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1.
Plant Cell Rep ; 37(3): 411-424, 2018 Mar.
Article in English | MEDLINE | ID: mdl-29177844

ABSTRACT

KEY MESSAGE: Fra a 1 protein in strawberry causes oral allergic syndrome. Over 39 Fra a 1 paralogs have been identified in strawberry genome. Fra a 1.01 is major accumulating protein in edible organs. Strawberry fruits contain allergenic proteins that cause oral allergic syndrome. The hypothesized major allergen is Fra a 1, an ortholog of the birch pollen allergen protein Bet v 1. We organized Fra a 1 genes and analyzed their localizations at the transcriptional and translational levels. In total, 15 new Fra a 1 proteins were identified from the genomic database, increasing the total number of Fra a 1 to 30 proteins encoded by 39 genes. Fra a 1.02 was mostly expressed in receptacles, and Fra a 1.01 in achenes, when analyzed by RNA sequencing. Immunoblotting showed that the Fra a 1.01 protein was broadly accumulated in strawberry organs, while the Fra a 1.02 protein was mostly expressed in receptacles. Recombinant Fra a 1.01 strongly reacted with human IgE. The mRNA and protein expression levels of Fra a 1 did not correlate, indicating the importance of protein levels when evaluating the abundance of allergens in strawberry. Based on the localizations, accumulation levels and reactivity to human IgE, we determined that Fra a 1.01 was the most important allergen, followed by Fra a 1.02, and then other Fra a 1 proteins. The information obtained here will be useful for selecting the target Fra a 1 paralogs when breeding hypoallergenic strawberry.


Subject(s)
Allergens/genetics , Antigens, Plant/genetics , Fragaria/genetics , Fruit/genetics , Plant Proteins/genetics , Allergens/immunology , Allergens/metabolism , Amino Acid Sequence , Animals , Antigens, Plant/classification , Antigens, Plant/metabolism , Fragaria/metabolism , Fruit/metabolism , Gene Expression Profiling , Gene Expression Regulation, Plant , Guinea Pigs , Humans , Immune Sera/immunology , Immunoblotting , Immunoglobulin E/immunology , Organ Specificity/genetics , Phylogeny , Plant Proteins/metabolism , Sequence Analysis, RNA , Sequence Homology, Amino Acid
2.
Biochimie ; 106: 1-9, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25019490

ABSTRACT

This review article aims to gather all the knowledge on two important proteins associated with Hevea brasiliensis rubber particles: namely the rubber elongation factor (REF) and the small rubber particle protein (SRPP). It covers more then three decades of research on these two proteins and their homologues in plants, and particularly emphasizes on the different possible properties or functions of these various proteins found in plants.


Subject(s)
Antigens, Plant/metabolism , Hevea/metabolism , Plant Proteins/metabolism , Rubber/metabolism , Amino Acid Sequence , Antigens, Plant/classification , Antigens, Plant/genetics , Hevea/genetics , Latex/chemistry , Latex/metabolism , Lipids/chemistry , Molecular Sequence Data , Phylogeny , Plant Proteins/classification , Plant Proteins/genetics , Rubber/chemistry , Sequence Homology, Amino Acid
3.
Plant Mol Biol ; 82(3): 239-53, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23686450

ABSTRACT

Drought is one of the critical factors limiting reproductive yields of rice and other crops globally. However, little is known about the molecular mechanism underlying reproductive development under drought stress in rice. To explore the potential gene function for improving rice reproductive development under drought, a drought induced gene, Oryza sativa Drought-Induced LTP (OsDIL) encoding a lipid transfer protein, was identified from our microarray data and selected for further study. OsDIL was primarily expressed in the anther and mainly responsive to abiotic stresses, including drought, cold, NaCl, and stress-related plant hormone abscisic acid (ABA). Compared with wild type, the OsDIL-overexpressing transgenic rice plants were more tolerant to drought stress during vegetative development and showed less severe tapetal defects and fewer defective anther sacs when treated with drought at the reproductive stage. The expression levels of the drought-responsive genes RD22, SODA1, bZIP46 and POD, as well as the ABA synthetic gene ZEP1 were up-regulated in the OsDIL-overexpression lines but the ABA degradation gene ABAOX3 was down-regulated. Moreover, overexpression of OsDIL lessened the down-regulation by drought of anther developmental genes (OsC4, CYP704B2 and OsCP1), providing a mechanism supporting pollen fertility under drought. Overexpression of OsDIL significantly enhanced drought resistance in transgenic rice during reproductive development, while showing no phenotypic changes or yield penalty under normal conditions. Therefore, OsDIL is an excellent candidate gene for genetic improvement of crop yield in adaption to unfavorable environments.


