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1.
J Basic Microbiol ; 64(7): e2400049, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38715338

ABSTRACT

Endophytic microbial communities colonize plants growing under various abiotic stress conditions. Candelilla (Euphorbia antisyphilitica Zucc.) is a shrub that develops functionally in arid and semi-arid zones of Mexico; these conditions generate an association between the plant and the microorganisms, contributing to the production of enzymes as a defense mechanism for resistance to abiotic stress. The objective of this research was to isolate and identify endophyte fungi of candelilla and bioprospection of these endophytic fungi for enzyme production using candelilla by-products. Fungi were isolated and identified using ITS1/ITS4 sequencing. Their potency index (PI) was evaluated in producing endoglucanase, xylanase, amylase, and laccase. Fermentation was carried out at 30°C for 8 days at 200 rpm, with measurements every 2 days, using candelilla by-products as substrate. All fungi exhibited higher cellulase, amylase, and laccase activities on the 2nd, 6th, and 8th day of fermentation, respectively, of fermentation. The fungus Aspergillus niger ITD-IN4.1 showed the highest amylase activity (246.84 U/mg), the genus Neurospora showed the highest cellulase activity, reaching up to 13.45 FPU/mg, and the strain Neurospora sp. ITD-IN5.2 showed the highest laccase activity (3.46 U/mg). This work provides the first report on the endophytic diversity of E. antisyphilitica and its potential role in enzyme production.


Subject(s)
Bioprospecting , Cellulase , Endophytes , Fermentation , Laccase , Endophytes/isolation & purification , Endophytes/enzymology , Endophytes/metabolism , Endophytes/genetics , Laccase/metabolism , Laccase/biosynthesis , Cellulase/metabolism , Cellulase/biosynthesis , Amylases/metabolism , Aspergillus niger/isolation & purification , Aspergillus niger/enzymology , Mexico , Neurospora , Fungi/isolation & purification , Fungi/enzymology , Fungi/classification , Fungi/genetics
2.
Protein Expr Purif ; 220: 106490, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38697589

ABSTRACT

The production of fermentable sugars from lignocellulosic biomass is achieved by the synergistic action of a group of enzymes called cellulases. Cellulose is a long chain of chemically linked glucoses by ß-1,4 bonds. The enzyme ß-1,4-endoglucanase is the first cellulase involved in the degradation, breaking the bond of the amorphous regions. A ß-1,4-endoglucanase enzyme with high activity was obtained from a Bacillus subtilis strain isolated from wastewater of a pulp and paper mill. Sequencing and bioinformatic analysis showed that the gene amplified by PCR consisting of 1407 nucleotides and coding for a ß-1,4-endoglucanase enzyme of approximately 55 kDa. The open reading frame (ORF) encoding the mature endoglucanase (eglS) was successfully inserted in a modified cloning plasmid (pITD03) and into the pYD1 plasmid used for its expression in yeast. Carboxymethylcellulose (CMC) plate assay, SDS-PAGE, and zymogram confirmed the production and secretion by the transformed E. coli BL21-SI strain of a 39 kDa ß-1,4-endoglucanase consistent with the catalytic domain without the cellulose-binding module (CBM). The results showed that the truncated ß-1,4-endoglucanase had higher activity and stability.


Subject(s)
Bacillus subtilis , Cellulase , Paper , Recombinant Proteins , Wastewater , Bacillus subtilis/genetics , Bacillus subtilis/enzymology , Bacillus subtilis/isolation & purification , Wastewater/microbiology , Wastewater/chemistry , Cellulase/genetics , Cellulase/chemistry , Cellulase/biosynthesis , Cellulase/isolation & purification , Cellulase/metabolism , Recombinant Proteins/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Recombinant Proteins/biosynthesis , Bacterial Proteins/genetics , Bacterial Proteins/chemistry , Bacterial Proteins/isolation & purification , Bacterial Proteins/biosynthesis , Bacterial Proteins/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Cloning, Molecular , Gene Expression
3.
Electron. j. biotechnol ; Electron. j. biotechnol;48: 29-35, nov. 2020. ilus, tab, graf
Article in English | LILACS | ID: biblio-1254696

