Long-term seedling and small sapling census data from the Barro Colorado Island 50 ha Forest Dynamics Plot, Panama.

Tropical forests are well known for their high woody plant diversity. Processes occurring at early life stages are thought to play a critical role in maintaining this high diversity and shaping the composition of tropical tree communities. To evaluate hypothesized mechanisms promoting tropical tree species coexistence and influencing composition, we initiated a census of woody seedlings and small saplings in the permanent 50 ha Forest Dynamics Plot (FDP) on Barro Colorado Island (BCI), Panama. Situated in old-growth, lowland tropical moist forest, the BCI FDP was originally established in 1980 to monitor trees and shrubs ≥1 cm diameter at 1.3 m above ground (dbh) at ca. 5-year intervals. However, critical data on the dynamics occurring at earlier life stages were initially lacking. Therefore, in 2001 we established a 1-m2 seedling plot in the center of every 5 × 5 m section of the BCI FDP. All freestanding woody individuals ≥20 cm tall and <1 cm dbh (hereafter referred to as seedlings) were tagged, mapped, measured, and identified to species in 19,313 1-m2 seedling plots. Because seedling dynamics are rapid, we censused these seedling plots every 1-2 years. Here, we present data from the 14 censuses of these seedling plots conducted between the initial census in 2001 to the most recent census, in 2018. This data set includes nearly 1 M observations of ~185,000 individuals of >400 tree, shrub, and liana species. These data will permit spatially-explicit analyses of seedling distributions, recruitment, growth, and survival for hundreds of woody plant species. In addition, the data presented here can be linked to openly-available, long-term data on the dynamics of trees and shrubs ≥1 cm dbh in the BCI FDP, as well as existing data sets from the site on climate, canopy structure, phylogenetic relatedness, functional traits, soil nutrients, and topography. This data set can be freely used for non-commercial purposes; we request that users of these data cite this data paper in all publications resulting from the use of this data set.

Recruitment of pioneer trees with physically dormant seeds under climate change: the case of Vachellia pennatula (Fabaceae) in semiarid environments of Mexico.

Most tree species native to arid and semiarid ecosystems produce seeds with physical dormancy, which have impermeable coats that protect them from desiccation and prevent germination when the environmental conditions are unfavorable for seedling establishment. This dormancy mechanism may confer some degree of tolerance to seeds facing warmer and drier conditions, as those expected in several regions of the world because of climate change. Scarification of these seeds (removal of protective coats) is required for stimulating germination and seedling development. However, as scarification exposes seeds to the external environmental conditions, it can promote desiccation and viability loss in the future. To test these hypotheses, we performed field experiments and sowed scarified and unscarified seeds of a pioneer tree native to semiarid ecosystems of Mesoamerica (Vachellia pennatula) under the current climate and simulated climate change conditions. The experiments were conducted at abandoned fields using open-top chambers to increase temperature and rainout shelters to reduce rainfall. We measured microenvironmental conditions within the experimental plots and monitored seedling emergence and survival during a year. Air temperature and rainfall in climate change simulations approached the values expected for the period 2041-2080. Seedling emergence rates under these climatic conditions were lower than under the current climate. Nevertheless, emergence rates in climate change simulations were even lower for scarified than for unscarified seeds, while the converse occurred under the current climate. On the other hand, although survival rates in climate change simulations were lower than under the current climate, no effects of the scarification treatment were found. In this way, our study suggests that climate change will impair the recruitment of pioneer trees in semiarid environments, even if they produce seeds with physical dormancy, but also indicates that these negative effects will be stronger if seeds are scarified.

Can intensive silvicultural management minimize the effects of frost on restoration plantations in subtropical regions?

