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1.
Environ Monit Assess ; 196(9): 815, 2024 Aug 15.
Article in English | MEDLINE | ID: mdl-39145842

ABSTRACT

This study aims to comprehensively understand the Gosikhurd Dam ecosystem (GDE) ecosystem by employing the Ecopath with Ecosim software (version 6.6.5) to construct a trophic mass balancing model. This model consisted of 16 functional groups of organisms, and their interactions and trophic levels were explored. The study focuses on various performance indicators to assess the ecosystem's maturity and complexity. To achieve these objectives, monthly fish samples were collected from June 2022 to May 2023. Performance indicators such as the connectance index (CI), system omnivory index (SOI), Finn's cycling index (FCI), mean path length (FML), ascendency, overhead, and Shannon diversity index were calculated to assess ecosystem maturity and complexity. The Finn's cycling index (FCI) and the mean path length (FML) were calculated as 1.81 and 2.20, respectively, indicating the ecosystem's responsiveness to environmental changes and overall system health and stability. Ascendency and overhead values were also analysed, with ascendency being relatively higher (41.58%), reflecting a system that utilises less than half of its total capacity. The overhead value (58.42%) indicated that the ecosystem is relatively stable and capable of adapting to external perturbations. Furthermore, the Shannon diversity index was 1.67, illustrating less diversity and validating the ecosystem's immaturity. The study identifies critical species and their roles in shaping the ecosystem dynamics, highlighting the importance of zooplankton, zoobenthos, and tilapia as keystone species. These indices propound that GDE is in its developmental stage and lacks complexity compared to mature ecosystems. The findings provide valuable insights into the current state of the ecosystem and can guide future management and conservation efforts.


Subject(s)
Ecosystem , Environmental Monitoring , Fishes , India , Environmental Monitoring/methods , Animals , Biodiversity
2.
Ecol Evol ; 14(5): e11375, 2024 May.
Article in English | MEDLINE | ID: mdl-38706933

ABSTRACT

This study explores the interplay between digestive tract traits, food intake, and assimilation in omnivorous tetra fishes (Psalidodon bifasciatus, P. aff. gymnodontus, and Bryconamericus ikaa) from the Iguaçu River basin, an ecologically significant region known for high endemism. We hypothesize that variations in digestive tracts across species would be associated with differences in diet, isotopic composition in fish tissues, and overall diet assimilation. To test this, we employed stereoscopic and light microscopy to characterize the gross anatomy, histomorphology, and histochemistry of fish digestive tracts. Additionally, we used stomach content and stable isotope analyses to trace fish diets. While these tetra fishes shared histological structures, disparities were noted in anatomical digestive traits and diet preferences. The smallest species, B. ikaa, with a shorter intestine, had fewer pyloric caeca and primarily consumed animal-based diets. Conversely, P. bifasciatus and P. aff. gymnodontus, with longer intestines, displayed numerous pyloric caeca and consumed a balanced mix of animal and plant items. Despite anatomical and dietary differences, all three species predominantly assimilated animal-origin food. The tetra fishes had histological variations among digestive tract segments, with the esophagus having the thickest muscular layer, gradually thinning towards the posterior intestine. The final portion of the intestine exhibited a significant expansion in the lumen perimeter, while the esophagus had the smallest lumen area. Goblet cells were most concentrated in the posterior intestine for all species. The gross anatomy of these tetra fishes aligns with their omnivorous habit, while diet assimilation was dominated by animal-origin food. These findings provide crucial insights into the structural and tissue characteristics of their digestive systems, laying the groundwork for deeper exploration into the physiological aspects of their digestive tracts and enhancing our understanding of their feeding strategies.

