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1.
J Med Chem ; 64(15): 11364-11378, 2021 08 12.
Article in English | MEDLINE | ID: mdl-34342437

ABSTRACT

"Multi-action" Pt(IV) derivatives of cisplatin with combretastatin A4 (CA4) bioactive ligands that are conjugated to Pt(IV) by carbonate are unique because the ligand (IC50 < 10 nM) is dramatically 1000-folds more cytotoxic than cisplatin in vitro. The Pt(IV)-CA4 prodrugs were as cytotoxic as CA4 itself, indicating that the platinum moiety probably plays an insignificant role in triggering cytotoxicity, suggesting that the Pt(IV)-CA4 complexes act as prodrugs for CA4 rather than as true multi-action prodrugs. In vivo tests (Lewis lung carcinoma) show that ctc-[Pt(NH3)2(PhB)(CA4)Cl2] inhibited tumor growth by 93% compared to CA4 (67%), cisplatin (84%), and 1:1:1 cisplatin/CA4/PhB (85%) while displaying <5% body weight loss compared to cisplatin (20%) or CA4 (10%). In this case, and perhaps with other extremely potent bioactive ligands, platinum(IV) acts merely as a self-immolative carrier triggered by reduction in the cancer cell with only a minor contribution to cytotoxicity.


Subject(s)
Antineoplastic Agents/pharmacology , Carbonic Anhydrase IV/metabolism , Organoplatinum Compounds/pharmacology , Prodrugs/pharmacology , Animals , Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/chemistry , Carbonic Anhydrase IV/chemistry , Cell Line , Cell Proliferation/drug effects , Cricetulus , Dose-Response Relationship, Drug , Drug Screening Assays, Antitumor , Humans , Ligands , Molecular Structure , Organoplatinum Compounds/chemical synthesis , Organoplatinum Compounds/chemistry , Prodrugs/chemical synthesis , Prodrugs/chemistry , Prohibitins , Structure-Activity Relationship
2.
Int J Mol Sci ; 21(10)2020 May 22.
Article in English | MEDLINE | ID: mdl-32456080

ABSTRACT

Various sulfonamide derivatives are intensively studied as anticancer agents owing to their inhibitory activity against human tumor-associated carbonic anhydrase isoforms. In this work, different synthetic procedures for the series of 1,3,5-triazinyl-aminobenzenesulfonamide conjugates with amino acids, possessing polar uncharged, negatively charged, and hydrophobic side chain, were studied and optimized with respect to the yield/purity of the synthesis/product as well as the time of synthetic reaction. These procedures were compared to each other via characteristic HPLC-ESI-DAD/QTOF/MS analytical product profiles, and their benefits as well as limitations were discussed. For new sulfonamide derivatives, incorporating s-triazine with a symmetric pair of polar and some less-polar proteinogenic amino acids, inhibition constants (KIs) against four human carboanhydrases (hCAs), namely cytosolic hCA I, II, transmembrane hCA IV, and the tumor-associated, membrane-bound hCA IX isoforms, were computationally predicted applying various methods of the advanced statistical analysis. Quantitative structure-activity relationship (QSAR) analysis indicated an impressive KI ratio (hCA II/hCA IX) 139.1 and hCA IX inhibition constant very similar to acetazolamide (KI = 29.6 nM) for the sulfonamide derivative disubstituted with Gln. The derivatives disubstituted with Ser, Thr, and Ala showed even lower KIs (8.7, 13.1, and 8.4 nM, respectively).


Subject(s)
Amino Acids/chemistry , Carbonic Anhydrase Inhibitors/chemistry , Carbonic Anhydrases/chemistry , Sulfonamides/chemistry , Triazines/chemistry , Acetazolamide/pharmacology , Antigens, Neoplasm/chemistry , Carbonic Anhydrase I/chemistry , Carbonic Anhydrase II/chemistry , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase IX/chemistry , Carbonic Anhydrase Inhibitors/pharmacology , Chromatography, High Pressure Liquid , Hydrophobic and Hydrophilic Interactions , Mass Spectrometry , Models, Molecular , Neural Networks, Computer , Protein Isoforms/metabolism , Software , Structure-Activity Relationship , Benzenesulfonamides
3.
Anal Biochem ; 550: 132-136, 2018 06 01.
Article in English | MEDLINE | ID: mdl-29729279

