Detection of nutritional stress in sugarcane by VIS-NIR-SWIR reflectance spectroscopy / Detecção de estresse nutricional em cana-de-açúcar por espectroscopia de reflectância VIS-NIR-SWIR

This study applied spectroradiometry techniques with hyperspectral data to identify the correlations between sugarcane leaf reflectance and the contents of Nitrogen (N), phosphorus (P), Potassium (K), Sulfur (S), Calcium (Ca) and Magnesium (Mg). During the harvests 2019/20 and 2020/21, sugarcane was introduced to nutritional stress by the application of limestone doses. Liming was applied in a fractional way and, at the end of five years, the amounts corresponded to 0, 9, 15 and 21 t ha-1 of dolomitic limestone. The leaf hyperspectral reflectance data and the state of nutrients in the exponential growth phase of the culture were registered. The wavelengths correlated with N, P, K, S, Ca and Mg were identified using the Spearman's correlation analysis. The test of similarity (ANOSIM) and the Principal Component Analysis (PCA) were applied to evaluate data variability, as well as the Partial Least Squares Regression (PLSR) for the prediction of the nutritional contents. The order of the degree of correlation in the region of visible was: P > K > N > Ca > S > Mg and for the region of the near infrared: P > K > Ca > N > S > Mg. P presented peaks with high correlations in the wavelengths 706-717 nm (-0.78) and 522-543 nm (-0.76). The values of the PLSR registered the best spectral responses in the region of VIS and red-edge, regions that are more sensitive to the deficiency of sulfur, potassium and phosphorus.

Este estudo aplicou técnicas de espectrorradiometria com dados hiperespectrais para identificar as relações da reflectância foliar da cana-de-açúcar com os teores de Nitrogênio (N), Fósforo (P), Potássio (K), Enxofre (S), Cálcio (Ca) e Magnésio (Mg). Durante as safras 2019/20 e 2020/21 a cana foi induzida ao estresse nutricional a partir da aplicação de doses de calcário. A calagem foi aplicada de forma fracionada e ao final de cinco anos as quantidades corresponderam a 0, 9, 15 e 21 t ha-1 de calcário do tipo dolomítico. Foram registrados os dados de reflectância hiperespectral da folha e o estado de nutrientes na fase de exponencial crescimento da cultura. Os comprimentos de onda correlacionados ao N, P, K, S, Ca e Mg foram identificados usando análise de correlação de Spearman. Aplicou-se o teste de similaridade (ANOSIM) e Análise de Componentes Principais (ACP) para avaliar a variabilidade dos dados, assim como, a Regressão por Mínimos Quadrados Parciais (PLRS) para a predição dos teores nutricionais. A ordem do grau de correlação na região do visível foi: P > K > N > Ca > S > Mg e para região do infravermelho próximo: P > K > Ca > N > S > Mg. O P teve picos com alta correlação nos comprimentos de onda 706-717 nm (-0,78) e 522-543 nm (-0,76). Os valores do PLRS registraram melhores respostas espectrais na região do VIS e red-edge, regiões mais sensíveis a deficiência do enxofre, potássio e fósforo.

The pattern of color change in small mammal museum specimens: is it independent of storage histories given museum-specific conditions?

OBJECTIVE: Determination of color and evaluating its variation form the basis for a broad range of research questions. For studies on taxonomy, systematics, etc., resorting to mammal specimens in museum collections has a number of advantages over using field specimens. However, if museum specimens are to be for studying color, they should accurately represent the color of live animals, or we should understand how they differ. Basically, this study addresses this question: How does coat color vary when dealing with specimens of Akodon budini (Budin's grass mouse, Thomas 1918), stored in one museum collection for different periods of time? RESULTS: We measured color values through a spectroradiometer and a diffuse illumination cabin and used the reflectance values in the form of CIELab tri-stimulus values, considering CIE standard illuminant A. We observed that there is a relationship between specimen storage antiquity and pelage color and it seems that it is general for at least a number of small mammals and this could indicate a universal phenomenon across several mammal species and across several storage conditions. Our results, as others, emphasize the importance of considering storage time, among other circumstances, in research studies using mammal skins and where color is of importance.

Ultraviolet radiation in the Atacama Desert.

