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1.
Biomed Res Int ; 2024: 4119960, 2024.
Article in English | MEDLINE | ID: mdl-38559901

ABSTRACT

Background: Lactobacillus acidophilus is lactic acid bacteria that produce bacteriocins. Bacteriocins are antimicrobial peptides or proteins that exhibit activity against closely related bacteria. The aim of this study was to determine the effect of L. acidophilus ATCC 4356 bacteriocin against Staphylococcus aureus. Material and Methods. We used four different phenotypic methods for antimicrobial activities against two standard strains: methicillin-resistant S. aureus (MRSA) ATCC 33591 and methicillin-susceptible S. aureus (MSSA) ATCC 25923. The methods were (1) agar well diffusion, (2) overlay soft agar, (3) paper disk, and (4) modification of punch hole. The ammonium sulfate method was used to concentrate crude bacteriocin, and ultrafiltration and dialysis tubes were used to remove ammonium sulfate from the bacteriocins. Each method was repeated in triplicate. Result: L. acidophilus ATCC 4356 showed antimicrobial activity against both MRSA and MSSA standard strains only by the overlay soft agar method and not by the agar well diffusion, punch hole modification, and paper disk methods. No antimicrobial effects were observed in crude bacteriocins concentrated. Conclusion: The growth inhibition of S. aureus in overlay soft agar method may be due to the production of bacteriocin-like substances. The overlay soft agar method is a qualitative test, so there is a need for further study to optimize the conditions for the production of bacteriocin-like substances in the culture supernatant and precise comparison between the inhibitory activity and pheromone secretion of different strains.


Subject(s)
Anti-Infective Agents , Bacteriocins , Methicillin-Resistant Staphylococcus aureus , Staphylococcal Infections , Humans , Staphylococcus aureus , Bacteriocins/metabolism , Lactobacillus acidophilus , Agar/metabolism , Ammonium Sulfate/metabolism , Ammonium Sulfate/pharmacology , Anti-Infective Agents/pharmacology , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/metabolism
2.
Chemosphere ; 352: 141317, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38286306

ABSTRACT

The efficacy of using plants to phytoremediate heavy metal (HM) contaminated soils can be improved using soil amendments. These amendments may both increase plant biomasses and HMs uptake. We aimed to determine the composite effect of ammonium sulfate ((NH4)2SO4) combined with the application of an aqueous stem-extracted bio-chelator (Bidens tripartita L) on the plant biomasses and cadmium (Cd) phytoextraction by Solanum nigrum L. The constant (NH4)2SO4 application mode plus bio-chelator additives collectively enhanced the shoot Cd extraction ability owing to the increased plant biomass and shoot Cd concentration by S. nigrum. The shoot Cd extraction and the soil Cd decreased concentration confirmed the optimal Cd phytoextraction pattern in K8 and K9 treatments (co-application of (NH4)2SO4 and twofold/threefold bio-chelators). Accordingly, Cd contamination risk in the soil (2 mg kg-1) could be completely eradicated (<0.2 mg kg-1) after three rounds of phytoremediation by S.nigrum based on K8 and K9 treatments through calculating soil Cd depletion. The microorganism counts and enzyme activities in rhizosphere soils at treatments with the combined soil additives apparently advanced. In general, co-application mode of (NH4)2SO4 and aqueous bio-chelator was likely to be a perfect substitute for conventional scavenger agents on account of its environmental friendliness and cost saving for field Cd contamination phytoremediation by S. nigrum.


Subject(s)
Soil Pollutants , Solanum nigrum , Cadmium/analysis , Chelating Agents , Ammonium Sulfate/pharmacology , Soil Pollutants/analysis , Biodegradation, Environmental , Soil , Plant Roots/chemistry
3.
Pestic Biochem Physiol ; 197: 105681, 2023 Dec.
Article in English | MEDLINE | ID: mdl-38072538

ABSTRACT

Rhizoctonia solani is a widespread and devastating plant pathogenic fungus that infects many important crops. This pathogen causes tobacco target spot, a disease that is widespread in many tobacco-growing countries and is destructive to tobacco. To identify antagonistic microorganisms with biocontrol potential against this disease, we isolated Streptomyces strains from forest inter-root soil and screened a promising biocontrol strain, ZZ-21. Based on in vitro antagonism assays, ZZ-21 showed a significant inhibitory effect on R. solani and various other phytopathogens. ZZ-21 was identified as Streptomyces olivoreticuli by its phenotypic, genetic, physiological and biochemical properties. Complete genome sequencing revealed that ZZ-21 harbored numerous antimicrobial biosynthesis gene clusters. ZZ-21 significantly reduced the lesion length in detached inoculated leaf assays and reduced the disease index under greenhouse and field conditions. Based on an in vitro antagonistic assay of ZZ-21 culture, the strain exhibited an antifungal activity against R. solani in a dose-dependent manner. The culture filtrate could impair membrane integrity, possibly through membrane lipid peroxidation. ZZ-21 could secrete multiple extracellular enzymes and siderophores. According to a series of antifungal assays, the extracellular metabolites of ZZ-21 contained antimicrobial bioactive compounds composed of proteins/peptides extracted using ammonium sulfate precipitation, which were stable under stress caused by high temperature and protease K. The EC50 value for ammonium sulfate precipitation was determined to be 21.11 µg/mL in this study. Moreover, the proteins/peptides also exhibited biocontrol ability and were observed to alter the plasma membrane integrity of R. solani which were evaluated by biocontrol efficacy assays on detached tobacco leaves and PI staining. Overall, strain ZZ-21 shows the potential to be developed into a biopesticide against tobacco target spot disease.


