quaternary, Australia was identified as the ancestral area for the clades of these genera, except for Gymnosphaera that was Mesoamerica. Climate tolerance was not divergent from hypothesized ancestors for the most significant variables or elevation. For elevational shifts, we found repeated change from low to high elevations. CONCLUSIONS: Our data suggest that representatives of Cyatheaceae main lineages migrated from Australia to Mesoamerican cloud forests in different times and have persisted in these environmentally unstable areas but extant species diverged recentrly from their ancestors.

16.
PeerJ ; 4: e2479, 2016.
Article in English | MEDLINE | ID: mdl-27688973

ABSTRACT

The Ziphiidae (beaked whales) represent a large group of open-ocean odontocetes (toothed cetaceans), whose elusive and deep diving behavior prevents direct observation in their natural habitat. Despite their generally large body size, broad geographical distribution, and high species number, ziphiids thus remain poorly known. Furthermore, the evolutionary processes that have led to their extreme adaptations and impressive extant diversity are still poorly understood. Here we report new fossil beaked whales from the late Miocene of the Pisco Formation (southern Peru). The best preserved remains here described are referred to two new genera and species, the Messinian Chavinziphius maxillocristatus and the Tortonian Chimuziphius coloradensis, based on skull remains from two marine vertebrate-rich localities: Cerro Los Quesos and Cerro Colorado, respectively. C. maxillocristatus is medium sized retains a complete set of functional lower teeth, and bears robust rostral maxillary crests similar to those of the extant Berardius. By contrast, C. coloradensis is small and characterized by large triangular nasals and moderately thickened premaxillae that dorsally close the mesorostral groove. Both species confirm the high past diversity of Ziphiidae, the richest cetacean family in terms of the number of genera and species. Our new phylogenetic and biogeographical analyses depart markedly from earlier studies in dividing beaked whales into two major clades: the Messapicetus clade, which, along with other stem ziphiids, once dominated the southeastern Pacific and North Atlantic; and crown Ziphiidae, the majority of which are found in deep-water regions of the Southern Ocean, with possible subsequent dispersal both globally (Mesoplodon and Ziphius) and to the cooler waters of the northern oceans (Berardius and Hyperoodon). Despite this relatively clear separation, both lineages seem to follow similar evolutionary trends, including (1) a progressive reduction of dentition; (2) an increase in the compactness and thickness of the rostral bones; (3) similar changes in facial morphology (e.g., elevation of the vertex); and (4) an increase of body size. We suggest that these trends may be linked to a convergent ecological shift to deep diving and suction feeding.

17.
Evolution ; 70(7): 1638-50, 2016 07.
Article in English | MEDLINE | ID: mdl-27240554

ABSTRACT

Different diversification scenarios have been proposed to explain the origin of extant biodiversity. However, most existing meta-analyses of time-calibrated phylogenies rely on approaches that do not quantitatively test alternative diversification processes. Here, I highlight the shortcomings of using species divergence ranks, which is a method widely used in meta-analyses. Divergence ranks consist of categorizing cladogenetic events to certain periods of time, typically to either Pleistocene or to pre-Pleistocene ages. This approach has been claimed to shed light on the origin of most extant species and the timing and dynamics of diversification in any biogeographical region. However, interpretations drawn from such method often confound two fundamental questions in macroevolutionary studies, tempo (timing of evolutionary rate shifts) and mode ("how" and "why" of speciation). By using simulated phylogenies under four diversification scenarios, constant-rate, diversity-dependence, high extinction, and high speciation rates in the Pleistocene, I showed that interpretations based on species divergence ranks might have been seriously misleading. Future meta-analyses of dated phylogenies need to be aware of the impacts of incomplete taxonomic sampling, tree topology, and divergence time uncertainties, as well as they might be benefited by including quantitative tests of alternative diversification models that acknowledge extinction and diversity dependence.


