Within-host competition can delay evolution of drug resistance in malaria.

In the malaria parasite P. falciparum, drug resistance generally evolves first in low-transmission settings, such as Southeast Asia and South America. Resistance takes noticeably longer to appear in the high-transmission settings of sub-Saharan Africa, although it may spread rapidly thereafter. Here, we test the hypothesis that competitive suppression of drug-resistant parasites by drug-sensitive parasites may inhibit evolution of resistance in high-transmission settings, where mixed-strain infections are common. We employ a cross-scale model, which simulates within-host (infection) dynamics and between-host (transmission) dynamics of sensitive and resistant parasites for a population of humans and mosquitoes. Using this model, we examine the effects of transmission intensity, selection pressure, fitness costs of resistance, and cross-reactivity between strains on the establishment and spread of resistant parasites. We find that resistant parasites, introduced into the population at a low frequency, are more likely to go extinct in high-transmission settings, where drug-sensitive competitors and high levels of acquired immunity reduce the absolute fitness of the resistant parasites. Under strong selection from antimalarial drug use, however, resistance spreads faster in high-transmission settings than low-transmission ones. These contrasting results highlight the distinction between establishment and spread of resistance and suggest that the former but not the latter may be inhibited in high-transmission settings. Our results suggest that within-host competition is a key factor shaping the evolution of drug resistance in P. falciparum.

Eco-geographic adaptations in the human ribcage throughout a 3D geometric morphometric approach.

OBJECTIVES: According to eco-geographic rules, humans from high latitude areas present larger and wider trunks than their low-latitude areas counterparts. This issue has been traditionally addressed on the pelvis but information on the thorax is largely lacking. We test whether ribcages are larger in individuals inhabiting high latitudes than in those from low latitudes and explored the correlation of rib size with latitude. We also test whether a common morphological pattern is exhibited in the thorax of different cold-adapted populations, contributing to their hypothetical widening of the trunk. MATERIALS AND METHODS: We used 3D geometric morphometrics to quantify rib morphology of three hypothetically cold-adapted populations, viz. Greenland (11 individuals), Alaskan Inuit (8 individuals) and people from Tierra del Fuego (8 individuals), in a comparative framework with European (Spain, Portugal and Austria; 24 individuals) and African populations (South African and sub-Saharan African; 20 individuals). RESULTS: Populations inhabiting high latitudes present longer ribs than individuals inhabiting areas closer to the equator, but a correlation (p < 0.05) between costal size and latitude is only found in ribs 7-11. Regarding shape, the only cold adapted population that was different from the non-cold-adapted populations were the Greenland Inuit, who presented ribs with less curvature and torsion. CONCLUSIONS: Size results from the lower ribcage are consistent with the hypothesis of larger trunks in cold-adapted populations. The fact that only Greenland Inuit present a differential morphological pattern, linked to a widening of their ribcage, could be caused by differences in latitude. However, other factors such as genetic drift or specific cultural adaptations cannot be excluded and should be tested in future studies.

Lipid signalling mediated by PLD/PA modulates proline and H2O2 levels in barley seedlings exposed to short- and long-term chilling stress.