Subject(s)
Adaptation, Physiological/genetics , Antigens, Plant/genetics , Carrier Proteins/genetics , Droughts , Oryza/genetics , Plant Proteins/genetics , Adaptation, Physiological/physiology , Amino Acid Sequence , Antigens, Plant/classification , Antigens, Plant/physiology , Carrier Proteins/classification , Carrier Proteins/physiology , Flowers/genetics , Flowers/physiology , Gene Expression Profiling , Gene Expression Regulation, Developmental , Gene Expression Regulation, Plant , Molecular Sequence Data , Oligonucleotide Array Sequence Analysis , Oryza/physiology , Phylogeny , Plant Proteins/classification , Plant Proteins/physiology , Plants, Genetically Modified , RNA, Small Interfering/genetics , Reproduction/genetics , Reproduction/physiology , Reverse Transcriptase Polymerase Chain Reaction , Sequence Homology, Amino Acid
4.
Iran J Allergy Asthma Immunol ; 12(1): 18-28, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23454775

ABSTRACT

Molecular evidence on the heterogeneity present in the Ole e 1 allergen of the olive pollen is emerging. Such polymorphism is dependent on the cultivar origin of pollen, which also determines wide differences in the expression of this protein. Determination of biochemical and molecular characteristics of Ole e 1 pollen allergen in two Iranian olive cultivars, namely 'Rowghani' and 'Zard' is necessary to assess their allergenicity potential. SDS-PAGE and immunoblotting analysis of pollen extracts showed that both cultivars present high and low expression of Ole e 1, respectively. These protein levels correlated with similarly different levels of transcripts, as determined by RT-PCR. Two-dimensional protein profiles also showed conspicuous differences in the distribution and the level of expression of those spots reacting to an anti-Ole e 1 antibody. Bioinformatic analysis of four Ole e 1 sequences corresponding to 'Rowghani' and two sequences for 'Zard', showed numerous heterogeneities when compared with those Ole e 1 and Ole e 1-like sequences present in databases. Nucleotide substitutions resulted in many cases in changes over the predicted amino acid sequences. A cladistic analysis of the sequences showed Iranian entries in a central position between West-European sequences, and Ole e 1-like sequences from other Oleaceae species. Moreover, amino acid changes affected key epitopes of the protein involved in the recognition of the protein by the human immune system. Putative implications of polymorphism in both the biological role and the allergic reactivity of Ole e 1 are discussed.


Subject(s)
Allergens/genetics , Antigens, Plant/genetics , Gene Expression Regulation, Plant , Olea/genetics , Plant Proteins/genetics , Pollen/genetics , Polymorphism, Genetic , Allergens/classification , Allergens/immunology , Amino Acid Sequence , Antibodies/chemistry , Antigens, Plant/classification , Antigens, Plant/immunology , Base Sequence , Blotting, Western , Humans , Iran , Molecular Sequence Data , Olea/classification , Olea/immunology , Phylogeny , Plant Extracts/chemistry , Plant Proteins/classification , Plant Proteins/immunology , Pollen/classification , Pollen/immunology , RNA, Messenger/genetics , RNA, Messenger/immunology , Sequence Alignment , Sequence Analysis, DNA
5.
Actas dermo-sifiliogr. (Ed. impr.) ; 103(6): 456-477, jul.-ago. 2012. tab, ilus
Article in English | IBECS | ID: ibc-101203

ABSTRACT

La dermatitis alérgica por contacto debida a plantas es común. Se pueden encontrar plantas y productos vegetales potencialmente alergénicos en muchos entornos habituales como el hogar, el jardín, el lugar de trabajo y ambientes recreativos. Mejorando nuestro conocimiento de los compuestos químicos alergénicos derivados de plantas estaremos en una mejor posición para identificar alérgenos nuevos. Revisamos los alérgenos químicos que contribuyen de manera más relevante a la dermatitis alérgica por contacto por plantas y proponemos un sistema de clasificación clínica basado en 5 principales familias de sensibilizadores químicos: alfa−metilen-epsilon-butirolactonas, quinonas, derivados fenólicos, terpenos y estructuras misceláneas (disulfuros, isotiocianatos y derivados poliacetilénicos). Describimos también los diferentes cuadros clínicos de dermatitis alérgica por contacto por plantas y revisamos los materiales de pruebas epicutáneas actualmente disponibles. Un mejor entendimiento de los alérgenos específicos involucrados en la dermatitis alérgica por contacto por plantas ayudará a predecir reacciones cruzadas entre diferentes especies o familias de plantas (AU)


Allergic contact dermatitis due to plants is common. Potentially allergenic plants and plant products are found in many everyday environments, such as the home, the garden, the workplace, and recreational settings. By improving our knowledge of allergenic plant-derived chemical compounds, we will be better positioned to identify novel allergens. We review the most relevant chemical allergens that contribute to plant allergic contact dermatitis and propose a clinical classification system based on 5 major families of chemical sensitizers: alpha-methylene-epsilon-butyrolactones, quinones, phenol derivatives, terpenes, and miscellaneous structures (disulfides, isothiocyanates, and polyacetylenic derivates). We also describe the different clinical pictures of plant allergic contact dermatitis and review currently available patch test materials. A better understanding of the specific allergens involved in plant allergic contact dermatitis will help to predict cross-reactivity between different plant species or families (AU)