ABSTRACT

The most widely recognized activity of the large family of the metalloenzyme carbonic anhydrases (CAs) is the diffusion-controlled hydration of CO2 to HCO3- and one proton, and the less rapid dehydration of HCO3- to CO2: CO2 + H2O ⇆ HCO3- + H+. CAs also catalyze the reaction of water with other electrophiles such as aromatic esters, sulfates and phosphates, thus contributing to lending to CAs esterase, sulfatase and phosphatase activity, respectively. Renal CAII and CAIV are involved in the reabsorption of nitrite, the autoxidation product of the signalling molecule nitric oxide (NO): 4 NO + O2 + 2 H2O → 4 ONO- + 4 H+. Bovine and human CAII and CAIV have been reported to exert nitrite reductase and nitrous anhydride activity: 2 NO2- + 2 H+ ⇆ [2 HONO] ⇆ N2O3 + H2O. In the presence of L-cysteine, NO may be formed. In the literature, these issues are controversial, mainly due to analytical shortcomings, i.e., the inability to detect authentic HONO and N2O3. Here, we present a gas chromatography-mass spectrometry (GC-MS) assay to unambiguously detect and quantify the nitrous anhydrase activity of CAs. The assay is based on the hydrolysis of N2O3 in H218O to form ON18O- and 18ON18O-. After pentafluorobenzyl bromide derivatization and electron capture negative-ion chemical ionization of the pentafluorobenzyl nitro derivatives, quantification is performed by selected-ion monitoring of the anions with mass-to-charge (m/z) ratios of 46 (ONO-), m/z 48 (ON18O- and 18ONO-), m/z 50 (18ON18O-) and m/z 47 (O15NO-, internal standard).


Subject(s)
Carbonic Anhydrase II/chemistry , Carbonic Anhydrase IV/chemistry , Nitric Oxide/chemistry , Nitrite Reductases/chemistry , Nitrogen Dioxide/chemistry , Animals , Cattle , Humans
4.
Eur J Med Chem ; 151: 363-375, 2018 May 10.
Article in English | MEDLINE | ID: mdl-29635168

ABSTRACT

Two series of 2-benzylpiperazines have been prepared and tested for the inhibition of physiologically relevant isoforms of human carbonic anhydrases (hCA, EC 4.2.1.1). The new compounds carry on one nitrogen atom of the piperazine ring a sulfamoylbenzamide group as zinc-binding moiety, and different alkyl/acyl/sulfonyl groups on the other nitrogen. Regio- and stero-isomers are described. The majority of these compounds showed Ki values in the low-medium nanomolar range against hCA I, II and IV, but not IX. In many instances interaction with the enzyme was enantioselective. The binding mode has been studied by means of X-ray crystallography and molecular modelling. Two compounds, evaluated in rabbit models of glaucoma, were able to significantly reduce intraocular pressure, making them interesting candidates for further studies.


Subject(s)
Carbonic Anhydrase Inhibitors/chemistry , Carbonic Anhydrase Inhibitors/therapeutic use , Glaucoma/drug therapy , Intraocular Pressure/drug effects , Piperazines/chemistry , Piperazines/therapeutic use , Animals , Carbonic Anhydrase I/antagonists & inhibitors , Carbonic Anhydrase I/chemistry , Carbonic Anhydrase I/metabolism , Carbonic Anhydrase II/antagonists & inhibitors , Carbonic Anhydrase II/chemistry , Carbonic Anhydrase II/metabolism , Carbonic Anhydrase IV/antagonists & inhibitors , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase IV/metabolism , Carbonic Anhydrase IX/antagonists & inhibitors , Carbonic Anhydrase IX/chemistry , Carbonic Anhydrase IX/metabolism , Carbonic Anhydrase Inhibitors/chemical synthesis , Carbonic Anhydrase Inhibitors/pharmacology , Carbonic Anhydrases/chemistry , Carbonic Anhydrases/metabolism , Crystallography, X-Ray , Glaucoma/metabolism , Glaucoma/physiopathology , Humans , Male , Molecular Docking Simulation , Piperazines/chemical synthesis , Piperazines/pharmacology , Rabbits , Stereoisomerism
5.
Eur Biophys J ; 47(3): 271-290, 2018 Apr.
Article in English | MEDLINE | ID: mdl-28975383

ABSTRACT

Membrane-associated carbonic anhydrase (CA) isoform IV participates in carbon metabolism and pH homeostasis and is implicated in the development of eye diseases such as retinitis pigmentosa and glaucoma. A series of substituted benzenesulfonamides were designed and their binding affinity to CA IV was determined by fluorescent thermal shift assay and isothermal titration calorimetry (ITC). Compound [(4-chloro-2-phenylsulfanyl-5-sulfamoyl-benzoyl)amino]propyl acetate (19) bound CA IV with the K d of 1.0 nM and exhibited significant selectivity over the remaining 11 human CA isoforms. The compound could be developed as a drug targeting CA IV. Various forms of recombinant CA IV were produced in Escherichia coli and mammalian cell cultures. Comparison of their temperature stability in various buffers and salt solutions demonstrated that CA IV is most stable at slightly alkaline conditions and at elevated sodium sulfate concentrations. High-resolution X-ray crystallographic structures of ortho-Cl and meta-thiazole-substituted benzene sulfonamide in complex with CA IV revealed the position of and interactions between the ligand and the protein. Sulfonamide inhibitor binding to CA IV is linked to several reactions-the deprotonation of the sulfonamide amino group, the protonation of CA-Zn(II)-bound hydroxide at the active site of CA IV, and the compensating reactions of the buffer. The dissection of binding-linked reactions yielded the intrinsic thermodynamic parameters, characterizing the interaction between CA IV and the sulfonamides in the binding-able protonation forms, including Gibbs energy, enthalpy, and entropy, that could be used for the characterization of binding to any CA in the process of drug design.