Phospholipase D (PLD) hydrolyses phospholipids to yield phosphatidic acid (PA) and a head group, and is involved in responses to a variety of environmental stresses, including chilling and freezing stress. Barley responses to chilling stress (induced by incubating seedlings at 4 °C) are dynamic and the duration of stress, either short (0-180 min) or long-term (24-36 h) had a significant impact on the response. We investigated the roles of PLD/PA in responses of barley (Hordeum vulgare) seedlings to short and long-term chilling stress, based on regulation of proline and reactive oxygen species (ROS) levels. Short-term chilling stress caused rapid and transient increases in PLD activity, proline level, and ROS levels in young leaves. PLD has the ability to catalyse the transphosphatidylation reaction leading to formation of phosphatidylalcohol (preferentially, to PA). Pre-treatment of seedlings with 1-butanol significantly increased proline synthesis but decreased ROS (H2O2) formation. These observations suggest that PLD is a negative regulator of proline synthesis, whereas PA/PLD promote ROS signals. Exogenous PA pre-treatment reduced the proline synthesis but enhanced H2O2 formation. Effects of long-term chilling stress on barley seedlings differed from those of short-term chilling stress. E.g., PLD activity was significantly reduced in young leaves and roots, whereas proline synthesis and ROS signals were increased in roots. Exogenous ROS application enhanced proline level while exogenous proline application reduced ROS level and modulated some effects of long-term chilling stress. Our findings suggest that PLD contributes to signalling pathways in responses to short-term chilling stress in barley seedling, through regulation of the balance between proline and ROS levels. In contrast, reduced PLD activity in the response to long-term chilling stress did not affect proline level. Increased ROS levels may reflect an antioxidant system that is affected by chilling stress and positively compensated by changes in proline level. Implications of our findings are discussed in regard to adaptation strategies of barley seedlings to low temperatures.

Ontogenetic and life history trait changes associated with convergent ecological specializations in extinct ungulate mammals.

Investigating life history traits in mammals is crucial to understand their survival in changing environments. However, these parameters are hard to estimate in a macroevolutionary context. Here we show that the use of dental ontogenetic parameters can provide clues to better understand the adaptive nature of phenotypic traits in extinct species such as South American notoungulates. This recently extinct order of mammals evolved in a context of important geological, climatic, and environmental variations. Interestingly, notoungulates were mostly herbivorous and acquired high-crowned teeth very early in their evolutionary history. We focused on the variations in crown height, dental eruption pattern, and associated body mass of 69 notoungulate taxa, placed in their phylogenetic and geological contexts. We showed that notoungulates evolved higher crowns several times between 45 and 20 Ma, independently of the variation in body mass. Interestingly, the independent acquisitions of ever-growing teeth were systematically accompanied by eruption of molars faster than permanent premolars. These repeated associations of dental innovations have never been documented for other mammals and raise questions on their significance and causal relationships. We suggest that these correlated changes could originate from ontogenetic adjustments favored by structural constraints, and may indicate accelerated life histories. Complementarily, these more durable and efficient dentitions could be selected to cope with important ingestions of abrasive particles in the context of intensified volcanism and increasing aridity. This study demonstrates that assessing both life history and ecological traits allows a better knowledge of the specializations of extinct mammals that evolved under strong environmental constraints.

The sunflower transcription factor HaHB11 confers tolerance to water deficit and salinity to transgenic Arabidopsis and alfalfa plants.

Homeodomain-leucine zipper (HD-Zip) transcription factors are unique to the plant kingdom; members of subfamily I are known to be involved in abiotic stress responses. HaHB11 belongs to this subfamily and it was previously shown that it is able to confer improved yield and tolerance to flooding via a quiescent strategy. Here we show that HaHB11 expression is induced by ABA, NaCl and water deficit in sunflower seedlings and leaves. Arabidopsis transgenic plants expressing HaHB11, controlled either by its own promoter or by the constitutive 35S CaMV, presented rolled leaves and longer roots than WT when grown under standard conditions. In addition, these plants showed wider stems and more vascular bundles. To deal with drought, HaHB11 transgenic plants closed their stomata faster and lost less water than controls, triggering an enhanced tolerance to such stress condition and also to salinity stress. Concomitantly, ABA-synthesis and sensing related genes were differentially regulated in HaHB11 transgenic plants. Either under long-term salinity stress or mild drought stress, HaHB11 transgenic plants did not exhibit yield penalties. Moreover, alfalfa transgenic plants were generated which also showed enhanced drought tolerance. Altogether, the results indicated that HaHB11 was able to confer drought and salinity tolerance via a complex mechanism which involves morphological, physiological and molecular changes.