Subject(s)
Antifungal Agents , Streptomyces , Antifungal Agents/pharmacology , Ammonium Sulfate/pharmacology , Plant Diseases/prevention & control , Plant Diseases/microbiology , Rhizoctonia , Nicotiana , Peptides/pharmacology
4.
PLoS One ; 17(8): e0272935, 2022.
Article in English | MEDLINE | ID: mdl-35994496

ABSTRACT

Application of nitrification inhibitors (NIs) with nitrogen (N) fertilizer is one of the most efficient ways to improve nitrogen use efficiency (NUE). To fully understand the efficiency of NIs with N fertilizer on soil nitrification, yield and NUE of maize (Zea mays L.), an outdoor pot experiment with different NIs in three soils with different pH was conducted. Five treatments were established: no fertilizer (Control); ammonium sulfate (AS); ammonium sulfate + 3, 4-dimethyl-pyrazolate phosphate (DMPP) (AD); ammonium sulfate + nitrogen protectant (N-GD) (AN); ammonium sulfate + 3, 4-dimethyl-pyrazolate phosphate + nitrogen protectant (ADN). The results showed that NIs treatments (AD, AN and ADN) significantly reduced soil nitrification in the brown and red soil, especially in AD and ADN, which decreased apparent nitrification rate by 28% - 44% (P < 0.05). All NIs treatments significantly increased yield and NUE of maize in three soils, especially ADN in the cinnamon soil and AD in the red soil were more efficiency, which significantly increased maize yield and apparent nitrogen recovery by 5.07 and 6.81 times, 4.39 and 8.16 times, respectively. No significant difference on maize yield was found in the brown soil, but AN significantly increased apparent nitrogen recovery by 70%. Given that the effect of NIs on both soil nitrification and NUE of maize, DMPP+N-GD was more efficient in the cinnamon soil, while N-GD and DMPP was the most efficiency in the brown and red soil, respectively. In addition, soil pH and soil organic matter play important role in the efficiency of NIs.


Subject(s)
Nitrification , Soil , Ammonium Sulfate/pharmacology , Dimethylphenylpiperazinium Iodide/pharmacology , Fertilizers/analysis , Nitrogen/pharmacology , Phosphates/pharmacology , Zea mays
5.
Biotechnol Lett ; 43(2): 407-414, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33151450

ABSTRACT

OBJECTIVE: In this study, we aimed to maximize glutathione (GSH) production by a metabolically engineered Yarrowia lipolytica strain using a small-scale optimization approach. RESULTS: A three levels four factorial Box-Behnken Design was used to assess the effect of pH, inulin extract, yeast extract and ammonium sulfate concentrations on cell growth and to generate a mathematical model which predict optimal conditions to maximize biomass production and thus GSH titer. The obtained results revealed that only yeast and inulin extract concentrations significantly affect biomass production. Based on the generated model, a medium composed of 10 g/L of yeast extract and 10 g/L of inulin extract from Jerusalem artichoke was used to conduct batch cultures in 2 L bioreactor. After 48 h of culture, the biomass and the glutathione titer increased by 55% (5.8 gDCW/L) and 61% (1011.4 mg/L), respectively, as compared to non-optimized conditions. CONCLUSION: From the obtained results, it could be observed that the model established from small scale culture (i.e. 2 mL) is able to predict performance at larger scale (i.e. 2 L bioreactor, two orders of magnitude scale-up). Moreover, the results highlight the ability of the optimized process to ensure high titer of glutathione using a low-cost carbon source.


Subject(s)
Bioreactors , Glutathione/biosynthesis , Metabolic Engineering , Yarrowia/genetics , Ammonium Sulfate/pharmacology , Batch Cell Culture Techniques , Cell Proliferation/drug effects , Culture Media , Fermentation , Glutathione/isolation & purification , Inulin/pharmacology , Models, Theoretical , Yeasts/chemistry
6.
G Ital Med Lav Ergon ; 42(3): 153-159, 2020 09.
Article in English | MEDLINE | ID: mdl-33119975

