Altered performance of white sucker populations in the Manitouwadge chain of lakes is associated with changes in benthic macroinvertebrate communities as a result of copper and zinc contamination.

White sucker (Catostomus commersoni) collected from the Manitouwadge chain of lakes show a lower growth rate and fecundity in lakes contaminated with copper and zinc from a mixed metal mine. This study evaluated whether the changes in performance of the fish were related to direct impacts of the metals or indirect impacts associated with changes in food availability. Concentrations of metals in the water and sediment of lakes in the Manitouwadge chain were elevated, relative to reference sites. The concentrations of Cu and Zn in the digesta of white sucker were significantly higher, as were the levels of both Cu and Zn in liver, kidney, and gill tissue. Muscle and spleen levels of Cu and Zn were significantly lower or not different from controls. Tissue levels were within the homeostatic range for Cu and Zn. However, the total density of invertebrates varied from greater than 25,000 m-2 at control sites to less than 13,000 m-2 at contaminated sites, and the number of genera recorded was more than 50% lower in shallow water samples. There was almost a complete absence of several invertebrate taxa at contaminated sites, including Plecoptera, Ephemeroptera, Odonata, Trichoptera, Amphipoda, and Unionidae. Diptera accounted for 78 to 96% of the total numbers of individuals at metal-contaminated sites as compared with 40 to 75% at the control sites. An analysis of white sucker stomach contents showed that the contents closely reflected the benthic composition observed in the natural substrate. Changes in food availability and feeding activity were correlated with previous changes documented in the growth, fecundity, and lipid levels of white sucker.

Histone H1 heterogeneity in the midge, Chironomus thummi. Structural comparison of the H1 variants in an organism where their intrachromosomal localization is possible.

1. Seven subfractions of histone H1 have been isolated and purified from larvae of Chironomus thummi (Diptera). They have been denominated I-1, II-1, II-2, II-3, III-1, III-2, and III-3, according to the order of migration in two steps of preparative electrophoresis. 2. The amino acid compositions are similar to those of other H1 histones. Subfractions I-1 and II-1 were found to contain one methionine and two tyrosine residues, II-2 contained two methionine and three tyrosine residues, and III-1 one methionine and three tyrosine residues. The other subfractions contained one or two methionine and two or three tyrosine residues. For subfractions I-1 and II-1 a chain length of about 252 amino acids was estimated. 3. Peptide pattern analyses after chemical cleavage at the methionine and tyrosine residues, and enzymatic cleavage with thrombin and chymotrypsin, respectively, showed that all subfractions have different individual primary structures. A comparison of peptide sizes and of the positions in the peptide patterns of epitopes recognized by monoclonal antibodies was made to check whether some of the subfractions could arise by proteolytic degradation of others. This possibility can be excluded for five of the subfractions and is very improbable for the two others. Treatment of C. thummi H1 with alkaline phosphatase did not change the pattern of subfractions, while the phosphorylated subfraction of histone H2A disappeared after this treatment. Most and very probably all subfractions are thus H1 sequence variants. 4. Inbred strains and individual larvae of C. thummi were found to comprise all seven variants. The H1 heterogeneity can therefore not be due to allelic polymorphism. Salivary gland nuclei were found to contain variant I-1 and at least some of the other variants. 5. H1 from Drosophila melanogaster and from calf thymus were used as reference molecules in all cleavage experiments and yielded the peptide patterns expected from the sequence. The comparison discriminates the group of C. thummi H1 histones clearly from Drosophila and calf thymus H1. Limited trypsin digestion yielded a protected peptide of uniform size in six of the seven variants which was considerably smaller than the protected central domain of calf thymus H1. 6. Two other species of Chironomidae, C. pallidivittatus and Glyptotendipes barbipes were found to contain five and three H1 subfractions, respectively.(ABSTRACT TRUNCATED AT 400 WORDS)

A blotting procedure which preserves specific protein-DNA interactions.

