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1.
PLoS Pathog ; 15(9): e1008085, 2019 09.
Article in English | MEDLINE | ID: mdl-31568486

ABSTRACT

Human parasitic nematodes are the causative agents of lymphatic filariasis (elephantiasis) and onchocerciasis (river blindness), diseases that are endemic to more than 80 countries and that consistently rank in the top ten for the highest number of years lived with disability. These filarial nematodes have evolved an obligate mutualistic association with an intracellular bacterium, Wolbachia, a symbiont that is essential for the successful development, reproduction, and survival of adult filarial worms. Elimination of the bacteria causes adult worms to die, making Wolbachia a primary target for developing new interventional tools to combat filariases. To further explore Wolbachia as a promising indirect macrofilaricidal drug target, the essential cellular processes that define the symbiotic Wolbachia-host interactions need to be identified. Genomic analyses revealed that while filarial nematodes encode all the enzymes necessary for glycolysis, Wolbachia does not encode the genes for three glycolytic enzymes: hexokinase, 6-phosphofructokinase, and pyruvate kinase. These enzymes are necessary for converting glucose into pyruvate. Wolbachia, however, has the full complement of genes required for gluconeogenesis starting with pyruvate, and for energy metabolism via the tricarboxylic acid cycle. Therefore, we hypothesized that Wolbachia might depend on host glycolysis to maintain a mutualistic association with their parasitic host. We did conditional experiments in vitro that confirmed that glycolysis and its end-product, pyruvate, sustain this symbiotic relationship. Analysis of alternative sources of pyruvate within the worm indicated that the filarial lactate dehydrogenase could also regulate the local intracellular concentration of pyruvate in proximity to Wolbachia and thus help control bacterial growth via molecular interactions with the bacteria. Lastly, we have shown that the parasite's pyruvate kinase, the enzyme that performs the last step in glycolysis, could be a potential novel anti-filarial drug target. Establishing that glycolysis is an essential component of symbiosis in filarial worms could have a broader impact on research focused on other intracellular bacteria-host interactions where the role of glycolysis in supporting intracellular survival of bacteria has been reported.


Subject(s)
Brugia/metabolism , Brugia/microbiology , Pyruvic Acid/metabolism , Wolbachia/metabolism , Animals , Brugia/genetics , Brugia malayi/genetics , Brugia malayi/metabolism , Brugia malayi/microbiology , Brugia pahangi/genetics , Brugia pahangi/metabolism , Brugia pahangi/microbiology , Female , Filariasis/metabolism , Filariasis/microbiology , Filariasis/parasitology , Genes, Helminth , Glycolysis , Host Microbial Interactions , Host-Parasite Interactions , Humans , Male , Symbiosis , Wolbachia/genetics
2.
PLoS Negl Trop Dis ; 11(12): e0006093, 2017 12.
Article in English | MEDLINE | ID: mdl-29261659

ABSTRACT

Matrix Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) is an emerging tool for routine identification of bacteria, archaea and fungi. It has also been recently applied as an accurate approach for arthropod identification. Preliminary studies have shown that the MALDI-TOF MS was able to differentiate whether ticks and mosquitoes were infected or not with some bacteria and Plasmodium parasites, respectively. The aim of the present study was to test the efficiency of MALDI-TOF MS tool in distinguishing protein profiles between uninfected mosquitoes from specimens infected by filarioid helminths. Aedes aegypti mosquitoes were engorged on microfilaremic blood infected with Dirofilaria immitis, Brugia malayi or Brugia pahangi. Fifteen days post-infective blood feeding, a total of 534 mosquitoes were killed by freezing. To assess mass spectra (MS) profile changes following filariae infections, one compartment (legs, thorax, head or thorax and head) per mosquito was submitted for MALDI-TOF MS analysis; the remaining body parts were used to establish filariae infectious status by real-time qPCR. A database of reference MS, based on the mass profiles of at least two individual mosquitoes per compartment, was created. Subsequently, the remaining compartment spectra (N = 350) from Ae. aegypti infected or not infected by filariae were blind tested against the spectral database. In total, 37 discriminating peak masses ranging from 2062 to 14869 daltons were identified, of which 17, 11, 12 and 7 peak masses were for legs, thorax, thorax-head and head respectively. Two peak masses (4073 and 8847 Da) were specific to spectra from Ae. aegypti infected with filariae, regardless of nematode species or mosquito compartment. The thorax-head part provided better classification with a specificity of 94.1% and sensitivity of 86.6, 71.4 and 68.7% of D. immitis, B. malayi and B. pahangi respectively. This study presents the potential of MALDI-TOF MS as a reliable tool for differentiating non-infected and filariae-infected Ae. aegypti mosquitoes. Considering that the results might vary in other mosquito species, further studies are needed to consolidate the obtained preliminary results before applying this tool in entomological surveillance as a fast mass screening method of filariosis vectors in endemic areas.