Aislados de Bacillus provenientes de la rizósfera de cactus incrementan la germinación y la floración en Mammillaria spp. (Cactaceae) / Bacillus isolates from rhizosphere of cacti improve germination and bloom in Mammillaria spp. (Cactaceae)

Las cactáceas son la vegetación característica de las zonas áridas en México, donde las lluvias son escasas, la evapotranspiración es elevada y la fertilidad de los suelos es baja. Las plantas han desarrollado estrategias fisiológicas como la asociación con microorganismos en la zona de la rizósfera para incrementar la captación de nutrientes. En el presente trabajo se obtuvieron 4 aislados bacterianos de la rizósfera de Mammillaria magnimamma y Coryphantha radians, los que fueron nombrados como QAP3, QAP19, QAP22 y QAP24 e identificados genéticamente como pertenecientes al género Bacillus. Estos aislados exhibieron in vitro propiedades bioquímicas como solubilización de fosfatos, producción de ácido indolacético y actividad ACC deaminasa, que se relacionan con la promoción del crecimiento de las plantas. Dicha promoción fue ensayada inoculando semillas de M. magnimamma y evaluando luego algunos parámetros. Se encontró que todos los aislados incrementaron la germinación desde un 17% hasta un 34,3% (con respecto a las semillas testigo sin inocular); el aislado QAP24 fue el que presentó el mayor efecto en este sentido y permitió la germinación de todas las semillas viables (84,7%) 3 días antes que en el testigo. La inoculación de este aislado en plantas de Mammillaria zeilmanniana mostró un efecto positivo sobre la floración: en 2 meses dentro del período de un año se detectó un incremento en el número de plantas en floración con respecto a las plantas testigo, de hasta el 31,0% en uno de ellos. Se concluye que los aislados de Bacillus spp. caracterizados poseen potencial para ser empleados en programas de conservación de especies vegetales de zonas áridas.

Cacti are the most representative vegetation of arid zones in Mexico where rainfall is scarce, evapotranspiration is high and soil fertility is low. Plants have developed physiological strategies such as the association with microorganisms in the rhizosphere zone to increase nutrient uptake. In the present work, four bacterial isolates from the rhizosphere of Mammillaria magnimamma and Coryphantha radians were obtained and named as QAP3, QAP19, QAP22 and QAP24, and were genetically identified as belonging to the genus Bacillus, exhibiting in vitro biochemical properties such as phosphate solubilization, indoleacetic acid production and ACC deaminase activity related to plant growth promotion, which was tested by inoculating M. magnimamma seeds. It was found that all isolates increased germination from 17 to 34.3% with respect to the uninoculated control seeds, being QAP24 the one having the greatest effect, accomplishing the germination of viable seeds (84.7%) three days before the control seeds. Subsequently, the inoculation of Mammillari zeilmanniana plants with this isolate showed a positive effect on bloom, registering during two months from a one year period, an increase of up to 31.0% in the number of flowering plants compared to control plants. The characterized Bacillus spp. isolates have potential to be used in conservation programs of plant species from arid zones.

Recurso polínico y ciclo estacional de Thygater aethiops (Hymenoptera: Apidae) en un ambiente urbano (Bogotá-Colombia) / Pollen resource and seasonal cycle of Thygater aethiops (Hymenoptera: Apidae) in an urban environment (Bogotá-Colombia)

