Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 88
Filter
Add more filters










Publication year range
1.
Science ; 382(6671): 725-731, 2023 11 10.
Article in English | MEDLINE | ID: mdl-37943933

ABSTRACT

The global replacement of histones with protamines in sperm chromatin is widespread in animals, including insects, but its actual function remains enigmatic. We show that in the Drosophila paternal effect mutant paternal loss (pal), sperm chromatin retains germline histones H3 and H4 genome wide without impairing sperm viability. However, after fertilization, pal sperm chromosomes are targeted by the egg chromosomal passenger complex and engage into a catastrophic premature division in synchrony with female meiosis II. We show that pal encodes a rapidly evolving transition protein specifically required for the eviction of (H3-H4)2 tetramers from spermatid DNA after the removal of H2A-H2B dimers. Our study thus reveals an unsuspected role of histone eviction from insect sperm chromatin: safeguarding the integrity of the male pronucleus during female meiosis.


Subject(s)
Amidine-Lyases , Chromatin , Drosophila Proteins , Drosophila melanogaster , Fertilization , Histones , Paternal Inheritance , Spermatozoa , Animals , Female , Male , Chromatin/metabolism , Drosophila Proteins/genetics , Drosophila Proteins/metabolism , Histones/metabolism , Spermatozoa/metabolism , Amidine-Lyases/genetics , Amidine-Lyases/metabolism , DNA Packaging
2.
Funct Integr Genomics ; 22(4): 525-535, 2022 Aug.
Article in English | MEDLINE | ID: mdl-35394266

ABSTRACT

This study aimed to assess the association between PAM single-nucleotide polymorphisms (SNPs) and T2DM risk in the Chinese population. We performed the genotype of PAM SNPs using Agena MassARRAY in 1002 subjects. The effect of PAM polymorphisms on T2DM occurrence was evaluated by logistic regression analysis. False-positive report probability (FPRP) was utilized to assess the noteworthiness of the significant results. This study showed that PAM rs406761, rs17154889, and rs6889592 were related to an increased risk of T2DM. The similar results were also in subjects with ≤ 60 years. Rs2431320 and rs406761 were related to an increased risk of T2DM in males, and rs6889592 was only found to be associated with T2DM risk in females. Rs2431320 and rs406761 increased T2DM risk in people with BMI > 24, and rs6889592 and rs26431 significantly correlated with T2DM risk in people with BMI ≤ 24. By comparing patients with no retinopathy with controls, the correlation between PAM rs406761 and rs17154889 and T2DM risk was observed. The significant association between T2DM risk and PAM SNPs was remarkable by FPRP values. PAM SNPs were correlated with T2DM risk in the Chinese population, illustrating the importance of PAM SNPs in the pathogenesis of T2DM.


Subject(s)
Amidine-Lyases , Diabetes Mellitus, Type 2 , Genetic Predisposition to Disease , Mixed Function Oxygenases , Amidine-Lyases/genetics , Asian People/genetics , Case-Control Studies , China/epidemiology , Diabetes Mellitus, Type 2/genetics , Diabetes Mellitus, Type 2/pathology , Female , Genotype , Humans , Male , Mixed Function Oxygenases/genetics , Polymorphism, Single Nucleotide
3.
J Cell Physiol ; 236(11): 7745-7758, 2021 11.
Article in English | MEDLINE | ID: mdl-34061983

ABSTRACT

The biosynthesis of many of the peptides involved in homeostatic control requires peptidylglycine α-amidating monooxygenase (PAM), an ancient, highly conserved copper- and ascorbate-dependent enzyme. Using the production of amidated chromogranin A to monitor PAM function in tumor cells, physiologically relevant levels of hypoxia were shown to inhibit this monooxygenase. The ability of primary pituitary cells exposed to hypoxic conditions for 4 h to produce amidated chromogranin A was similarly inhibited. The affinity of the purified monooxygenase for oxygen (Km = 99 ± 19 µM) was consistent with this result. The ability of PAM to alter secretory pathway behavior under normoxic conditions required its monooxygenase activity. Under normoxic conditions, hypoxia-inducible factor 1a levels in dense cultures of corticotrope tumor cells expressing high levels of PAM exceeded those in control cells; expression of inactive monooxygenase did not have this effect. The effects of hypoxia on levels of two PAM-regulated genes (activating transcription factor 3 [Atf3] and FK506 binding protein 2 [Fkbp2]) differed in cells expressing high versus low levels of PAM. Putative hypoxia response elements occur in both human and mouse PAM, and hPAM has consistently been identified as one of the genes upregulated in response to hypoxia. Expression of PAM is also known to alter gene expression. A quarter of the genes consistently upregulated in response to hypoxia were downregulated following increased expression of PAM. Taken together, our data suggest roles for PAM and amidated peptide secretion in the coordination of tissue-specific responses to hypoxia.