Subject(s)
Aedes/parasitology , Filariasis/parasitology , Filarioidea/isolation & purification , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Aedes/metabolism , Animals , Brugia malayi/genetics , Brugia malayi/isolation & purification , Brugia pahangi/genetics , Brugia pahangi/isolation & purification , Dirofilaria immitis/genetics , Dirofilaria immitis/isolation & purification , Female , Filarioidea/genetics , Insect Proteins/analysis , Sensitivity and Specificity
3.
Parasit Vectors ; 8: 451, 2015 Sep 08.
Article in English | MEDLINE | ID: mdl-26350613

ABSTRACT

BACKGROUND: Efforts to completely eradicate lymphatic filariasis from human population may be challenged by the emergence of Brugia pahangi as another zoonotic lymphatic filarial nematode. In this report, a genomic study was conducted to understand this species at molecular level. METHODS: After blood meal on a B. pahangi-harbouring cat, the Aedes togoi mosquitoes were maintained to harvest infective third stage larvae, which were then injected into male Mongolian gerbils. Subsequently, adult B. pahangi were obtained from the infected gerbil for genomic DNA extraction. Sequencing and subsequently, construction of genomic libraries were performed. This was followed by genomic analyses and gene annotation analysis. By using archived protein sequences of B. malayi and a few other nematodes, clustering of gene orthologs and phylogenetics were conducted. RESULTS: A total of 9687 coding genes were predicted. The genome of B. pahangi shared high similarity to that B. malayi genome, particularly genes annotated to fundamental processes. Nevertheless, 166 genes were considered to be unique to B. pahangi, which may be responsible for the distinct properties of B. pahangi as compared to other filarial nematodes. In addition, 803 genes were deduced to be derived from Wolbachia, an endosymbiont bacterium, with 44 of these genes intercalate into the nematode genome. CONCLUSIONS: The reporting of B. pahangi draft genome contributes to genomic archive. Albeit with high similarity to B. malayi genome, the B. pahangi-unique genes found in this study may serve as new focus to study differences in virulence, vector selection and host adaptability among different Brugia spp.


Subject(s)
Brugia pahangi/genetics , Genome, Helminth/genetics , Adenosine Triphosphatases/genetics , Adenosine Triphosphatases/metabolism , Aedes/parasitology , Animals , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Gene Expression Regulation/physiology , Helminth Proteins/genetics , Helminth Proteins/metabolism , Phylogeny , Wolbachia/genetics , Wolbachia/isolation & purification
4.
Vector Borne Zoonotic Dis ; 15(8): 473-80, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26273808

ABSTRACT

BACKGROUND: Apart from infection with human filariae, zoonotic filariasis also occurs worldwide, and the numbers of cases have been increasing steadily. Diagnosis of intact filariae in tissues or organs depends on histological identification. The morphology of parasites in tissue-embedded sections is poor and shows high levels of homoplasy. Thus, the use of morphological characteristics in taxonomic studies is difficult and may not allow a specific diagnosis. METHODS: Here we report the use of real-time PCR with high-resolution melting analysis (HRM) to detect and identify Brugia malayi, Brugia pahangi, Wuchereria bancrofti, and Dirofilaria immitis in paraffin-embedded sections. Assay specificity was determined using other tissue-dwelling parasites, Angiostrongylus cantonensis, Gnathostoma spinigerum, and Cysticercus cellulosae. We also developed a quick paraffin removal protocol. RESULTS: Both human and animal filariae in formalin-fixed paraffin-embedded sections (FFPES) were diagnosed and identified rapidly, whereas other parasites were negative. There was no difference in the melting temperature of products amplified from filarial DNA obtained from unstained FFPES and Hematoxylin & Eosin-stained sections. Therefore, the DNA extraction protocols developed in this study could be used for real-time PCR with HRM. CONCLUSIONS: We report the successful application of a HRM-PCR assay to differentiate four filarial parasites in FFPES, thus providing the pathologist with an effective alternative diagnostic procedure. Furthermore, the quick paraffin removal protocol developed could shorten the duration and number of steps required for paraffin removal using a standard protocol.