ResumenThygater aethiops es una abeja nativa que puede encontrarse en parques y jardines en diversas áreas urbanas como aquellas de la ciudad de Bogotá (Colombia). Sin embargo, es poco lo que se conoce sobre su biología y sus adaptaciones ecológicas a áreas urbanas. El presente estudio tuvo como objetivos describir ciclos estacionales y la actividad de forrajeo diaria de T. aethiops, así como identificar el recurso polínico usado por estas abejas a lo largo de un año en una población que nidifica en un agregado en el "Parque Nacional Enrique Olaya Herrera" de Bogotá. Cambios en la actividad de nidificación fueron registrados semanalmente contando el número de nidos activos en el agregado entre diciembre/2012 y febrero/2014. Para determinar el horario de forrajeo diario, se contó el número de abejas que entraban a sus nidos en un periodo de 10 minutos cada hora entre las 8:00 y las 14:00 h. Semanalmente se capturaron hembras que estuvieran regresando a sus nidos con cargas de polen, entre septiembre/2012 y agosto/2013; dichas cargas fueron analizadas. Se observó tres picos de nidificación tras los picos de precipitación, pero el número de nidos activos no estuvo correlacionado con la precipitación. El número de nidos activos se redujo (20-50 % de los nidos) después de que se registrara un disturbio antrópico en el área de nidificación. Las abejas forrajean por polen y néctar entre las 8:00 y 14:00 h con un pico de actividad a las 10:00 h. La actividad de forrajeo diaria cambió durante el periodo de estudio debido a disturbios antrópicos. No hubo una relación significativa entre la temperatura del aire y el número de entradas a los nidos. El horario de actividad no cambió entre los periodos secos y lluviosos. Se encontró un total de 26 tipos polínicos en 169 cargas de polen. Ulex europaeus (Fabaceae) y Solanum laxum (Solanaceae) fueron las plantas más abundantes representadas en las cargas de polen durante todo el periodo de estudio. De acuerdo a estos resultados, T. aethios sería considerada una especie mesoléctica. La habilidad de T. aethiops para utilizar diferentes recursos polínicos tanto nativos como introducidos, así como su presumible capacidad para recuperar su población después de disturbios son características que le pueden haber permitido adaptarse a ambientes urbanos. El conocimiento de los recursos florales, así como otras características biológicas de esta abeja son importantes para promover su conservación en áreas urbanas.

Abstract:Thygater aethiops is a native bee that can be found in parks and gardens in diverse urban areas such as those in the city of Bogotá (Colombia). However, little is known about its biology as well as ecological adaptations to urban areas. This study aimed to describe the seasonal cycle and daily foraging activities of T. aethiops, as well as identify the pollen resources used by this bee over a year in a population nesting in an aggregation in the "Parque Nacional Enrique Olaya Herrera" in Bogotá. Changes in the nest activity were monitored weekly by counting the number of active nests in the aggregation between December/2012 and February/2014. To determine the daily foraging activity, the numbers of bees entering their nests over a period of 10 minutes every hour between 8:00 and 14:00 h were recorded. Females with pollen loads entering to their nest were captured weekly, between September/2012 and August/2013, and their pollen loads analyzed. Three nesting peaks occurred after the precipitation peaks, but the number of active nests was not correlated with precipitation. The nesting activities stopped in a large number of the active nests (20-50 % of nests) after an anthropic disturbance was registered in the nesting area. Bees forage for nectar and pollen between 8:00 and 14:00 h, with a peak at 10:00 h. Daily foraging activity changed during the study period due to anthropic disturbance. There was not a significant relationship between air temperature and the number of females entering their nests. Foraging activities did not change between the dry and rainy seasons. A total of 26 pollen types were found in 169 pollen loads. Ulex europaeus (Fabaceae) and Solanum laxum (Solanaceae) were the most abundant plants represented on the pollen load across the study period. According to these results, T. aethiops would be considered a mesolectic species. The ability of T. aethiops to use different pollen resources both native and exotic, as well as to presumably recover its population after disturbances, are characteristics that may have allowed this bee to adapt to urban environments. Knowledge on the floral resources as well as other biological features of this bee species is important to promote its conservation in urban areas. Rev. Biol. Trop. 64 (3): 1247-1257. Epub 2016 September 01.

Modulation of the pH Stability of Influenza Virus Hemagglutinin: A Host Cell Adaptation Strategy.