Temperature is one of the main factors that influence field establishment of forest species. In high-altitude tropical regions and in subtropical regions, the occurrence of frost represents an important restriction in the trajectory and continuity of ecological processes. Thus, we aimed to characterize frost damage in nine native forest species under different silvicultural management schemes in plantations for the restoration of a riparian forest area in southern Brazil. The experiment was carried out in the Quarta Colônia State Park, and seedlings of nine native tree species, representing the Subtropical Seasonal Forest. Frost damage was measured using a visual damage scale based on the frost damage experienced in the winter of 2016. In addition, to evaluate the resilience of the species, height and diameter data were collected over the duration of the experiment. The species Solanum mauritianum was classified as frost resistant; therefore, we propose that it should be recommended for cultivation in regions where frost events usually occur. The other species studied, both the pioneers, S. terebinthifolius, Enterolobium contortisiliquum, Ceiba speciosa, and Inga marginata, as well as the secondary ones, Actinostemon concolor, Trichilia elegans, T. claussenii, and Eugenia rostrifolia, were influenced by the silvicultural management schemes used. Plants managed under intensive silviculture showed lower levels of frost damage and higher survival rates.

Post-seminal structure and development of the hemiparasitic plant Escobedia grandiflora (Orobanchaceae)

Escobedia grandiflora(L.f.) Kuntze is a wild hemiparasitic plant with orange roots. Little is known about the development of initial parasitism with the host, despite the significant value of roots for Central and South American communities. Therefore, this study aimed to characterize post-seminal structure and development of E. grandiflorain Pennisetum purpureumhost. To analyze the structure and development of E. grandiflora, seedlings, stems and roots samples were processed and examined underlight, confocal and scanning electron microscopy. Escobedia grandifloraseeds are composed of seed coat, perisperm, and embryo. Emergence of the radicle began eleven days after imbibition. Seedlings showed a root hair collar encircling the axis at the root-hypocotyl junction with elongation of internal cortical cells. Seedlings formed haustoria and successfully reached of the host roots 22 days following root emergence. In the root many starch grains were observed, albeit more scarce in the hypocotyl. After 43 days of root emergence, the seedling stage was finished with the formation of the definitive leaves, and star of the plant stage. After 64 days, root ramification, amount of starch, and orange pigmentation increased with formation of haustoria. The developmental pattern of E. grandiflora plants was slow, but the roots grew faster than the stem. Escobedia grandifloraseeds were not endospermic and have limited nutritional value. After root emergence, the young seedling must develop roots and starch storage towards to haustorium formation and attachment to host roots.

Species with greater seed mass are more tolerant of conspecific neighbours: a key driver of early survival and future abundances in a tropical forest.

Multiple niche-based processes including conspecific negative density dependence (CNDD) determine plant regeneration and community structure. We ask how interspecific and intraspecific density-dependent interactions relate to plant life histories and associated functional traits. Using hierarchical models, we analysed how such interactions affected first-year survival of seedling recruits of 175 species in a tropical forest, and how species abundances and functional traits are related to interspecific variation in density-dependent effects. Conspecific seedling neighbour effects prevailed over the effects of larger conspecific and all heterospecific neighbours. Tolerance of seedling CNDD enhanced recruit survival and subsequent abundance, all of which were greater among larger seeded, slow-growing and well-defended species. Niche differentiation along the growth-survival trade-off and tolerance of seedling CNDD strongly correlated with regeneration success, with manifest consequences for community structure. The ability of larger seeded species to better tolerate CNDD suggests a novel mechanism for CNDD to contribute to seed-size variation and promote species coexistence through a tolerance-fecundity trade-off.

Factors affecting establishment success of the endangered Caribbean cactus Harrisia portoricensis (Cactaceae)

Early plant stages may be the most vulnerable within the life cycle of plants especially in arid ecosystems. Interference from exotic species may exacerbate this condition. We evaluated germination, seedling survival and growth in the endangered Caribbean cactus Harrisia portoricensis, as a function of sunlight exposure (i.e., growing under open and shaded areas), different shade providers (i.e., growing under two native shrubs and one exotic grass species), two levels of predation (i.e., exclusion and non-exclusion) and variable microenvironmental conditions (i.e., temperature, PAR, humidity). Field experiments demonstrated that suitable conditions for germination and establishment of H. portoricensis seedling are optimal in shaded areas beneath the canopy of established species, but experiments also demonstrated that the identity of the shade provider can have a significant influence on the outcome of these processes. Harrisia portoricensis seedlings had higher probabilities of survival and grew better (i.e., larger diameters) when they were transplanted beneath the canopy of native shrubs, than beneath the exotic grass species, where temperature and solar radiation values were on average much higher than those obtained under the canopies of native shrubs. We also detected that exclusión from potential predators did not increase seedling survival. Our combined results for H. portoricensis suggested that the modification of microenvironmental conditions by the exotic grass may lower the probability of recruitment and establishment of this endangered cactus species. Rev. Biol. Trop. 60 (2): 867-879. Epub 2012 June 01.