Subject(s)
Brugia malayi/isolation & purification , Brugia pahangi/isolation & purification , Dirofilaria immitis/isolation & purification , Filariasis/parasitology , Real-Time Polymerase Chain Reaction/methods , Wuchereria bancrofti/isolation & purification , Animals , Brugia malayi/genetics , Brugia pahangi/genetics , DNA, Helminth/isolation & purification , Dirofilaria immitis/genetics , Female , Filariasis/pathology , Humans , Paraffin Embedding , Sensitivity and Specificity , Wuchereria bancrofti/genetics , Zoonoses
5.
BMC Genomics ; 16: 331, 2015 Apr 22.
Article in English | MEDLINE | ID: mdl-25896062

ABSTRACT

BACKGROUND: Filarial nematodes are important pathogens in the tropics transmitted to humans via the bite of blood sucking arthropod vectors. The molecular mechanisms underpinning survival and differentiation of these parasites following transmission are poorly understood. microRNAs are small non-coding RNA molecules that regulate target mRNAs and we set out to investigate whether they play a role in the infection event. RESULTS: microRNAs differentially expressed during the early post-infective stages of Brugia pahangi L3 were identified by microarray analysis. One of these, bpa-miR-5364, was selected for further study as it is upregulated ~12-fold at 24 hours post-infection, is specific to clade III nematodes, and is a novel member of the let-7 family, which are known to have key developmental functions in the free-living nematode Caenorhabditis elegans. Predicted mRNA targets of bpa-miR-5364 were identified using bioinformatics and comparative genomics approaches that relied on the conservation of miR-5364 binding sites in the orthologous mRNAs of other filarial nematodes. Finally, we confirmed the interaction between bpa-miR-5364 and three of its predicted targets using a dual luciferase assay. CONCLUSIONS: These data provide new insight into the molecular mechanisms underpinning the transmission of third stage larvae of filarial nematodes from vector to mammal. This study is the first to identify parasitic nematode mRNAs that are verified targets of specific microRNAs and demonstrates that post-transcriptional control of gene expression via stage-specific expression of microRNAs may be important in the success of filarial infection.


Subject(s)
Brugia pahangi/genetics , MicroRNAs/metabolism , 3' Untranslated Regions , Animals , Base Sequence , Brugia pahangi/classification , Brugia pahangi/growth & development , Computational Biology , Female , Life Cycle Stages/genetics , Male , MicroRNAs/antagonists & inhibitors , Oligonucleotide Array Sequence Analysis , Oligonucleotides, Antisense/metabolism , Phylogeny , RNA, Messenger/antagonists & inhibitors , RNA, Messenger/metabolism , Sequence Alignment , Sequence Analysis, RNA , Transcriptome
6.
Parasitology ; 141(9): 1203-15, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24721950

ABSTRACT

Nematodes are amongst the most successful and abundant organisms on the planet with approximately 30 000 species described, although the actual number of species is estimated to be one million or more. Despite sharing a relatively simple and invariant body plan, there is considerable diversity within the phylum. Nematodes have evolved to colonize most ecological niches, and can be free-living or can parasitize plants or animals to the detriment of the host organism. In this review we consider the role of heat shock protein 90 (Hsp90) in the nematode life cycle. We describe studies on Hsp90 in the free-living nematode Caenorhabditis elegans and comparative work on the parasitic species Brugia pahangi, and consider whether a dependence upon Hsp90 can be exploited for the control of parasitic species.


Subject(s)
Brugia pahangi/metabolism , Caenorhabditis elegans/metabolism , HSP90 Heat-Shock Proteins/metabolism , Helminth Proteins/metabolism , Animals , Brugia pahangi/genetics , Caenorhabditis elegans/genetics , Conserved Sequence , Gene Expression Regulation/physiology , HSP90 Heat-Shock Proteins/genetics , Helminth Proteins/genetics
7.
Vector Borne Zoonotic Dis ; 13(1): 31-6, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23199268

ABSTRACT

Human lymphatic filariasis is caused by filarial worms such as Brugia malayi for which the major reservoir is domestic cats. However, domestic cats or dogs also carry nonhuman filaria such as Brugia pahangi and Dirofilaria immitis. We have developed a single-tube, real-time PCR with a high-resolution melting (HRM) analysis assay for detection and identification of B. malayi, B. pahangi, and D. immitis in blood samples. The designated primer pair in the PCR can amplify a 114-bp region of mitochondrial 12S rRNA genes of these filarial worms. Subsequently, the HRM assay showed a specific melting temperature for each species. The assay showed the highest sensitivity and specificity in comparison with DNA sequences after assessment with 34 cat and 14 dog blood samples. This assay could be helpful for epidemiological studies of reservoirs and vectors.


Subject(s)
Brugia malayi/isolation & purification , Brugia pahangi/isolation & purification , Dirofilaria immitis/isolation & purification , Filariasis/parasitology , Real-Time Polymerase Chain Reaction/methods , Animals , Base Sequence , Brugia malayi/classification , Brugia malayi/genetics , Brugia pahangi/genetics , Cats , DNA Primers/genetics , DNA, Mitochondrial/blood , DNA, Mitochondrial/genetics , DNA, Protozoan/blood , DNA, Protozoan/genetics , DNA, Ribosomal/blood , DNA, Ribosomal/genetics , Dirofilaria immitis/genetics , Dirofilariasis/epidemiology , Dirofilariasis/parasitology , Disease Reservoirs , Dogs , Filariasis/epidemiology , Humans , Molecular Sequence Data , Sensitivity and Specificity , Sequence Analysis, DNA , Species Specificity , Thailand/epidemiology , Transition Temperature
8.
BMC Genomics ; 13: 4, 2012 Jan 04.
Article in English | MEDLINE | ID: mdl-22216965