ABSTRACT

SUMMARY: Aim of the study. Inhaled ammonium persulphate (AP) reduces non adrenergic, non cholinergic (NANC) relaxation in the guinea pig trachea, as a part of its inflammatory effects. Peroxisome Proliferator-Activated Receptor (PPAR) stimulation has shown anti-inflammatory properties. This study aimed at evaluating whether the PPAR-α agonist WY 14643 can prevent the reduction in NANC relaxation caused by inhaled AP in the guinea pig trachea. Materials and Methods. Four groups of ten male guinea pigs were treated for three weeks with inhaled AP (10 mg/m3, 30 min per day, group A), saline (group B), AP and WY 14643 (0.36 µM/die, per os, group C), and AP, WY 14643 and the PPAR-α antagonist GW 6471 (0.36 µM/die, per os, group D). NANC relaxations to electrical field stimulation (EFS) at 3 Hz were evaluated in whole tracheal segments as intraluminal pressure changes. Results. The tracheal NANC relaxations were reduced by 90.3% in group A, as compared to group B. In group C, they were reduced by only 22.2%. In group D, they were reduced by 92.6 %. PPAR-α receptors were detected in inhibitory nerve fibers within the trachea as shown by immonohistochemical analysis. Conclusions. The PPAR-α agonist WY 14643 protects the NANC inhibitory system of the guinea pig trachea from the effect of inhaled ammonium persulphate and its protective effect is antagonized by GW 6471. PPAR-α might be exploited.


Subject(s)
Ammonium Sulfate/antagonists & inhibitors , Muscle Relaxation/drug effects , PPAR alpha/agonists , Pyrimidines/pharmacology , Trachea/drug effects , Administration, Inhalation , Adrenergic beta-Agonists/pharmacology , Ammonium Sulfate/administration & dosage , Ammonium Sulfate/pharmacology , Animals , Electric Stimulation/methods , Guinea Pigs , Isoproterenol/pharmacology , Male , Nerve Fibers/chemistry , Oxazoles/administration & dosage , Oxazoles/pharmacology , PPAR alpha/antagonists & inhibitors , Pilot Projects , Random Allocation , Trachea/innervation , Tyrosine/administration & dosage , Tyrosine/analogs & derivatives , Tyrosine/pharmacology
7.
ACS Appl Mater Interfaces ; 12(41): 45814-45821, 2020 Oct 14.
Article in English | MEDLINE | ID: mdl-32877162

ABSTRACT

The determination of T4 polynucleotide kinase (PNK) activity and the screening of PNK inhibitors are critical to disease diagnosis and drug discovery. Numerous electrochemical strategies have been developed for the sensitive measurement of PNK activity and inhibition. However, they often suffer from additional labels and multiple steps of the detection process for the electrochemical readout. Herein, we have demonstrated an electrochemical DNA (E-DNA) sensor for the one-step detection of PNK with "signal-on" readout with no need for additional labels. In our design, the highly switchable double-stranded DNA (dsDNA) probes are immobilized on the gold nanoparticle-decorated molybdenum disulfide nanomaterial (MoS2-AuNPs), which possesses large surface area and high conductivity for elevating the signal gain in the PNK detection. This signal-on E-DNA sensor integrated with MoS2-AuNPs exhibits a much higher sensitivity than that without MoS2-AuNPs, showing a detection limit of 2.18 × 10-4 U/mL. Furthermore, this assay shows high selectivity, with the ability to discriminate PNK from other enzymes and proteins, and can be utilized to screen inhibitors. The proposed sensor is easy to operate with one-step readout and robust for PNK detection in the biological matrix and shows great potential for point-of-care in clinical diagnostics and drug screening.


Subject(s)
Biosensing Techniques , DNA, Neoplasm/analysis , Disulfides/chemistry , Electrochemical Techniques , Enzyme Inhibitors/pharmacology , Molybdenum/chemistry , Polynucleotide 5'-Hydroxyl-Kinase/antagonists & inhibitors , Adenosine Diphosphate/chemistry , Adenosine Diphosphate/pharmacology , Ammonium Sulfate/chemistry , Ammonium Sulfate/pharmacology , Enzyme Inhibitors/chemistry , Gold/chemistry , HeLa Cells , Humans , Metal Nanoparticles/chemistry , Phosphates/chemistry , Phosphates/pharmacology , Polynucleotide 5'-Hydroxyl-Kinase/metabolism
8.
Int J Biol Macromol ; 165(Pt B): 2649-2659, 2020 Dec 15.
Article in English | MEDLINE | ID: mdl-32991898

ABSTRACT

Cancer is an abnormal growth of cells due to the uncontrolled division of the cells and it is the second leading cause of death globally. Immune system malfunction, inflammatory diseases, microbial infection, and oxidative damage are other causes for death. This prompted us to search for non-traditional materials that can be used as anti-cancer, anti-microbial, anti-oxidant and anti-inflammatory agents. Chitosan as a non-toxic, biodegradable, biopolymer with powerful biological activity was grafted with acidified 2-aminothiophenol (2-ATH) using aqueous chemical oxidative copolymerization in presence of ammonium persulphate (APS) as an oxidant at room temperature. The prepared polymeric samples were assembled on silver nanoparticles (AgNPs). The prepared polymeric structure nano-composites were verified by infrared, ultraviolet-visible spectroscopy, X-ray diffraction, thermogravimetric analysis scanning electron microscopy and transmission electron microscopy. The prepared polymeric samples and their composites with AgNPs were screened for their biological activities as anti-cancer properties, anti-microbial, anti-oxidant and anti-inflammatory. The obtained data reveal that chitosan-gr-poly (2-aminothiophenol) (chitosan-gr-p2-ATH) has the most potent anti-oxidant and anti-cancer effects against HepG2 while the composites of p2-ATH with AgNPs and chitosan-gr-p2-ATH with AgNPs have the most potent anti-inflammatory properties.