3.
J Anim Ecol ; 93(6): 731-742, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38556748

ABSTRACT

Loss of species in food webs can set in motion a cascade of additional (secondary) extinctions. A species' position in a food web (e.g. its trophic level or number of interactions) is known to affect its ability to persist following disturbance. These simple measures, however, offer only a coarse description of how species fit into their community. One would therefore expect that more detailed structural measures such as participation in three-species motifs (meso-scale structures which provide information on a species' direct and indirect interactions) will also be related to probability of persistence. Disturbances affecting the basal resources have particularly strong effects on the rest of the food web. However, how disturbances branch out and affect consumer persistence depends on the structural pattern of species interactions in several steps. The magnitude, for example, the proportion of basal resources lost, will likely also affect the outcome. Here, we analyse whether a consumer's risk of secondary extinction after the removal of basal resources depends on the consumer's motif participation and how this relationship varies with the severity of disturbance. We show that consumer species which participate more frequently in the direct competition motif and less frequently in the omnivory motif generally have higher probability of persistence following disturbance to basal resources. However, both the strength of the disturbance and the overall network structure (i.e. connectance) affect the strength and direction of relationships between motif participation and persistence. Motif participation therefore captures important trends in species persistence and provides a rich description of species' structural roles in their communities, but must be considered in the context of network structure as a whole and of the specific disturbance applied.


Subject(s)
Extinction, Biological , Food Chain , Animals , Models, Biological
4.
Prev Med Rep ; 37: 102556, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38186660

ABSTRACT

The objective of this scoping review was to examine the breadth of the existing literature on the relation between meat consumption or meat abstention and positive psychological functioning. In April 2022, we conducted a systematic search of online databases (PubMed, PsycINFO, CINAHL Plus, Medline, Cochrane Library, and Web of Science) for primary research examining positive psychological functioning in meat consumers and those who abstain from meat. Thirteen studies met the inclusion/exclusion criteria, representing 89,138 participants (54,413 females and 33,863 males) with 78,562 meat consumers and 10,148 meat abstainers (13-102 years) from multiple geographic regions. The primary outcomes were life satisfaction, "positive mental health", self-esteem, and vigor. The secondary outcomes were "meaning in life", optimism, positive emotions, and psychological well-being. Eight of the 13 studies demonstrated no differences between the groups on positive psychological functioning, three studies showed mixed results, and two studies showed that compared to meat abstainers, meat consumers had greater self-esteem, "positive mental health", and "meaning in life". Studies varied substantially in methods and outcomes. Although a small minority of studies showed that meat consumers had more positive psychological functioning, no studies suggested that meat abstainers did. There was mixed evidence for temporal relations, but study designs precluded causal inferences. Our review demonstrates the need for future research given the equivocal nature of the extant literature on the relation between meat consumption and meat abstention and positive psychological functioning.

5.
Insects ; 14(11)2023 Nov 10.
Article in English | MEDLINE | ID: mdl-37999067

ABSTRACT

In addition to feeding on plants, Mormon crickets Anabrus simplex Haldeman, 1852 predate on invertebrates, including one another, which effectively drives their migration. Carnivory derives from lack of dietary protein, with Mormon crickets deprived of protein having less phenoloxidase (PO) available to combat foreign invaders, such as fungal pathogens. Because Mormon crickets commonly occur with grasshoppers that feed on the same plants, we investigated interactions between grasshoppers and Mormon crickets, and hypothesized that if Mormon crickets are predatory on grasshoppers, grasshopper abundance would influence the protein available to Mormon crickets and their immunity. In a field setting, we varied densities of Mormon crickets (0, 10, or 20 per cage) and grasshoppers Melanoplus borealis (0, 15, 30, or 45) in 68 1-m2 cages. After one month, we measured Mormon cricket dietary preferences and PO activity. As predicted, artificial diet consumption shifted away from protein as grasshopper density increased, and immunocompetence, as measured by PO activity, also increased with grasshopper availability. Although nitrogen availability in the vegetation decreased with increasing insect density, predation became an important source of protein for Mormon crickets that enhanced immunity. Grasshoppers can be an important source of dietary protein for Mormon crickets, with prey availability affecting Mormon cricket immunity to diseases.