A quick, quantitative, and nonselective electrophoretic transfer of proteins from acetic acid-urea gels onto nitrocellulose, which preserves their ability to interact specifically with DNA, is achieved when exposure to dodecyl sulfate ions is avoided and a special type of nitrocellulose is used which contains cellulose phosphate ester. Filter-adsorbed histone H1 and other nuclear proteins from an insect, Chironomus thummi, were tested for binding of an AT-rich DNA sequence from the heterochromatin of the same organism under competitive conditions. On the blots, histone H1 exhibited the dependency of DNA binding on NaCl concentration and the preference for AT-rich DNA or poly[d(A-T)] found in quantitative filter-binding studies. By stepwise alteration of the NaCl molarity and competing Escherichia coli DNA concentration, respectively, in the binding buffer, two minor protein fractions could be identified in the heterogeneous extracts, one of which bound preferentially to AT-rich DNA, and the other bound to this sequence at up to 500 mM NaCl. Exposure to dodecyl sulfate led to a disappearance of the ability of these proteins to interact specifically with DNA. While nondenaturing transfer by diffusion (L. Levinger and A. Varshavsky (1982) Proc. Natl. Acad. Sci. USA 79, 7152) is a procedure that requires about 2 days, the present technique of gentle protein transfer for DNA binding studies requires only 2 to 3 h.

Haem-rotational disorder in monomeric allosteric cyano-Met insect haemoglobins monitored by resonance Raman spectroscopy.

The haem-rotational disorder (insertion of haem into globin rotated about the alpha, gamma-meso axis by 180 degrees) has been investigated in the cyano-Met form of the monomeric allosteric insect haemoglobins, CTT III and CTT IV, by resonance Raman spectroscopy. The effect of haem disorder on the resonance Raman spectra has been observed in proto-IX, deutero-IX, and meso-IX CTTs. Most importantly, in the absence of overlapping vinyl vibrations, we have identified two Fe-C-N bending vibrations at 401 cm-1 and 422 cm-1 (pH 9.5) for 57Fe deutero-IX CTT IV ligated with 13C15N-, which are attributed to the two haem-rotational components. One Fe-C-N bending mode at 422 cm-1 shows a pH-induced shift to 424 cm-1 (pH 5.5) indicating the t----r conformational transition, whereas the other bending mode is pH-insensitive, representing a non-allosteric component. By replacing the unsymmetrical porphyrins with the "symmetrical" protoporphyrin-III we eliminate the haem disorder. Then, sharpening of the Fe-N epsilon(His) (at 313 cm-1) and Fe-CN (at 453 cm-1) stretching modes is observed and a single Fe-C-N bending mode (at 412 cm-1) appears. In cyano-Met proto-IX CTT III two vinyl bending vibrations at 412 cm-1 and 591 cm-1 assigned by deuteration of the vinyl groups also reflect the haem disorder. The 412 cm-1 vinyl vibration is intensity-enhanced via through-space coupling with one of the Fe-C-N bending modes (at 412 cm-1). In the cyano-Met form of proto-III CTT III this vinyl vibration is shifted to 430 cm-1 resulting in a dramatic drop in intensity. It is most likely that the specific vinyl-protein interaction at position 4 in one of the haem-rotational components is the origin of the coupling between the Fe-C-N and vinyl bending modes. The Fe-N epsilon(proximal His) and the Fe-CN stretching vibrations as well as the Fe-C-N bending vibration have been identified by 54Fe/57Fe and 13C15N/12C15N/13C14N/12C14N isotope exchange.

Proton-magnetic-resonance investigation of the dynamics of the conformational transition in allosteric monomeric insect hemoglobins.