Subject(s)
Chitosan/chemistry , Metal Nanoparticles/chemistry , Polymers/chemistry , Ammonium Sulfate/chemistry , Ammonium Sulfate/pharmacology , Cell Proliferation/drug effects , Chitosan/therapeutic use , Humans , Immune System/drug effects , Metal Nanoparticles/therapeutic use , Microscopy, Electron, Scanning , Microscopy, Electron, Transmission , Neoplasms/drug therapy , Oxidation-Reduction/drug effects , Polymers/therapeutic use , Silver/chemistry , Staphylococcus aureus
9.
Molecules ; 25(16)2020 Aug 10.
Article in English | MEDLINE | ID: mdl-32785146

ABSTRACT

Providing yeast with the right amount of mineral salts before fermentation can contribute to improving the entire technological process, resulting in a better-quality final product. The aim of this study was to assess the impact of apple must supplementation with mineral salts ((NH4)2SO4, MgSO4, (NH4)3PO4)) on enological parameters, antioxidant activity, total polyphenol content, and the profile of volatile cider compounds fermented with various yeast strains. Rubin cultivar must was inoculated with wine, cider, and distillery or wild yeast strains. Various mineral salts and their mixtures were introduced into the must in doses from 0.167 g/L to 0.5 g/L. The control sample consisted of ciders with no added mineral salts. The basic enological parameters, antioxidant properties, total polyphenol content, and their profile, as well as the composition of volatile compounds, were assessed in ciders. Must supplementation with magnesium salts significantly influenced the use of the analyzed element by yeast cells and was dependent on the yeast strain. In supplemented samples, a decrease in alcohol concentration and total acidity, as well as an increase in the content of extract and total polyphenols, was observed compared to the controls. The addition of ammonium salts caused a decrease in the amount of higher alcohols and magnesium salts, as well as a decrease in the concentration of some esters in ciders.


Subject(s)
Alcoholic Beverages/analysis , Ammonium Sulfate/chemistry , Food Quality , Magnesium Sulfate/chemistry , Phosphates/chemistry , Ammonium Sulfate/pharmacology , Antioxidants/chemistry , Chromatography, High Pressure Liquid , Fermentation , Magnesium Sulfate/pharmacology , Malus/chemistry , Malus/metabolism , Phosphates/pharmacology , Polyphenols/analysis , Saccharomyces cerevisiae/drug effects , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae/metabolism , Solid Phase Extraction , Volatile Organic Compounds/analysis , Volatile Organic Compounds/isolation & purification
10.
PLoS One ; 15(3): e0229216, 2020.
Article in English | MEDLINE | ID: mdl-32134955

ABSTRACT

RNA biogenesis and mRNA transport are an intricate process for every eukaryotic cell. SAGA, a transcriptional coactivator and TREX-2 are the two major complexes participate in this process. Sus1 is a transcription export factor and part of both the SAGA and the TREX-2 complex. The competitive exchange of Sus1 molecule between SAGA and TREX-2 complex modulates their function which is credited to structural plasticity of Sus1. Here, we portray the biophysical characterization of Sus1 from S. cerevisiae. The recombinant Sus1 is a α-helical structure which is stable at various pH conditions. We reported the α-helix to ß-sheet transition at the low pH as well as at high pH. Sus1 showed 50% reduction in the fluorescence intensity at pH-2 as compared to native protein. The fluorescence studies demonstrated the unfolding of tertiary structure of the protein with variation in pH as compared to neutral pH. The same results were obtained in the ANS binding and acrylamide quenching studies. Similarly, the secondary structure of the Sus1 was found to be stable till 55% alcohol concentration while tertiary structure was stable up to 20% alcohol concentration. Further increase in the alcohol concentration destabilizes the secondary as well as tertiary structure. The 300 mM concentration of ammonium sulfate also stabilizes the secondary structure of the protein. The structural characterization of this protein is expected to unfold the process of the transportation of the mRNA with cooperation of different proteins.