6.
BMC Biol ; 21(1): 195, 2023 09 19.
Article in English | MEDLINE | ID: mdl-37726763

ABSTRACT

BACKGROUND: Adelphocoris suturalis (Hemiptera: Miridae) is a notorious agricultural pest, which causes serious economic losses to a diverse range of agricultural crops around the world. The poor understanding of its genomic characteristics has seriously hindered the establishment of sustainable and environment-friendly agricultural pest management through biotechnology and biological insecticides. RESULTS: Here, we report a chromosome-level assembled genome of A. suturalis by integrating Illumina short reads, PacBio, 10x Chromium, and Hi-C mapping technologies. The resulting 1.29 Gb assembly contains twelve chromosomal pseudomolecules with an N50 of 1.4 and 120.6 Mb for the contigs and scaffolds, respectively, and carries 20,010 protein-coding genes. The considerable size of the A. suturalis genome is predominantly attributed to a high amount of retrotransposons, especially long interspersed nuclear elements (LINEs). Transcriptomic and phylogenetic analyses suggest that A. suturalis-specific candidate effectors, and expansion and expression of gene families associated with omnivory, insecticide resistance and reproductive characteristics, such as digestion, detoxification, chemosensory receptors and long-distance migration likely contribute to its strong environmental adaptability and ability to damage crops. Additionally, 19 highly credible effector candidates were identified and transiently overexpressed in Nicotiana benthamiana for functional assays and potential targeting for insect resistance genetic engineering. CONCLUSIONS: The high-quality genome of A. suturalis provides an important genomic landscape for further investigations into the mechanisms of omnivory, insecticide resistance and survival adaptation, and for the development of integrated management strategies.


Subject(s)
Genomics , Insecticide Resistance , Insecticide Resistance/genetics , Phylogeny , Agriculture , Crops, Agricultural , Chromosomes
7.
J Anim Ecol ; 92(11): 2175-2188, 2023 11.
Article in English | MEDLINE | ID: mdl-37732627

ABSTRACT

Diet composition modulates animals' ability to resist parasites and recover from stress. Broader diet breadths enable omnivores to mount dynamic responses to parasite attack, but little is known about how plant/prey mixing might influence responses to infection. Using omnivorous deer mice (Peromyscus maniculatus) as a model, we examine how varying plant and prey concentrations in blended diets influence resistance and body condition following infestation by Rocky Mountain wood ticks (Dermacentor andersoni). In two repeated experiments, deer mice fed for 4 weeks on controlled diets that varied in proportions of seeds and insects were then challenged with 50 tick larvae in two sequential infestations. The numbers of ticks successfully feeding on mice declined by 25% and 66% after the first infestation (in the first and second experiments, respectively), reflecting a pattern of acquired resistance, and resistance was strongest when plant/prey ratios were more equally balanced in mouse diets, relative to seed-dominated diets. Diet also dramatically impacted the capacity of mice to cope with tick infestations. Mice fed insect-rich diets lost 15% of their body weight when parasitized by ticks, while mice fed seed-rich diets lost no weight at all. While mounting/maintaining an immune response may be energetically demanding, mice may compensate for parasitism with fat and carbohydrate-rich diets. Altogether, these results suggest that a diverse nutritional landscape may be key in enabling omnivores' resistance and resilience to infection and immune stressors in their environments.