Subject(s)
Carbonic Anhydrase IV/antagonists & inhibitors , Carbonic Anhydrase IV/metabolism , Carbonic Anhydrase Inhibitors/metabolism , Recombinant Proteins/metabolism , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase Inhibitors/pharmacology , Catalytic Domain , Humans , Ligands , Models, Molecular , Protein Binding , Recombinant Proteins/chemistry , Thermodynamics
6.
J Med Chem ; 57(22): 9435-46, 2014 Nov 26.
Article in English | MEDLINE | ID: mdl-25358084

ABSTRACT

Human carbonic anhydrase IX (CA IX) is highly expressed in tumor tissues, and its selective inhibition provides a potential target for the treatment of numerous cancers. Development of potent, highly selective inhibitors against this target remains an unmet need in anticancer therapeutics. A series of fluorinated benzenesulfonamides with substituents on the benzene ring was designed and synthesized. Several of these exhibited a highly potent and selective inhibition profile against CA IX. Three fluorine atoms significantly increased the affinity by withdrawing electrons and lowering the pKa of the benzenesulfonamide group. The bulky ortho substituents, such as cyclooctyl or even cyclododecyl groups, fit into the hydrophobic pocket in the active site of CA IX but not CA II, as shown by the compound's co-crystal structure with chimeric CA IX. The strongest inhibitor of recombinant human CA IX's catalytic domain in human cells achieved an affinity of 50 pM. However, the high affinity diminished the selectivity. The most selective compound for CA IX exhibited 10 nM affinity. The compound that showed the best balance between affinity and selectivity bound with 1 nM affinity. The inhibitors described in this work provide the basis for novel anticancer therapeutics targeting CA IX.


Subject(s)
Carbonic Anhydrase Inhibitors/chemistry , Carbonic Anhydrases/chemistry , Drug Design , Benzene/chemistry , Calorimetry , Carbon Dioxide/chemistry , Carbonic Anhydrase IV/chemistry , Catalysis , Catalytic Domain , Crystallization , Crystallography, X-Ray , Humans , Hydrogen-Ion Concentration , Kinetics , Neoplasms/drug therapy , Protein Binding , Protein Conformation , Recombinant Proteins/chemistry , Sulfonamides/chemistry , Thermodynamics
7.
Subcell Biochem ; 75: 157-79, 2014.
Article in English | MEDLINE | ID: mdl-24146379

ABSTRACT

Carbonic anhydrase IV is one of 12 active human isozymes and one of four expressed on the extracellular surfaces of certain endothelial and epithelial cells. It is unique in being attached to the plasma membrane by a glycosyl-phosphatiydyl-inositol (GPI) anchor rather than by a membrane-spanning domain. It is also uniquely resistant to high concentrations of sodium dodecyl sulfate (SDS), which allows purification from tissues by inhibitor affinity chromatography without contamination by other isozymes. This unique resistance to SDS and recovery following denaturation is explained by the two disulfide bonds. The 35-kDa human CA IV is a "high activity" isozyme in CO2 hydration activity, like CA II, and has higher activity than other isozymes in catalyzing the dehydration of HCO3 (-). Human CA IV is also unique in that it contains no oligosaccharide chains, where all other mammalian CA IVs are glycoproteins with one to several oligosaccharide side chains.Although CA IV has been shown to be active in mediating CO2 and HCO3 (-) transport in many important tissues like kidney and lung, and in isolated cells from brain and muscle, the gene for CA IV appears not to be essential. The CA IV knockout mouse produced by targeted mutagenesis, though slightly smaller and produced in lower than expected numbers, is viable and has no obvious mutant phenotype. Conversely, several dominant negative mutations in humans are associated with one form of reitinitis pigmentosa (RP-17), which we attribute to unfolded protein accumulation in the choreocapillaris, leading to apoptosis of cells in the overlying retina.