ABSTRACT

BACKGROUND: Cellulose as a potential feed resource hinders its utilization because of its complex structure, and cellulase is the key to its biological effective utilization. Animal endogenous probiotics are more susceptible to colonization in the intestinal tract, and their digestive enzymes are more conducive to the digestion and absorption of feed in young animals. Min pigs are potential sources of cellulase probiotics because of the high proportion of dietary fiber in their feed. In this study, the cellulolytic bacteria in the feces of Min pigs were isolated and screened. The characteristics of enzymes and cellulase production were studied, which provided a theoretical basis for the rational utilization of cellulase and high-fiber food in animal production. RESULTS: In our study, 10 strains of cellulase producing strains were isolated from Min pig manure, among which the M2 strain had the best enzyme producing ability and was identified as Bacillus velezensis. The optimum production conditions of cellulase from strain M2 were: 2% inoculum, the temperature of 35°C, the pH of 5.0, and the liquid loading volume of 50 mL. The optimum temperature, pH and time for the reaction of cellulase produced by strain M2 were 55°C, 4.5 and 5 min, respectively. CONCLUSIONS: Min pigs can be used as a source of cellulase producing strains. The M2 strain isolated from feces was identified as Bacillus velezensis. The cellulase from M2 strain had a good activity and the potential to be used as feed additive for piglets.


Subject(s)
Animals , Swine, Miniature , Bacteria/enzymology , Cellulase/biosynthesis , Bacillus , Dietary Fiber , Probiotics , Digestion , Feces , Animal Feed
4.
Enzyme Microb Technol ; 139: 109587, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32732036

ABSTRACT

The hydrodynamic environment in bioreactors affects the oxygen transfer rate and the shear conditions during microbial cultivations. Therefore, assessment of the effect of the hydrodynamic environment on cellular morphology can contribute to favoring the production of metabolites of interest. The aim of this work was to use image analysis in order to quantify the fragmentation of Aspergillus niger pellets in a conventional bioreactor operated using different impeller speeds, air flow rates, and impeller configurations including Rushton turbines and Elephant Ear impellers, with evaluation of the influence of the hydrodynamic environment on the production of cellulolytic enzymes. An empirical kinetic model was proposed to describe the dynamics of pellet fragmentation and quantify the shear conditions. The results showed that the agitation speed affected the dynamics of pellet fragmentation in two ways, by accelerating the damage process and by increasing the magnitude of the fragmentation. Both endoglucanase and ß-glucosidase production exhibited a linear relationship with the pellet fragmentation percentage, which was directly related to the shear conditions. Interestingly, ß-glucosidase production was favored under high shear conditions, while the highest endoglucanase production occurred under low shear conditions. These findings may be useful for defining suitable systems and operating conditions for the production of metabolites including enzymes in bioreactors, as well as defining conditions that favour a specific pre-determined enzyme cocktail.


Subject(s)
Aspergillus niger/enzymology , Bioreactors , Cellulase/biosynthesis , beta-Glucosidase/biosynthesis , Fermentation , Hydrodynamics , Kinetics
5.
Appl Biochem Biotechnol ; 192(1): 257-282, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32378080

ABSTRACT

A new cellulase producer strain of Penicillium digitatum (RV 06) was previously obtained from rotten maize grains. This work aim was to optimize the production and characterize this microorganism produced cellulase. A CMCase maximum production (1.6 U/mL) was obtained in stationary liquid culture, with an initial pH of 5.0, at 25 °C, with 1% lactose as carbon source, and cultured for 5 days. The produced enzyme was purified by ammonium sulfate precipitation and exclusion chromatography. The purified enzyme optimal temperature and pH were 60 °C and 5.2, respectively. The experimental Tm of thermal inactivation was 63.68 °C, and full activity was recovered after incubation of 7 h at 50 °C. The purified 74 kDa CMCase presented KM for CMC of 11.2 mg/mL, Vmax of 0.13 µmol/min, kcat of 52 s-1, and kcat/KM of 4.7 (mg/mL)-1 s-1. The purified enzyme had a high specificity for CMC and p-nitrophenyl cellobioside and released glucose and cellobiose as final products of the CMC hydrolysis. The enzyme trypsin digestion produced peptides whose masses were obtained by MALDI-TOF/TOF mass spectrometry, which was also used to obtain two peptide sequences. These peptide sequences and the mass peak profile retrieved a CBHI within the annotated genome of P. digitatum PD1. Sequence alignments and phylogenetic analysis confirmed this enzyme as a CBHI of the glycoside hydrolase family 7. The P. digitatum PD1 protein in silico structural model revealed a coil and ß-conformation predominance, which was confirmed by circular dichroism of the P. digitatum RV 06 purified enzyme.