Subject(s)
Parasites , Rodent Diseases , Tick Infestations , Animals , Peromyscus , Larva/physiology , Tick Infestations/parasitology , Tick Infestations/veterinary , Diet/veterinary
8.
Ecol Evol ; 13(5): e10141, 2023 May.
Article in English | MEDLINE | ID: mdl-37250450

ABSTRACT

Omnivores utilize dietary sources which differ in nutrients, hence dietary limitations due to environmental change or habitat alteration could cause nutrient limitations, and thus deterioration of body condition if omnivory is obligate. We investigated how the body condition of the omnivorous Village weaver Ploceus cucullatus (weavers), which forages predominantly on grains, responds to the supplementation of its grain diet with insects instead of fruits. Forty wild-caught weavers held in aviaries were fed a combination of grains and fruits, or grains and insects ad libitum for 8 weeks. We determined diet preference by recording the number of birds on each diet option per minute for 1 h and the amount of food left-over after 3 h of foraging. Fortnightly, we assessed indices of body condition including body mass, pectoral muscle, and fat scores, packed cell volume (PCV), and hemoglobin concentration (HBC). We modeled the number of foragers, food left-over, and body condition indices as functions of diet, while accounting for time (weeks) and sex effects. Grains were the preferred diet, but males ate more fruits and insects than females. Weavers fed on grains and fruits lost body and pectoral muscle mass and accumulated less fat than those fed on grains and insects. This effect was sex-dependent: females supplemented with fruits lost more pectoral muscle mass than males of the same group and males but not females, supplemented with insects accumulated more fat reserve than those supplemented with fruits. PCV and HBC did not differ between diets but increased over the 8 weeks. Weavers are likely obligate rather than facultative omnivores, with insects as being a more nutritive supplement than fruits. Nutrient limitation arising from environmental change or habitat alteration could impair body condition and affect physiological function to environmental seasonality in obligate omnivores like the weavers.

9.
Ecol Evol ; 13(5): e10089, 2023 May.
Article in English | MEDLINE | ID: mdl-37206688

ABSTRACT

Avian diet can be affected by site-specific variables, such as habitat, as well as intrinsic factors such as sex. This can lead to dietary niche separation, which reduces competition between individuals, as well as impacting how well avian species can adapt to environmental variation. Estimating dietary niche separation is challenging, due largely to difficulties in accurately identifying food taxa consumed. Consequently, there is limited knowledge of the diets of woodland bird species, many of which are undergoing serious population declines. Here, we show the effectiveness of multi-marker fecal metabarcoding to provide in-depth dietary analysis of a declining passerine in the UK, the Hawfinch (Coccothraustes coccothraustes). We collected fecal samples from (n = 262) UK Hawfinches prior to, and during, the breeding seasons in 2016-2019. We detected 49 and 90 plant and invertebrate taxa, respectively. We found Hawfinch diet varied spatially, as well as between sexes, indicating broad dietary plasticity and the ability of Hawfinches to utilize multiple resources within their foraging environments.

10.
Proc Biol Sci ; 290(1992): 20221062, 2023 02 08.
Article in English | MEDLINE | ID: mdl-36722085

ABSTRACT

Mammalian omnivores are a broad group of species that are often treated uniformly in ecological studies. Here, we incorporate omnivorous dietary differences to investigate previously found mammalian macroevolutionary and macroecological trends. We investigate the frequency with which vertebrate prey, invertebrate prey, fibrous plant material and non-fibrous plant material co-occur in the diets of terrestrial mammals. We quantify the body size distributions and phylogenetic signal of different omnivorous diets and use multistate reversible jump Markov chain Monte Carlo methods to assess the transition rates between diets on the mammalian phylogenetic tree. We find omnivores that consume all four food types are relatively rare, as most omnivores consume only invertebrate prey and non-fibrous plants. In addition, omnivores that only consume invertebrate prey, many of which are from Rodentia, are on average smaller than omnivores that incorporate vertebrate prey. Our transition models have high rates from invertivorous omnivory to herbivory, and from vertivory to prey mixing and ultimately invertivory. We suggest prey type is an important aspect of omnivore macroevolution and macroecology, as it is correlated with body mass, evolutionary history and diet-related evolutionary transition rates. Future work should avoid lumping omnivores into one category given the ecological variety of omnivore diets and their strong evolutionary influence.