Subject(s)
Chromogranin A/metabolism , Mixed Function Oxygenases/metabolism , Multienzyme Complexes/metabolism , Pituitary Gland, Anterior/enzymology , Pituitary Neoplasms/enzymology , Tumor Hypoxia , Activating Transcription Factor 3/genetics , Activating Transcription Factor 3/metabolism , Amidine-Lyases/genetics , Amidine-Lyases/metabolism , Animals , Cell Line, Tumor , Databases, Genetic , Female , Gene Expression Regulation, Neoplastic , Hypoxia-Inducible Factor 1, alpha Subunit/genetics , Hypoxia-Inducible Factor 1, alpha Subunit/metabolism , Male , Mice , Mixed Function Oxygenases/genetics , Multienzyme Complexes/genetics , Pituitary Gland, Anterior/pathology , Pituitary Neoplasms/genetics , Pituitary Neoplasms/pathology , Rats , Tacrolimus Binding Proteins/genetics , Tacrolimus Binding Proteins/metabolism
4.
Toxicon ; 189: 91-104, 2021 Jan 15.
Article in English | MEDLINE | ID: mdl-33181162

ABSTRACT

Several research groups have studied the components produced by the venom gland of the scorpion Tityus serrulatus, which has one of the most lethal venoms in the world. Various methodologies have been employed to clarify the complex mechanisms of action of these components, especially neurotoxins and enzymes. Transcriptomes and proteomes have provided important information for pharmacological, biochemical, and immunological research. Next-generation sequencing (NGS) has allowed the description of new transcripts and completion of partial sequence descriptions for peptides, especially those with low expression levels. In the present work, after NGS sequencing, we searched for new putative venom components. We present a total of nine new transcripts with neurotoxic potential (Ts33-41) and describe the sequences of one hyaluronidase (TsHyal_4); three enzymes involved in amidation (peptidyl-glycine alpha-amidating monooxygenase A, peptidyl-alpha-hydroxyglycine alpha-amidating lyase, and peptidylglycine alpha-hydroxylating monooxygenase), which increases the lethal potential of neurotoxins; and also the enzyme Ts_Chitinase1, which may be involved in the venom's digestive action. In addition, we determined the level of transcription of five groups: toxins, metalloproteases, hyaluronidases, chitinases and amidation enzymes, including new components found in this study. Toxins are the predominant group with an expression level of 91.945%, followed by metalloproteases with only 7.790% and other groups representing 0.265%.


Subject(s)
Proteome/chemistry , Scorpion Venoms/chemistry , Scorpions , Amidine-Lyases , Amino Acid Sequence , Animals , Computational Biology , Metalloproteases , Mixed Function Oxygenases , Multienzyme Complexes , Transcriptome
5.
J Mol Biol ; 432(24): 166713, 2020 12 04.
Article in English | MEDLINE | ID: mdl-33197464

ABSTRACT

Mitochondria are essential cellular organelles that import the majority of proteins to sustain their function in cellular metabolism and homeostasis. Due to their role in oxidative phosphorylation, mitochondria are constantly affected by oxidative stress. Stability of mitochondrial DNA (mtDNA) is essential for mitochondrial physiology and cellular well-being and for this reason mtDNA lesions have to be rapidly recognized and repaired. Base excision repair (BER) is the main pathway responsible for repairing non-helix distorting base lesions both into the nucleus and in mitochondria. Apurinic/Apyrimidinic Endonuclease 1 (APE1) is a key component of BER pathway and the only protein that can recognize and process an abasic (AP) site. Comprehensions of the mechanisms regulating APE1 intracellular trafficking are still fragmentary. In this study we focused our attention on the mitochondrial form of APE1 protein and how oxidative stress induces its translocation to maintain mtDNA integrity. Our data proved that: (i) the rise of mitochondrial ROS determines a very rapid translocation of APE1 from the intermembrane space (IMS) into the matrix; and (ii) TIM23/PAM machinery complex is responsible for the matrix translocation of APE1. Moreover, our data support the hypothesis that the IMS, where the majority of APE1 resides, could represent a sort of storage site for the protein.


Subject(s)
Amidine-Lyases/genetics , DNA-(Apurinic or Apyrimidinic Site) Lyase/genetics , Mitochondria/genetics , Mitochondrial Membrane Transport Proteins/genetics , Mixed Function Oxygenases/genetics , DNA Damage/genetics , DNA Repair/genetics , DNA, Mitochondrial/genetics , Humans , Mitochondrial Precursor Protein Import Complex Proteins , Multiprotein Complexes/genetics , Oxidative Phosphorylation , Oxidative Stress/genetics , Protein Transport/genetics
6.
Proc Natl Acad Sci U S A ; 117(30): 17820-17831, 2020 07 28.
Article in English | MEDLINE | ID: mdl-32661174