Las etapas iniciales de las plantas parecen ser las más vulnerables de su ciclo de vida, especialmente en ecosistemas áridos. Interferencias de especies exóticas pueden exacerbar esta condición. Evaluamos la germinación, supervivencia y crecimiento de plántulas del cactus en peligro de extinción Harrisia portoricensis, en función de la exposición a la luz solar, diferentes proveedores de sombra, exclusión de potenciales depredadores y condiciones micro-ambientales variables. Los experimentos demostraron que las condiciones adecuadas para la germinación y el establecimiento de plántulas de H. portoricensis son óptimas en áreas de sombra, bajo el dosel de especies establecidas, pero también demostraron que la identidad de los proveedores de sombra puede tener una influencia significativa sobre los resultados de estos procesos y que la exclusión de depredadores no aumentó la probabilidad de supervivencia de las plántulas. Las plántulas de H. portoricensis tuvieron mayores probabilidades de supervivencia y crecieron mejor cuando fueron transplantadas bajo la sombra de los arbustos nativos que bajo la sombra del pasto exótico, donde la temperatura y la radiación solar fueron en promedio mucho mayores que las obtenidas bajo la sombra de los arbustos nativos. Nuestros resultados sugieren que las modificaciones de las condiciones micro-ambientales por este pasto exótico pueden disminuir la probabilidad de reclutamiento y establecimiento de esta especie en peligro.

Phenology, seed dispersal and difficulties in natural recruitment of the canopy tree Pachira quinata (Malvaceae)

Life history and recruitment information of tropical trees in natural populations is scarce even for important commercial species. This study focused on a widely exploited Neotropical canopy species, Pachiraquinata (Malvaceae), at the southernmost, wettest limit of its natural distribution, in the Colombian Amazonia. We studied phenological patterns, seed production and natural densities; assessed the importance of seed dispersal and density-dependent effects on recruitment, using field experiments. At this seasonal forest P. quinata was overrepresented by large adult trees and had very low recruitment caused by the combination of low fruit production, high seed predation and very high seedling mortality under continuous canopies mostly due to damping off pathogens. There was no evidence of negative distance or density effects on recruitment, but a clear requirement of canopy gaps for seedling survival and growth, where pathogen incidence was drastically reduced. In spite of the strong dependence on light for survival of seedlings, seeds germinated readily in the dark. At the study site, the population of P. quinata appeared to be declining, likely because recruitment depended on the rare combination of large gap formation with the presence of reproductive trees nearby. The recruitment biology of this species makes it very vulnerable to any type of logging in natural populations. Rev. Biol. Trop. 59 (2): 921-933. Epub 2011 June 01.

Información acerca de la historia de vida y reclutamiento de poblaciones naturales de árboles tropicales es escasa, incluso para especies de alto interés comercial. Este estudio se centró en una especie de dosel altamente explotada, Pachira quinata (Malvaceae), en la zona más húmeda de su distribución geográfica, en la Amazoní a colombiana. Estudiamos sus patrones fenológicos, producción de semillas y densidades naturales, además de la importancia de la dispersión de semillas y efectos denso-dependientes en el reclutamiento natural, todo lo anterior se logró con el uso de experimentos y observaciones en el campo. En este bosque estacional, la población de P. quinata estaba dominada por grandes árboles adultos y el reclutamiento era extremadamente bajo, como consecuencia de la baja producción de frutos, alta depredación de semillas y muy alta mortalidad de plántulas bajo el bosque por infección de patógenos. No encontramos evidencia de efectos de distancia al árbol parental o densidad de semillas en el reclutamiento, pero si hallamos un evidente requerimiento de claros de luz para la supervivencia y el crecimiento de plántulas, donde la mortalidad por patógenos se reduce drásticamente. Sin embargo, a pesar de la dependencia de la luz para la supervivencia, las semillas germinan en la oscuridad. En la zona de estudio, la población de P. quinata parece estar en claro declive, probablemente porque el reclutamiento depende de la coincidencia de la formación de grandes claros con la presencia cercana de árboles reproductivos. Los requerimientos de reclutamiento de esta especie la hacen muy vulnerable a cualquier actividad extractiva de árboles adultos en poblaciones naturales.