The world's highest levels of surface ultraviolet (UV) irradiance have been measured in the Atacama Desert. This area is characterized by its high altitude, prevalent cloudless conditions, and a relatively low total ozone column. In this paper, we provide estimates of the surface UV (monthly UV index at noon and annual doses of UV-B and UV-A) for all sky conditions in the Atacama Desert. We found that the UV index at noon during the austral summer is expected to be greater than 11 in the whole desert. The annual UV-B (UV-A) doses were found to range from about 3.5 kWh/m2 (130 kWh/m2) in coastal areas to 5 kWh/m2 (160 kWh/m2) on the Andean plateau. Our results confirm significant interhemispherical differences. Typical annual UV-B doses in the Atacama Desert are about 40% greater than typical annual UV-B doses in northern Africa. Mostly due to seasonal changes in the ozone, the differences between the Atacama Desert and northern Africa are expected to be about 60% in the case of peak UV-B levels (i.e. the UV-B irradiances at noon close to the summer solstice in each hemisphere). Interhemispherical differences in the UV-A are significantly lower since the effect of the ozone in this part of the spectrum is minor.

Temporal dynamics of spectral reflectance and vegetation indices during canola crop cycle in southern Brazil / Dinâmica temporal dos índices da reflectância espectral e índices de vegetação durante o ciclo da cultura de canola no Sul do Brasil

The objective of this study was to characterize the variability of spectral reflectance and temporal profiles of vegetation indices associated with nitrogen fertilization, crop cycle periods, and weather conditions of the growing season in canola canopies in southern Brazil. An experiment was carried out during the 2013 and 2014 canola growing seasons at EMBRAPA Trigo, Passo Fundo, state of Rio Grande do Sul, Brazil. The experiment was conducted in a randomized block design with four replications. Five doses of nitrogen top dressing were used as treatments: 10, 20, 40, 80, and 160kg ha-1. Measurements were obtained with the spectroradiometer positioned above the canopy, to construct spectral reflectance curves for canola and establish temporal profiles for several vegetation indices (SR, NDVI, EVI, SAVI, and GNDVI). In addition, data on shoot dry matter were obtained and phenological stages were determined. The spectral reflectance curves of canola were reported to change with canopy growth and development. Temporal profiles of vegetation indices showed two maximum peaks, one before flowering and other after flowering. The indices SR, NDVI, EVI, SAVI, and GNDVI were able to characterize changes in the canola canopy over time, as a function of phenological phases, weather conditions, and nitrogen fertilization, throughout the development cycle. Plant growth and development, variations in crop management, and environmental conditions affect the spectral response of canola.(AU)

O objetivo deste trabalho foi caracterizar a variabilidade da reflectância espectral e dos perfis temporais dos índices de vegetação de dosséis de canola, associada à adubação nitrogenada, aos períodos do ciclo da cultura e às condições meteorológicas no sul do Brasil. Foi instalado um experimento nas safras de 2013 e 2014, na EMBRAPA Trigo, em Passo Fundo, RS. O delineamento experimental foi de blocos casualizados com quatro repetições. Foram utilizados os tratamentos de cinco doses de nitrogênio em cobertura: 10, 20, 40, 80, 160kg ha-1. Foram realizadas medições com espectrorradiômetro, sobre o dossel, para compor curvas de reflectância espectral da canola e perfis temporais dos índices de vegetação SR, NDVI, EVI, SAVI e GNDVI. Também foram obtidos dados de matéria seca da parte aérea e feitas determinações de fenologia. Verificou-se que as curvas de reflectância espectral da canola mudaram com o crescimento e desenvolvimento do dossel. Os perfis temporais dos índices de vegetação apresentaram dois picos máximos, um antes e outro após o florescimento. Os índices SR, NDVI, EVI, SAVI e GNDVI foram capazes de caracterizar temporalmente as modificações do dossel da canola ao longo do ciclo, em função de fases fenológicas, condições meteorológicas e adubação nitrogenada. O crescimento e desenvolvimento das plantas, as variações de manejo da cultura e as condições ambientais afetam a resposta espectral da canola.(AU)

Temporal dynamics of spectral reflectance and vegetation indices during canola crop cycle in southern Brazil / Dinâmica temporal dos índices da reflectância espectral e índices de vegetação durante o ciclo da cultura de canola no Sul do Brasil

The objective of this study was to characterize the variability of spectral reflectance and temporal profiles of vegetation indices associated with nitrogen fertilization, crop cycle periods, and weather conditions of the growing season in canola canopies in southern Brazil. An experiment was carried out during the 2013 and 2014 canola growing seasons at EMBRAPA Trigo, Passo Fundo, state of Rio Grande do Sul, Brazil. The experiment was conducted in a randomized block design with four replications. Five doses of nitrogen top dressing were used as treatments: 10, 20, 40, 80, and 160kg ha-1. Measurements were obtained with the spectroradiometer positioned above the canopy, to construct spectral reflectance curves for canola and establish temporal profiles for several vegetation indices (SR, NDVI, EVI, SAVI, and GNDVI). In addition, data on shoot dry matter were obtained and phenological stages were determined. The spectral reflectance curves of canola were reported to change with canopy growth and development. Temporal profiles of vegetation indices showed two maximum peaks, one before flowering and other after flowering. The indices SR, NDVI, EVI, SAVI, and GNDVI were able to characterize changes in the canola canopy over time, as a function of phenological phases, weather conditions, and nitrogen fertilization, throughout the development cycle. Plant growth and development, variations in crop management, and environmental conditions affect the spectral response of canola.