Subject(s)
Humans , Dermatitis, Allergic Contact/diagnosis , Plants/adverse effects , Antigens, Plant/classification , Antigens, Plant/isolation & purification , Acyl-Butyrolactones/adverse effects , Quinones/adverse effects , Terpenes/adverse effects , Phenols/adverse effects
6.
PLoS One ; 7(7): e39785, 2012.
Article in English | MEDLINE | ID: mdl-22768312

ABSTRACT

BACKGROUND: In vitro component-resolved diagnosis of food allergy requires purified allergens that have to meet high standards of quality. These include the authentication of their conformation, which is relevant for the recognition by specific IgE antibodies from allergic patients. Therefore, highly sensitive and reliable screening methods for the analysis of proteins/allergens are required to assess their structural integrity. In the present study one-dimensional 1H Nuclear Magnetic Resonance (1D 1H-NMR) analysis was adopted for the assessment of overall structural and dynamic properties and authentication of a set of relevant food allergens, including non-specific lipid transfer proteins from apple, peach and hazelnut, 7/8S seed storage globulins from hazelnut and peanut, 11S seed storage globulins from hazelnut and peanut, caseins from cows' and goats' milk and tropomyosin from shrimp. METHODOLOGY/PRINCIPAL FINDINGS: Two sets of 1D 1H-NMR experiments, using 700 MHz and 600 MHz instruments at 298 K were carried out to determine the presence and the extent of tertiary structure. Structural similarity among members of the individual allergen families was also assessed and changes under thermal stress investigated. The nuclear magnetic resonance (NMR) results were compared with structural information available either from the literature, Protein Data Bank entries, or derived from molecular models. CONCLUSIONS/SIGNIFICANCE: 1D (1)H-NMR analysis of food allergens allowed their classification into molecules with rigid, extended and ordered tertiary structures, molecules without a rigid tertiary structure and molecules which displayed both features. Differences in thermal stability were also detected. In summary, 1D (1)H-NMR gives insights into molecular fold of proteins and offers an independent method for assessing structural properties of proteins.


Subject(s)
Allergens/chemistry , Antigens, Plant/chemistry , Carrier Proteins/chemistry , Corylus/chemistry , Malus/chemistry , Plant Proteins/chemistry , Prunus/chemistry , Allergens/classification , Allergens/immunology , Antigens, Plant/classification , Antigens, Plant/immunology , Carrier Proteins/classification , Carrier Proteins/immunology , Corylus/immunology , Food Analysis/methods , Food Hypersensitivity/immunology , Humans , Magnetic Resonance Spectroscopy , Malus/immunology , Plant Proteins/classification , Plant Proteins/immunology , Protein Structure, Tertiary , Prunus/immunology
7.
J Allergy Clin Immunol ; 127(3): 616-22.e1, 2011 Mar.
Article in English | MEDLINE | ID: mdl-21251701

ABSTRACT

BACKGROUND: Patients with birch pollen allergy often develop allergic reactions to plant foods. OBJECTIVE: To evaluate the prevalence, main symptoms, and triggers of birch pollen-related food allergy and the role of food-specific IgG(4) antibodies in food tolerance. METHODS: Food-induced symptoms were evaluated in 225 individuals with birch pollen allergy by using a standardized questionnaire. IgE and IgG(4) levels specific for the major birch pollen allergen Bet v 1 and birch profilin Bet v 2 and the Bet v 1 homologs in apple (Mal d 1) and hazelnut (Cor a 1) were quantified by ImmunoCAP. Mock-treated and IgG-depleted sera from patients tolerating hazelnuts in food challenges were compared for their inhibitory activity for binding of Cor a 1-IgE complexes to B cells. RESULTS: In total, 73% of the study population experienced food allergy, which was perennial in 86% of the affected individuals. The oral allergy syndrome was the main clinical manifestation. However, more than 58% of the patients also experienced food-induced rhinoconjunctivitis. Apples and hazelnuts were identified as the most frequent triggers. Food allergy correlated with IgE reactivity to Bet v 1 but not to Bet v 2. Mal d 1-specific and Cor a 1-specific IgG(4)/IgE ratios were significantly higher in food-tolerant individuals than individuals with food allergy. Sera from IgG(4)-positive food-tolerant patients possessed IgG-dependent IgE-inhibitory activity. CONCLUSION: Birch pollen-related food allergy is highly prevalent and often perennial. High food allergen-specific IgG(4)/IgE ratios seem associated with food tolerance, potentially because specific IgG(4) blocks IgE binding to food allergens. Thus, the presence of food allergen-specific IgG(4) antibodies is no diagnostic marker for birch pollen-related food allergy.


