Effect of synthetic fatty liquor and neatsfoot oil as co-contaminants on the reduction of hexavalent chromium using Fusarium oxysporum and its kinetic study.

The hexavalent chromium is one of the major carcinogenic components released during the tanning process and lots of work have been carried out on the reduction of hexavalent chromium via chemical and biological routes. Different fatty oils are also employed in the tanning process and have also been released as an effluent along with chromium. However, it is difficult to find a study on the reduction of chromium in the presence of other contaminant which would help to mimic the real-time complication of treating the tannery effluent. It is the first attempt on the reduction of hexavalent chromium in the presence of synthetic fatty liquor and neatsfoot oil using Fusarium oxysporum. The maximum percentage of chromium reduction was 73.62% and 60.28% in neatsfoot oil and synthetic fatty oil, respectively, for the initial chromium concentration of 25 mg/L. The biomass productivity was better with both neatsfoot oil and synthetic fatty oil, whereas the same has decreased with the presence of chromium. The reduction of chromium was found to follow the uncompetitive substrate inhibition kinetics than the general Michaelis-Menten kinetics. The kinetic parameters were calculated using particle swarm optimization algorithm, which were compared with the already reported data. The uncompetitive substrate inhibition kinetics was represented the experimental data in both the cases and the value of substrate inhibition constant was low in the case of neatsfoot oil compared with the synthetic fatty liquor.

Mass balance and kinetics of biodegradation of endocrine disrupting phthalates by Cellulosimicrobium funkei in a continuous stirred tank reactor system.

This study investigated the potential ofCellulosimicrobium funkeifor degrading dimethyl phthalate (DMP) and diethyl phthalate (DEP). Effect of different initial concentrations of phthalates on their biodegradation and growth ofC. funkeiwas examined using shake flasks and a continuous stirred tank reactor (CSTR). Complete degradation of both DMP and DEP was achieved in CSTR, even up to 3000 and 2000 mg/L initial concentrations, respectively. Simultaneous degradation of the phthalates in mixture, i.e. more than 80% and 55% biodegradation efficiency were achieved at 1000 and 2000 mg/L initial concentrations of DMP and DEP, respectively, using the CSTR. Mass balance analysis of the degradation results suggested proficient degradation of DMP and DEP with biomass yield values of 0.64 and 0.712, respectively. The high values of inhibition constant Kiestimated using the Tessier and Edward substrate inhibition models indicated very good tolerance ofC. funkeitoward biodegradation of DMP and DEP.

Atypical Michaelis-Menten kinetics in cytochrome P450 enzymes: A focus on substrate inhibition.

The widespread applications of the century-old Michaelis-Menten kinetics in the characterization of drug-metabolizing cytochrome P450 enzymes have persisted since their discovery in the 1950s. This is a concern given preceding reports of atypical Michaelis-Menten kinetics in substrates and effectors of cytochrome P450 enzymes which disprove previous notions that these phenomena exist purely as experimental artifacts while highlighting the neglected risk of errors when adopting inaccurate hyperbolic kinetic models for both in vitro-in vivo extrapolation and prediction of drug-drug interactions. This commentary summarizes the various types of atypical Michaelis-Menten kinetics, such as biphasic kinetics, homotropic and heterotropic cooperativity, with a special focus on substrate inhibition kinetics, the postulated mechanisms and models in the presence and absence of a xenobiotic inhibitor and roles in regulation of endogenous metabolism. Potential artifactual sources of atypical kinetics are also discussed.

Experimentation and CFD modeling of continuous degradation of formaldehyde by immobilized Ralstonia eutropha in a semi-pilot-scale plug flow bioreactor.