ABSTRACT

The discovery of atrial secretory granules and the natriuretic peptides stored in them identified the atrium as an endocrine organ. Although neither atrial nor brain natriuretic peptide (ANP, BNP) is amidated, the major membrane protein in atrial granules is peptidylglycine α-amidating monooxygenase (PAM), an enzyme essential for amidated peptide biosynthesis. Mice lacking cardiomyocyte PAM (PamMyh6-cKO/cKO) are viable, but a gene dosage-dependent drop in atrial ANP and BNP content occurred. Ultrastructural analysis of adult PamMyh6-cKO/cKO atria revealed a 13-fold drop in the number of secretory granules. When primary cultures of Pam0-Cre-cKO/cKO atrial myocytes (no Cre recombinase, PAM floxed) were transduced with Cre-GFP lentivirus, PAM protein levels dropped, followed by a decline in ANP precursor (proANP) levels. Expression of exogenous PAM in PamMyh6-cKO/cKO atrial myocytes produced a dose-dependent rescue of proANP content; strikingly, this response did not require the monooxygenase activity of PAM. Unlike many prohormones, atrial proANP is stored intact. A threefold increase in the basal rate of proANP secretion by PamMyh6-cKO/cKO myocytes was a major contributor to its reduced levels. While proANP secretion was increased following treatment of control cultures with drugs that block the activation of Golgi-localized Arf proteins and COPI vesicle formation, proANP secretion by PamMyh6-cKO/cKO myocytes was unaffected. In cells lacking secretory granules, expression of exogenous PAM led to the accumulation of fluorescently tagged proANP in the cis-Golgi region. Our data indicate that COPI vesicle-mediated recycling of PAM from the cis-Golgi to the endoplasmic reticulum plays an essential role in the biogenesis of proANP containing atrial granules.


Subject(s)
Amidine-Lyases/metabolism , Cytoplasmic Granules/metabolism , Heart Atria/metabolism , Mixed Function Oxygenases/metabolism , Secretory Vesicles/metabolism , Amidine-Lyases/genetics , Animals , Atrial Natriuretic Factor/metabolism , Cytoplasmic Granules/ultrastructure , Gene Expression , Golgi Apparatus/metabolism , Golgi Apparatus/ultrastructure , Lysosomes/metabolism , Lysosomes/ultrastructure , Mice , Mice, Knockout , Mixed Function Oxygenases/genetics , Monocytes/metabolism , Muscle Cells/metabolism , Secretory Vesicles/ultrastructure
7.
Sci Rep ; 10(1): 10943, 2020 07 02.
Article in English | MEDLINE | ID: mdl-32616904

ABSTRACT

Neuroendocrine neoplasms (NENs) are rare epithelial tumors with heterogeneous and frequently unpredictable clinical behavior. Available biomarkers are insufficient to guide individual patient prognosis or therapy selection. Peptidylglycine α-amidating monooxygenase (PAM) is an enzyme expressed by neuroendocrine cells that participates in hormone maturation. The objective of this study was to assess the distribution, clinical associations and survival implications of PAM immunoreactivity in primary NENs. Of 109 primary NENs, 7% were PAM-negative, 25% were PAM-low and 68% were PAM-high. Staining intensity was high in small bowel (p = 0.04) and low in stomach (p = 0.004) NENs. PAM staining was lower in higher grade tumors (p < 0.001) and patients who died (p < 0.001) but did not vary by tumor size or stage at surgery. In patients who died, time to death was shorter in patients with reduced PAM immunoreactivity: median times to death were 11.3 (PAM-negative), 29.4 (PAM-low) and 61.7 (PAM-high) months. Lower PAM staining was associated with increased risk of death after adjusting for disease stage [PAM negative, HR = 13.8 (CI: 4.2-45.5)]. PAM immunoreactivity in primary NENs is readily assessable and a potentially useful stage-independent predictor of survival.


Subject(s)
Amidine-Lyases/metabolism , Biomarkers, Tumor/metabolism , Immunohistochemistry/methods , Mixed Function Oxygenases/metabolism , Neuroendocrine Tumors/pathology , Aged , Aged, 80 and over , Female , Follow-Up Studies , Humans , Male , Middle Aged , Neuroendocrine Tumors/metabolism , Neuroendocrine Tumors/surgery , Prognosis , Survival Rate
8.
Diabetologia ; 63(3): 561-576, 2020 03.
Article in English | MEDLINE | ID: mdl-31984442

ABSTRACT

AIMS/HYPOTHESIS: Peptide hormones are first synthesised as larger, inactive precursors that are converted to their active forms by endopeptidase cleavage and post-translational modifications, such as amidation. Recent, large-scale genome-wide studies have suggested that two coding variants of the amidating enzyme, peptidylglycine α-amidating monooxygenase (PAM), are associated with impaired insulin secretion and increased type 2 diabetes risk. We aimed to elucidate the role of PAM in modulating beta cell peptide amidation, beta cell function and the development of diabetes. METHODS: PAM transcript and protein levels were analysed in mouse islets following induction of endoplasmic reticulum (ER) or cytokine stress, and PAM expression patterns were examined in human islets. To study whether haploinsufficiency of PAM accelerates the development of diabetes, Pam+/- and Pam+/+ mice were fed a low-fat diet (LFD) or high-fat diet (HFD) and glucose homeostasis was assessed. Since aggregates of the PAM substrate human islet amyloid polypeptide (hIAPP) lead to islet inflammation and beta cell failure, we also investigated whether PAM haploinsufficiency accelerated hIAPP-induced diabetes and islet amyloid formation in Pam+/- and Pam+/+ mice with beta cell expression of hIAPP. RESULTS: Immunostaining revealed high expression of PAM in alpha, beta and delta cells in human pancreatic islets. Pam mRNA and PAM protein expression were reduced in mouse islets following administration of an HFD, and in isolated islets following induction of ER stress with thapsigargin, or cytokine stress with IL-1ß, IFN-γ and TFN-α. Despite Pam+/- only having 50% PAM expression and enzyme activity as compared with Pam+/+ mice, glucose tolerance and body mass composition were comparable in the two models. After 24 weeks of HFD, both Pam+/- and Pam+/+ mice had insulin resistance and impaired glucose tolerance, but no differences in glucose tolerance, insulin sensitivity or plasma insulin levels were observed in PAM haploinsufficient mice. Islet amyloid formation and beta cell function were also similar in Pam+/- and Pam+/+ mice with beta cell expression of hIAPP. CONCLUSIONS/INTERPRETATION: Haploinsufficiency of PAM in mice does not accelerate the development of diet-induced obesity or hIAPP transgene-induced diabetes.