Subject(s)
Antigens, Plant/immunology , Betula/immunology , Food Hypersensitivity/immunology , Immunoglobulin E/immunology , Immunoglobulin G/immunology , Pollen/immunology , Adolescent , Adult , Aged , Antigens, Plant/classification , Child , Female , Humans , Immunoglobulin E/blood , Immunoglobulin G/blood , Male , Middle Aged , Surveys and Questionnaires
8.
J Exp Bot ; 61(15): 4277-90, 2010 Oct.
Article in English | MEDLINE | ID: mdl-20667964

ABSTRACT

Lily stigma/style cysteine-rich adhesin (SCA), a plant lipid transfer protein (LTP) which is secreted into the extracellular matrix, functions in pollen tube guidance in fertilization. A gain-of-function mutant (ltp5-1) for Arabidopsis LTP5, an SCA-like molecule, was recently shown to display defects in sexual reproduction. In the current study, it is reported that ltp5-1 plants have dwarfed primary shoots, delayed hypocotyl elongation, various abnormal tissue fusions, and display multibranching. These mutant phenotypes in vegetative growth are recessive. No abnormality was found in ltp5-1/+ plants. In a phylogenetic analysis of plant LTPs, SCA-like Arabidopsis LTPs were classified with conventional plant LTPs. Homology modelling-based electrostatic similarity index (ESI) clustering was used to show diversity in spatial distributions of electrostatic potentials of SCA-like LTPs, suggestive of their various roles in interaction in the extracellular matrix space. ß-Glucuronidase (GUS) analysis showed that SCA-like Arabidopsis LTP genes are diversely present in various tissues. LTP4 was found specifically in the guard cells and LTP6 in trichomes as well as in other tissues. LTP1 levels were specifically abundant in the stigma, and both LTP3 and LTP6 in the ovules. LTP2 and LTP4 gene levels were up-regulated in whole seedlings with 20% polyethylene glycol (PEG) and 300 mM NaCl treatments, respectively. LTP5 was up-regulated in the hypocotyl with 3 d dark growth conditions. LTP6 was specifically expressed in the tip of the cotyledon under drought stress conditions. The results suggest that SCA-like Arabidopsis LTPs are multifunctional, with diversified roles in plant growth and reproduction.


Subject(s)
Antigens, Plant/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/growth & development , Arabidopsis/metabolism , Carrier Proteins/metabolism , Cysteine/metabolism , Flowers/metabolism , Plant Proteins/metabolism , Antigens, Plant/chemistry , Antigens, Plant/classification , Antigens, Plant/genetics , Arabidopsis/cytology , Arabidopsis/genetics , Arabidopsis Proteins/chemistry , Arabidopsis Proteins/classification , Arabidopsis Proteins/genetics , Carrier Proteins/chemistry , Carrier Proteins/classification , Carrier Proteins/genetics , Cluster Analysis , Flowers/cytology , Flowers/genetics , Gene Expression Regulation, Plant , Genes, Plant/genetics , Mutation/genetics , Phylogeny , Plant Proteins/chemistry , Plant Proteins/classification , Plant Proteins/genetics , Reproduction/genetics , Seedlings/growth & development , Seedlings/metabolism , Stress, Physiological/genetics , Structural Homology, Protein
9.
Ann Allergy Asthma Immunol ; 104(3): 223-35, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20377112

ABSTRACT

BACKGROUND: Local aeroallergen surveys identify and establish patterns of prevalence for tree, grass, and weed species that enable the clinician to more effectively select allergens for skin testing and therapy. OBJECTIVES: To determine peak pollination periods, atmospheric concentrations, and year-to-year variation for identified tree, weed, and grass aeroallergens and examine the influence of selected meteorological parameters. METHODS: Atmospheric sampling for pollen aeroallergens was performed using a volumetric rotating-arm impaction sampler. The Spearman correlation coefficient was used to determine the relationship between daily counts and selected meteorological parameters. RESULTS: Previous findings for area trees, conducted at a different location, are corroborated. Predominant pollen types include Quercus, Cupressaceae, Pinaceae, Morus, Betulaceae, Acer, Platanus, Fraxinus, Poaceae, and Ambrosia. Early flowering weeds (Rumex and Typha) and Poaceae overlap with peak tree season in April. Biphasic seasons are noted for Poaceae and Ulmus. Tree pollen accounts for 91.2%, weeds 3.8%, and grasses 3.2% of total annual pollen yield. Variation in overall pollen production is evident from year to year. High production years for some species are low for others. Cyclic pollinating patterns for Alnus, Betulaceae, and Fagus were observed. Grass and weed pollen correlated positively with maximum temperature and dew point; however, the results for individual tree species were variable. CONCLUSION: The Washington, DC, metropolitan area is host to a variety of tree, weed, and grass species that produce copious amounts of pollen. Further investigation into year-to-year variation with respect to inherent cycling and meteorological influences is warranted.