Subject(s)
Cellobiose/metabolism , Cellulase/biosynthesis , Cellulose 1,4-beta-Cellobiosidase/biosynthesis , Cellulose 1,4-beta-Cellobiosidase/isolation & purification , Fungal Proteins/biosynthesis , Penicillium/enzymology , Circular Dichroism , Enzyme Stability , Genome, Fungal , Glucose/metabolism , Hydrogen-Ion Concentration , Hydrolysis , Kinetics , Phylogeny , Sensitivity and Specificity , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Substrate Specificity , Temperature
6.
Braz J Microbiol ; 51(2): 537-545, 2020 Jun.
Article in English | MEDLINE | ID: mdl-31667801

ABSTRACT

A new strain of Trichoderma reesei (teleomorph Hypocrea jecorina) with high cellulase production was obtained by exposing the spores from T. reesei QM9414 to an ultraviolet light followed by selecting fast-growing colonies on plates containing CMC (1% w/v) as the carbon source. The mutant T. reesei RP698 reduced cultivation period to 5 days and increased tolerance to the end-products of enzymatic cellulose digestion. Under submerged fermentation conditions, FPase, CMCase, and Avicelase production increased up to 2-fold as compared to the original QM9414 strain. The highest levels of cellulase activity were obtained at 27 °C after 72 h with Avicel®, cellobiose, and sugarcane bagasse as carbon sources. The temperature and pH activity optima of the FPase, CMCase, and Avicelase were approximately 60 °C and 5.0, respectively. The cellulase activity was unaffected by the addition of 140 mM glucose in the enzyme assay. When T. reesei RP698 crude extract was supplemented by the addition of ß-glucosidase from Scytalidium thermophilum, a 2.3-fold increase in glucose release was observed, confirming the low inhibition by the end-product of cellulose hydrolysis. These features indicate the utility of this mutant strain in the production of enzymatic cocktails for biomass degradation.


Subject(s)
Cellulase/biosynthesis , Fermentation , Hypocreales/enzymology , Hypocreales/genetics , Biomass , Fungal Proteins/biosynthesis , Hydrolysis , Hypocreales/radiation effects , Mutation , Saccharum , Ultraviolet Rays
7.
Braz. arch. biol. technol ; Braz. arch. biol. technol;63: e20190185, 2020. tab, graf
Article in English | LILACS | ID: biblio-1132193

ABSTRACT

Abstract The second-generation bioethanol employs lignocellulosic materials degraded by microbial cellulases in their production. The fungus Trichoderma reesei is one of the main microorganisms producing cellulases, and its genetic modification can lead to the optimization in obtaining hydrolytic enzymes. This work carried out the deletion of the sequence that encodes the zinc finger motif of the transcription factor ACE1 (cellulase expression repressor I) of the fungus T. reesei RUT-C30. The transformation of the RUT-C30 lineage was confirmed by amplification of the 989 bp fragment relative to the selection marker, and by the absence of the zinc finger region amplification in mutants, named T. reesei RUT-C30Δzface1. The production of cellulases by mutants was compared to RUT-C30 and measured with substrates carboxymethylcellulose (CMC), microcrystalline cellulose (Avicel®) and Whatman filter paper (PF). The results demonstrated that RUT-C30Δzface1 has cellulolytic activity increased 3.2-fold in Avicel and 2.1-fold in CMC and PF. The mutants presented 1.4-fold higher sugar released in the hydrolysis of the biomass assays. These results suggest that the partial deletion of ace1 gene is an important strategy in achieving bioethanol production on an industrial scale at a competitive price in the fuel market.


Subject(s)
Trichoderma/enzymology , Cellulase/biosynthesis , Zinc Fingers , Biomass , Ethanol , Biofuels
8.
Prep Biochem Biotechnol ; 48(8): 743-749, 2018.
Article in English | MEDLINE | ID: mdl-30265206

ABSTRACT

Cellulases constitute an enzymatic complex involved in the cellulose hydrolysis ß-1, 4-glycosidic linkages to release of glucose. Therefore, its application to degrade agro-industrial residues becomes relevant, since glucose is a product of industrial interest, aiming at its conversion into biocommodity production (e.g., enzymes, bioethanol and other value-added biochemicals). Thus, in natura Soybean hulls as well as fractions obtained from its alkaline, autohydrolysis and organosolv pretreatments were used as carbon sources in submerged fermentation processes to evaluate the cellulase-inducing capacity using a Penicillium sp. strain. Results showed an inductive effect on the production of 0.130 and 0.066 U/mL for CMCase and FPase, respectively, using 1% of the in natura residue. Regarding the fraction obtained from soybean hulls pretreated by autohydrolysis and organosolv, avicelase and ß-Glucosidase displayed a production of 0.200 and 0.550 U/mL, respectively. Therefore, the use of pretreated Soybean hull revealed its potential as an alternative carbon source for the cellulase production, which may contribute significantly to biotechnological purposes by adding value to an agro-industrial residue.