ABSTRACT

BACKGROUND: MicroRNAs (miRNAs) play key roles in regulating post-transcriptional gene expression and are essential for development in the free-living nematode Caenorhabditis elegans and in higher organisms. Whether microRNAs are involved in regulating developmental programs of parasitic nematodes is currently unknown. Here we describe the the miRNA repertoire of two important parasitic nematodes as an essential first step in addressing this question. RESULTS: The small RNAs from larval and adult stages of two parasitic species, Brugia pahangi and Haemonchus contortus, were identified using deep-sequencing and bioinformatic approaches. Comparative analysis to known miRNA sequences reveals that the majority of these miRNAs are novel. Some novel miRNAs are abundantly expressed and display developmental regulation, suggesting important functional roles. Despite the lack of conservation in the miRNA repertoire, genomic positioning of certain miRNAs within or close to specific coding genes is remarkably conserved across diverse species, indicating selection for these associations. Endogenous small-interfering RNAs and Piwi-interacting (pi)RNAs, which regulate gene and transposon expression, were also identified. piRNAs are expressed in adult stage H. contortus, supporting a conserved role in germline maintenance in some parasitic nematodes. CONCLUSIONS: This in-depth comparative analysis of nematode miRNAs reveals the high level of divergence across species and identifies novel sequences potentially involved in development. Expression of novel miRNAs may reflect adaptations to different environments and lifestyles. Our findings provide a detailed foundation for further study of the evolution and function of miRNAs within nematodes and for identifying potential targets for intervention.


Subject(s)
Brugia pahangi/genetics , Genetic Variation , Genome, Helminth/genetics , Haemonchus/genetics , MicroRNAs/genetics , Animals , Brugia pahangi/growth & development , Caenorhabditis elegans/genetics , Caenorhabditis elegans/growth & development , Cluster Analysis , Computational Biology , Genes, Helminth , Haemonchus/growth & development , Larva/genetics , Larva/metabolism , MicroRNAs/metabolism , RNA, Small Interfering/genetics , RNA, Small Interfering/metabolism , Sequence Analysis, RNA
9.
Biometrics ; 67(1): 225-33, 2011 Mar.
Article in English | MEDLINE | ID: mdl-20345496

ABSTRACT

We estimate the parameters of a stochastic process model for a macroparasite population within a host using approximate Bayesian computation (ABC). The immunity of the host is an unobserved model variable and only mature macroparasites at sacrifice of the host are counted. With very limited data, process rates are inferred reasonably precisely. Modeling involves a three variable Markov process for which the observed data likelihood is computationally intractable. ABC methods are particularly useful when the likelihood is analytically or computationally intractable. The ABC algorithm we present is based on sequential Monte Carlo, is adaptive in nature, and overcomes some drawbacks of previous approaches to ABC. The algorithm is validated on a test example involving simulated data from an autologistic model before being used to infer parameters of the Markov process model for experimental data. The fitted model explains the observed extra-binomial variation in terms of a zero-one immunity variable, which has a short-lived presence in the host.


Subject(s)
Bayes Theorem , Brugia pahangi/genetics , Cats/parasitology , Evolution, Molecular , Genetics, Population , Host-Parasite Interactions/genetics , Models, Genetic , Animals , Computer Simulation
10.
BMC Genomics ; 11: 225, 2010 Apr 07.
Article in English | MEDLINE | ID: mdl-20370932

ABSTRACT

BACKGROUND: Brugia malayi and B. pahangi are two closely related nematodes that cause filariasis in humans and animals. However, B. pahangi microfilariae are able to develop in and be transmitted by the mosquito, Armigeres subalbatus, whereas most B. malayi are rapidly melanized and destroyed within the mosquito hemocoel. A cross-species microarray analysis employing the B. malayi V2 array was carried out to determine the transcriptional differences between B. malayi and B. pahangi microfilariae with similar age distribution. RESULTS: Following microarray data analysis, a list of preferentially expressed genes in both microfilariae species was generated with a false discovery rate estimate of 5% and a signal intensity ratio of 2 or higher in either species. A total of 308 probes were preferentially expressed in both species with 149 probes, representing 123 genes, in B. pahangi microfilariae and 159 probes, representing 107 genes, in B. malayi microfilariae. In B. pahangi, there were 76 (62%) up-regulated transcripts that coded for known proteins that mapped into the KEGG pathway compared to 61 (57%) transcripts in B. malayi microfilariae. The remaining 47 (38%) transcripts in B. pahangi and 46 (43%) transcripts in B. malayi microfilariae were comprised almost entirely of hypothetical genes of unknown function. Twenty-seven of the transcripts in B. pahangi microfilariae coded for proteins that associate with the secretory pathway compared to thirty-nine in B. malayi microfilariae. The data obtained from real-time PCR analysis of ten genes selected from the microarray list of preferentially expressed genes showed good concordance with the microarray data, indicating that the microarray data were reproducible. CONCLUSION: In this study, we identified gene transcripts that were preferentially expressed in the microfilariae of B. pahangi and B. malayi, some of which coded for known immunomodulatory proteins. These comparative transcriptome data will be of interest to researchers keen on understanding the inherent differences, at the molecular level, between B. malayi and B. pahangi microfilariae especially because these microfilariae are capable of surviving in the same vertebrate host but elicit different immune response outcomes in the mosquito, Ar. subalbatus.