O objetivo deste trabalho foi caracterizar a variabilidade da reflectância espectral e dos perfis temporais dos índices de vegetação de dosséis de canola, associada à adubação nitrogenada, aos períodos do ciclo da cultura e às condições meteorológicas no sul do Brasil. Foi instalado um experimento nas safras de 2013 e 2014, na EMBRAPA Trigo, em Passo Fundo, RS. O delineamento experimental foi de blocos casualizados com quatro repetições. Foram utilizados os tratamentos de cinco doses de nitrogênio em cobertura: 10, 20, 40, 80, 160kg ha-1. Foram realizadas medições com espectrorradiômetro, sobre o dossel, para compor curvas de reflectância espectral da canola e perfis temporais dos índices de vegetação SR, NDVI, EVI, SAVI e GNDVI. Também foram obtidos dados de matéria seca da parte aérea e feitas determinações de fenologia. Verificou-se que as curvas de reflectância espectral da canola mudaram com o crescimento e desenvolvimento do dossel. Os perfis temporais dos índices de vegetação apresentaram dois picos máximos, um antes e outro após o florescimento. Os índices SR, NDVI, EVI, SAVI e GNDVI foram capazes de caracterizar temporalmente as modificações do dossel da canola ao longo do ciclo, em função de fases fenológicas, condições meteorológicas e adubação nitrogenada. O crescimento e desenvolvimento das plantas, as variações de manejo da cultura e as condições ambientais afetam a resposta espectral da canola.

Assessing biophysical variable parameters of bean crop with hyperspectral measurements

Recently high spectral resolution sensors have been developed, which allow new and more advanced applications in agriculture. Motivated by the increasing importance of hyperspectral remote sensing data, the need for research is important to define optimal wavebands to estimate biophysical parameters of crop. The use of narrow band vegetation indices (VI) derived from hyperspectral measurements acquired by a field spectrometer was evaluated to estimate bean (Phaseolus vulgaris L.) grain yield, plant height and leaf area index (LAI). Field canopy reflectance measurements were acquired at six bean growth stages over 48 plots with four water levels (179.5; 256.5; 357.5 and 406.2 mm) and tree nitrogen rates (0; 80 and 160 kg ha-1) and four replicates. The following VI was analyzed: OSNBR (optimum simple narrow-band reflectivity); NB_NDVI (narrow-band normalized difference vegetation index) and NDVI (normalized difference index). The vegetation indices investigated (OSNBR, NB_NDVI and NDVI) were efficient to estimate LAI, plant height and grain yield. During all crop development, the best correlations between biophysical variables and spectral variables were observed on V4 (the third trifoliolate leaves were unfolded in 50 % of plants) and R6 (plants developed first flowers in 50 % of plants) stages, according to the variable analyzed.

Assessing biophysical variable parameters of bean crop with hyperspectral measurements

Recently high spectral resolution sensors have been developed, which allow new and more advanced applications in agriculture. Motivated by the increasing importance of hyperspectral remote sensing data, the need for research is important to define optimal wavebands to estimate biophysical parameters of crop. The use of narrow band vegetation indices (VI) derived from hyperspectral measurements acquired by a field spectrometer was evaluated to estimate bean (Phaseolus vulgaris L.) grain yield, plant height and leaf area index (LAI). Field canopy reflectance measurements were acquired at six bean growth stages over 48 plots with four water levels (179.5; 256.5; 357.5 and 406.2 mm) and tree nitrogen rates (0; 80 and 160 kg ha-1) and four replicates. The following VI was analyzed: OSNBR (optimum simple narrow-band reflectivity); NB_NDVI (narrow-band normalized difference vegetation index) and NDVI (normalized difference index). The vegetation indices investigated (OSNBR, NB_NDVI and NDVI) were efficient to estimate LAI, plant height and grain yield. During all crop development, the best correlations between biophysical variables and spectral variables were observed on V4 (the third trifoliolate leaves were unfolded in 50 % of plants) and R6 (plants developed first flowers in 50 % of plants) stages, according to the variable analyzed.