Proteins undergo dynamic structural changes to function within the range of physical and chemical conditions of their microenvironments. Changes in these environments affect their activity unless the respective mutations preserve their proper function. Here, we examine the influenza A virus spike protein hemagglutinin (HA), which undergoes a dynamic conformational change that is essential to the viral life cycle and is dependent on endosomal pH. Since the cells of different potential hosts exhibit different levels of pH, the virus can only cross species barriers if HA undergoes mutations that still permit the structural change to occur. This key event occurs after influenza A enters the host cell via the endocytic route, during its intracellular transport inside endosomes. The acidic pH inside these vesicles triggers a major structural transition of HA that induces fusion of the viral envelope and the endosomal membrane, and permits the release of the viral genome. HA experiences specific mutations that alter its pH stability and allow the conformational changes required for fusion in different hosts, despite the differences in the degree of acidification of their endosomes. Experimental and theoretical studies over the past few years have provided detailed insights into the structural aspects of the mutational changes that alter its susceptibility to different pH thresholds. We will illustrate how such mutations modify the protein's structure and consequently its pH stability. These changes make HA an excellent model of the way subtle structural modifications affect a protein's stability and enable it to function in diverse environments.

Genome of Plant Maca (Lepidium meyenii) Illuminates Genomic Basis for High-Altitude Adaptation in the Central Andes.

Maca (Lepidium meyenii Walp, 2n = 8x = 64), belonging to the Brassicaceae family, is an economic plant cultivated in the central Andes sierra in Peru (4000-4500 m). Considering that the rapid uplift of the central Andes occurred 5-10 million years ago (Ma), an evolutionary question arises regarding how plants such as maca acquire high-altitude adaptation within a short geological period. Here, we report the high-quality genome assembly of maca, in which two closely spaced maca-specific whole-genome duplications (WGDs; ∼6.7 Ma) were identified. Comparative genomic analysis between maca and closely related Brassicaceae species revealed expansions of maca genes and gene families involved in abiotic stress response, hormone signaling pathway, and secondary metabolite biosynthesis via WGDs. The retention and subsequent functional divergence of many duplicated genes may account for the morphological and physiological changes (i.e., small leaf shape and self-fertility) in maca in a high-altitude environment. In addition, some duplicated maca genes were identified with functions in morphological adaptation (i.e., LEAF CURLING RESPONSIVENESS) and abiotic stress response (i.e., GLYCINE-RICH RNA-BINDING PROTEINS and DNA-DAMAGE-REPAIR/TOLERATION 2) under positive selection. Collectively, the maca genome provides useful information to understand the important roles of WGDs in the high-altitude adaptation of plants in the Andes.

[Pollen resource and seasonal cycle of Thygater aethiops (Hymenoptera: Apidae) in an urban environment (Bogotá-Colombia)]. / Recurso polínico y ciclo estacional de Thygater aethiops (Hymenoptera: Apidae) en un ambiente urbano (Bogotá-Colombia).

Thygater aethiops is a native bee that can be found in parks and gardens in diverse urban areas such as those in the city of Bogotá (Colombia). However, little is known about its biology as well as ecological adaptations to urban areas. This study aimed to describe the seasonal cycle and daily foraging activities of T. aethiops, as well as identify the pollen resources used by this bee over a year in a population nesting in an aggregation in the "Parque Nacional Enrique Olaya Herrera" in Bogotá. Changes in the nest activity were monitored weekly by counting the number of active nests in the aggregation between December/2012 and February/2014. To determine the daily foraging activity, the numbers of bees entering their nests over a period of 10 minutes every hour between 8:00 and 14:00 h were recorded. Females with pollen loads entering to their nest were captured weekly, between September/2012 and August/2013, and their pollen loads analyzed. Three nesting peaks occurred after the precipitation peaks, but the number of active nests was not correlated with precipitation. The nesting activities stopped in a large number of the active nests (20-50 % of nests) after an anthropic disturbance was registered in the nesting area. Bees forage for nectar and pollen between 8:00 and 14:00 h, with a peak at 10:00 h. Daily foraging activity changed during the study period due to anthropic disturbance. There was not a significant relationship between air temperature and the number of females entering their nests. Foraging activities did not change between the dry and rainy seasons. A total of 26 pollen types were found in 169 pollen loads. Ulex europaeus (Fabaceae) and Solanum laxum (Solanaceae) were the most abundant plants represented on the pollen load across the study period. According to these results, T. aethiops would be considered a mesolectic species. The ability of T. aethiops to use different pollen resources both native and exotic, as well as to presumably recover its population after disturbances, are characteristics that may have allowed this bee to adapt to urban environments. Knowledge on the floral resources as well as other biological features of this bee species is important to promote its conservation in urban areas.