Subject(s)
Air Pollutants/analysis , Antigens, Plant/analysis , Environmental Monitoring/statistics & numerical data , Pollen/immunology , Seasons , Air Pollutants/classification , Antigens, Plant/classification , District of Columbia , Humans , Poaceae/classification , Poaceae/immunology , Trees/classification , Trees/immunology , Weather
10.
Mol Nutr Food Res ; 54(1): 93-112, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19960453

ABSTRACT

Allergy to plant-derived foods is a highly complex disorder with clinical manifestations ranging from mild oral, gastrointestinal, and cutaneous symptoms to life-threatening systemic conditions. This heterogeneity in clinical manifestations has been attributed to different properties of allergenic molecules. Based on this fact, symptom elicitors were grouped into class I and pollinosis-associated class II food allergens, but clear distinction is rather ambiguous. Moreover, mechanisms underlying food sensitization are not fully understood yet, and food allergy management most often relies on patient's compliance to avoid suspected foods. Therefore, recent efforts aim at the investigation of plant food allergies at the molecular level. This review provides an overview on currently available techniques for allergen characterization and discusses their application for investigation of plant food allergens. Data obtained by an array of physicochemical analyses, such as allergen structure, integrity, aggregation, and stability, need to be linked to results from immunological methods at the level of IgE and T-cell reactivity. Such knowledge allows the development of computational algorithms to predict allergenicity of novel foods being introduced by biotechnological industry. Furthermore, molecular characterization is an indispensable tool for molecule-based diagnosis and future development of safer patient-tailored specific immunotherapy in plant food allergy.


Subject(s)
Antigens, Plant/chemistry , Antigens, Plant/immunology , Chemistry Techniques, Analytical , Immunologic Techniques , Plants, Edible/chemistry , Plants, Edible/immunology , Algorithms , Animals , Antigens, Plant/classification , Biochemical Phenomena , Chemical Phenomena , Food Hypersensitivity/immunology , Humans , Rhinitis, Allergic, Seasonal/immunology
11.
Anal Bioanal Chem ; 396(1): 483-93, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19834694

ABSTRACT

Single and duplex real-time polymerase chain reaction (PCR) systems have been developed to quantify specific mRNA transcription of genes coding for the major Daucus carota allergen isoforms Dau c 1.01 and Dau c 1.02. Methods were tested with samples from the local market. Whereas the gene transcription levels for Dau c 1.01 were consistently high in all investigated samples, significant differences for the Dau c 1.02 transcription could be demonstrated in randomly collected market samples. The gene transcription level for the minor Dau c 1.02 variant is about one log below Dau c 1.01. Both formats, single or duplex real-time methods, exhibit ideal cycle threshold (CT) ranges and good reproducibility. In particular, the easily performed duplex real-time PCR system is potentially suited for the selection of hypoallergenic varieties and studying the impact of post-harvesting or environmental conditions.


Subject(s)
Antigens, Plant/genetics , Daucus carota/chemistry , Gene Expression Profiling/methods , Antigens, Plant/chemistry , Antigens, Plant/classification , Base Sequence , Genetic Variation , Molecular Sequence Data , Reverse Transcriptase Polymerase Chain Reaction , Sequence Alignment , Transcription, Genetic
12.
Int Arch Allergy Immunol ; 148(1): 1-17, 2009.
Article in English | MEDLINE | ID: mdl-18698143

ABSTRACT

Among other legal regulations, the Note for Guidance on Allergen Products CPMP/BWP/243/96 released by the European Medicines Agency provides regulatory instructions regarding the quality of allergen extracts for diagnostic or therapeutic purposes. The current revision of this guideline intends to transform the so-called 'principle of taxonomic families' to the 'principle of homologous groups'. According to this concept, the data of one allergen extract demonstrating stability, efficacy and safety can, to a limited extent, be extrapolated to other allergen extracts belonging to the same homologous groups. The present work proposes the formation of homologous groups for pollen species and animal-derived materials on the basis of similar biochemical composition and homology/cross-reactivity of allergens or allergen sources. Some tree pollen species could be assigned to three different homologous groups, some weed pollen species to one homologous group and numerous grass pollen species to one homologous group on condition that data rely on single defined representative species. A homologous group for mites is limited to the Dermatophagoides species and the grouping of vertebrate-derived materials such as dander could be possible under restrictions. The criteria for the formation of the proposed homologous groups are illustrated in detail to provide an opportunity for extending existing homologous groups by further species in case of new insights in allergens and cross-reactivity of allergen sources. In this way, the concept of homologous groups could serve as a dynamic tool in the regulation of allergen products.