Subject(s)
Diet , Mammals , Animals , Phylogeny , Body Size
11.
J Anim Ecol ; 92(3): 751-759, 2023 03.
Article in English | MEDLINE | ID: mdl-36695631

ABSTRACT

Nutrients regulate herbivore growth from the 'bottom-up' via improved plant vigour and food quality. Nitrogen also affects 'top-down' control of herbivores by moderating attraction of predators and the rates at which they consume herbivorous prey. Tri-trophic consequences of nitrogen availability are more challenging to predict among omnivorous natural enemies who feed on both plants and herbivores, limiting our ability to predict net outcomes of nutrient availability in food webs. In a two-year field survey of insects on zucchini host plants at 48 sites, I predicted that both herbivores and foliar-feeding omnivores would increase with nutrient availability, while predators would not. My results revealed positive relationships between omnivores and foliar nitrogen concentrations, while predators had neutral responses to foliar N. Surprisingly, herbivores declined with increasing foliar N across the field sites. Greenhouse experiments re-enforced these patterns, as herbivore growth inversely correlated with soil N concentrations in communities that included foliar-feeding omnivores. Conversely, herbivore growth was uncorrelated with soil N on plants with predators, nor on predator-free plants. These results suggest that omnivores mount strong and consistent responses to nitrogen in plant tissues in a variety of ecological contexts. In environments where omnivorous arthropods can thrive, their recruitment to nitrogen-rich plants may increase predation and thereby counterbalance and stabilize 'bottom-up' increases in herbivore performance supported by enhanced foliar nutrition.


Subject(s)
Food Chain , Herbivory , Animals , Herbivory/physiology , Insecta/physiology , Nitrogen , Plants , Nutrients
12.
J Anim Ecol ; 92(2): 273-284, 2023 02.
Article in English | MEDLINE | ID: mdl-35569094

ABSTRACT

When ecosystems are under severe pressure or environments change, trophic position and intraspecific niche width may decrease or narrow, signalling that conservation action is required. In New Zealand, alpine and subalpine ecosystems have been extensively modified through farming since 19th-century European settlement, with consequences for indigenous species such as the kea Nestor notabilis. We investigated feather stable isotope values in the kea and predicted a lower trophic position in modern kea populations, to reflect reduced lowland habitat and a mixed diet with more plant material. We predicted that size and sex would influence trophic values in this sexually dimorphic species, with larger birds more likely to have a high protein diet. We examined potential dietary changes in 68 museum collected kea from 1880s to 2000s, first recording accession details including provenance and sex and measuring culmen length. We used bulk carbon and nitrogen stable isotope analyses (BSIAs) of feathers and a further feather subset using compound-specific stable isotope analyses of amino acids (CSIA-AA) to obtain isotopic values and estimate trophic position. BSIA showed δ15 N values in kea feathers declined through time and could indicate that early century kea were highly omnivorous, with δ15 N values on average higher than in modern kea. Variance in δ15 N values was greater after 1950, driven by a few individuals. Few differences between males and females were evident, although females in the south region had lower δ15 N values. There was a tendency for large male birds to have higher trophic values, perhaps reflecting dominant male bird behaviour noted in historical records. Nonetheless, CSIA-AA performed on a subset of the data suggested that variation in BSIA is likely due to baseline changes rather than relative trophic position which may be more homogenous than these data indicate. Although there was more variability in modern kea, we suggest caution in interpretation. Stable isotope data, particularly CSIA-AA, from museum specimens can reveal potential change in ecological networks as well as sexually dimorphic feeding patterns within species. The data can reveal temporal and regional variation in species trophic position and changes in ecosystem integrity to inform conservation decision-making.