Subject(s)
Cloning, Molecular/methods , Nuclear Proteins/chemistry , Nuclear Proteins/genetics , RNA-Binding Proteins/chemistry , RNA-Binding Proteins/genetics , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae/metabolism , Ammonium Sulfate/pharmacology , Hydrogen-Ion Concentration , Models, Molecular , Nuclear Proteins/metabolism , Protein Binding , Protein Stability/drug effects , Protein Structure, Tertiary , Protein Unfolding , RNA-Binding Proteins/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Saccharomyces cerevisiae/chemistry , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/metabolism
11.
Int J Biol Macromol ; 148: 715-721, 2020 Apr 01.
Article in English | MEDLINE | ID: mdl-31935403

ABSTRACT

Antrodia cinnamomea is an important medicinal fungus in Taiwan. This study demonstrates changes of complex sulfated polysaccharides (SPS) by fungus A. cinnamomea after ammonium sulfate-feeding and evaluates its anti-inflammatory activities. The addition of 1 mM ammonium sulfate showed maximal sulfate content of SPS in value of 1.82 mmol/g. Ammonium sulfate changes the physiochemical properties of SPS in that area percentage of SPSs (361 kDa) was increased for 1 mM ammonium sulfate to the value of 26 percentage area. SPS of 1 mM ammonium sulfate-fed A. cinnamomea (AM-SPS) had maximal inhibition of LPS-induced tumor necrosis factor (TNF-α) release in RAW264.7 macrophage. Iκ-B degradation induced by LPS in macrophages was reversed by AM-SPS. Suppression of NF-κB activation might have been responsible for the anti-inflammatory effects. Meanwhile, the inhibition was also due to suppressing the AKT, and ERK signaling pathway. Our finding suggests that ammonium sulfate is a useful nutrient for production of SPS for neutraceutical and pharmaceutical applications.


Subject(s)
Ammonium Sulfate/pharmacology , Anti-Inflammatory Agents/pharmacology , Antrodia/chemistry , Inflammation/drug therapy , Polysaccharides/pharmacology , Sulfates/pharmacology , Animals , Cell Line , Cell Survival/drug effects , Inflammation/metabolism , Macrophages/drug effects , Macrophages/metabolism , Mice , RAW 264.7 Cells , Signal Transduction/drug effects , Tumor Necrosis Factor-alpha/metabolism
12.
Biotechnol Lett ; 41(11): 1309-1318, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31559517

ABSTRACT

Chaotropes are compounds which cause the disordering, unfolding and denaturation of biological macromolecules. It is the chaotropicity of fermentation products that often acts as the primary limiting factor in ethanol and butanol fermentations. Since ethanol is mildly chaotropic at low concentrations, it prevents the growth of the producing microbes via its impacts on a variety of macromolecular systems and their functions. Kosmotropes have the opposite effect to chaotropes and we hypothesised that it might be possible to use these to mitigate chaotrope-induced inhibition of Saccharomyces cerevisiae growth. We also postulated that kosmotrope-mediated mitigation of chaotropicity is not quantitatively predictable. The chaotropes ethanol and urea, and compatible solutes glycerol and betaine (kosmotrope), and the highly kosmotropic salt ammonium sulphate all inhibited the growth rate of Saccharomyces cerevisiae in the concentration range 5-15%. They resulted in increased lag times, decreased maximum specific growth rates, and decreased final optical densities. Surprisingly, neither the stress protectants nor ammonium sulphate reduced the inhibition of growth caused by ethanol. Whereas, in some cases, compatible solutes and kosmotropes mitigated against the inhibitory effects of urea. However, this effect was not mathematically additive from the quantification of chao-/kosmotropicity of each individual compound. The potential effects of glycerol, betaine and/or ammonium sulphate may have been reduced or masked by the metabolic production of compatible solutes. It may nevertheless be that the addition of kosmotropes to fermentations which produce chaotropic products can enhance metabolic activity, growth rate, and/or product formation.


Subject(s)
Biofuels/microbiology , Models, Biological , Saccharomyces cerevisiae , Ammonium Sulfate/pharmacology , Betaine/metabolism , Culture Media/chemistry , Culture Media/pharmacology , Entropy , Ethanol/metabolism , Ethanol/pharmacology , Fermentation , Glycerol/metabolism , Saccharomyces cerevisiae/drug effects , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae/metabolism , Urea/pharmacology
13.
Biotechnol Prog ; 35(5): e2867, 2019 09.
Article in English | MEDLINE | ID: mdl-31187591

ABSTRACT

The cyclodextrin glycosyltransferase (CGTase) is an important enzyme for cyclodextrin (CD) production, and is also widely used in the biotechnology, food, and pharmaceuticals industries. Secretory CGTase production by recombinant Komagataella phaffii using defined medium is a promising approach because of low cost, less impurity protein. It was found that no CGTase was expressed using traditional defined medium (basal salt medium [BSM]) because of pH value decreasing significantly. CGTase was expressed by recombinant K. phaffii through pH maintenance in range of 5.5-7.0. ß-CGTase activity increased to 122.0 U/mL after optimization of glycerol, phosphate buffer, pH value, ammonium sulfate, temperature, methanol, and additives based on BSM, establishing a modified defined medium. These results showed that it was necessary to establish recombinant K. phaffii-based special defined medium although the same host cell used for different heterologous protein expression.