Subject(s)
Allergens/classification , Hypersensitivity/immunology , Allergens/immunology , Allergens/therapeutic use , Animals , Antigens, Plant/classification , Antigens, Plant/immunology , Guidelines as Topic , Humans , Hypersensitivity/diagnosis , Hypersensitivity/drug therapy , Pollen/immunology , Pyroglyphidae/immunology , Venoms/immunology
13.
Int J Biol Macromol ; 42(2): 185-90, 2008 Mar 01.
Article in English | MEDLINE | ID: mdl-18249057

ABSTRACT

Hev b 4 is a heavily glycosylated latex allergen with seven attached N-glycans, comprising of both oligomannose and complex type structures. Treatment with a mixture of N-glycosidase A and N-glycosidase F resulted in lowering Hev b 4 protein on SDS-gel from 53 to 55kDa to circa 40kDa, this being comparable to the 38.53kDa mass predicted by its cDNA. In Western-immunoblots, the enzymatically deglycosylated Hev b 4 showed negligible binding to IgE from latex allergic patients; the results indicated that IgE essentially binds to Hev b 4 via its N-glycan moiety. Structural modelling of the Hev b 4 was carried out based on the template protein and carbohydrate crystal coordinates of rhamnogalacturonan acetylesterase (PDB ID 1DEO). We managed to link four N-glycan structures on to the Hev b 4 model; the glycans were scattered over the surface of the model. The structural and functional features of Hev b 4 could prove useful to elucidate its exposed epitopes which are important for IgE binding.


Subject(s)
Allergens/chemistry , Allergens/immunology , Antigens, Plant/chemistry , Antigens, Plant/immunology , Computational Biology , Latex/chemistry , Latex/immunology , Phospholipases/chemistry , Phospholipases/immunology , Allergens/classification , Antigens, Plant/classification , Evolution, Molecular , Glycosylation , Immunoglobulins/immunology , Models, Molecular , Phospholipases/classification , Protein Structure, Secondary , Protein Structure, Tertiary , Solvents
14.
Clin Exp Allergy ; 37(9): 1340-8, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17845415

ABSTRACT

BACKGROUND: Actinidin has previously been reported as the major allergen in kiwifruit. Objectives To investigate the relevance of actinidin in a well-characterized population of UK patients with kiwifruit allergy. METHODS: To identify the allergens in kiwifruit, using Western blots, we examined the IgE-binding patterns of 76 patients with a history of kiwifruit allergy, 23 of who had had a positive double-blind, placebo-controlled food challenge. In addition, IgE binding to purified native actinidin was studied in 30 patients, and to acidic and basic isoforms of recombinant actinidin in five patients. Inhibition of IgE binding to kiwifruit protein extract by purified native actinidin was investigated by both inhibition immunoblots and inhibition ELISAs using pooled sera. RESULTS: Twelve protein bands in kiwifruit protein extract were bound by IgE. A protein band with a molecular weight of 38 kDa was the major allergen recognized by 59% of the population. IgE did not bind to actinidin in the kiwifruit protein extract, or to purified native or recombinant forms of actinidin during Western blotting. Pooled sera bound to kiwifruit protein extract but not purified actinidin on ELISA, and pre-incubating sera with actinidin did not inhibit IgE binding to kiwifruit protein extract on immunoblot or ELISA. CONCLUSION: A novel 38 kDa protein, not actinidin, is the major allergen in this large study population. Identification of major allergens in one patient group is therefore not necessarily reproducible in another; therefore, major allergens should not be defined until there is a sufficient body of data from diverse geographical and cultural populations.


Subject(s)
Actinidia/immunology , Antigens, Plant/classification , Antigens, Plant/immunology , Cysteine Endopeptidases/immunology , Hypersensitivity/diagnosis , Adolescent , Adult , Blotting, Western , Child , Child, Preschool , Enzyme-Linked Immunosorbent Assay , Female , Fruit/immunology , Humans , Hypersensitivity/immunology , Immunoglobulin E/blood , Male , Middle Aged , Skin Tests , United Kingdom/epidemiology
15.
J Allergy Clin Immunol ; 120(3): 518-25, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17689599

ABSTRACT

The majority of plant food allergens can be grouped into just 4 protein families. This review summarizes the evolutionary relationships of allergenic and nonallergenic members of these families. Proteins from the prolamin superfamily have been described in vascular plants. This superfamily contains several allergenic (2S albumins, nonspecific lipid transfer proteins, and cereal amylase and protease inhibitors) and nonallergenic (hybrid proline-rich proteins, cereal indolines, and alpha-globulins) member families. The cupin superfamily comprises numerous functionally highly diverse protein families from all groups of organisms. However, allergenicity within the cupins is confined to the vicilin and legumin seed storage proteins. Profilins are ubiquitous eukaryotic proteins that are nonallergenic, with the exception of profilins from flowering plants. Finally, the Bet v 1 superfamily contains the pathogenesis-related proteins 10 family, the family of major latex proteins and ripening-related proteins, the norcoclaurine synthases, and the cytokinin-binding proteins, with pathogenesis-related proteins 10 family members from certain taxa being the only allergenic members. The study of the distribution of allergenic and nonallergenic members of protein families will provide new insights into the evolution of allergenicity and the factors that make proteins allergenic.