Subject(s)
Ecosystem , Parrots , Male , Female , Animals , Museums , Nitrogen Isotopes/analysis , Diet , Carbon Isotopes/analysis
13.
Prog Cardiovasc Dis ; 74: 9-10, 2022.
Article in English | MEDLINE | ID: mdl-36089009

Subject(s)
Diet , Humans
14.
Microorganisms ; 10(8)2022 Jul 31.
Article in English | MEDLINE | ID: mdl-36013968

ABSTRACT

Diet has been suggested to be an important driver of variation in microbiota composition in mammals. However, whether this is a more general phenomenon and how fast changes in gut microbiota occur with changes in diet remains poorly understood. Forty-nine years ago, ten lizards of the species Podarcis siculus were taken from the island of Pod Kopiste and introduced onto the island of Pod Mrcaru (Croatia). The introduced population underwent a significant dietary shift, and their descendants became omnivorous (consuming up to 80% plant material during summer). Variation in their gut microbiota has never been investigated. To elucidate the possible impact on the gut microbiota of this rapid change in diet, we compared the microbiota (V4 region of the 16S rRNA gene) of P. siculus from Pod Mrcaru, Pod Kopiste, and the mainland. In addition, we explored other drivers of variation in gut microbiota including insularity, the population of origin, and the year of sampling. Alpha-diversity analyses showed that the microbial diversity of omnivorous lizards was higher than the microbial diversity of insectivorous lizards. Moreover, omnivorous individuals harbored significantly more Methanobrevibacter. The gut microbial diversity of insectivorous lizards was nonetheless more heterogeneous. Insectivorous lizards on the mainland had different gut microbial communities than their counterparts on the island of Pod Kopiste. Bacillus and Desulfovibrio were more abundant in the gut microbiota from insular lizards compared to mainland lizards. Finally, we showed that the population of origin was also an important driver of the composition of the gut microbiota. The dietary shift that occurred in the introduced population of P. siculus has had a detectable impact on the gut microbiota, but other factors such as insularity and the population of origin also contributed to differences in the gut microbial composition of these lizards, illustrating the multifactorial nature of the drivers of variation in gut microbiota. Overall, our data show that changes in gut microbiota may take place on ecological timescales. Yet, diet is only one of many factors driving variation in gut microbiota across populations.

15.
Biol Rev Camb Philos Soc ; 97(4): 1691-1711, 2022 08.
Article in English | MEDLINE | ID: mdl-35393748

ABSTRACT

The belowground compartment of terrestrial ecosystems drives nutrient cycling, the decomposition and stabilisation of organic matter, and supports aboveground life. Belowground consumers create complex food webs that regulate functioning, ensure stability and support biodiversity both below and above ground. However, existing soil food-web reconstructions do not match recently accumulated empirical evidence and there is no comprehensive reproducible approach that accounts for the complex resource, size and spatial structure of food webs in soil. Here I build on generic food-web organisation principles and use multifunctional classification of soil protists, invertebrates and vertebrates, to reconstruct a 'multichannel' food web across size classes of soil-associated consumers. I infer weighted trophic interactions among trophic guilds using feeding preferences and prey protection traits (evolutionarily inherited traits), size and spatial distributions (niche overlaps), and biomass-dependent feeding. I then use food-web reconstruction, together with assimilation efficiencies, to calculate energy fluxes assuming a steady-state energetic system. Based on energy fluxes, I propose a number of indicators, related to stability, biodiversity and multiple ecosystem-level functions such as herbivory, top-down control, translocation and transformation of organic matter. I illustrate this approach with an empirical example, comparing it with traditional resource-focused soil food-web reconstruction. The multichannel reconstruction can be used to assess 'trophic multifunctionality' (analogous to ecosystem multifunctionality), i.e. simultaneous support of multiple trophic functions by the food web, and compare it across communities and ecosystems spanning beyond the soil. With further empirical validation of the proposed functional indicators, this multichannel reconstruction approach could provide an effective tool for understanding animal diversity-ecosystem functioning relationships in soil. This tool hopefully will inspire more researchers to describe soil communities and belowground-aboveground interactions comprehensively. Such studies will provide informative indicators for including consumers as active agents in biogeochemical models, not only locally but also on regional and global scales.