Subject(s)
Cellulase/biosynthesis , Fungal Proteins/biosynthesis , Glycine max/chemistry , Penicillium/enzymology , Seeds/chemistry
9.
Methods Mol Biol ; 1796: 273-282, 2018.
Article in English | MEDLINE | ID: mdl-29856060

ABSTRACT

The conversion of renewable lignocellulosic biomass into fuels, chemicals, and high-value materials using the biochemical platform has been considered the most sustainable alternative for the implementation of future biorefineries. However, the high cost of the cellulolytic enzymatic cocktails used in the saccharification step significantly affects the economics of industrial large-scale conversion processes. The on-site production of enzymes, integrated to the biorefinery plant, is being considered as a potential strategy that could be used to reduce costs. In such approach, the microbial production of enzymes can be carried out using the same lignocellulosic biomass as feedstock for fungal development and biofuels production. Most of the microbial cultivation processes for the production of industrial enzymes have been developed using the conventional submerged fermentation. Recently, a sequential solid-state followed by submerged fermentation has been described as a potential alternative cultivation method for cellulolytic enzymes production. This chapter presents the detailed procedure of the sequential cultivation method, which could be employed for the on-site production of the cellulolytic enzymes required to convert lignocellulosic biomass into simple sugars.


Subject(s)
Biochemistry/methods , Cellulase/metabolism , Cellulose/metabolism , Aspergillus/enzymology , Aspergillus/growth & development , Cellulase/biosynthesis
10.
Electron. j. biotechnol ; Electron. j. biotechnol;31: 84-92, Jan. 2018. graf, tab, ilus
Article in English | LILACS | ID: biblio-1022139

ABSTRACT

Background: Cellulolytic enzymes of microbial origin have great industrial importance because of their wide application in various industrial sectors. Fungi are considered the most efficient producers of these enzymes. Bioprospecting survey to identify fungal sources of biomass-hydrolyzing enzymes from a high-diversity environment is an important approach to discover interesting strains for bioprocess uses. In this study, we evaluated the production of endoglucanase (CMCase) and ß-glucosidase, enzymes from the lignocellulolytic complex, produced by a native fungus. Penicillium sp. LMI01 was isolated from decaying plant material in the Amazon region, and its performance was compared with that of the standard isolate Trichoderma reesei QM9414 under submerged fermentation conditions. Results: The effectiveness of LMI01 was similar to that of QM9414 in volumetric enzyme activity (U/mL); however, the specific enzyme activity (U/mg) of the former was higher, corresponding to 24.170 U/mg of CMCase and 1.345 U/mg of ß-glucosidase. The enzymes produced by LMI01 had the following physicochemical properties: CMCase activity was optimal at pH 4.2 and the ß-glucosidase activity was optimal at pH 6.0. Both CMCase and ß-glucosidase had an optimum temperature at 60°C and were thermostable between 50 and 60°C. The electrophoretic profile of the proteins secreted by LMI01 indicated that this isolate produced at least two enzymes with CMCase activity, with approximate molecular masses of 50 and 35 kDa, and ß-glucosidases with molecular masses between 70 and 100 kDa. Conclusions: The effectiveness and characteristics of these enzymes indicate that LMI01 can be an alternative for the hydrolysis of lignocellulosic materials and should be tested in commercial formulations.


Subject(s)
Penicillium/enzymology , Cellulase/biosynthesis , beta-Glucosidase/biosynthesis , Oligosaccharides , Temperature , Trichoderma/enzymology , Enzyme Stability , Cellulase/metabolism , beta-Glucosidase/metabolism , Amazonian Ecosystem , Biocatalysis , Fermentation , Hydrogen-Ion Concentration , Hydrolysis , Lignin/metabolism
11.
J Basic Microbiol ; 58(2): 144-153, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29193198