Crecimiento, supervivencia y herbivoría de plántulas de Brosimum alicastrum (Moraceae), una especie del sotobosque neotropical

Growth, survival and herbivory of seedlings in Brosimum alicastrum (Moraceae), a species from the Neotropical undergrowth. Growth responses, survival, and herbivory, on seedlings of Brosimum alicastrum were studied in a neotropical Mexican forest. We selected 122 seedlings and divided them into three groups assigned to defoliation treatments: control or 0 (n=21), 50 (n=51) and 90% (n=50). Every 4 months during two years we measured seedling growth (in terms of relative growth rate in biomass, leaf area growth, produced leaves and height growth) and survival. In addition, we evaluated every 12 months pathogen damage and insect herbivory using a 2 mm-2 grid. Separately, we estimated mammal herbivory in 3-month old seedlings that were selected within a plot of 500 m x 10 m (N=1095). Pathogen damage and insect herbivory were evaluated within the same plot in 113 seedlings. We found that 50 % defoliated seedlings showed compensatory responses in all growth parameters. Relative growth rate and height growth also had a compensatory response in seedlings at 90% defoliation. Relative growth rate and leaf area growth gradually decreased with time although height growth seedling showed an opposite pattern. Leaves produced were not affected by time. Estimated seedling survival probability increased with defoliation to a maximum of 97%, decreasing at 24 month to 37%. Mammal herbivory was more frequent and severe than herbivory caused by pathogens and insects. In some cases, mammal herbivory produced total defoliation. Compensatory growth in leaf area growth, produced leaves and height growth seedling suggest a synergic compensatory mechanism expressed in a whole-plant growth biomass (relative growth rate). Compensation and survival results suggest trade-offs at the leaf level, such as leaf area growth and produced leaves versus chemical defenses, respectively. Rev. Biol. Trop. 56 (4): 2055-2067. Epub 2008 December 12.

Se estudiaron las respuestas de crecimiento, supervivencia y los diferentes tipos de herbivoría sobre plántulas de B. alicastrum en una selva neotropical de México. Se seleccionaron 122 plántulas de una población las cuales se asignaron a tres tratamientos de defoliación: control o 0% (n=21), 50% (n=51) y 90% (n=50). Cada 4 meses durante dos años se midió su crecimiento (en términos de la tasa relativa de crecimiento en biomasa, área foliar, hojas producidas y altura) y supervivencia. Además cada 12 meses, mediante el uso de una cuadricula de 2mm-2, se evaluó la herbivoría causada por patógenos e insectos. También dentro de una parcela de 500 m largo x 10 m de ancho se evaluó en 1095 plántulas de 3 meses de edad la herbivoría por mamíferos. En la misma parcela pero en 113 plántulas se estimó la herbivoría por patógenos e insectos. Las plántulas defoliadas al 50% compensaron su crecimiento en todas las estructuras medidas, pero sólo la tasa relativa de crecimiento y altura lo hicieron con la defoliación al 90%. La tasa relativa de crecimiento y el área foliar disminuyeron gradualmente con el tiempo, contrario a la altura con un patrón opuesto. El número de hojas producidas no se afectó por el tiempo. La probabilidad estimada de supervivencia incrementó hasta un 95% con la defoliación y disminuyó hasta un 37% a los 24 meses. La herbivoría por mamíferos fue el más incidente y severo, en algunos casos hasta un 100% de defoliación. En tanto la causada por patógenos e insectos fue secundaria. El crecimiento compensatorio en área foliar, producción de hojas y altura sugieren un mecanismo compensatorio sinérgico expresado a nivel del crecimiento individual de la planta (tasa de crecimiento en biomasa). Al mismo tiempo junto con la supervivencia sugiere un posible compromiso entre las respuestas de crecimiento a nivel de la hoja - área foliar y hojas producidas - versus producción de defensas químicas.