Subject(s)
Ecosystem , Food Chain , Animals , Biodiversity , Invertebrates , Soil
16.
Ecol Lett ; 25(5): 1094-1109, 2022 May.
Article in English | MEDLINE | ID: mdl-35235713

ABSTRACT

Seed dispersal directly affects plant establishment, gene flow and fitness. Understanding patterns in seed dispersal is, therefore, fundamental to understanding plant ecology and evolution, as well as addressing challenges of extinction and global change. Our ability to understand dispersal is limited because seeds may be dispersed by multiple agents, and the effectiveness of these agents can be highly variable both among and within species. We provide a novel framework that links seed dispersal to animal social status, a key component of behaviour. Because social status affects individual resource access and movement, it provides a critical link to two factors that determine seed dispersal: the quantity of seeds dispersed and the spatial patterns of dispersal. Social status may have unappreciated effects on post-dispersal seed survival and recruitment when social status affects individual habitat use. Hence, environmental changes, such as selective harvesting and urbanisation, that affect animal social structure may have unappreciated consequences for seed dispersal. This framework highlights these exciting new hypotheses linking environmental change, social structure and seed dispersal. By outlining experimental approaches to test these hypotheses, we hope to facilitate studies across a wide diversity of plant-animal networks, which may uncover emerging hotspots or significant declines in seed dispersal.


Subject(s)
Seed Dispersal , Animals , Ecosystem , Seeds , Social Status , Vertebrates
17.
Biol Rev Camb Philos Soc ; 97(3): 1057-1117, 2022 06.
Article in English | MEDLINE | ID: mdl-35060265

ABSTRACT

Soil organisms drive major ecosystem functions by mineralising carbon and releasing nutrients during decomposition processes, which supports plant growth, aboveground biodiversity and, ultimately, human nutrition. Soil ecologists often operate with functional groups to infer the effects of individual taxa on ecosystem functions and services. Simultaneous assessment of the functional roles of multiple taxa is possible using food-web reconstructions, but our knowledge of the feeding habits of many taxa is insufficient and often based on limited evidence. Over the last two decades, molecular, biochemical and isotopic tools have improved our understanding of the feeding habits of various soil organisms, yet this knowledge is still to be synthesised into a common functional framework. Here, we provide a comprehensive review of the feeding habits of consumers in soil, including protists, micro-, meso- and macrofauna (invertebrates), and soil-associated vertebrates. We have integrated existing functional group classifications with findings gained with novel methods and compiled an overarching classification across taxa focusing on key universal traits such as food resource preferences, body masses, microhabitat specialisation, protection and hunting mechanisms. Our summary highlights various strands of evidence that many functional groups commonly used in soil ecology and food-web models are feeding on multiple types of food resources. In many cases, omnivory is observed down to the species level of taxonomic resolution, challenging realism of traditional soil food-web models based on distinct resource-based energy channels. Novel methods, such as stable isotope, fatty acid and DNA gut content analyses, have revealed previously hidden facets of trophic relationships of soil consumers, such as food assimilation, multichannel feeding across trophic levels, hidden trophic niche differentiation and the importance of alternative food/prey, as well as energy transfers across ecosystem compartments. Wider adoption of such tools and the development of open interoperable platforms that assemble morphological, ecological and trophic data as traits of soil taxa will enable the refinement and expansion of the multifunctional classification of consumers in soil. The compiled multifunctional classification of soil-associated consumers will serve as a reference for ecologists working with biodiversity changes and biodiversity-ecosystem functioning relationships, making soil food-web research more accessible and reproducible.