ABSTRACT

Humicola grisea var. thermoidea (Hgvt) is a thermophilic ascomycete that produces lignocellulolytic enzymes and it is proposed for the conversion of agricultural residues into useful byproducts. Drugs that inhibit the DNA methyltransferases (DNMTs) activity are employed in epigenetic studies but nothing is known about a possible effect on the production of fungal enzymes. We evaluated the effect of 5-aza-2'-deoxycytidine (5-Aza; a chemical inhibitor of DNMTs activity) on the secreted enzyme activity and on the transcription of cellulase and xylanase genes from Hgvt grown in agricultural residues and in glucose. Upon cultivation on wheat bran (WB), the drug provoked an increase in the xylanase activity at 96 h. When Hgvt was grown in glucose (GLU), a repressor of Hgvt glycosyl hydrolase genes, 5-Aza led to increased transcript accumulation for the cellobiohydrolases and for the xyn2 xylanase genes. In WB, 5-Aza enhanced the expression of the transcription factor CreA gene. Growth on WB or GLU, in presence of 5-Aza, led to a significant increase in transcripts of the pH-response regulator PacC gene. To our knowledge, this is the first report on the effect of a DNMT inhibitor in the production of fungal plant cell wall degradation enzymes.


Subject(s)
Azacitidine/analogs & derivatives , Catabolite Repression/drug effects , Cellulase/biosynthesis , Enzyme Inhibitors/metabolism , Enzymes/metabolism , Sordariales/drug effects , Xylosidases/biosynthesis , Azacitidine/metabolism , Decitabine , Gene Expression/drug effects , Glucose/metabolism , Sordariales/growth & development , Triticum/metabolism , Triticum/microbiology
12.
J Appl Microbiol ; 124(3): 708-718, 2018 Mar.
Article in English | MEDLINE | ID: mdl-29253315

ABSTRACT

AIMS: We investigated the role of carbon and nitrogen sources in the production of cellulase and hemicellulase by Aspergillus strains. METHODS AND RESULTS: The strains Aspergillus niger SCBM1 and Aspergillus fumigatus SCBM6 were cultivated under solid-state fermentation (SSF), with biomass sorghum (BS) and wheat bran (WB) as lignocellulosic substrates, in different proportions, along with variable nitrogen sources. The best SSF condition for the induction of such enzymes was observed employing A. niger SCBM1 in BS supplemented with peptone; maximum production levels were achieved as follows: 72 h of fermentation for xylanase and exoglucanase (300·07 and 30·64 U g-1 respectively), 120 h for ß-glucosidase and endoglucanase (54·90 and 41·47 U g-1 respectively) and 144 h for ß-xylosidase (64·88 U g-1 ). CONCLUSIONS: This work demonstrated the viability of the use of BS for the production of hemi- and cellulolytic enzymes; the high concentration of celluloses in BS could be associated with the significant production of cellulases, mainly exoglucanase. SIGNIFICANCE AND IMPACT OF THE STUDY: This is the first study which presents the promising use of biomass sorghum (genetically modified sorghum to increase its biomass content) as an alternative carbon source for the production of enzymes by SSF.


Subject(s)
Aspergillus fumigatus/metabolism , Aspergillus niger/metabolism , Cellulase/biosynthesis , Fermentation , Glycoside Hydrolases/biosynthesis , Sorghum/metabolism , Biomass , Cellulases/metabolism , Cellulose/metabolism , Dietary Fiber/metabolism , Xylosidases/metabolism , beta-Glucosidase/metabolism
13.
An Acad Bras Cienc ; 89(3 Suppl): 2359-2370, 2017.
Article in English | MEDLINE | ID: mdl-29044330

ABSTRACT

During composting processes, the degradation of organic waste is accomplished and driven by a succession of microbial populations exhibiting a broad range of functional competencies. A total of 183 bacteria, isolated from a composting process, were evaluated for cellulase activity at different temperatures (37, 50, 60, and 70°C) and pH values. Out of the 22 isolates that showed activity, isolate 380 showed the highest cellulase activity. Its ability to produce cellulase was evaluated in culture medium supplemented with carboxymethyl cellulose, microcrystalline cellulose, wheat straw, and rice husk. The culture medium supplemented with carboxymethyl cellulose induced higher enzyme activity after 6 hours of incubation (0.12 UEA mL-1 min-1). For wheat straw and rice husk, the results were 0.08 UEA mL-1 min-1 for both, while for microcrystalline cellulose, 0.04 UEA mL-1 min-1 were observed. The highest carboxymethyl cellulase activity was observed at 60°C (0.14 UEA mL-1 min-1) for both crude and partially purified enzyme after 30 and 120 min of incubation, respectively. Alkalinization of the medium was observed during cultivation in all substrates. The cellulase had a molecular mass of 20 kDa determined by SDS-Page. Isolate 380 was identified as Bacillus licheniformis. This work provides a basis for further studies on composting optimization.