The Brazilian semi-arid environment influences the physiological responses of goats / O ambiente semiárido brasileiro influencia as respostas fisiológicas de caprinos

In this review, we compile information about the physiologic responses of goats to north-eastern Brazils semiarid environment and suggest some strategies to avoid the thermal discomfort of these small ruminants. Due to recent weather changes, the number of studies seeking to improve animal welfare has intensified to minimize the economic losses on animal production in the tropics. Among the climatic variables, the high room temperature, air humidity, and direct solar radiation are the main causes of physiological discomfort in animals that decrease their productivity. Therefore, it is very important to study the components that interact in the thermoregulation process, the consequences of disequilibrium in this process, and ways to ease these effects, aiming to provide thermal comfort to and seek the animal welfare of the animals. Therefore, it is essential to know the interaction between animals and the environment and the adaptability of the species and breeds that are exploited to make decisions about farming systems and management strategies to maximize productivity.

Nesta revisão, nós compilamos informações sobre as respostas fisiológicas de caprinos para o ambiente semiárido do nordeste do Brasil e sugerir algumas estratégias para evitar o desconforto térmico destes pequenos ruminantes. Devido a mudanças climáticas recentes, o número de estudos que procuram melhorar bem-estar animal tem intensificado para minimizar as perdas econômicas na produção animal nos trópicos. Entre as variáveis climáticas, a alta temperatura ambiente, umidade do ar e radiação solar direta são as principais causas de desconforto fisiológico em animais que diminuem sua produtividade. Assim, é muito importante estudar os componentes que interagem no processo de termorregulação, as consequências do desequilíbrio neste processo, e maneiras de aliviar estes efeitos, com o objetivo de proporcionar conforto térmico para buscar o bem-estar animal dos animais. Portanto, é essencial conhecer a interação entre os animais e o ambiente e da capacidade de adaptação das espécies e raças que são exploradas para tomar decisões sobre os sistemas e estratégias de gestão agrícola para maximizar a produtividade.

The Brazilian semi-arid environment influences the physiological responses of goats / O ambiente semiárido brasileiro influencia as respostas fisiológicas de caprinos

In this review, we compile information about the physiologic responses of goats to north-eastern Brazils semiarid environment and suggest some strategies to avoid the thermal discomfort of these small ruminants. Due to recent weather changes, the number of studies seeking to improve animal welfare has intensified to minimize the economic losses on animal production in the tropics. Among the climatic variables, the high room temperature, air humidity, and direct solar radiation are the main causes of physiological discomfort in animals that decrease their productivity. Therefore, it is very important to study the components that interact in the thermoregulation process, the consequences of disequilibrium in this process, and ways to ease these effects, aiming to provide thermal comfort to and seek the animal welfare of the animals. Therefore, it is essential to know the interaction between animals and the environment and the adaptability of the species and breeds that are exploited to make decisions about farming systems and management strategies to maximize productivity.(AU)