Subject(s)
Ecosystem , Soil , Animals , Food Chain , Habits , Humans , Vertebrates
18.
Front Microbiol ; 13: 1107153, 2022.
Article in English | MEDLINE | ID: mdl-36909844

ABSTRACT

Many arthropods host bacterial symbionts, some of which are known to influence host nutrition and diet breadth. Omnivorous bugs of the genus Macrolophus (Heteroptera: Miridae) are mainly predatory, but may also feed on plants. The species M. pygmaeus and M. melanotoma (=M. caliginosus) are key natural enemies of various economically important agricultural pests, and are known to harbor two Rickettsia species, R. bellii and R. limoniae. To test for possible involvement of symbiotic bacteria in the nutritional ecology of these biocontrol agents, the abundance, phylogeny, and distribution patterns of the two Rickettsia species in M. pygmaeus and M. melanotoma were studied. Both of the Rickettsia species were found in 100 and 84% of all tested individuals of M. pygmaeus and M. melanotoma, respectively. Phylogenetic analysis showed that a co-evolutionary process between Macrolophus species and their Rickettsia is infrequent. Localization of R. bellii and R. limoniae has been detected in both female and male of M. pygmaeus and M. melanotoma. FISH analysis of female gonads revealed the presence of both Rickettsia species in the germarium of both bug species. Each of the two Rickettsia species displayed a unique distribution pattern along the digestive system of the bugs, mostly occupying separate epithelial cells, unknown caeca-like organs, the Malpighian tubules and the salivary glands. This pattern differed between the two Macrolophus species: in M. pygmaeus, R. limoniae was distributed more broadly along the host digestive system and R. bellii was located primarily in the foregut and midgut. In contrast, in M. melanotoma, R. bellii was more broadly distributed along the digestive system than the clustered R. limoniae. Taken together, these results suggest that Rickettsia may have a role in the nutritional ecology of their plant-and prey-consuming hosts.

19.
Ecology ; 103(1): e03548, 2022 01.
Article in English | MEDLINE | ID: mdl-34618914

ABSTRACT

In the past decade, it has become clear that omnivory, feeding on more than one trophic level, is important in natural and agricultural systems. Large mammalian herbivores (LMH) frequently encounter plant-dwelling arthropods (PDA) on their food plants. Yet, ingestion of PDA by LMH is only rarely addressed and the extent of this direct trophic interaction, especially at the PDA community level, remains unknown. Using a DNA-metabarcoding analysis on feces of free-ranging cattle from a replicated field experiment of heavily and moderately grazed paddocks, we reveal that feeding cattle (incidentally) ingest an entire food chain of PDA including herbivores, predators and parasites. Overall, 25 families of insects and four families of arachnids were ingested, a pattern that varied over the season, but not with grazing intensity. We identified the functional groups of PDA vulnerable to ingestion, such as sessile species and immature life stages. Most of the fecal samples (76%) contained sequences belonging to PDA, indicating that direct interactions are frequent. This study highlights the complex trophic connections between LMH and PDA. It may even be appropriate to consider LMH as omnivorous enemies of PDA.


Subject(s)
Arthropods , Herbivory , Animals , Cattle , DNA , DNA Barcoding, Taxonomic , Food Chain
20.
Trends Parasitol ; 37(12): 1096-1110, 2021 12.
Article in English | MEDLINE | ID: mdl-34544647

ABSTRACT

The order Carnivora includes over 300 species that vary many orders of magnitude in size and inhabit all major biomes, from tropical rainforests to polar seas. The high diversity of carnivore parasites represents a source of potential emerging diseases of humans. Zoonotic risk from this group may be driven in part by exceptionally high functional diversity of host species in behavioral, physiological, and ecological traits. We review global macroecological patterns of zoonotic parasites within carnivores, and explore the traits of species that serve as hosts of zoonotic parasites. We synthesize theoretical and empirical research and suggest future work on the roles of carnivores as biotic multipliers, regulators, and sentinels of zoonotic disease as timely research frontiers.


Subject(s)
Carnivora/parasitology , Host-Parasite Interactions , Zoonoses/parasitology , Animals , Biodiversity , Host Specificity , Humans
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