Subject(s)
Bacillus licheniformis/enzymology , Carboxymethylcellulose Sodium/pharmacology , Cellulase/biosynthesis , Cellulase/isolation & purification , Culture Media/pharmacology , Bacillus licheniformis/drug effects , Electrophoresis, Polyacrylamide Gel , Hot Temperature , Substrate Specificity
14.
J Microbiol ; 55(9): 711-719, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28865071

ABSTRACT

The objective of this study was to evaluate the potential of eight fungal isolates obtained from soils in rice crops for straw degradation in situ. From the initial eight isolates, Pleurotus ostreatus T1.1 and Penicillium sp. HC1 were selected for further characterization based on qualitative cellulolytic enzyme production and capacity to use rice straw as a sole carbon source. Subsequently, cellulolytic, xylanolytic, and lignolytic (Pleurotus ostreatus) activity on carboxymethyl cellulose, oat xylan, and rice straw with different nitrogen sources was evaluated. From the results obtained it was concluded both isolates are capable to produce enzymes necessary for rice straw degradation. However, their production is dependent upon carbon and nitrogen source. Last, it was established that Pleurotus ostreatus T1.1 and Penicillium sp. HC1 capability to colonize and mineralize rice straw, in mono-and co-culture, without affecting nitrogen soil content.


Subject(s)
Cellulase/biosynthesis , Cellulose/metabolism , Fungi/metabolism , Oryza/metabolism , Soil Microbiology , Biodegradation, Environmental , Carbon/metabolism , Cellulase/metabolism , Fungi/classification , Fungi/enzymology , Fungi/isolation & purification , Hydrolysis , Lignin/metabolism , Penicillium/enzymology , Penicillium/isolation & purification , Penicillium/metabolism , Plant Stems/metabolism , Pleurotus/enzymology , Pleurotus/isolation & purification , Pleurotus/metabolism
15.
Biochim Biophys Acta Proteins Proteom ; 1865(4): 395-403, 2017 Apr.
Article in English | MEDLINE | ID: mdl-28088615

ABSTRACT

The cellulases from Glycoside Hydrolyses family 12 (GH12) play an important role in cellulose degradation and plant cell wall deconstruction being widely used in a number of bioindustrial processes. Aiming to contribute toward better comprehension of these class of the enzymes, here we describe a high-yield secretion of a endoglucanase GH12 from Aspegillus terreus (AtGH12), which was cloned and expressed in Aspergillus nidulans strain A773. The purified protein was used for complete biochemical and functional characterization. The optimal temperature and pH of the enzyme were 55°C and 5.0 respectively, which has high activity against ß-glucan and xyloglucan and also is active toward glucomannan and CMC. The enzyme retained activity up to 60°C. AtGH12 is strongly inhibited by Cu2+, Fe2+, Cd2+, Mn2+, Ca2+, Zn2+ and EDTA, whereas K+, Tween, Cs+, DMSO, Triton X-100 and Mg2+ enhanced the enzyme activity. Furthermore, SAXS data reveal that the enzyme has a globular shape and CD analysis demonstrated a prevalence of a ß-strand structure corroborating with typical ß-sheets fold commonly found for other endoglucanases from GH12 family.


Subject(s)
Aspergillus , Cellulase , Cloning, Molecular , Fungal Proteins , Gene Expression , Aspergillus/enzymology , Aspergillus/genetics , Cellulase/biosynthesis , Cellulase/chemistry , Cellulase/genetics , Fungal Proteins/biosynthesis , Fungal Proteins/chemistry , Fungal Proteins/genetics , Recombinant Proteins
16.
An. acad. bras. ciênc ; 89(3,supl): 2359-2370, 2017. tab, graf
Article in English | LILACS | ID: biblio-886801