1H-NMR spectra of the monomeric insect (Chironomus thummi thummi) hemoglobins CTT III and CTT IV were investigated in the pH range 5-10 to gain insight into the dynamics of the tense to relaxed (t in equilibrium r) conformational transition in the deoxy (at 200 MHz) and cyano-met (at 360 MHz) form. These hemoglobins exhibit a pH-sensitive O2 affinity (Bohr effect) which is linked to the conformational transition. Both hemoglobins are comprised of two components which show heme rotational disorder due to a 180 degrees rotation of the heme group about the alpha,gamma-meso axis. The heme rotational components differ remarkably in their Bohr effects [Gersonde, K. et al. (1986) Eur. J. Biochem. 157, 393-404]. Several of the hyperfine-shifted heme proton resonances in these hemoglobin derivatives show pH-induced line-broadening which is largest at pK = 7.46 (for the heme rotational component with large Bohr effect) or pK = 7.06 (for the heme rotational component with small Bohr effect) determined from the plots of chemical shift versus pH. The line broadening at pK approximately equal to 7.5, shown for the heme rotational component of cyano-met CTT IV with the largest Bohr effect, decreases in the following order in parallel with the pH-induced shift change: 4-H beta-c (1.20 ppm) greater than 3-CH3 (0.80 ppm) approximately greater than 4H alpha (0.76 ppm) approximately greater than 4H beta-t (0.73 ppm) greater than 8-CH3 (0.35 ppm). Decrease in temperature at the pK value also leads to line-broadening. At 4 degrees C the hyperfine-shifted resonance attributed to 3-CH3 is split into two resonances assigned to the t (low-pH form) and r (high-pH form) conformation, respectively. This temperature dependence confirms the t in equilibrium r exchange process as the origin of the pH-induced line-broadening. The Bohr proton exchange rate at the allosteric site is orders of magnitude larger than the t in equilibrium r exchange rate. Therefore, the proton-linked t in equilibrium r transition appears as a first-order reaction. The rate constant ktr for the t in equilibrium r transition at the pK in different hemoglobin derivatives ranges over 0.2-7 ms-1. Surprisingly, ktr is identical for deoxy and cyano-met CTT IV.(ABSTRACT TRUNCATED AT 400 WORDS)

Mechanism of the control of dioxygen binding in a dimeric cobalt-substituted insect hemoglobin. Resonance Raman evidence for cobalt-axial-ligand bond changes.

Resonance Raman spectroscopy has been used to investigate the allosteric control mechanism for O2 binding in a cobalt-substituted dimeric insect hemoglobin (CTT II), which exhibits a large Bohr effect due to a pH-induced transition between two ligand affinity states. Substitution of cobalt for iron in CTT II does not modify the Bohr effect, but permits the resonance enhancement (hence the detection) of Raman lines corresponding to the vibrations of the axial ligand-cobalt bonds. Using 16O2/18O2 isotope substitution the O-O and Co-O2 stretching and the Co-O-O bending mode have been assigned to the two affinity states of this hemoglobin: v (O-O) changes from 1152 cm-1 (pH 5.5; t conformation) to about 1125 cm-1 (pH 9.5, r conformation), v (Co-O2) from 512 cm-1 (pH 5.5) to 537 cm-1 (pH 9.5) and delta (Co-O-O) from 378 cm-1 (pH 5.5) to 390 cm-1 (pH 9.5). The Co-N epsilon (His) stretching mode has also been detected changing from 313 cm-1 (pH 5.5) to 307 cm-1 (pH 9.5). For the first time, reciprocal behaviour between the Co-N epsilon and Co-O2 bonds and between the Co-O2 and the O-O bonds in an allosteric hemoglobin are demonstrated. Furthermore, the pH sensitivity of a vinyl bending mode in the range of 411-415 cm-1 has been investigated and shown also to reflect the t in equilibrium with r conformation transition.

Iron-histidine stretching vibration in the deoxy state of insect hemoglobins with different O2 affinities and Bohr effects.

Resonance Raman spectroscopy has been employed to detect the iron-proximal histidine stretching mode in deoxyhemoglobins from insect larvae of Chironomus thummi thummi (CTT). With the excitation of 413.1 nm, we observe a sharp and intense line in the 220-224 cm-1 region. The assignment of this line to the Fe-N epsilon (His) stretching mode was made on the basis of a 3-cm-1 shift upon 57Fe/54Fe isotope substitution. The Fe-N epsilon (His) vibration is used to monitor the possible changes in the Fe-N epsilon (His) bond strength (hence bone length) in the deoxy state of the monomeric (CTT I, III, and IV) and dimeric (CTT II) insect hemoglobins. As these hemoglobins differ in O2 affinity, off-rate and on-rate constants, and in the Bohr effect, they are excellent model systems for investigating the mechanism of protein control of the heme reactivity. Some of these hemoglobins (CTT III, IV, and II) are allosteric, exhibiting two interconvertible conformational states with high and low O2 affinity at high and low pH, respectively. The Fe-N epsilon (His) stretching frequency does not correlate with the O2 affinity, the on-rate and the off-rate constants for different hemoglobins, for different conformational states, and for modified hemoglobins with different heme peripheral groups. This vibrational mode is insensitive to deuteration of the heme vinyl groups. It is important to note that the Fe-N epsilon (His) bonds in the high pH (high-affinity) and the low pH (low-affinity) states are identical. This implies that the O2 molecule, prior to binding, "sees" identical binding sites. Thus, the difference in free energy changes upon O2 binding is manifested only in the oxy form.