Subject(s)
Carbonic Anhydrase IV/biosynthesis , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase IV/isolation & purification , Structure-Activity Relationship , Animals , Carbonic Anhydrase IV/genetics , Carbonic Anhydrase IV/metabolism , Catalysis , Enzyme Stability , Gene Expression Regulation, Enzymologic , Humans , Isoenzymes/chemistry , Isoenzymes/genetics , Isoenzymes/metabolism , Mice , Mutation , Rats , Tissue Distribution
8.
Subcell Biochem ; 75: 349-59, 2014.
Article in English | MEDLINE | ID: mdl-24146387

ABSTRACT

Inhibition of carbonic anhydrase (CA, EC 4.2.1.1) has pharmacologic applications in the treatment of glaucoma, a disease affecting a large number of people and characterized by an elevated intraocular pressure (IOP). At least three isoforms, CA II, IV and XII are targeted by the sulfonamide inhibitors, some of which are clinically used drugs. Acetazolamide, methazolamide and dichlorophenamide are first generation CA inhibitors (CAIs) still used as systemic drugs for the management of this disease. Dorzolamide and brinzolamide represent the second generation inhibitors, being used topically, as eye drops, with less side effects compared to the first generation drugs. Third generation inhibitors have been developed by using the tail approach, but they did not reach the clinics yet. The most promising such derivatives are the sulfonamides incorporating either tails with nitric oxide releasing moieties or hybrid drugs possessing prostaglandin (PG) F agonist moieties in their molecules. Recently, the dithiocarbamates have also been described as CAIs possessing IOP lowering effects in animal models of glaucoma. CAIs are used alone or in combination with other drugs such as adrenergic agonist/antagonists, or PG analogs, being an important component of the antiglaucoma drugs armamentarium.


Subject(s)
Carbonic Anhydrase Inhibitors/therapeutic use , Glaucoma/drug therapy , Structure-Activity Relationship , Sulfanilamides/therapeutic use , Acetazolamide/therapeutic use , Carbonic Anhydrase II/antagonists & inhibitors , Carbonic Anhydrase II/chemistry , Carbonic Anhydrase IV/antagonists & inhibitors , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase Inhibitors/chemistry , Carbonic Anhydrases/chemistry , Carbonic Anhydrases/metabolism , Glaucoma/pathology , Humans , Intraocular Pressure/drug effects , Nitric Oxide/chemistry , Sulfanilamide , Sulfonamides/therapeutic use , Thiazines/therapeutic use
9.
Eur J Med Chem ; 66: 1-11, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23777898

ABSTRACT

A series of sulfonamides containing coumarin moieties had been prepared that showed a very interesting profile for the inhibition of two human carbonic anhydrase inhibitors. These compounds were evaluated for their ability to inhibit the enzymatic activity of the physiologically dominant isozymes hCA II and the tumor-associated isozyme hCA IX. The most potent inhibitor against hCA II and IX were compounds 5d (IC50 = 23 nM) and 5l (IC50 = 24 nM), respectively. These sulfonamides containing coumarin moieties may prove interesting lead candidates to target tumor-associated CA isozymes, wherein the CA domain is located extracellularly. Eighteen compounds were scrutinized by CoMFA and CoMSIA techniques of 3D quantitative structure-activity relationship. Nine of the compounds were evaluated for cytotoxicity against human macrophage.


Subject(s)
Carbonic Anhydrase II/antagonists & inhibitors , Carbonic Anhydrase IV/antagonists & inhibitors , Coumarins/chemistry , Coumarins/pharmacology , Drug Design , Quantitative Structure-Activity Relationship , Sulfonamides/chemistry , Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/chemistry , Antineoplastic Agents/metabolism , Antineoplastic Agents/pharmacology , Apoptosis/drug effects , Carbonic Anhydrase II/chemistry , Carbonic Anhydrase II/metabolism , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase IV/metabolism , Carbonic Anhydrase Inhibitors/chemical synthesis , Carbonic Anhydrase Inhibitors/chemistry , Carbonic Anhydrase Inhibitors/metabolism , Carbonic Anhydrase Inhibitors/pharmacology , Chemistry Techniques, Synthetic , Coumarins/chemical synthesis , Coumarins/metabolism , Humans , Isoenzymes/antagonists & inhibitors , Isoenzymes/chemistry , Isoenzymes/metabolism , MCF-7 Cells , Melanoma, Experimental , Molecular Docking Simulation , Protein Conformation , Substrate Specificity
10.
Bioorg Med Chem Lett ; 18(24): 6332-5, 2008 Dec 15.
Article in English | MEDLINE | ID: mdl-18990571

ABSTRACT

A series of 2-substituted-1,3,4-thiadiazole-5-sulfamides was prepared and assayed as inhibitors of several carbonic anhydrase (CA, EC 4.2.1.1) isoforms, the cytosolic CA I and II, the membrane-associated CA IV and the mitochondrial CA VA and VB. The new compounds showed weak inhibitory activity against hCA I (K(I)s of 102 nM-7.42 microM), hCA II (K(I)s of 0.54-7.42 microM) and hCA IV (K(I)s of 4.32-10.05 microM) but were low nanomolar inhibitors of hCA VA and hCA VB, with inhibition constants in the range of 4.2-32 nM and 1.3-74 nM, respectively. Furthermore, the selectivity ratios for inhibiting the mitochondrial enzymes over CA II were in the range of 67.5-415, making these sulfamides the first selective CA VA/VB inhibitors.