ABSTRACT

ABSTRACT During composting processes, the degradation of organic waste is accomplished and driven by a succession of microbial populations exhibiting a broad range of functional competencies. A total of 183 bacteria, isolated from a composting process, were evaluated for cellulase activity at different temperatures (37, 50, 60, and 70°C) and pH values. Out of the 22 isolates that showed activity, isolate 380 showed the highest cellulase activity. Its ability to produce cellulase was evaluated in culture medium supplemented with carboxymethyl cellulose, microcrystalline cellulose, wheat straw, and rice husk. The culture medium supplemented with carboxymethyl cellulose induced higher enzyme activity after 6 hours of incubation (0.12 UEA mL-1 min-1). For wheat straw and rice husk, the results were 0.08 UEA mL-1 min-1 for both, while for microcrystalline cellulose, 0.04 UEA mL-1 min-1 were observed. The highest carboxymethyl cellulase activity was observed at 60°C (0.14 UEA mL-1 min-1) for both crude and partially purified enzyme after 30 and 120 min of incubation, respectively. Alkalinization of the medium was observed during cultivation in all substrates. The cellulase had a molecular mass of 20 kDa determined by SDS-Page. Isolate 380 was identified as Bacillus licheniformis. This work provides a basis for further studies on composting optimization.


Subject(s)
Carboxymethylcellulose Sodium/pharmacology , Cellulase/isolation & purification , Cellulase/biosynthesis , Culture Media/pharmacology , Bacillus licheniformis/enzymology , Substrate Specificity , Electrophoresis, Polyacrylamide Gel , Bacillus licheniformis/drug effects , Hot Temperature
17.
J Ind Microbiol Biotechnol ; 43(5): 617-26, 2016 May.
Article in English | MEDLINE | ID: mdl-26883662

ABSTRACT

The use of glycerol obtained as an intermediate of the biodiesel manufacturing process as carbon source for microbial growth is a potential alternative strategy for the production of enzymes and other high-value bioproducts. This work evaluates the production of cellulase enzymes using glycerol for high cell density growth of Trichoderma harzianum followed by induction with a cellulosic material. Firstly, the influence of the carbon source used in the pre-culture step was investigated in terms of total protein secretion and fungal morphology. Enzymatic productivity was then determined for cultivation strategies using different types and concentrations of carbon source, as well as different feeding procedures (batch and fed-batch). The best strategy for cellulase production was then further studied on a larger scale using a stirred tank bioreactor. The proposed strategy for cellulase production, using glycerol to achieve high cell density growth followed by induction with pretreated sugarcane bagasse, achieved enzymatic activities up to 2.27 ± 0.37 FPU/mL, 106.40 ± 8.87 IU/mL, and 9.04 ± 0.39 IU/mL of cellulase, xylanase, and ß-glucosidase, respectively. These values were 2 times higher when compared to the control experiments using glucose instead of glycerol. This novel strategy proved to be a promising approach for improving cellulolytic enzymes production, and could potentially contribute to adding value to biomass within the biofuels sector.


Subject(s)
Bioreactors , Cellulase/biosynthesis , Cellulose/metabolism , Glycerol/metabolism , Trichoderma/growth & development , Trichoderma/metabolism , Biofuels , Biomass , Cellulose/pharmacology , Glucose/metabolism , Glucose/pharmacology , Glycerol/pharmacology , Saccharum/chemistry , Trichoderma/cytology , Trichoderma/enzymology , beta-Glucosidase/metabolism
18.
Electron. j. biotechnol ; Electron. j. biotechnol;19(1): 23-28, Jan. 2016. ilus
Article in English | LILACS | ID: lil-781166

ABSTRACT

Background: Lignocellulosic biomass is a renewable, abundant, and inexpensive resource for biorefining process to produce biofuel and valuable chemicals. To make the process become feasible, it requires the use of both efficient pretreatment and hydrolysis enzymes to generate fermentable sugars. Ionic liquid (IL) pretreatment has been demonstrated to be a promising method to enhance the saccharification of biomass by cellulase enzyme; however, the remaining IL in the hydrolysis buffer strongly inhibits the function of cellulase. This study aimed to isolate a potential IL-tolerant cellulase producing bacterium to be applied in biorefining process. Result: One Bacillus sp., MSL2 strain, obtained from rice paddy field soil was isolated based on screening of cellulase assay. Its cellulase enzyme was purified and fractionated using a size exclusion chromatography. The molecular weight of purified cellulose was 48 kDa as revealed by SDS-PAGE and zymogram analysis. In the presence of the IL, 1-ethyl-3-methylimidazolium acetate ([C2mim][OAc]) concentration of 1 M, the cellulase activity retained 77.7% of non-IL condition. In addition, the optimum temperature and pH of the enzyme is 50°C and pH 6.0, respectively. However, this cellulase retained its activity more than 90% at 55°C, and pH 4.0. Kinetic analysis of purified enzyme showed that the Km and Vmax were 0.8 mg/mL and 1000 μM/min, respectively. Conclusion: The characterization of cellulase produced from MSL2 strain was described here. These properties of cellulase made this bacterial strain become potential to be used in the biorefining process.