Nesta revisão, nós compilamos informações sobre as respostas fisiológicas de caprinos para o ambiente semiárido do nordeste do Brasil e sugerir algumas estratégias para evitar o desconforto térmico destes pequenos ruminantes. Devido a mudanças climáticas recentes, o número de estudos que procuram melhorar bem-estar animal tem intensificado para minimizar as perdas econômicas na produção animal nos trópicos. Entre as variáveis climáticas, a alta temperatura ambiente, umidade do ar e radiação solar direta são as principais causas de desconforto fisiológico em animais que diminuem sua produtividade. Assim, é muito importante estudar os componentes que interagem no processo de termorregulação, as consequências do desequilíbrio neste processo, e maneiras de aliviar estes efeitos, com o objetivo de proporcionar conforto térmico para buscar o bem-estar animal dos animais. Portanto, é essencial conhecer a interação entre os animais e o ambiente e da capacidade de adaptação das espécies e raças que são exploradas para tomar decisões sobre os sistemas e estratégias de gestão agrícola para maximizar a produtividade.(AU)

Response of Rhodococcus erythropolis strain IBBPo1 to toxic organic solvents

Abstract Recently, there has been a lot of interest in the utilization of rhodococci in the bioremediation of petroleum contaminated environments. This study investigates the response of Rhodococcus erythropolis IBBPo1 cells to 1% organic solvents (alkanes, aromatics). A combination of microbiology, biochemical, and molecular approaches were used to examine cell adaptation mechanisms likely to be pursued by this strain after 1% organic solvent exposure. R. erythropolis IBBPo1 was found to utilize 1% alkanes (cyclohexane, n-hexane, n-decane) and aromatics (toluene, styrene, ethylbenzene) as the sole carbon source. Modifications in cell viability, cell morphology, membrane permeability, lipid profile, carotenoid pigments profile and 16S rRNA gene were revealed in R. erythropolis IBBPo1 cells grown 1 and 24 h on minimal medium in the presence of 1% alkanes (cyclohexane, n-hexane, n-decane) and aromatics (toluene, styrene, ethylbenzene). Due to its environmental origin and its metabolic potential, R. erythropolis IBBPo1 is an excellent candidate for the bioremediation of soils contaminated with crude oils and other toxic compounds. Moreover, the carotenoid pigments produced by this nonpathogenic Gram-positive bacterium have a variety of other potential applications.

Contribution of a mutational hot spot to hemoglobin adaptation in high-altitude Andean house wrens.

A key question in evolutionary genetics is why certain mutations or certain types of mutation make disproportionate contributions to adaptive phenotypic evolution. In principle, the preferential fixation of particular mutations could stem directly from variation in the underlying rate of mutation to function-altering alleles. However, the influence of mutation bias on the genetic architecture of phenotypic evolution is difficult to evaluate because data on rates of mutation to function-altering alleles are seldom available. Here, we report the discovery that a single point mutation at a highly mutable site in the ß(A)-globin gene has contributed to an evolutionary change in hemoglobin (Hb) function in high-altitude Andean house wrens (Troglodytes aedon). Results of experiments on native Hb variants and engineered, recombinant Hb mutants demonstrate that a nonsynonymous mutation at a CpG dinucleotide in the ß(A)-globin gene is responsible for an evolved difference in Hb-O2 affinity between high- and low-altitude house wren populations. Moreover, patterns of genomic differentiation between high- and low-altitude populations suggest that altitudinal differentiation in allele frequencies at the causal amino acid polymorphism reflects a history of spatially varying selection. The experimental results highlight the influence of mutation rate on the genetic basis of phenotypic evolution by demonstrating that a large-effect allele at a highly mutable CpG site has promoted physiological differentiation in blood O2 transport capacity between house wren populations that are native to different elevations.

Craniofacial plasticity in ancient Peru.