Subject(s)
Amidine-Lyases/genetics , Diabetes Mellitus, Experimental/genetics , Diabetes Mellitus, Experimental/pathology , Islet Amyloid Polypeptide/genetics , Mixed Function Oxygenases/genetics , Amidine-Lyases/physiology , Animals , Cells, Cultured , Diabetes Mellitus, Type 2/genetics , Diabetes Mellitus, Type 2/metabolism , Diabetes Mellitus, Type 2/pathology , Disease Progression , Epistasis, Genetic/physiology , Female , Genetic Predisposition to Disease , Haploinsufficiency , Humans , Insulin-Secreting Cells/metabolism , Insulin-Secreting Cells/pathology , Islet Amyloid Polypeptide/physiology , Islets of Langerhans/metabolism , Islets of Langerhans/pathology , Male , Mice , Mice, Inbred C57BL , Mice, Transgenic , Mixed Function Oxygenases/physiology , Rats , Rats, Inbred Lew , Risk Factors
9.
Toxins (Basel) ; 11(7)2019 07 20.
Article in English | MEDLINE | ID: mdl-31330798

ABSTRACT

Many peptides in scorpion venoms are amidated at their C-termini. This post-translational modification is paramount for the correct biological function of ion channel toxins and antimicrobial peptides, among others. The discovery of canonical amidation sequences in transcriptome-derived scorpion proproteins suggests that a conserved enzymatic α-amidation system must be responsible for this modification of scorpion peptides. A transcriptomic approach was employed to identify sequences putatively encoding enzymes of the α-amidation pathway. A dual enzymatic α-amidation system was found, consisting of the membrane-anchored, bifunctional, peptidylglycine α-amidating monooxygenase (PAM) and its paralogs, soluble monofunctional peptidylglycine α-hydroxylating monooxygenase (PHMm) and peptidyl-α-hydroxyglycine α-amidating lyase (PALm). Independent genes encode these three enzymes. Amino acid residues responsible for ion coordination and enzymatic activity are conserved in these sequences, suggesting that the enzymes are functional. Potential endoproteolytic recognition sites for proprotein convertases in the PAM sequence indicate that PAM-derived soluble isoforms may also be expressed. Sequences potentially encoding proprotein convertases (PC1 and PC2), carboxypeptidase E (CPE), and other enzymes of the α-amidation pathway, were also found, confirming the presence of this pathway in scorpions.


Subject(s)
Exocrine Glands/metabolism , Scorpion Venoms/chemistry , Scorpions/enzymology , Amidine-Lyases/genetics , Animals , Carboxypeptidase H/genetics , Mixed Function Oxygenases/genetics , Multienzyme Complexes/genetics , Proprotein Convertases/genetics , Protein Processing, Post-Translational , Scorpions/genetics
10.
Breast Cancer Res Treat ; 173(3): 533-543, 2019 Feb.
Article in English | MEDLINE | ID: mdl-30361874

ABSTRACT

PURPOSE: There is an urgent need for the development of a predictor of response to chemotherapy for ER-positive breast cancer which is less chemosensitive than for ER-negative breast cancer in order to avoid unnecessary chemotherapy. In the present study, intrinsic subtyping by PAM50 was evaluated for its ability to predict a response to chemotherapy. PATIENTS AND METHODS: For this study, 124 patients with ER-positive breast cancer treated with neoadjuvant sequential paclitaxel and FEC (NAC) were evaluated. Tumor biopsy specimens obtained before NAC were subjected to intrinsic subtyping (IS) by gene expression (GE) using PAM50 (PAM50-IS) or immunohistochemistry (IHC-IS). RESULTS: Of the PAM50-ISs (Luminal A, Luminal B, HER2-enriched, and Basal-like), GE-Luminal A showed the lowest pCR rate (1.9%), and multivariate analysis revealed that GE-Luminal A was a significant (P = 0.031) predictor of non-pCR independently of other clinicopathological parameters, including Ki67, and tumor-infiltrating lymphocytes. Of the IHC-ISs, on the other hand, IHC-Luminal A was not significantly associated with pCR. We also found that breast tumors with low ER levels (1-9%), like ER-negative tumors, were mostly GE-HER2-enriched and GE-Basal-like, and more sensitive to NAC than those with high ER levels (≥ 10%). CONCLUSIONS: GE-Luminal A intrinsically subtyped by PAM50 was the least sensitive to NAC and very unlikely to attain pCR. IHC-Luminal A identified by IHC, on the other hand, was not significantly predictive of pCR. In addition, PAM50 revealed that tumors with low ER (1-9%) were more like ER-negative tumors than ER-positive tumors, and most such cases should therefore would better be treated with chemotherapy.