Subject(s)
Bacillus/enzymology , Cellulase/isolation & purification , Cellulase/biosynthesis , Oryza , Soil Microbiology , Temperature , Bacillus/metabolism , Biomass , Ionic Liquids , Biofuels , Hydrogen-Ion Concentration , Hydrolysis , Lignin
19.
Lett Appl Microbiol ; 61(6): 588-95, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26394238

ABSTRACT

UNLABELLED: Coffee is among the most preferred nonalcoholic drinks, and its consumption is distributed globally. During the coffee fruiting process, however, a large amount of waste is generated in the form of pulp, mucilage, husks, and water waste. The pulp and mucilage have the chemical composition to support the growth of micro-organisms and the production of value-added product. The aim was testify pulp coffee can be considered as carbon and inductor source for ß-glucosidase by Bacillus subtilis CCMA 0087. The response surface methodology (RSM) based on a central composite rotatable design (CCRD) was employed for this optimization. The methodology used in the optimization process was validated by testing the best conditions obtained and comparing them with the values predicted by the model. The highest ß-glucosidase production (22·59 UI ml(-1) ) was reached in 24 h of culturing at coffee pulp concentration of 36·8 g l(-1) , temperature of 36·6°C, and pH of 3·64. SIGNIFICANCE AND IMPACT OF THE STUDY: Countries whose economy is based on agricultural activities generate a great deal of liquid and solid waste. Thus, it is important to develop new alternatives for using this waste rather than disposing it in the environment. The production of enzymes, and particularly cellulase, is one such alternative. In this study, we proposed to produce ß-glucosidase production from pulp coffee extract using a Bacillus subtilis strain.


Subject(s)
Bacillus subtilis/metabolism , Bioreactors/microbiology , Coffee/metabolism , Plant Mucilage/metabolism , beta-Glucosidase/biosynthesis , Carbon , Cellulase/biosynthesis , Fermentation , Hydrogen-Ion Concentration , Temperature , Waste Products
20.
Genet Mol Res ; 14(2): 6439-52, 2015 Jun 11.
Article in English | MEDLINE | ID: mdl-26125849

ABSTRACT

Heterologous expression of Aspergillus niger endo-1,4-ß-glucanase (ENG1) in Saccharomyces cerevisiae was tested both with an episomal plasmid vector (YEGAp/eng1) and a yeast vector capable of integration into the HO locus of the S. cerevisiae chromosome (pHO-GAPDH-eng1-KanMX4-HO). In both cases, eng1 gene expression in yeast, with its native signal sequence for secretion, was under the control of the strong glyceraldehyde 3-phosphate dehydrogenase (GAPDH) promoter. We aimed to verify how each expression system affects protein expression, posttranslational modification, and biochemical properties. Expression of eng1 from the episomal plasmid vector YEGAp/eng1 significantly slowed the growth of a yeast cell culture. However, expression of eng1 from the vector integrated into the HO locus of the chromosome did not cause growth suppression, and the enzyme activity in a culture supernatant was maintained throughout the incubation time. ENG1 has optimum catalytic activity at pH 6.0, and is stable in the pH range 5.0-9.0. The enzyme's optimum temperature for catalytic activity at pH 6.0 is 70°C; importantly, more than 95% of the enzyme's initial activity remained after a 2-h incubation at 60°C. The biochemical characterization of ENG1 confirmed the correct expression of the protein and showed that ENG1 expressed by the pHO-GAPDH-eng1-KanMX4-HO vector, in addition to its N-linked sites, is overglycosylated at its O-glycosylation sites compared with ENG1 expressed by the YEGAp/eng1 vector. It is likely that the O-glycosylated form of the A. niger ENG1 retains more stable activity during continuous cultivation of recombinant yeasts than the form that is only N-glycosylated.


Subject(s)
Aspergillus niger/genetics , Cellulase/biosynthesis , Saccharomyces cerevisiae/genetics , Aspergillus niger/enzymology , Cellulase/genetics , Cloning, Molecular , Deoxyribonucleases, Type II Site-Specific/genetics , Gene Expression Regulation, Fungal , Genetic Vectors , Glycosylation , Plasmids/genetics , Promoter Regions, Genetic , Saccharomyces cerevisiae Proteins/genetics
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