Subject(s)
Carbonic Anhydrase II/chemistry , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase I/chemistry , Carbonic Anhydrase Inhibitors/chemical synthesis , Carbonic Anhydrase Inhibitors/pharmacology , Carbonic Anhydrase V/chemistry , Thiadiazoles/chemical synthesis , Thiadiazoles/pharmacology , Chemistry, Pharmaceutical/methods , Cytosol/enzymology , Cytosol/metabolism , Drug Design , Humans , Isoenzymes , Kinetics , Mitochondria/enzymology , Models, Biological , Models, Chemical
11.
Invest Ophthalmol Vis Sci ; 48(8): 3459-68, 2007 Aug.
Article in English | MEDLINE | ID: mdl-17652713

ABSTRACT

PURPOSE: The autosomal dominant retinitis pigmentosa (adRP) gene on chromosome 17, region q22 (RP17), was recently identified as a glycosylphosphatidylinositol membrane-anchored zinc metalloenzyme (protein CAIV), highly expressed in the choriocapillaris of the eye and undetectable in the retina. Only two missense mutations have thus far been identified in the gene CA4. Functional analysis of these mutations demonstrated that retinal disease may result from perturbation of pH homeostasis in the outer retina, after disruption of CAIV and sodium bicarbonate cotransporter 1 (NBC1)-mediated bicarbonate transport. CA4 was screened in a panel of patients with RP, to expand the mutation spectrum of this novel adRP gene and understand its pathogenic mechanism. METHODS: A total of 96 patients with simplex RP and adRP of Chinese ethnicity were screened for mutations in the eight coding exons of the CA4 gene by bidirectional sequencing. Functional consequences of CA4 mutations on the NBC1-mediated bicarbonate transport were studied by measuring bicarbonate fluxes in HEK293 cells cotransfected with NBC1 and CA4 mutant cDNAs. RESULTS: Thirteen sequence alterations were identified, including a novel mutation within exon 3 of CA4 (R69H) in a patient with simplex RP. R69H was not found in 432 normal chromosomes. R69H CAIV impaired NBC1-mediated pH recovery after acid load. CONCLUSIONS: A novel mutation has been identified in CA4 that provides further evidence that impaired pH regulation may underlie photoreceptor degeneration in RP17. This study indicates that, as with European patients with RP, mutations in CA4 also account for

Subject(s)
Asian People/genetics , Carbonic Anhydrase IV/genetics , Mutation, Missense , Retinitis Pigmentosa/ethnology , Retinitis Pigmentosa/genetics , Amino Acid Sequence , Bicarbonates/metabolism , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase IV/metabolism , Cell Line , Chromosomes, Human, Pair 17 , DNA Mutational Analysis , Extracellular Space/enzymology , Humans , Hydrogen-Ion Concentration , Immunoprecipitation , Kidney/cytology , Molecular Sequence Data , Protein Structure, Tertiary , Retinitis Pigmentosa/metabolism , Sodium-Bicarbonate Symporters/metabolism
12.
Bioorg Med Chem Lett ; 17(4): 1037-42, 2007 Feb 15.
Article in English | MEDLINE | ID: mdl-17127063

ABSTRACT

The unique secretory isozyme of human carbonic anhydrase (hCA, EC 4.2.1.1), hCA VI, has been cloned, expressed, and purified. The kinetic parameters for the CO(2) hydration reaction proved hCA VI to possess a k(cat) of 3.4x10(5)s(-1) and k(cat)/K(M) of 4.9x10(7)M(-1)s(-1) (at pH 7.5 and 20 degrees C). hCA VI has a significant catalytic activity for the physiological reaction, of the same order of magnitude as isoforms CA I or CA IX. A series of anions (such as bicarbonate, chloride, nitrate, etc.) were shown to inhibit the activity of the enzyme, with inhibition constants typically in the range of 0.60-0.90mM. The best hCA VI inhibitors were cyanide, azide, sulfamide, and sulfamate, with inhibition constants in the range of 70-90microM.


Subject(s)
Anions/pharmacology , Carbonic Anhydrase IV/antagonists & inhibitors , Carbonic Anhydrase Inhibitors/pharmacology , Acetazolamide/pharmacology , Amino Acid Sequence , Buffers , Carbon Dioxide/chemistry , Carbonic Anhydrase IV/biosynthesis , Carbonic Anhydrase IV/chemistry , Catalysis , Cloning, Molecular , Cytosol/enzymology , Humans , Kinetics , Metalloproteins/chemistry , Molecular Sequence Data
13.
J Enzyme Inhib Med Chem ; 20(3): 251-9, 2005 Jun.
Article in English | MEDLINE | ID: mdl-16119196