Subject(s)
Culture Media , Glucosyltransferases/metabolism , Recombinant Proteins/metabolism , Saccharomycetales/metabolism , Ammonium Sulfate/metabolism , Ammonium Sulfate/pharmacology , Biotechnology , Culture Media/chemistry , Culture Media/metabolism , Culture Media/pharmacology , Glucosyltransferases/analysis , Glucosyltransferases/genetics , Glycerol/metabolism , Glycerol/pharmacology , Hydrogen-Ion Concentration , Methanol/metabolism , Methanol/pharmacology , Recombinant Proteins/analysis , Recombinant Proteins/genetics , Saccharomycetales/genetics , Temperature
14.
Colloids Surf B Biointerfaces ; 170: 430-437, 2018 Oct 01.
Article in English | MEDLINE | ID: mdl-29957532

ABSTRACT

Sodium dodecyl sulfate (SDS) is an anionic surfactant that can be used to stimulate protein fibrillation in vitro. Here, we investigated the effects of SDS on camel IgG aggregation at pH 3.5 and 7.4. SDS-induced amyloid fibril formation in camel IgG was examined by turbidity measurements, Rayleigh scattering, Thioflavin T (ThT) fluorescence, intrinsic fluorescence, circular dichroism (CD), and transmission electron microscopy (TEM). The results suggest that low SDS concentrations (0.2-2.0 mM) induce amyloid-like aggregates of camel IgG at pH 3.5, indicating an SDS/camel IgG ratio below 1000. However, in the presence of higher concentrations of SDS (2.5-10.0 mM), amyloid fibril formation was not observed. Furthermore, at the higher concentrations, the ß-sheet structure of camel IgG was transformed into a α-helical structure. The amyloid fibril formation was not observed in the presence of SDS at pH 7.4. Additionally, the role of salts and sugars was evaluated in the SDS-induced aggregation process. Interestingly, in the presence of 0.15 N of NaCl and (NH4)2SO4, SDS promoted camel IgG aggregation up to very high concentrations of SDS (0.2-10.0 mM; SDS/camel IgG ratio, 95-4750) and no suppression was observed. Moreover, osmoprotectants (trehalose and sucrose) were ineffective, neither promoting nor inhibiting the SDS-induced aggregation process. However, at pH 3.5, electrostatic and hydrophobic interactions, and hydrogen bonds were the major contributing factors in SDS-induced fibrillation. However, no aggregation was observed at pH 7.4 due to electrostatic repulsion between SDS and camel IgG because both of these molecules have overall similar charges.


Subject(s)
Ammonium Sulfate/pharmacology , Amyloid/drug effects , Immunoglobulin G/chemistry , Protein Aggregates/drug effects , Sodium Chloride/pharmacology , Sodium Dodecyl Sulfate/pharmacology , Sugars/pharmacology , Surface-Active Agents/pharmacology , Ammonium Sulfate/chemistry , Animals , Camelus , Dose-Response Relationship, Drug , Hydrogen-Ion Concentration , Immunoglobulin G/metabolism , Particle Size , Salts/chemistry , Salts/pharmacology , Sodium Chloride/chemistry , Sodium Dodecyl Sulfate/chemistry , Structure-Activity Relationship , Sugars/chemistry , Surface Properties , Surface-Active Agents/chemistry
15.
Nature ; 556(7699): 89-94, 2018 04 04.
Article in English | MEDLINE | ID: mdl-29620730

ABSTRACT

The formation of condensed (compacted) protein phases is associated with a wide range of human disorders, such as eye cataracts, amyotrophic lateral sclerosis, sickle cell anaemia and Alzheimer's disease. However, condensed protein phases have their uses: as crystals, they are harnessed by structural biologists to elucidate protein structures, or are used as delivery vehicles for pharmaceutical applications. The physiochemical properties of crystals can vary substantially between different forms or structures ('polymorphs') of the same macromolecule, and dictate their usability in a scientific or industrial context. To gain control over an emerging polymorph, one needs a molecular-level understanding of the pathways that lead to the various macroscopic states and of the mechanisms that govern pathway selection. However, it is still not clear how the embryonic seeds of a macromolecular phase are formed, or how these nuclei affect polymorph selection. Here we use time-resolved cryo-transmission electron microscopy to image the nucleation of crystals of the protein glucose isomerase, and to uncover at molecular resolution the nucleation pathways that lead to two crystalline states and one gelled state. We show that polymorph selection takes place at the earliest stages of structure formation and is based on specific building blocks for each space group. Moreover, we demonstrate control over the system by selectively forming desired polymorphs through site-directed mutagenesis, specifically tuning intermolecular bonding or gel seeding. Our results differ from the present picture of protein nucleation, in that we do not identify a metastable dense liquid as the precursor to the crystalline state. Rather, we observe nucleation events that are driven by oriented attachments between subcritical clusters that already exhibit a degree of crystallinity. These insights suggest ways of controlling macromolecular phase transitions, aiding the development of protein-based drug-delivery systems and macromolecular crystallography.