Subject(s)
Amidine-Lyases/genetics , Antineoplastic Combined Chemotherapy Protocols/therapeutic use , Biomarkers, Tumor , Breast Neoplasms/drug therapy , Breast Neoplasms/genetics , Mixed Function Oxygenases/genetics , Receptors, Estrogen/genetics , Adult , Aged , Amidine-Lyases/metabolism , Antineoplastic Combined Chemotherapy Protocols/adverse effects , Breast Neoplasms/diagnosis , Breast Neoplasms/mortality , Female , Gene Expression , Humans , Immunohistochemistry , Middle Aged , Mixed Function Oxygenases/metabolism , Neoadjuvant Therapy , Neoplasm Grading , Neoplasm Staging , Prognosis , Receptors, Estrogen/metabolism , Risk Factors , Survival Analysis , Treatment Outcome
11.
Diabetes Obes Metab ; 20 Suppl 2: 64-76, 2018 09.
Article in English | MEDLINE | ID: mdl-30230179

ABSTRACT

Biosynthesis of peptide hormones by pancreatic islet endocrine cells is a tightly orchestrated process that is critical for metabolic homeostasis. Like neuroendocrine peptides, insulin and other islet hormones are first synthesized as larger precursor molecules that are processed to their mature secreted products through a series of proteolytic cleavages, mediated by the prohormone convertases Pc1/3 and Pc2, and carboxypeptidase E. Additional posttranslational modifications including C-terminal amidation of the ß-cell peptide islet amyloid polypeptide (IAPP) by peptidyl-glycine α-amidating monooxygenase (Pam) may also occur. Genome-wide association studies (GWAS) have showed genetic linkage of these processing enzymes to obesity, ß-cell dysfunction, and type 2 diabetes (T2D), pointing to their important roles in metabolism and blood glucose regulation. In both type 1 diabetes (T1D) and T2D, and in the face of metabolic or inflammatory stresses, islet prohormone processing may become impaired; indeed elevated proinsulin:insulin (PI:I) ratios are a hallmark of the ß-cell dysfunction in T2D. Recent studies suggest that genetic or acquired defects in proIAPP processing may lead to the production and secretion of incompletely processed forms of proIAPP that could contribute to T2D pathogenesis, and additionally that impaired processing of both PI and proIAPP may be characteristic of ß-cell dysfunction in T1D. In islet α-cells, the prohormone proglucagon is normally processed to bioactive glucagon by Pc2 but may express Pc1/3 under certain conditions leading to production of GLP-1(7-36NH2 ). A better understanding of how ß-cell processing of PI and proIAPP, as well as α-cell processing of proglucagon, are impacted by genetic susceptibility and in the face of diabetogenic stresses, may lead to new therapeutic approaches for improving islet function in diabetes.


Subject(s)
Carboxypeptidase H/physiology , Islets of Langerhans/metabolism , Proprotein Convertase 1/physiology , Proprotein Convertase 2/physiology , Amidine-Lyases/metabolism , Glucagon-Secreting Cells/metabolism , Humans , Insulin/biosynthesis , Insulin-Secreting Cells/metabolism , Mixed Function Oxygenases/metabolism , Proinsulin/metabolism
12.
J Biol Chem ; 293(36): 13897-13909, 2018 09 07.
Article in English | MEDLINE | ID: mdl-29997255

ABSTRACT

PHR (PAM/Highwire/RPM-1) proteins are conserved RING E3 ubiquitin ligases that function in developmental processes, such as axon termination and synapse formation, as well as axon degeneration. At present, our understanding of how PHR proteins form ubiquitin ligase complexes remains incomplete. Although genetic studies indicate NMNAT2 is an important mediator of PHR protein function in axon degeneration, it remains unknown how PHR proteins inhibit NMNAT2. Here, we decipher the biochemical basis for how the human PHR protein PAM, also called MYCBP2, forms a noncanonical Skp/Cullin/F-box (SCF) complex that contains the F-box protein FBXO45 and SKP1 but lacks CUL1. We show FBXO45 does not simply function in substrate recognition but is important for assembly of the PAM/FBXO45/SKP1 complex. Interestingly, we demonstrate a novel role for SKP1 as an auxiliary component of the target recognition module that enhances binding of FBXO45 to NMNAT2. Finally, we provide biochemical evidence that PAM polyubiquitinates NMNAT2 and regulates NMNAT2 protein stability and degradation by the proteasome.


Subject(s)
Amidine-Lyases/chemistry , Mixed Function Oxygenases/chemistry , Nicotinamide-Nucleotide Adenylyltransferase/chemistry , SKP Cullin F-Box Protein Ligases/chemistry , Ubiquitination , Adaptor Proteins, Signal Transducing , Animals , Caenorhabditis elegans , F-Box Proteins/metabolism , Humans , Multiprotein Complexes/chemistry , Multiprotein Complexes/physiology , Nicotinamide-Nucleotide Adenylyltransferase/metabolism , Protein Binding , S-Phase Kinase-Associated Proteins , SKP Cullin F-Box Protein Ligases/physiology , Ubiquitin-Protein Ligases
13.
Nat Genet ; 50(8): 1122-1131, 2018 08.
Article in English | MEDLINE | ID: mdl-30054598

ABSTRACT

The molecular mechanisms underpinning susceptibility loci for type 2 diabetes (T2D) remain poorly understood. Coding variants in peptidylglycine α-amidating monooxygenase (PAM) are associated with both T2D risk and insulinogenic index. Here, we demonstrate that the T2D risk alleles impact negatively on overall PAM activity via defects in expression and catalytic function. PAM deficiency results in reduced insulin content and altered dynamics of insulin secretion in a human ß-cell model and primary islets from cadaveric donors. Thus, our results demonstrate a role for PAM in ß-cell function, and establish molecular mechanisms for T2D risk alleles at this locus.