ABSTRACT

A quantitative structure-activity relationship (QSAR) study is made on a series of aromatic/heterocyclic sulfonamides and their charged derivatives acting as carbonic anhydrase (CA) inhibitors. These compounds were studied by Scozzafava et al. (J. Med. Chem. 2000; 43: 292) for the selective inhibition of CAs--sulfonamides generally do not discriminate between different CA isozymes and hence exhibit many undesirable side effects when used as drugs against a particular disease. In this communication, an attempt has been made to investigate the physicochemical and structural properties that can make them selective for a given CA isozyme. Based on in vitro data reported by Scozzafava et al. against two cytosolic isozymes and one membrane-bound isozyme, the QSAR study has shown that uncharged compounds cannot be made selective for cytosolic or membrane-bound isozyme since in both the cases the compounds appear to follow the same mechanism of inhibition. However, for the charged compounds the polarizability of the molecule seems to greatly favor the inhibition of the membrane-bound enzyme, and hence they can be made selective for this enzyme by enhancing their polarizability, which is found to play no role in the inhibition of cytosolic enzymes.


Subject(s)
Carbonic Anhydrase Inhibitors/chemistry , Heterocyclic Compounds/pharmacology , Quantitative Structure-Activity Relationship , Sulfonamides/pharmacology , Carbonic Anhydrase I/antagonists & inhibitors , Carbonic Anhydrase I/chemistry , Carbonic Anhydrase II/antagonists & inhibitors , Carbonic Anhydrase II/chemistry , Carbonic Anhydrase IV/antagonists & inhibitors , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase Inhibitors/pharmacology , Drug Design , Heterocyclic Compounds/chemistry , Isoenzymes/chemistry , Kinetics , Sulfonamides/chemistry
14.
J Am Chem Soc ; 126(21): 6504-5, 2004 Jun 02.
Article in English | MEDLINE | ID: mdl-15161249

ABSTRACT

The adhesion of cells is mediated by the binding of several cell-surface receptors to ligands found in the extracellular matrix. These receptors often have overlapping specificities for the peptide ligands, making it difficult to understand the roles for discrete receptors in cell adhesion, migration, and differentiation as well as to direct the selective adhesion of cell types in tissue-engineering applications. To overcome these limitations, we developed a strategy to rewire the receptor-ligand interactions between a cell and substrate to ensure that adhesion is mediated by a single receptor with unique specificity. The strategy combines a genetic approach to engineer the cell surface with a chimeric integrin receptor having a unique ligand binding domain with a surface chemistry approach to prepare substrates that present ligands that are bound by the new binding domain. We show that Chinese hamster ovary cells that are engineered with a chimeric beta1 integrin adhere, signal, and even migrate on a synthetic matrix.


Subject(s)
Carbonic Anhydrase IV/physiology , Cell Adhesion/physiology , Integrin alpha5beta1/physiology , Animals , CHO Cells , Carbonic Anhydrase IV/antagonists & inhibitors , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase IV/genetics , Carbonic Anhydrase Inhibitors/chemistry , Carbonic Anhydrase Inhibitors/pharmacology , Cell Movement , Chimerin Proteins/chemistry , Chimerin Proteins/genetics , Cricetinae , Focal Adhesion Protein-Tyrosine Kinases , Integrin alpha5beta1/chemistry , Integrin alpha5beta1/genetics , Oligopeptides/chemistry , Oligopeptides/metabolism , Phosphorylation , Protein Engineering/methods , Protein-Tyrosine Kinases/metabolism , Sulfonamides/chemistry , Sulfonamides/pharmacology , Surface Properties , Transfection , Benzenesulfonamides
15.
Histochem Cell Biol ; 121(2): 91-9, 2004 Feb.
Article in English | MEDLINE | ID: mdl-14740223

ABSTRACT

The high concentration of HCO(3)(-) ions (150 mM) in the human pancreatic ducts raises the question of the membrane proteins responsible for their secretion in addition to the Cl(-)/HCO(3)(-) exchanger. In this study, we investigated the expression of carbonic anhydrase IV (CA IV), a possible candidate. Experiments were carried out on specimens of normal human pancreas obtained from brain-dead donors ( n=9) as well as on isolated human ductal cells. Two antibodies were generated: CA IV NH(2) antibody directed against the NH(2) terminal of human glycosyl phosphatidylinositol (GPI)-anchored CA IV and CA IV COOH antibody directed against the COOH terminal of the same protein before its association with a GPI in the rough endoplasmic reticulum. A 35-kDa CA IV was detected in the homogenates of human pancreas. Immunocytochemistry demonstrated the expression of CA IV in centroacinar cells and in intercalated, intralobular, and interlobular ductal cells. The immunoreactivity observed with the CA IV COOH antibody was mainly localized on luminal membranes of ductal cells. Treatment of purified plasma membranes with phosphatidylinositol-phospholipase C indicated that the CA IV expressed in pancreatic ducts was not GPI-anchored. Its detection in the same extracts by the CA IV COOH antibody indicated that it was anchored by a hydrophobic segment at the carboxy terminal. Taken together, these results suggest that normal human pancreatic ductal cells express a 35-kDa CA IV anchored in their luminal plasma membrane by a hydrophobic segment of the COOH terminus. In view of its localization and its mode of anchorage in luminal plasma membranes, this CA IV may participate in the maintenance of luminal pH.