This study focuses on continuous formaldehyde (FA) biodegradation by Ralstonia eutropha immobilized on polyurethane foam in a semi-pilot-scale plug flow packed-bed bioreactor. The stepwise increasing of the influent FA concentration from 43.9 to 1325.1 mg L-1 was studied in the bioreactor during 70 days of operation. A complete removal of FA was achieved for inlet concentration up to 425.5 mg L-1 and the initial specific biodegradation rate reached to its maximum value about 44.3 mg gcell-1 h-1 at 425.5 mg L-1. However, further increase of inlet concentration resulted in decrease of the biodegradation performance of the immobilized cells due to the inhibitory effect of FA on the enzymatic system involved in the biodegradation process. Based on kinetic modeling results, the Luong equation with the following constants could best describe the behavior of the bio-system: maximum specific FA biodegradation rate (qmax) of 124 mg gcell-1 h-1, half-saturation constant (KS) of 337.2 mg L-1, maximum degradable FA concentration (Smax) of 1582 mg L-1, and shape factor (n) of 1.49. Also, three-dimensional simulation of the bioreactor was performed using an integrated computational fluid dynamics (CFD) approach that takes into account both the biokinetic constants of the immobilized system as well as the fluid properties under steady-state condition. Eulerian computations successfully anticipated the concentration gradients through the reactor for different inlet FA concentrations, and uniform vertical velocity pathlines and non-dispersed plug flow inside the reactor were verified by the presented velocity distribution and flow streamlines.

Carbon monoxide conversion with Clostridium aceticum.

Carbon monoxide concentrations in syngas are often high, but tolerance toward CO varies a lot between homoacetogenic bacteria. Analysis of the autotrophic potential revealed that the first isolated acetogenic bacterium Clostridium aceticum was able to use CO as sole carbon and energy source for chemolithoautotrophic carbon fixation but simultaneously showed little tolerance to high CO concentrations. Not yet reported, autotrophic ethanol production by C. aceticum was discovered with CO as a substrate in batch processes. Growth rates estimated in batch processes at varying CO partial pressures were used to identify the CO inhibition kinetics of C. aceticum, using a substrate inhibition model. C. aceticum shows a strong CO inhibition with an optimum CO partial pressure of only 5.4 mbar in the gas phase at cell dry weight concentrations of up to 0.5 g·L -1 . At optimum conditions, growth and acetate formation rates were estimated to be 0.24 hr -1 and 0.52 g·g -1 ·hr -1 , respectively. Syngas fermentation at high partial pressures of up to 280 mbar CO in the inlet gas phase was enabled by applying a continuously operated stirred-tank bioreactor with submerged membranes with total cell retention. Around 70% CO conversion was achieved continuously in the membrane bioreactor with strongly CO inhibited C. aceticum resulting in space-time yields of up to 0.85 g·L -1 ·hr -1 acetate.

Kinetic and structural study of broccoli myrosinase and its interaction with different glucosinolates.

Myrosinase is a glycosylated enzyme present in the Brassicaceae family that catalyzes the hydrolysis of glucoraphanin to yield sulforaphane, recognized as a health-promoting compound found in cruciferous foods. Broccoli myrosinase has been poorly characterized. In this work, the enzyme was purified from broccoli florets and its kinetic behaviour was analyzed. The cDNA of broccoli myrosinase was isolated and sequenced to obtain the amino acids sequence of the enzyme. A three-dimensional structural model of a broccoli myrosinase subunit was built and used to perform molecular docking simulations with glucoraphanin and other glucosinolates. Kinetic data were adjusted to the Two-Binding Sites Model that describes substrate inhibition, obtaining R2 higher than 97%. The docking simulations confirmed the existence of two substrate-binding sites in the monomer, and allowed identifying the residues that interact with the substrate in each site. Our findings will help to design strategies to better exploit the health-promoting properties of broccoli.

Biodegradation kinetics of o-cresol by Pseudomonas putida DSM 548 (pJP4) and o-cresol removal in a batch-recirculation bioreactor system

The biodegradation kinetics of o-cresol was examined by acclimatized P. putida DSM 548 (pJP4) in batch experiments at varying initial o-cresol concentrations (from 50 to 500 mg/L). The kinetic parameters of o-cresol aerobic biodegradation were estimated by using the Haldane substrate inhibition equation. The biodegradation kinetics of o-cresol was investigated. In batch culture reactors, the Maximum specific growth rate (μmax), Monod constant (Ks) and the inhibition constant (Ki) were established as 0.519 h-1, 223.84 mg/L and 130.883 mg/L, respectively. o-cresol biodegradation in a batch-recirculation bioreactor system by immobilized P. putida was also studied. The recycled packed bed reactor system, which was composed of Ca-alginate beads and pumice on which cells immobilized, has been performed to determine possible stability for further developments.