Subject(s)
Aldose-Ketose Isomerases/chemistry , Crystallization/methods , Nanoparticles/chemistry , Aldose-Ketose Isomerases/genetics , Aldose-Ketose Isomerases/ultrastructure , Ammonium Sulfate/chemistry , Ammonium Sulfate/pharmacology , Binding Sites , Cryoelectron Microscopy , Gels/chemistry , Gels/pharmacology , Microscopy, Electron, Transmission , Mutagenesis, Site-Directed , Nanoparticles/ultrastructure , Phase Transition/drug effects , Polyethylene Glycols/chemistry , Polyethylene Glycols/pharmacology , Streptomyces/enzymology
17.
Sci Rep ; 7(1): 11769, 2017 09 18.
Article in English | MEDLINE | ID: mdl-28924225

ABSTRACT

Ammonium persulfate (APS), a low molecular weight chemical compound with strong oxidizing properties, should to be totally removed during preparation of nanomaterials due to its cytotoxicity. APS exerts its oxidative stress effects mainly on cell membrane, but its intracellular influence remains unclear. Here, we designed a facile negatively-charged carboxylic gelatin-methyacrylate (carbox-GelMA) nanoparticle (NP) as a cargo-carrier through the catalytic and oxidizing action of APS in W/O system. The formed APS-loaded carbox-GelMA NPs (APS/NPs) were transported into the lysosome in MCF-7 breast cancer cells. The intracellular APS/NPs produced a high level of oxidative stress in lysosome and induced epithelial-mesenchymal transition (EMT). Consequently, the MCF-7 cells challenged with APS/NPs had a strong metastatic and invasive capability in vitro and in vivo. This study highlights that a facile APS-loaded nanocarrier has cyctotoxicity on cells through EMT. Unexpectedly, we found a novel pathway inducing EMT via lysosomal oxidative stress.


Subject(s)
Ammonium Sulfate , Breast Neoplasms , Cytotoxins , Epithelial-Mesenchymal Transition/drug effects , Nanoparticles , Oxidative Stress/drug effects , Ammonium Sulfate/chemistry , Ammonium Sulfate/pharmacology , Animals , Breast Neoplasms/drug therapy , Breast Neoplasms/metabolism , Breast Neoplasms/pathology , Cytotoxins/chemistry , Cytotoxins/pharmacology , Humans , MCF-7 Cells , Mice , Mice, Inbred BALB C , Mice, Nude , Nanoparticles/chemistry , Nanoparticles/therapeutic use , Xenograft Model Antitumor Assays
18.
Microb Cell Fact ; 16(1): 117, 2017 Jul 11.
Article in English | MEDLINE | ID: mdl-28693509

ABSTRACT

BACKGROUND: Industrial processes for recombinant protein production challenge production hosts, such as the yeast Pichia pastoris, on multiple levels. During a common P. pastoris fed-batch process, cells experience strong adaptations to different metabolic states or suffer from environmental stresses due to high cell density cultivation. Additionally, recombinant protein production and nutrient limitations are challenging in these processes. RESULTS: Pichia pastoris producing porcine carboxypeptidase B (CpB) was cultivated in glucose or methanol-limited fed-batch mode, and the cellular response was analyzed using microarrays. Thereby, strong transcriptional regulations in transport-, regulatory- and metabolic processes connected to sulfur, phosphorus and nitrogen metabolism became obvious. The induction of these genes was observed in both glucose- and methanol- limited fed batch cultivations, but were stronger in the latter condition. As the transcriptional pattern was indicative for nutrient limitations, we performed fed-batch cultivations where we added the respective nutrients and compared them to non-supplemented cultures regarding cell growth, productivity and expression levels of selected biomarker genes. In the non-supplemented reference cultures we observed a strong increase in transcript levels of up to 89-fold for phosphorus limitation marker genes in the late fed-batch phase. Transcript levels of sulfur limitation marker genes were up to 35-fold increased. By addition of (NH4)2SO4 or (NH4)2HPO4, respectively, we were able to suppress the transcriptional response of the marker genes to levels initially observed at the start of the fed batch. Additionally, supplementation had also a positive impact on biomass generation and recombinant protein production. Supplementation with (NH4)2SO4 led to 5% increase in biomass and 52% higher CpB activity in the supernatant, compared to the non-supplemented reference cultivations. In (NH4)2HPO4 supplemented cultures 9% higher biomass concentrations and 60% more CpB activity were reached. CONCLUSIONS: Transcriptional analysis of P. pastoris fed-batch cultivations led to the identification of nutrient limitations in the later phases, and respective biomarker genes for indication of limitations. Supplementation of the cultivation media with those nutrients eliminated the limitations on the transcriptional level, and was also shown to enhance productivity of a recombinant protein. The biomarker genes are versatily applicable to media and process optimization approaches, where tailor-made solutions are envisioned.