Subject(s)
Carbonic Anhydrase IV/metabolism , Pancreatic Ducts/enzymology , Bicarbonates/metabolism , Carbonic Anhydrase IV/chemistry , Cell Membrane/enzymology , Cell Separation , Cells, Cultured , Humans , Immunoenzyme Techniques , Pancreatic Ducts/cytology , Peptide Fragments/analysis , Peptide Fragments/metabolism , Protein Structure, Tertiary
16.
Biochemistry ; 42(42): 12321-9, 2003 Oct 28.
Article in English | MEDLINE | ID: mdl-14567693

ABSTRACT

Sodium/bicarbonate co-transporters (NBC) are crucial in the regulation of intracellular pH (pH(i)) and HCO(3)(-) metabolism. Electrogenic NBC1 catalyzes HCO(3)(-) fluxes in mammalian kidney, pancreas, and heart cells. Carbonic anhydrase IV (CAIV), which is also present in these tissues, is glycosylphosphatidyl inositol-anchored to the outer surface of the plasma membrane where it catalyzes the hydration-dehydration of CO(2)/HCO(3)(-). The physical and functional interactions of CAIV and NBC1 were investigated. NBC1 activity was measured by changes of pH(i) in NBC1-transfected HEK293 cells subjected to acid loads. Cotransfection of CAIV with NBC1 increased the rate of pH(i) recovery by 44 +/- 3%, as compared to NBC1-alone. In contrast, CAIV did not increase the functional activity of G767T-NBC1 (mutated on the fourth extracellular loop (EC4) of NBC1), and G767T-NBC1, unlike wild-type NBC1, did not interact with CAIV in glutathione-S-transferase pull-down assays. This indicates that G767 of NBC1 is directly involved in CAIV interaction. NBC1-mediated pH(i) recovery rate after acid load was inhibited by 40 +/- 7% when coexpressed with the inactive human CAII mutant, V143Y. V143Y CAII competes with endogenous CAII for interaction with NBC1 at the inner surface of the plasma membrane, which indicates that NBC1/CAII interaction is needed for full pH(i) recovery activity. We conclude that CAIV binds EC4 of NBC1, and this interaction is essential for full NBC1 activity. The tethering of CAII and CAIV close to the NBC1 HCO(3)(-) transport site maximizes the transmembrane HCO(3)(-) gradient local to NBC1 and thereby activates the transport rate.


Subject(s)
Carbonic Anhydrase IV/metabolism , Sodium-Bicarbonate Symporters/metabolism , Amino Acid Sequence , Carbonic Anhydrase IV/chemistry , Cell Line , Humans , Hydrogen-Ion Concentration , Molecular Sequence Data , Protein Binding , Sequence Homology, Amino Acid , Sodium-Bicarbonate Symporters/chemistry
17.
J Med Chem ; 46(11): 2187-96, 2003 May 22.
Article in English | MEDLINE | ID: mdl-12747790

ABSTRACT

Two series of halogenated sulfonamides have been prepared. The first consists of mono/dihalogenated sulfanilamides, whereas the second one consists of the mono/dihalogenated aminobenzolamides, incorporating equal or different halogens (F, Cl, Br, and I). These sulfonamides have been synthesized from the corresponding anilines by acetylation (protection of the amino group), chlorosulfonylation, followed either by amidation, or reaction with 5-amino-1,3,4-thiadiazole-2-sulfonamide (and eventually deacetylation). All these compounds, together with the six clinically used sulfonamide inhibitors (acetazolamide, methazolamide, ethoxzolamide, dichlorophenamide, dorzolamide, and brinzolamide) were investigated as inhibitors of the transmembrane, tumor-associated isozyme carbonic anhydrase (CA) IX. Inhibition data against the classical, physiologically relevant isozymes I, II, and IV were also obtained. CA IX shows an inhibition profile which is generally completely different from those of isozymes I, II, and IV, with potent inhibitors (inhibition constants in the range of 12-40 nM) among both simple aromatic (such as 3-fluoro-5-chloro-4-aminobenzenesulfonamide) as well as heterocyclic compounds (such as acetazolamide, methazolamide, 5-amino-1,3,4-thiadiazole-2-sulfonamide, aminobenzolamide, and dihalogenated aminobenzolamides). This first detailed CA IX inhibition study revealed many interesting leads, suggesting the possibility to design even more potent and eventually CA IX-selective inhibitors, with putative applications as antitumor agents.