Subject(s)
Brugia malayi/genetics , Brugia pahangi/genetics , Animals , Base Sequence , Brugia malayi/immunology , Brugia malayi/metabolism , Brugia pahangi/immunology , Brugia pahangi/metabolism , Culicidae/parasitology , Gene Expression Profiling , Gerbillinae/parasitology , Microfilariae/immunology , Molecular Sequence Data , Sequence Alignment
11.
Parasitol Res ; 106(3): 621-5, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20066436

ABSTRACT

A real-time fluorescence resonance energy transfer PCR combined with melting curve analysis was developed for differentiating Brugia malayi and Brugia pahangi DNA in host blood using one set of primers and fluorophore-labeled hybridization probes specific for HhaI repetitive DNA. The differentiation of both species was based on their melting temperatures (Tm). The mean Tm +/- SD of B. malayi and B. pahangi were 56.18+/-0.21 and 52.49+/-0.07, respectively. The method was used for the molecular detection of B. pahangi in infected dog blood samples. The diagnostic sensitivity, specificity, accuracy,and positive and negative predictive values of this method were 100%. The detected mean difference of the Tm might allow the simple discrimination of two related species. This method is fast, sensitive, allows for a high throughput, can be performed on very small volumes, and has potential for diagnosis of B. pahangi-infected dogs in endemic areas as well as for large epidemiological investigations.


Subject(s)
Brugia malayi/isolation & purification , Brugia pahangi/isolation & purification , Dog Diseases/diagnosis , Filariasis/veterinary , Fluorescence Resonance Energy Transfer , Polymerase Chain Reaction/methods , Animals , Blood/parasitology , Brugia malayi/classification , Brugia malayi/genetics , Brugia pahangi/classification , Brugia pahangi/genetics , DNA Primers/genetics , Dog Diseases/parasitology , Dogs , Filariasis/diagnosis , Oligonucleotide Probes/chemistry , Oligonucleotide Probes/genetics , Predictive Value of Tests , Sensitivity and Specificity , Transition Temperature
12.
Parasitol Res ; 106(1): 227-35, 2009 Dec.
Article in English | MEDLINE | ID: mdl-19894065

ABSTRACT

Brugia malayi and Brugia pahangi microfilariae (mf) require a maturation period of at least 5 days in the mammalian host to successfully infect laboratory mosquitoes. This maturation process coincides with changes in the surface composition of mf that likely are associated with changes in gene expression. To test this hypothesis, we verified the differential infectivity of immature (< or =3 day) and mature (>30 day) Brugia mf for black-eyed Liverpool strain of Aedes aegypti and then assessed transcriptome changes associated with microfilarial maturation by competitively hybridizing microfilarial cDNAs to the B. malayi oligonucleotide microarray. We identified transcripts differentially abundant in immature (94 in B. pahangi and 29 in B. malayi) and mature (64 in B. pahangi and 14 in B. malayi) mf. In each case, >40% of Brugia transcripts shared no similarity to known genes or were similar to genes with unknown function; the remaining transcripts were categorized by putative function based on sequence similarity to known genes/proteins. Microfilarial maturation was not associated with demonstrable changes in the abundance of transmembrane or secreted proteins; however, immature mf expressed more transcripts associated with immune modulation, neurotransmission, transcription, and cellular cytoskeleton elements, while mature mf displayed increased transcripts potentially encoding hypodermal/muscle and surface molecules, e.g., cuticular collagens and sheath components. The results of the homologous B. malayi microarray hybridization were validated by quantitative reverse transcriptase polymerase chain reaction. These findings preliminarily lend support to the underlying hypothesis that changes in microfilarial gene expression drive maturation-associated changes that influence the parasite to develop in compatible vectors.