Subject(s)
Batch Cell Culture Techniques , Pichia/genetics , Pichia/physiology , Recombinant Proteins/biosynthesis , Ammonium Sulfate/pharmacology , Animals , Biomarkers , Biomass , Carboxypeptidase B/biosynthesis , Carboxypeptidase B/genetics , Culture Media/chemistry , Fungal Proteins/genetics , Fungal Proteins/metabolism , Gene Expression Profiling , Glucose/metabolism , Glucose/pharmacology , Methanol/metabolism , Microarray Analysis , Pichia/drug effects , Recombinant Proteins/isolation & purification , Swine
19.
Allergy ; 72(11): 1720-1727, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28439933

ABSTRACT

BACKGROUND: The role of immunoglobulin (Ig)-E in occupational asthma (OA) due to low molecular weight (LMW) agents is not well established compared to classical atopic asthma. In this study, we evaluate whether anti-IgE monoclonal antibody (mAb) has an effect in a mouse model of OA, using persulfate salts. METHODS: On days 1 and 8, BALB/C mice were dermally sensitized with 5% ammonium persulfate (AP) or dimethyl sulfoxide (DMSO). On days 15, 18, and 21, animals were injected intraperitoneally with anti-IgE mAb or PBS 6 hours before challenge with AP or saline. Airway hyper-responsiveness (AHR) using a methacholine test, airway inflammation in bronchoalveolar lavage (BAL) and lung tissue, and total free IgE in serum samples were analyzed 24, 48, and 96 hours after the last challenge. RESULTS: Anti-IgE mAb treatment almost completely neutralized free serum IgE. In AP-sensitized and challenged mice, anti-IgE mAb treatment abolished AHR 24 hour and 48 hour after the last challenge and significantly reduced the total number of eosinophils and neutrophils 48 hour and 96 hour after the last AP challenge compared with nontreated mice. Levels of interleukin (IL)-13 in BAL were also significantly decreased after anti-IgE administration 24 hour and 48 hour after the last AP challenge. Histological analysis of the lung sections from anti-IgE-treated mice revealed normal inflammatory patterns similar to control groups 48 hour after the last challenge. CONCLUSIONS: Anti-IgE-treated mice showed a significant improvement in asthma features related to the AHR and airway inflammation. Anti-IgE mAb has positive effects in OA induced by persulfate salts.


Subject(s)
Antibodies, Anti-Idiotypic/pharmacology , Asthma, Occupational/drug therapy , Ammonium Sulfate/pharmacology , Animals , Antibodies, Anti-Idiotypic/therapeutic use , Asthma, Occupational/etiology , Inflammation/drug therapy , Mice , Mice, Inbred BALB C , Molecular Weight , Respiratory Hypersensitivity/drug therapy
20.
J Environ Manage ; 186(Pt 2): 233-239, 2017 Jan 15.
Article in English | MEDLINE | ID: mdl-27217079

ABSTRACT

Screening of optimal chelating ligands which not only have high capacities to enhance plant uptake of mercury (Hg) from soil but also can decrease bioavailable Hg concentration in soil is necessary to establish a viable chemically-assisted phytoextraction. Therefore, Brassica juncea was exposed to historically Hg-contaminated soil (total Hg, 90 mg kg-1) to investigate the efficiency of seven chelating agents [ammonium thiosulphate, sodium thiosulphate, ammonium sulfate, ammonium chloride, sodium nitrate, ethylenediaminetetraacetic acid (EDTA), and sodium sulfite] at enhancing Hg phytoextraction; the leaching of bioavailable Hg caused by these chelating agents was also investigated. The Hg concentration in control (treated with double-distilled water) plant tissues was below 1 mg kg-1. The remarkably higher Hg concentration was found in plants receiving ammonium thiosulphate and sodium sulfite treatments. The bioaccumulation factors and translocation factors of ammonium thiosulphate and sodium sulfite treatments were significantly higher than those of the other treatments. The more efficient uptake of Hg by plants upon treatment with ammonium thiosulphate and sodium sulfite compared to the other treatments might be explained by the formation of special Hg-thiosulphate complexes that could be preferentially taken up by the roots and transported in plant tissues. The application of sulfite significantly increased bioavailable Hg concentration in soil compared with that in initial soil and control soil, whereas ammonium thiosulphate significantly decreased bioavailable Hg concentration. The apparent decrease of bioavailable Hg in ammonium thiosulphate-treated soil compared with that in sodium sulfite-treated soil might be attributable to the unstable Hg-thiosulphate complexes formed between thiosulphate and Hg; they could react to produce less bioavailable Hg in the soil. The results of this study indicate that ammonium thiosulphate may be an optimal chelating ligand for phytoextraction due to its great potential to enhance Hg accumulation in plants while decreasing bioavailable Hg concentration in the soil.


Subject(s)
Chelating Agents/chemistry , Mercury/pharmacokinetics , Mustard Plant/metabolism , Soil Pollutants/pharmacokinetics , Ammonium Sulfate/chemistry , Ammonium Sulfate/pharmacology , Biodegradation, Environmental , Chelating Agents/pharmacology , Edetic Acid/chemistry , Environmental Pollution , Mercury/isolation & purification , Mustard Plant/chemistry , Mustard Plant/drug effects , Nitrates/chemistry , Nitrates/pharmacology , Plant Roots/chemistry , Plant Roots/metabolism , Soil Pollutants/analysis , Soil Pollutants/isolation & purification , Thiosulfates/chemistry , Thiosulfates/pharmacology
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