Subject(s)
Antigens, Plant/classification , Biological Evolution , Food Hypersensitivity/immunology , Plant Proteins/immunology , Plants, Edible/immunology , Allergens/classification , Allergens/immunology , Animals , Antigens, Plant/immunology , Humans , Phylogeny , Plant Proteins/chemistry , Plants, Edible/chemistry
16.
Plant Physiol ; 143(3): 1269-81, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17220362

ABSTRACT

The dominant allergenic components of grass pollen are known by immunologists as group 1 allergens. These constitute a set of closely related proteins from the beta-expansin family and have been shown to have cell wall-loosening activity. Group 1 allergens may facilitate the penetration of pollen tubes through the grass stigma and style. In maize (Zea mays), group 1 allergens are divided into two classes, A and B. We have identified 15 genes encoding group 1 allergens in maize, 11 genes in class A and four genes in class B, as well as seven pseudogenes. The genes in class A can be divided by sequence relatedness into two complexes, whereas the genes in class B constitute a single complex. Most of the genes identified are represented in pollen-specific expressed sequence tag libraries and are under purifying selection, despite the presence of multiple copies that are nearly identical. Group 1 allergen genes are clustered in at least six different genomic locations. The single class B location and one of the class A locations show synteny with the rice (Oryza sativa) regions where orthologous genes are found. Both classes are expressed at high levels in mature pollen but at low levels in immature flowers. The set of genes encoding maize group 1 allergens is more complex than originally anticipated. If this situation is common in grasses, it may account for the large number of protein variants, or group 1 isoallergens, identified previously in turf grass pollen by immunologists.


Subject(s)
Antigens, Plant/genetics , Gene Duplication , Genome, Plant , Plant Proteins/genetics , Pollen/genetics , Translocation, Genetic , Zea mays/genetics , Antigens, Plant/chemistry , Antigens, Plant/classification , Base Sequence , Chromosome Mapping , Consensus Sequence , Molecular Sequence Data , Multigene Family , Phylogeny , Plant Proteins/chemistry , Plant Proteins/classification , Promoter Regions, Genetic , Sequence Alignment , Zea mays/metabolism
17.
J Exp Bot ; 58(3): 593-614, 2007.
Article in English | MEDLINE | ID: mdl-17220514

ABSTRACT

The apical shoot drives the yearly new stem growth of conifer trees, is the primary site for the establishment of chemical and physical defences, and is important in establishing subsequent perennial growth. This organ presents an interesting developmental system, with growth and development progressing from a meristematic tip through development of a primary vascular system, to a base with fully differentiated and lignified secondary xylem on the inside and bark tissue with constitutive defence structures such as resin, polyphenolic phloem parenchyma cells, and sclereids on the outside. A spruce (Picea spp.) microarray containing approximately 16.7K unique cDNAs was used to study transcript profiles that characterize the developmental transition in apical shoots of Sitka spruce (Picea sitchensis) from their vegetative tips to their woody bases. Along with genes involved in cell-wall modification and lignin biosynthesis, a number of differentially regulated genes encoding protein kinases and transcription factors with base-preferred expression patterns were identified, which could play roles in the formation of woody tissues inside the apical shoot, as well as in regulating other developmental transitions associated with organ maturation. Preferential expression of known conifer defence genes, genes encoding defence-related proteins, and genes encoding regulatory proteins was observed at the apical shoot tip and in the green bark tissues at the apical shoot base, suggesting a commitment to constitutive defence in the apical shoot that is co-ordinated with rapid development of secondary xylem.


Subject(s)
Picea/growth & development , Picea/genetics , Plant Proteins/genetics , Antigens, Plant/classification , Antigens, Plant/genetics , Antigens, Plant/metabolism , Carbohydrate Metabolism , Carrier Proteins/classification , Carrier Proteins/genetics , Carrier Proteins/metabolism , Cell Wall/metabolism , Gene Expression Profiling , Lignin/biosynthesis , Likelihood Functions , Oligonucleotide Array Sequence Analysis , Phylogeny , Picea/anatomy & histology , Plant Proteins/classification , Plant Proteins/metabolism , Plant Shoots/anatomy & histology , Plant Shoots/genetics , Plant Shoots/growth & development , Plant Stems/anatomy & histology , Plant Stems/genetics , Plant Stems/growth & development , Reverse Transcriptase Polymerase Chain Reaction , Transcription Factors/genetics , Transcription Factors/metabolism , Xylem/anatomy & histology , Xylem/genetics , Xylem/growth & development
18.
Acta Histochem ; 108(5): 395-400, 2006.
Article in English | MEDLINE | ID: mdl-16963110

ABSTRACT

The pollen surface consists of an outermost coat and an underlying wall. It makes the initial contact with the stigma surface during sexual reproduction. To date, only two proteins have been identified from the maize pollen coat. Zea m 1 (beta-expansin 1) is the major group-1 allergen in maize pollen, but its presence and localization in the pollen coat and wall has not yet been explored. In the present study, immunoblot analysis using an antibody directed against group-1 allergen revealed that a small amount of Zea m 1 exists in the pollen coat fraction prepared using a diethyl ether wash. Immunogold labeling also showed that the extracellular localization of Zea m 1 was mainly restricted to the tectum and the foot layer of the exine (the outer pollen wall), and gold particles immunolabelling Zea m 1 were unevenly dispersed throughout the pollen coat and wall. Moreover, a substantial amount of Zea m 1 was localized in the cytoplasm of the pollen interior. The presence of Zea m 1 in the pollen coat and wall suggests that Zea m 1 may play a potential role in pollen germination on the stigma.