Numerous studies have utilized craniometric data to explore the roles of genetic diversity and environment in human cranial shape variation. Peru is a particularly interesting region to examine cranial variation due to the wide variety of high and low altitude ecological zones, which in combination with rugged terrain have created isolated populations with vastly different physiological adaptations. This study examines seven samples from throughout Peru in an effort to understand the contributions of environmental adaptation and genetic relatedness to craniofacial variation at a regional scale. Morphological variation was investigated using a canonical discriminant analysis and Mahalanobis D(2) analysis. Results indicate that all groups are significantly different from one another with the closest relationship between Yauyos and Jahuay, two sites that are located geographically close in central Peru but in very different ecozones. The relationship between latitude/longitude and face shape was also examined with a spatial autocorrelation analysis (Moran's I) using ArcMap and show that there is significant spatial patterning for facial measures and geographic location suggesting that there is an association between biological variation and geographic location.

Maturity-related changes in venom toxicity of the freshwater stingray Potamotrygon leopoldi.

Aquatic venomous animals such as stingrays represent a largely untapped source for venom-based drug development. However, the major challenge for a potential drug development pipeline is the high inter- and intraspecific variability in toxicity and venom composition. As of today, little is known about maturity-driven changes in these traits in stingrays. The present study investigates the differences in toxicity and venom composition in different maturity stages of the freshwater stingray Potamotrygon leopoldi. This species can be found in the Xingú River basin (Brazil), where it mainly feeds on invertebrates, while being predated by other stingrays or large catfishes. P. leopoldi, as commonly known for stingrays, can cause severe injuries with the venomous dentine spine located at its tails. The toxicity of tissue extracts of juvenile and mature specimens was recorded on a myoblast cell culture bioassay. Venom composition and bioactivity of compounds were analyzed with planar chromatography linked to an Aliivibrio fischeri bioassay. Results revealed a decrease in venom toxicity during maturation, but no changes in venom composition. These findings may indicate that toxicity in mature specimens becomes evolutionary less important, probably due to a decrease in predation pressure.

The genomics of an adaptive radiation: insights across the Heliconius speciation continuum.

Fueled by new technologies that allow rapid and inexpensive assessment of fine scale individual genomic variation, researchers are making transformational discoveries at the interface between genomes and biological complexity. Here we review genomic research in Heliconius butterflies - a radiation characterized by extraordinary phenotypic diversity in warningly colored wing patterns and composed of a continuum of taxa across the stages of speciation. These characteristics, coupled with a 50-year legacy of ecological and behavioral research, offer exceptional prospects for genomic studies into the nature of adaptive differences and the formation of new species. Research in Heliconius provides clear connections between genotype, phenotype, and fitness of wing color patterns shown to underlie adaptation and speciation. This research is challenging our perceptions about how speciation occurs in the presence of gene flow and the role of hybridization in generating adaptive novelty. With the release of the first Heliconius genome assembly, emerging genomic studies are painting a dynamic picture of the evolving species boundary. As the field of speciation genomics moves beyond describing patterns, towards a more integrated understanding of the process of speciation, groups such as Heliconius, where there is a clear speciation continuum and the traits underlying adaptation and speciation are known, will provide a roadmap for identifying variation crucial in the origins of biodiversity.

Unrecognized coral species diversity masks differences in functional ecology.

Porites corals are foundation species on Pacific reefs but a confused taxonomy hinders understanding of their ecosystem function and responses to climate change. Here, we show that what has been considered a single species in the eastern tropical Pacific, Porites lobata, includes a morphologically similar yet ecologically distinct species, Porites evermanni. While P. lobata reproduces mainly sexually, P. evermanni dominates in areas where triggerfish prey on bioeroding mussels living within the coral skeleton, thereby generating asexual coral fragments. These fragments proliferate in marginal habitat not colonized by P. lobata. The two Porites species also show a differential bleaching response despite hosting the same dominant symbiont subclade. Thus, hidden diversity within these reef-builders has until now obscured differences in trophic interactions, reproductive dynamics and bleaching susceptibility, indicative of differential responses when confronted with future climate change.