Subject(s)
Biodiversity , Biological Evolution , Butterflies/physiology , Computer Simulation , Animals , Central America , Extinction, Biological , Genetic Speciation , Mexico , Phylogeny , South America
18.
PeerJ ; 3: e1227, 2015.
Article in English | MEDLINE | ID: mdl-26355720

ABSTRACT

In contrast to dominant mode of ecological transition in the evolution of marine mammals, different lineages of toothed whales (Odontoceti) have repeatedly invaded freshwater ecosystems during the Cenozoic era. The so-called 'river dolphins' are now recognized as independent lineages that converged on similar morphological specializations (e.g., longirostry). In South America, the two endemic 'river dolphin' lineages form a clade (Inioidea), with closely related fossil inioids from marine rock units in the South Pacific and North Atlantic oceans. Here we describe a new genus and species of fossil inioid, Isthminia panamensis, gen. et sp. nov. from the late Miocene of Panama. The type and only known specimen consists of a partial skull, mandibles, isolated teeth, a right scapula, and carpal elements recovered from the Piña Facies of the Chagres Formation, along the Caribbean coast of Panama. Sedimentological and associated fauna from the Piña Facies point to fully marine conditions with high planktonic productivity about 6.1-5.8 million years ago (Messinian), pre-dating the final closure of the Isthmus of Panama. Along with ecomorphological data, we propose that Isthminia was primarily a marine inhabitant, similar to modern oceanic delphinoids. Phylogenetic analysis of fossil and living inioids, including new codings for Ischyrorhynchus, an enigmatic taxon from the late Miocene of Argentina, places Isthminia as the sister taxon to Inia, in a broader clade that includes Ischyrorhynchus and Meherrinia, a North American fossil inioid. This phylogenetic hypothesis complicates the possible scenarios for the freshwater invasion of the Amazon River system by stem relatives of Inia, but it remains consistent with a broader marine ancestry for Inioidea. Based on the fossil record of this group, along with Isthminia, we propose that a marine ancestor of Inia invaded Amazonia during late Miocene eustatic sea-level highs.

19.
Zookeys ; (426): 119-27, 2014.
Article in English | MEDLINE | ID: mdl-25147461

ABSTRACT

A new species of the scelionine genus Macroteleia Westwood (Platygastridae s.l., Scelioninae) is described and figured from a female beautifully preserved in Middle Miocene amber from Peru. Macroteleia yaguarum Perrichot & Engel, sp. n., shows a unique combination of characters otherwise seen independently within its congeners. It is most similar to the modern M. surfacei Brues, but differs from it by the non-foveolate notauli, the contiguous punctures of the vertex, and the continuous propodeum. The new species is the first New World fossil of the genus, suggesting a Cretaceous origin for the group and a relatively old age of the South American, tropical African, and Australian faunas, and a younger age of the modern Holarctic faunas.

20.
Mol Phylogenet Evol ; 71: 1-14, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24140980

ABSTRACT

Eight current species of snakes of the Bothrops neuwiedi group are widespread in South American open biomes from northeastern Brazil to southeastern Argentina. In this paper, 140 samples from 93 different localities were used to investigate species boundaries and to provide a hypothesis of phylogenetic relationships among the members of this group based on 1122bp of cyt b and ND4 from mitochondrial DNA and also investigate the patterns and processes occurring in the evolutionary history of the group. Combined data recovered the B. neuwiedi group as a highly supported monophyletic group in maximum parsimony, maximum likelihood and Bayesian analyses, as well as four major clades (Northeast I, Northeast II, East-West, West-South) highly-structured geographically. Monophyly was recovered only for B. pubescens. By contrast, B. diporus, B. lutzi, B. erythromelas, B. mattogrossensis, B. neuwiedi, B. marmoratus, and B. pauloensis, as currently defined on the basis of morphology, were polyphyletic. Sympatry, phenotypic intergrades and shared mtDNA haplotypes, mainly between B. marmoratus and B. pauloensis suggest recent introgressive hybridization and the possible occurrence of a narrow hybrid zone in Central Brazil. Our data suggest at least three candidate species: B. neuwiedi from Espinhaço Range, B. mattogrossensis (TM173) from Serra da Borda (MT) and B. diporus (PT3404) from Castro Barros, Argentina. Divergence estimates highlight the importance of Neogene events in the origin of B. neuwiedi group, and the origin of species and diversification of populations of the Neotropical fauna from open biomes during the Quaternary climate fluctuations. Data reported here represent a remarkable increase of the B. neuwiedi group sampling size, since representatives of all the current recognized species from a wide geographic range are included in this study, providing basic information for understanding the evolution and conservation of Neotropical biodiversity.


Subject(s)
Bothrops/genetics , Phylogeny , Animals , DNA, Mitochondrial/genetics , Haplotypes , Hybridization, Genetic , Phenotype , Sequence Analysis, DNA , South America
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