Subject(s)
Amidine-Lyases/genetics , Diabetes Mellitus, Type 2/genetics , Insulin Secretion/genetics , Insulin-Secreting Cells/pathology , Mixed Function Oxygenases/genetics , Alleles , Animals , Cell Line , Genetic Predisposition to Disease , HEK293 Cells , Humans , Insulin/genetics , Mice , Polymorphism, Single Nucleotide
14.
Cardiovasc Pathol ; 34: 50-57, 2018.
Article in English | MEDLINE | ID: mdl-29677652

ABSTRACT

Skeletal myocytes have well-established fast and slow twitch fibers with unique gene and protein specific expression patterns. By immunohistochemical staining, these show a mosaic pattern across myocytes. We hypothesized cardiac myocytes may behave similarly where some proteins are differentially expressed between mature cardiomyocytes. We utilized the tool HPASubC on over 52,000 cardiac images of the Human Protein Atlas to identify differential protein expression patterns by immunohistochemistry across the cardiomyocytes. We matched identified proteins to open chromatin and gene expression data. We identified 143 putative proteins with mosaic patterns of expression across the cardiomyocytes. We validated four of these proteins (MYL3, MYL4, PAM, and MYOM1) and demonstrated unique atrial or ventricular patterns of expression for each. Acetylation of histone H3K27 at the promoters of these four genes were consistent with the atrial/ventricular expression patterns. Despite the generally accepted homogeneity of cardiomyocytes, a small subset of proteins varies between cardiomyocytes in a mosaic pattern. This fundamental process has been previously uncharacterized. These changes may inform on different functional and disease-related activities of proteins in individual cardiomyocytes.


Subject(s)
Muscle Proteins/analysis , Myocytes, Cardiac/chemistry , Acetylation , Amidine-Lyases/analysis , Connectin/analysis , Gene Expression Regulation , Histones/chemistry , Humans , Image Processing, Computer-Assisted , Immunohistochemistry , Mixed Function Oxygenases/analysis , Mosaicism , Muscle Proteins/genetics , Myosin Light Chains/analysis , Pattern Recognition, Automated , Phenotype , Promoter Regions, Genetic , Protein Interaction Maps , Proteomics/methods
15.
J Biol Chem ; 293(16): 6052-6063, 2018 04 20.
Article in English | MEDLINE | ID: mdl-29487130

ABSTRACT

Neuropeptides constitute a vast and functionally diverse family of neurochemical signaling molecules and are widely involved in the regulation of various physiological processes. The nematode Caenorhabditis elegans is well-suited for the study of neuropeptide biochemistry and function, as neuropeptide biosynthesis enzymes are not essential for C. elegans viability. This permits the study of neuropeptide biosynthesis in mutants lacking certain neuropeptide-processing enzymes. Mass spectrometry has been used to study the effects of proprotein convertase and carboxypeptidase mutations on proteolytic processing of neuropeptide precursors and on the peptidome in C. elegans However, the enzymes required for the last step in the production of many bioactive peptides, the carboxyl-terminal amidation reaction, have not been characterized in this manner. Here, we describe three genes that encode homologs of neuropeptide amidation enzymes in C. elegans and used tandem LC-MS to compare neuropeptides in WT animals with those in newly generated mutants for these putative amidation enzymes. We report that mutants lacking both a functional peptidylglycine α-hydroxylating monooxygenase and a peptidylglycine α-amidating monooxygenase had a severely altered neuropeptide profile and also a decreased number of offspring. Interestingly, single mutants of the amidation enzymes still expressed some fully processed amidated neuropeptides, indicating the existence of a redundant amidation mechanism in C. elegans All MS data are available via ProteomeXchange with the identifier PXD008942. In summary, the key steps in neuropeptide processing in C. elegans seem to be executed by redundant enzymes, and loss of these enzymes severely affects brood size, supporting the need of amidated peptides for C. elegans reproduction.


