Patch and landscape effects on forest-dependent dung beetles are masked by matrix-tolerant dung beetles in a mountaintop rainforest archipelago.

Naturally fragmented landscapes provide suitable scenarios through which to investigate patch and landscape effects on biodiversity patterns in areas that are isolated from the disturbances usually associated with human-made fragments. We aimed to investigate the patch and landscape effects on the diversity of forest-dependent and matrix-tolerant dung beetles in a naturally fragmented landscape. We also assessed the influence that seasonal and vegetation variations had on these dung beetles. We sampled dung beetles during two summers and two winters in 14 forest islands of various sizes and shapes within a natural mountainous forest archipelago in southeast Brazil. We measured the patch and landscape variables based on high-resolution multispectral images of circular sectors with radii of 100, 250, and 500 m. We used generalized linear mixed models to relate dung beetle metrics to patch and landscape attributes. The interaction between canopy cover and season influenced both species' richness and abundance of the dung beetle metacommunity. The forest-dependent species' richness increased with greater canopy cover, regardless of the season. Patch attributes (e.g., size, canopy cover, distance to the closest patch, and distance to continuous forest) and landscape attributes (e.g., percentage of forest in the landscape, total edge, number of patches, distance to the nearest neighbor, and shape complexity) had small general effects on dung beetle species as a whole and on matrix-tolerant species in particular. However, these values strongly influenced forest-dependent species' richness, abundance, and temporal beta diversity. The matrix-tolerant species, therefore, mask the effects of patch and landscape effects on forest-dependent species within the mountainous forest archipelago. In other words, the changes in these patch and landscape attributes influenced forest-dependent and matrix-tolerant species differently. Therefore, the evaluation of entire metacommunities may not be helpful when evaluating species-specific responses in mixed landscapes-a fact that impairs the conservation of forest-dependent species.

Phylogeography of a widespread lizard complex reflects patterns of both geographic and ecological isolation.

A primary challenge for modern phylogeography is understanding how ecology and geography, both contemporary and historical, shape the spatial distribution and evolutionary histories of species. Phylogeographic patterns are the result of many factors, including geology, climate, habitat, colonization history and lineage-specific constraints. Assessing the relative influences of these factors is difficult because few species, regions and environments are sampled in enough detail to compare competing hypotheses rigorously and because a particular phylogeographic pattern can potentially result from different evolutionary scenarios. The silky anoles (Anolis sericeus complex) of Central America and Mexico are abundant and found in all types of lowland terrestrial habitat, offering an excellent opportunity to test the relative influences of the factors affecting diversification. Here, we performed a range-wide statistical phylogeographic analysis on restriction site-associated DNA (RAD) markers from silky anoles and compared the phylogeographic patterns we recovered to historical and contemporary environmental and topographic data. We constructed niche models to compare niche overlap between sister lineages and conducted coalescent simulations to characterize how the major lineages of silky anoles have diverged. Our results revealed that the mode of divergence for major lineage diversification events was geographic isolation, resulting in ecological divergence between lineages, followed by secondary contact. Moreover, comparisons of parapatric sister lineages suggest that ecological niche divergence contributed to isolation by environment in this system, reflecting the natural history differences among populations in divergent environments.

Incipient sympatric speciation in Midas cichlid fish from the youngest and one of the smallest crater lakes in Nicaragua due to differential use of the benthic and limnetic habitats?

Understanding how speciation can occur without geographic isolation remains a central objective in evolutionary biology. Generally, some form of disruptive selection and assortative mating are necessary for sympatric speciation to occur. Disruptive selection can arise from intraspecific competition for resources. If this competition leads to the differential use of habitats and variation in relevant traits is genetically determined, then assortative mating can be an automatic consequence (i.e., habitat isolation). In this study, we caught Midas cichlid fish from the limnetic (middle of the lake) and benthic (shore) habitats of Crater Lake Asososca Managua to test whether some of the necessary conditions for sympatric speciation due to intraspecific competition and habitat isolation are given. Lake As. Managua is very small (<900 m in diameter), extremely young (maximally 1245 years of age), and completely isolated. It is inhabited by, probably, only a single endemic species of Midas cichlids, Amphilophus tolteca. We found that fish from the limnetic habitat were more elongated than fish collected from the benthic habitat, as would be predicted from ecomorphological considerations. Stable isotope analyses confirmed that the former also exhibit a more limnetic lifestyle than the latter. Furthermore, split-brood design experiments in the laboratory suggest that phenotypic plasticity is unlikely to explain much of the observed differences in body elongation that we observed in the field. Yet, neutral markers (microsatellites) did not reveal any genetic clustering in the population. Interestingly, demographic inferences based on RAD-seq data suggest that the apparent lack of genetic differentiation at neutral markers could simply be due to a lack of time, as intraspecific competition may only have begun a few hundred generations ago.