Subject(s)
Antigens, Plant/analysis , Pollen/cytology , Pollen/metabolism , Zea mays/chemistry , Zea mays/cytology , Antigens, Plant/classification , Antigens, Plant/metabolism , Microscopy, Electron, Transmission , Molecular Sequence Data , Pollen/ultrastructure , Zea mays/ultrastructure
19.
Article in English | MEDLINE | ID: mdl-16599247

ABSTRACT

BACKGROUND: The objective of the present work was to compare pollen counts at three different urban locations within a city to each other and to the counts from a fixed trap. This information could be useful to delimit zones in the urbanized part of the city according to the risk of allergic affections. METHODS: Aerobiological sampling using portable traps was carried out at three points in urban zones of the city of Badajoz (SW Spain) over one year at the same time as continuous sampling using a fixed trap at a point in the nonurban outskirts of the city. The sources of airborne pollen were studied by counting the trees in the streets and squares of the selected zones. A statistical analysis was performed of the differences between the portable and fixed traps and of the temporal and spatial variation in the city as a function of the distribution of the most important pollen sources. RESULTS: Forty-eight pollen types were identified with the fixed trap, and 28 with the portable traps. The grass, olive, and oak pollens come from almost exclusively external sources, there being no spatial differences in their concentrations in the city. Cypress pollen concentrations were much higher at the urban locations than at the fixed trap site. Plane tree pollen levels could be locally very high, reflecting the proximity of the source. Except for ornamental plants, pollen levels were lower at the urban locations than at the site on the outskirts of the city. CONCLUSIONS: (1) Using portable traps at different urban zones in a city could provide information about the spatial variation of atmospheric pollen levels. (2) A knowledge of the often widely variable distribution of ornamental plants with potentially allergenic pollen could be useful in indicating city zones with a greater or lesser incidence of potential pollinosis.


Subject(s)
Air Pollutants/isolation & purification , Antigens, Plant/isolation & purification , Pollen , Air Pollutants/classification , Antigens, Plant/classification , Cupressaceae , Humans , Magnoliopsida , Olea , Poaceae , Quercus , Urban Health
20.
Mol Nutr Food Res ; 50(1): 18-23, 2006 Jan.
Article in English | MEDLINE | ID: mdl-16288502

ABSTRACT

The clinical presentation of non-pollen related allergy to hazelnut can be severe and systemic. So far, only a limited number of non-pollen related hazelnut allergens have been identified and characterized. The aim of this study was to identify and clone new hazelnut allergens. A lambda ZAP cDNA library of hazelnut was constructed. The library was screened with serum of six hazelnut allergic patients displaying different IgE-binding patterns on hazelnut immunoblot. Rapid amplification of cDNA ends (RACE) protocols were applied to obtain full-length clones. Expression experiments were carried out in Eschericchia coli. Expression was monitored by SDS-PAGE, protein staining and immunoblotting. A hazelnut cDNA library was constructed. IgE screening resulted in the cloning of two isoforms of a novel putative hazelnut allergen. The clones were identified as oleosins, with theoretical molecular masses of 16.7 and 14.7 kDa and pI of 10.5 and 10.0, respectively. The isoforms demonstrated only 37% amino acid sequence identity but contained the typical hydrophobic stretch in the middle of the protein (53% identity) with the characteristic oleosin proline knot region (11/12 amino acids identical). Expression in E. coli of the longer isoform resulted in a clear band on SDS-PAGE. The expressed protein was recognized on an immunodot blot by IgE from serum that was used for screening the cDNA library. Hazelnut contains multiple isoforms of oleosin. IgE binding of a hazelnut-allergic patient to a recombinant version suggest that hazelnut oleosin is an allergen, as has been described for peanut and sesame.


Subject(s)
Antigens, Plant/genetics , Corylus/immunology , DNA, Complementary/genetics , Gene Library , Amino Acid Sequence , Antigens, Plant/classification , Antigens, Plant/immunology , Corylus/chemistry , DNA, Plant/genetics , Escherichia coli/genetics , Food Hypersensitivity/immunology , Gene Expression , Humans , Immunoblotting , Immunoglobulin E/immunology , Molecular Sequence Data , Protein Isoforms/chemistry , Protein Isoforms/genetics , Protein Isoforms/immunology , Racial Groups , Sequence Alignment
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