Subject(s)
Brugia malayi/growth & development , Brugia malayi/pathogenicity , Brugia pahangi/growth & development , Brugia pahangi/pathogenicity , Culicidae/parasitology , Oligonucleotide Array Sequence Analysis , Animals , Brugia malayi/genetics , Brugia pahangi/genetics , Gene Expression Regulation, Developmental , Life Cycle Stages
13.
J Med Assoc Thai ; 92 Suppl 3: S24-8, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19705544

ABSTRACT

OBJECTIVE: To identify two closely related Brugia malayi and B. pahangi in cat reservoirs by using high resolution melting real-time PCR (HRM real-time PCR). MATERIAL AND METHOD: HRM analysis on the Corbett Rotor-Gene 6000 instrument was used to test 5 Brugia specimens by using five sets of specific primers for HhaI repetitive region (HR), small heat shock protein (SHP), small subunit ribosomal DNA (18S rDNA), internal transcribed spacer region (ITS), and trans-spliced leading Exon I gene (SLX1). RESULTS: HRM analysis of ITS and SLX clearly generated 2 profiles of B. malayi and B. pahangi while those of HR, 18S rDNA, and SHP could classify B. pahangi. CONCLUSION: HRM is a simple and rapid method for identification of two closely related B. malayi and B. pahangi in which it can detect both parasites within 30 min after real-time PCR detection. This assay is probe-free HRM and reduces a risk of PCR carryover. It does not require multiplex methods and DNA sequencing; therefore, HRM provides a new approach for genetic screening and rapid detection of closely related species in a clinical laboratory.


Subject(s)
Brugia malayi/isolation & purification , Brugia pahangi/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction/instrumentation , Animals , Brugia malayi/genetics , Brugia pahangi/genetics , Cats , Heat-Shock Proteins/genetics , Humans , Oligonucleotide Array Sequence Analysis , Repetitive Sequences, Nucleic Acid , Sequence Analysis, DNA , Time Factors
14.
Int J Parasitol ; 39(10): 1071-81, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19401205

ABSTRACT

Heat shock protein 90 (Hsp-90) is a highly conserved essential protein in eukaryotes. Here we describe the molecular characterisation of hsp-90 from three nematodes, the free-living Caenorhabditis elegans (Ce) and the parasitic worms Brugia pahangi (Bp) and Haemonchus contortus (Hc). These molecules were functionally characterised by rescue of a Ce-daf-21 (hsp-90) null mutant. Our results show a gradient of rescue: the C. elegans endogenous gene provided full rescue of the daf-21 mutant, while Hc-hsp-90 provided partial rescue. In contrast, no rescue could be obtained using a variety of Bp-hsp-90 constructs, despite the fact that Bp-hsp-90 was transcribed and translated in the mutant worms. daf-21 RNA interference (RNAi) experiments were carried out to determine whether knock-down of the endogenous daf-21 mRNA in N2 worms could be complemented by expression of either parasite gene. However neither parasite gene could rescue the daf-21 (RNAi) phenotypes. These results indicate that factors other than the level of sequence identity are important for determining whether parasite genes can functionally complement in C. elegans.


Subject(s)
Gene Expression Regulation/genetics , Genes, Helminth/genetics , HSP90 Heat-Shock Proteins/genetics , Nematoda/genetics , Animals , Brugia pahangi/genetics , Caenorhabditis elegans/genetics , HSP90 Heat-Shock Proteins/metabolism , Haemonchus/genetics , Molecular Sequence Data , Mutation , Nematoda/parasitology , Sequence Analysis, DNA
15.
Article in English | MEDLINE | ID: mdl-19323030

ABSTRACT

This study described the diagnosis of a mixed infection of Brugia malayi and Brugia pahangi in a single domestic cat using the internal transcribed spacer 1 (ITS1) region. Following polymerase chain reaction amplification of the ITS1 region, the 580 bp amplicon was cloned, and 29 white colonies were randomly selected for DNA sequencing and phylogenetic tree construction. A DNA parsimony tree generated two groups of Brugia spp with one group containing 6 clones corresponding to B. pahangi and the other 23 clones corresponding to B. malayi. This indicated that mixed infection of the two Brugia spp, B. pahangi and B. malayi, had occurred in a single host.


Subject(s)
Brugia malayi/genetics , Brugia pahangi/genetics , Cat Diseases/diagnosis , DNA, Helminth/genetics , DNA, Ribosomal Spacer/genetics , Filariasis/veterinary , Animals , Base Sequence , Brugia malayi/classification , Brugia malayi/isolation & purification , Brugia pahangi/classification , Brugia pahangi/isolation & purification , Cat Diseases/genetics , Cat Diseases/parasitology , Cat Diseases/prevention & control , Cats , DNA, Helminth/analysis , DNA, Ribosomal Spacer/analysis , Disease Reservoirs/veterinary , Filariasis/diagnosis , Filariasis/parasitology , Filariasis/prevention & control , Phylogeny , Polymerase Chain Reaction/methods , Polymerase Chain Reaction/veterinary , Polymorphism, Restriction Fragment Length , Sequence Analysis, DNA
16.
Parasitol Res ; 104(6): 1465-9, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19205740