Subject(s)
Amidine-Lyases/metabolism , Caenorhabditis elegans Proteins/metabolism , Caenorhabditis elegans/metabolism , Mixed Function Oxygenases/metabolism , Multienzyme Complexes/metabolism , Neuropeptides/metabolism , Amidine-Lyases/chemistry , Amidine-Lyases/genetics , Amino Acid Sequence , Animals , Biosynthetic Pathways , Caenorhabditis elegans/chemistry , Caenorhabditis elegans/genetics , Caenorhabditis elegans Proteins/chemistry , Caenorhabditis elegans Proteins/genetics , Copper/metabolism , Gene Deletion , Humans , Mixed Function Oxygenases/chemistry , Mixed Function Oxygenases/genetics , Multienzyme Complexes/chemistry , Multienzyme Complexes/genetics , Mutation , Neuropeptides/genetics , Sequence Alignment , Tandem Mass Spectrometry
16.
Hum Genomics ; 11(1): 29, 2017 Nov 21.
Article in English | MEDLINE | ID: mdl-29162152

ABSTRACT

BACKGROUND: Peptidylglycine-α-amidating monooxygenase (PAM) may play a role in the secretion of atrial natriuretic peptide (ANP), which is a hormone involved in the maintenance of blood pressure (BP). The objective of the present study was to determine whether PAM is a novel candidate gene for hypertension (HTN). RESULTS: A total of 2153 Korean participants with normotension and HTN were included. Genotype data were obtained using the Korean Chip. The rs13175330 polymorphism of the PAM gene was selected from the ten single nucleotide polymorphisms (SNPs) most strongly associated with BP. The presence of the G allele of the PAM rs13175330 A>G SNP was associated with a higher risk of HTN after adjustments for age, sex, BMI, smoking, and drinking [OR 1.607 (95% CI 1.220-2.116), p = 0.001]. The rs13175330 G allele carriers in the HTN group treated without antihypertensive therapy (HTN w/o therapy) had significantly higher systolic and diastolic BP than the AA carriers, whereas the G allele carriers in the HTN group treated with antihypertensive therapy (HTN w/ therapy) showed significantly higher diastolic BP. Furthermore, rs13175330 G allele carriers in the HTN w/o therapy group had significantly increased levels of insulin, insulin resistance, and oxidized low-density lipoprotein (LDL) and significantly decreased LDL-cholesterol levels and LDL particle sizes compared to the AA carriers. CONCLUSION: These results suggest that the PAM rs13175330 A>G SNP is a novel candidate gene for HTN in the Korean population. Additionally, the PAM rs13175330 G allele might be associated with insulin resistance and LDL atherogenicity in patients with HTN.


Subject(s)
Amidine-Lyases/genetics , Hypertension/genetics , Mixed Function Oxygenases/genetics , Polymorphism, Single Nucleotide , Adult , Aged , Aged, 80 and over , Asian People/genetics , Blood Pressure/genetics , Case-Control Studies , Cholesterol, HDL/blood , Cholesterol, HDL/genetics , Female , Genetic Predisposition to Disease , Humans , Hypertension/etiology , Insulin/blood , Insulin Resistance/genetics , Lipoproteins, LDL/blood , Lipoproteins, LDL/genetics , Male , Middle Aged
17.
Anal Chem ; 89(13): 6992-6999, 2017 07 05.
Article in English | MEDLINE | ID: mdl-28590120

ABSTRACT

The peptide hormone calcitonin is intimately connected with human cancer development and proliferation. Its biosynthesis is reasoned to proceed via glycine-, α-hydroxyglycine-, glycyllysine-, and glycyllysyllysine-extended precursors; however, as a result of the limitations of current analytical methods, until now, there has been no procedure capable of detecting these individual species in cell or tissue samples. Therefore, their presence and dynamics in cancer had not been established. Here, we report the first methodology for the separation, detection, and quantification of calcitonin and each of its precursors in human cancer cells. We also report the discovery and characterization of O-glycosylated calcitonin and its analogous biosynthetic precursors. Through direct and simultaneous analysis of the glycosylated and nonglycosylated species, we interrogate the hormone biosynthesis. This shows that the cellular calcitonin level is maintained to mitigate effects of biosynthetic enzyme inhibitors that substantially change the proportions of calcitonin-related species released into the culture medium.


Subject(s)
Calcitonin/analogs & derivatives , Calcitonin/analysis , Chromatography, High Pressure Liquid/methods , Glycopeptides/analysis , Protein Precursors/analysis , Amidine-Lyases/antagonists & inhibitors , Calcitonin/biosynthesis , Calcitonin/metabolism , Carboxypeptidase H/antagonists & inhibitors , Cell Line, Tumor , Fatty Acids, Monounsaturated/pharmacology , Glycopeptides/biosynthesis , Glycopeptides/chemistry , Glycopeptides/metabolism , Glycosylation , Humans , Mixed Function Oxygenases/antagonists & inhibitors , Protein Precursors/biosynthesis , Protein Precursors/chemistry , Protein Precursors/metabolism , Solid Phase Extraction/methods , Succinates/pharmacology
18.
Eur J Cell Biol ; 96(5): 407-417, 2017 Aug.
Article in English | MEDLINE | ID: mdl-28377049