Subject(s)
Antineoplastic Agents/chemical synthesis , Benzene Derivatives/chemical synthesis , Enzyme Inhibitors/chemical synthesis , Neoplasm Proteins/antagonists & inhibitors , Sulfonamides/chemical synthesis , Antigens, Neoplasm/chemistry , Antineoplastic Agents/chemistry , Benzene Derivatives/chemistry , Bromine/chemistry , Carbonic Anhydrase I/antagonists & inhibitors , Carbonic Anhydrase I/chemistry , Carbonic Anhydrase II/antagonists & inhibitors , Carbonic Anhydrase II/chemistry , Carbonic Anhydrase IV/antagonists & inhibitors , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase IX , Carbonic Anhydrases/chemistry , Chlorine/chemistry , Enzyme Inhibitors/chemistry , Humans , Iodine/chemistry , Neoplasm Proteins/chemistry , Structure-Activity Relationship , Sulfanilamides/chemical synthesis , Sulfanilamides/chemistry , Sulfonamides/chemistry
18.
J Med Chem ; 45(4): 888-93, 2002 Feb 14.
Article in English | MEDLINE | ID: mdl-11831900

ABSTRACT

Carbonic anhydrase inhibitors are effective in lowering intraocular pressure, the primary indication of glaucoma. Human carbonic anhydrase II, and possibly carbonic anhydrase IV (CAII and CAIV, respectively), help regulate fluid secretion into the anterior chamber of the eye. Because inhibitors currently formulated as drugs to treat glaucoma were designed to target CAII, an understanding of the structural basis of CAII-CAIV discrimination by inhibitors would be useful for probing the role of each isozyme in the etiology of the disease. Here, we report the X-ray crystal structures of three novel thieno[3,2-e]-1,2-thiazine-6-sulfonamides complexed with CAII and the computationally predicted structures of the same compounds complexed with CAIV. All three compounds bind with similar affinity to CAII, but they bind with up to 100-fold lower affinities to CAIV. Comparisons of experimentally determined structures of CAII-inhibitor complexes and computationally predicted structures of CAIV-inhibitor complexes allow us to rationalize these affinity trends and outline molecular features that may contribute to high-affinity inhibitor binding to CAIV. This study demonstrates how experimental structure determination methods and computational structure prediction methods can be used together to answer questions that cannot be answered by either method alone.


Subject(s)
Carbonic Anhydrase II/chemistry , Carbonic Anhydrase IV/chemistry , Carbonic Anhydrase Inhibitors/chemistry , Cyclic S-Oxides/chemistry , Sulfonamides/chemistry , Thiazines/chemistry , Crystallography, X-Ray , Models, Molecular , Molecular Conformation , Protein Binding , Substrate Specificity
19.
J Med Chem ; 45(2): 284-91, 2002 Jan 17.
Article in English | MEDLINE | ID: mdl-11784133

ABSTRACT

A novel class of tight binding carbonic anhydrase (CA) activators was designed by using histamine and histidine as lead molecules. Carnosine (beta-Ala-His) derivatives were synthesized by reaction of appropriately derivatized beta-alanines with imidazole/carboxy-protected histidine in the presence of carbodiimides, followed by removal of the various protecting groups. The derivatized beta-alanines mentioned above were in turn obtained by coupling of 4-fluorophenylsulfonylureido amino acids (fpu-AA) or 2-toluenesulfonylureido amino acids (ots-AA) with beta-Ala. Some structurally related dipeptides with the general formula fpu/ots-AA1-AA2 (AA, AA1, and AA2 represent amino acyl moieties) were also prepared by a similar strategy and used thereafter for obtaining CA activators incorporating a modified tetrapeptide scaffold. Many of the new tri-/tetrapeptide derivatives reported here proved to be efficient in vitro activators of three CA isozymes. Very good activity was detected against hCA I and bCA IV, for which some of the new compounds showed affinities in the 1-20 nM range (h = human; b = bovine isozymes), whereas against hCA II, their affinities were in the range of 10-40 nM. Ex vivo experiments showed some of the new activators to strongly enhance cytosolic red cell CA activity after incubation with human erythrocytes. This new class of CA activators might lead to the development of drugs/diagnostic tools for the management of CA deficiency syndromes, as well as for the pharmacological enhancement of synaptic efficacy, spatial learning, and memory. This may constitute a new approach for the treatment of Alzheimer's disease and other conditions in need of achieving memory therapy.


Subject(s)
Carbonic Anhydrase II/metabolism , Carbonic Anhydrase IV/metabolism , Carbonic Anhydrase I/metabolism , Dipeptides/chemistry , Enzyme Activators/chemical synthesis , Oligopeptides/chemical synthesis , Animals , Carbonic Anhydrase I/chemistry , Carbonic Anhydrase II/chemistry , Carbonic Anhydrase IV/chemistry , Cattle , Enzyme Activators/chemistry , Enzyme Activators/pharmacology , Erythrocytes/drug effects , Erythrocytes/enzymology , Humans , In Vitro Techniques , Models, Molecular , Oligopeptides/chemistry , Oligopeptides/pharmacology , Structure-Activity Relationship
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