ABSTRACT

The internal transcribed spacer (ITS) region was used to study the intraspecies variation of Brugia spp. in cat reservoirs. Blood specimens from seven naturally infected cats were collected from two different geographical brugian-endemic areas in Thailand. The DNAPAR tree of these Brugia spp. was constructed using a maximum likelihood approach based on ITS nucleotide sequences and was compared to those of Brugia malayi, Brugia pahangi, and Dirofilaria immitis that were previously reported in GenBank. The phylogenetic trees inferred from ITS1, ITS2, and complete ITS sequences indicated that B. malayi and B. pahangi were separated into two clades, and subgroups were generated within each clade. The data revealed that ITS2 sequences were less informative than ITS1 for studying intraspecies variation of Brugia spp. Our results are primary data for intraspecies variation of B. malayi and B. pahangi in cat reservoirs. The information could be applicable for studying the molecular epidemiology and the dynamic nature of the parasites.


Subject(s)
Biodiversity , Brugia malayi/classification , Brugia pahangi/classification , Cat Diseases/parasitology , DNA, Ribosomal Spacer/genetics , Disease Reservoirs , Elephantiasis, Filarial/veterinary , Animals , Blood/parasitology , Brugia malayi/genetics , Brugia malayi/isolation & purification , Brugia pahangi/genetics , Brugia pahangi/isolation & purification , Cats , DNA, Helminth/chemistry , DNA, Helminth/genetics , DNA, Ribosomal Spacer/chemistry , Elephantiasis, Filarial/parasitology , Molecular Sequence Data , Phylogeny , Sequence Analysis, DNA , Thailand
17.
Trop Biomed ; 25(1): 87-92, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18600209

ABSTRACT

This paper presents the first reported use of 18S rRNA gene sequence to determine the phylogeny of Brugia pahangi. The 18S rRNA nucleotide sequence of a Malaysian B. pahangi isolate was obtained by PCR cloning and sequencing. The sequence was compared with 18S rRNA sequences of other nematodes, including those of some filarial nematodes. Multiple alignment and homology analysis suggest that B. pahangi is closely related to B. malayi and Wuchereria bancrofti. Phylogenetic trees constructed using Neighbour Joining, Minimum Evolution and Maximum Parsimony methods correctly grouped B. pahangi with other filarial nematodes, with closest relationship with B. malayi and W. bancrofti. The phylogeny of B. pahangi obtained in this study is in concordance with those previously reported, in which the 5S rRNA gene spacer region and cytochrome oxidase subunit I (COI) sequences were used.


Subject(s)
Brugia pahangi , Phylogeny , RNA, Ribosomal, 18S/genetics , Sequence Analysis, DNA , Animals , Base Sequence , Brugia pahangi/classification , Brugia pahangi/genetics , DNA, Helminth/analysis , Filariasis/parasitology , Molecular Sequence Data , Sequence Alignment
18.
Exp Parasitol ; 118(1): 89-95, 2008 Jan.
Article in English | MEDLINE | ID: mdl-17706647

ABSTRACT

Events occurring during early filarial nematode migrations are central to parasite establishment but rarely studied. Brugia pahangi larvae injected intradermal (ID) into the hind limb of the gerbil (Meriones unguiculatus) can be recovered from the popliteal lymph node (POP) at 3 days post-infection (DPI). They have been designated migrating larvae (IDL3). Alternatively, L3 recovered at 3DPI from the peritoneal cavity (IPL3) do not migrate. Subtracted cDNA libraries using IDL3 and IPL3 revealed distinct gene profiles between IDL3 and IPL3. Troponin-c was significantly upregulated in IDL3, while Cathepsin L was significantly increased in IPL3. Differences in mRNA levels were also observed with these and other genes between IDL3, IPL3 and L3 isolated from mosquitoes (VL3). These data suggest that migratory activity, exposure to potentially different host environments and/or host location may be important external factors in influencing larval gene expression.


Subject(s)
Brugia pahangi/physiology , Filariasis/parasitology , Gene Expression Regulation, Developmental/physiology , Animals , Base Sequence , Brugia pahangi/genetics , Brugia pahangi/metabolism , DNA, Complementary/chemistry , Gene Library , Gerbillinae , Helminth Proteins/genetics , Helminth Proteins/metabolism , Larva/genetics , Larva/metabolism , Larva/physiology , Lymph Nodes/parasitology , Molecular Sequence Data , Movement , Peritoneal Cavity/parasitology , RNA, Helminth/genetics , RNA, Helminth/isolation & purification , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Skin/parasitology , Transcription, Genetic
19.
BMC Genomics ; 8: 463, 2007 Dec 18.
Article in English | MEDLINE | ID: mdl-18088420