ABSTRACT

Peptidylglycine α-amidating monooxygenase (PAM) is highly expressed in neurons and endocrine cells, where it catalyzes one of the final steps in the biosynthesis of bioactive peptides. PAM is also expressed in unicellular organisms such as Chlamydomonas reinhardtii, which do not store peptides in secretory granules. As for other granule membrane proteins, PAM is retrieved from the cell surface and returned to the trans-Golgi network. This pathway involves regulated entry of PAM into multivesicular body intralumenal vesicles (ILVs). The aim of this study was defining the endocytic pathways utilized by PAM in cells that do not store secretory products in granules. Using stably transfected HEK293 cells, endocytic trafficking of PAM was compared to that of the mannose 6-phosphate (MPR) and EGF (EGFR) receptors, established markers for the endosome to trans-Golgi network and degradative pathways, respectively. As in neuroendocrine cells, PAM internalized by HEK293 cells accumulated in the trans-Golgi network. Based on surface biotinylation, >70% of the PAM on the cell surface was recovered intact after a 4h chase and soluble, bifunctional PAM was produced. Endosomes containing PAM generally contained both EGFR and MPR and ultrastructural analysis confirmed that all three cargos accumulated in ILVs. PAM containing multivesicular bodies made frequent dynamic tubular contacts with younger and older multivesicular bodies. Frequent dynamic contacts were observed between lysosomes and PAM containing early endosomes and multivesicular bodies. The ancient ability of PAM to localize to ciliary membranes, which release bioactive ectosomes, may be related to its ability to accumulate in ILVs and exosomes.


Subject(s)
Amidine-Lyases/metabolism , Mixed Function Oxygenases/metabolism , Multivesicular Bodies/metabolism , Protein Transport/physiology , ErbB Receptors/metabolism , HEK293 Cells , Humans , Receptor, IGF Type 2/metabolism , Secretory Vesicles/metabolism
19.
Metallomics ; 8(8): 729-33, 2016 08 01.
Article in English | MEDLINE | ID: mdl-27242196

ABSTRACT

Cuproproteins such as PHM and DBM mature in late endosomal vesicles of the mammalian secretory pathway where changes in vesicle pH are employed for sorting and post-translational processing. Colocation with the P1B-type ATPase ATP7A suggests that the latter is the source of copper and supports a mechanism where selectivity in metal transfer is achieved by spatial colocation of partner proteins in their specific organelles or vesicles. In previous work we have suggested that a lumenal loop sequence located between trans-membrane helices TM1 and TM2 of the ATPase, and containing five histidines and four methionines, acts as an organelle-specific chaperone for metallation of the cuproproteins. The hypothesis posits that the pH of the vesicle regulates copper ligation and loop conformation via a mechanism which involves His to Met ligand switching induced by histidine protonation. Here we report the effect of pH on the HM loop copper coordination using X-ray absorption spectroscopy (XAS), and show via selenium substitution of the Met residues that the HM loop undergoes similar conformational switching to that found earlier for its partner PHM. We hypothesize that in the absence of specific chaperones, HM motifs provide a template for building a flexible, pH-sensitive transfer site whose structure and function can be regulated to accommodate the different active site structural elements and pH environments of its partner proteins.


Subject(s)
Amidine-Lyases/metabolism , Cation Transport Proteins/metabolism , Copper-Transporting ATPases/metabolism , Copper/metabolism , Mixed Function Oxygenases/metabolism , Amidine-Lyases/chemistry , Amino Acid Sequence , Catalytic Domain , Cation Transport Proteins/chemistry , Copper/chemistry , Copper-Transporting ATPases/chemistry , Humans , Hydrogen-Ion Concentration , Ligands , Mixed Function Oxygenases/chemistry , Models, Molecular , Molecular Chaperones , Protein Binding , Protein Structure, Secondary , Sequence Homology , X-Ray Absorption Spectroscopy
20.
Nat Commun ; 7: 10640, 2016 Feb 16.
Article in English | MEDLINE | ID: mdl-26879543

ABSTRACT

Brain development requires a fine-tuned copper homoeostasis. Copper deficiency or excess results in severe neuro-pathologies. We demonstrate that upon neuronal differentiation, cellular demand for copper increases, especially within the secretory pathway. Copper flow to this compartment is facilitated through transcriptional and metabolic regulation. Quantitative real-time imaging revealed a gradual change in the oxidation state of cytosolic glutathione upon neuronal differentiation. Transition from a broad range of redox states to a uniformly reducing cytosol facilitates reduction of the copper chaperone Atox1, liberating its metal-binding site. Concomitantly, expression of Atox1 and its partner, a copper transporter ATP7A, is upregulated. These events produce a higher flux of copper through the secretory pathway that balances copper in the cytosol and increases supply of the cofactor to copper-dependent enzymes, expression of which is elevated in differentiated neurons. Direct link between glutathione oxidation and copper compartmentalization allows for rapid metabolic adjustments essential for normal neuronal function.


Subject(s)
Adenosine Triphosphatases/metabolism , Amidine-Lyases/metabolism , Cation Transport Proteins/metabolism , Copper/metabolism , Glutathione/metabolism , Metallochaperones/metabolism , Mixed Function Oxygenases/metabolism , Neurogenesis , Neurons/metabolism , Oxidation-Reduction , Secretory Pathway , Animals , Chick Embryo , Copper Transport Proteins , Copper-Transporting ATPases , Cytosol , Electroporation , Glutathione Disulfide/metabolism , HEK293 Cells , Humans , Immunoblotting , Molecular Chaperones , NADP/metabolism , Real-Time Polymerase Chain Reaction , Spectrophotometry, Atomic , Spinal Cord/cytology , Spinal Cord/embryology , Spinal Cord/metabolism
SELECTION OF CITATIONS
SEARCH DETAIL
...