ABSTRACT

BACKGROUND: Armigeres subalbatus is a natural vector of the filarial worm Brugia pahangi, but it rapidly and proficiently kills Brugia malayi microfilariae by melanotic encapsulation. Because B. malayi and B. pahangi are morphologically and biologically similar, the Armigeres-Brugia system serves as a valuable model for studying the resistance mechanisms in mosquito vectors. We have initiated transcriptome profiling studies in Ar. subalbatus to identify molecular components involved in B. malayi refractoriness. RESULTS: These initial studies assessed the transcriptional response of Ar. subalbatus to B. malayi at 1, 3, 6, 12, 24, 48, and 72 hrs after an infective blood feed. In this investigation, we initiated the first holistic study conducted on the anti-filarial worm immune response in order to effectively explore the functional roles of immune-response genes following a natural exposure to the parasite. Studies assessing the transcriptional response revealed the involvement of unknown and conserved unknowns, cytoskeletal and structural components, and stress and immune responsive factors. The data show that the anti-filarial worm immune response by Ar. subalbatus to be a highly complex, tissue-specific process involving varied effector responses working in concert with blood cell-mediated melanization. CONCLUSION: This initial study provides a foundation and direction for future studies, which will more fully dissect the nature of the anti-filarial worm immune response in this mosquito-parasite system. The study also argues for continued studies with RNA generated from both hemocytes and whole bodies to fully expound the nature of the anti-filarial worm immune response.


Subject(s)
Aedes/genetics , Culicidae/genetics , Host-Parasite Interactions/genetics , Immunity, Innate , Insect Vectors/genetics , Microfilariae/genetics , Aedes/immunology , Aedes/parasitology , Animals , Brugia malayi/genetics , Brugia malayi/physiology , Brugia pahangi/genetics , Brugia pahangi/physiology , Cluster Analysis , Culicidae/immunology , Culicidae/parasitology , Gene Expression Profiling/methods , Host-Parasite Interactions/immunology , Insect Vectors/immunology , Insect Vectors/parasitology , Melanins/immunology , Microfilariae/physiology , Molecular Sequence Data , RNA, Messenger/analysis , Species Specificity , Transcription, Genetic
20.
J Parasitol ; 93(6): 1378-87, 2007 Dec.
Article in English | MEDLINE | ID: mdl-18314684

ABSTRACT

Brugia pahangi infection of dogs is a well characterized model of human lymphatic filariasis in which sera consistently show IgG or IgE reactivity to a 35-kDa antigen. Using dog lymph node B cells, we previously established a heterohybridoma cell line producing canine monoclonal IgE (cmAb 2.39) that activates and degranulates canine mast cells, and specifically recognizes a 35-kDa B. pahangi antigen. By affinity purification and sequencing of the native protein from B. pahangi adults, a 19-amino acid sequence was obtained; the derived nucleotide sequence showed homology to a Brugia malayi and 2 related Onchocerca volvulus expressed sequence tag (EST) clones from the Filarial Genome Project database. Consensus primers amplified a 244-bp product from adult and infective larval stage cDNA libraries of B. malayi, O. volvulus, and Wuchereria bancrofti, but not from those of nonfilarial nematodes. The B. malayi EST clone only showed nucleotide sequence homology to O. volvulus EST sequences. A 684-bp region from the open reading frame was expressed as a glutathione S-transferase fusion protein designated BmAl-1. CmAb 2.39, as well as serum IgE from dogs infected with B. pahangi and canine filarial heartworm, Dirofilaria immitis, recognized BmAl-1 on enzyme-linked immunosorbent assay and Western blots. BmAl-1 showed high binding affinity for a fatty acid; however, a search for sequence homology with known fatty acid binding proteins indicated that BmAl-1 is a unique fatty acid binding protein. This 35-kDa protein seems to be highly conserved in different stages and species of filarids, and it represents a previously unknown allergen that is possibly involved in the pathogenesis of filarial disease.


Subject(s)
Allergens/genetics , Antigens, Helminth/genetics , Brugia/genetics , Brugia/immunology , Fatty Acid-Binding Proteins/genetics , Allergens/chemistry , Allergens/immunology , Amino Acid Sequence , Animals , Antibodies, Helminth/immunology , Antibodies, Monoclonal/immunology , Antigens, Helminth/chemistry , Antigens, Helminth/immunology , B-Lymphocytes/immunology , Base Sequence , Blotting, Western , Brugia pahangi/genetics , Brugia pahangi/immunology , Disease Models, Animal , Dogs , Epitopes/immunology , Fatty Acid-Binding Proteins/chemistry , Fatty Acid-Binding Proteins/immunology , Female , Filariasis/immunology , Filariasis/parasitology , Gerbillinae , Glutathione Transferase/genetics , Glutathione Transferase/immunology , Immunoglobulin E/blood , Immunoglobulin E/immunology , Male , Molecular Sequence Data , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/immunology , Sequence Homology
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