Immunofluorescence localization of Z-DNA in chromosomes: quantitation by scanning microphotometry and computer-assisted image analysis.

Anti-Z-DNA polyclonal and monoclonal immunoglobulins raised against left-handed polynucleotides show various degrees of specificity for base sequence and substitution. Class 1 IgGs recognize all Z-DNA with equal affinity; class 2 IgGs show a preference for d(G-C)n sequences and class 3 IgGs for d(G-C)n sequences with substitutions at the C5 position of the pyrimidine. These antibodies served as probes for the localization of Z-DNA in polytene and metaphase chromosomes and in interphase chromatin by indirect immunofluorescence. A quantitative assessment of the binding of anti-Z-DNA IgGs to polytene chromosomes of Chironomus and Drosophila was made by scanning microphotometry and by computer-assisted image analysis of double immunofluorescence and DNA-specific dye fluorescence images. The three classes of antibodies bind to most of the bands in acid fixed polytene chromosomes of C. thummi; however, preferential binding of one class of antibody over another can be observed in certain regions. These differences can be quantitated by arithmetic division or subtraction of the normalized digital images. If a class 2 antibody is first bound at saturating concentrations the binding of class 1 antibody is reduced throughout most bands by 40-50%. However, the telomeres of the three large chromosomes bind greater than 10 times as much class 1 antibody as class 2 antibody, indicating that the Z-DNA tracts in these regions are comprised largely of alternating sequences containing the A X T basepair, e.g., A-C. High-resolution image analysis of class 1 and class 2 immunofluorescence patterns and the total DNA distribution from polytene chromosomes of D. melanogaster show that the two antibody distributions are very similar in a large majority of the bands, but they often deviate from the mean DNA distribution profile. Z-DNA sequences of both G-C and A-C type are detectable at all levels of ploidy from 2n to 2(13)n and in species as diverse as insects and man. We conclude that the vast majority of polytene chromosome bands (genes) contain one or a few DNA sequences with potential for undergoing the B----Z transition and contain both alternating purine-pyrimidine G-C and A-C tracts or mixed sequences. Highly heterochromatic bands and telomeres have more Z potential sequences than do other bands.

Iron-carbon bond lengths in carbonmonoxy and cyanomet complexes of the monomeric hemoglobin III from Chironomus thummi thummi: a critical comparison between resonance Raman and x-ray diffraction studies.

Soret-excited resonance Raman spectroscopy yields direct information regarding the iron-carbon bonding interactions in the cyanomet and carbonmonoxy complexes of hemoglobin III from Chironomus thummi thummi (CTT III) in solution. By isotope exchange in cyanide (13CN-, C15N-, and 13C15N-) and carbon monoxide (13CO, C18O, and 13C18O), we have assigned the Fe(III)-CN- stretching at 453 cm-1, the Fe(III)-C-N- bending at 412 cm-1, the Fe(II)-CO stretching at 500 cm-1, the Fe(II)-C-O bending at 574 cm-1, and the C-O stretching at 1960 cm-1. The resonance Raman data, in conjunction with those obtained from heme model complexes with well-known Fe-C bond distances, strongly suggest that the Fe(III)-CN- bond (approximately 1.91 A) is longer (hence weaker) than the Fe(II)-CO bond (approximately 1.80 A). This result disagrees with those of x-ray crystallographic studies [Steigemann, W. & Weber, E. (1979) J. Mol. Biol. 127, 309-338] in which the Fe-C bond lengths were reported as 2.2 A in cyanomet and 2.4 A in carbonmonoxy CTT III. Based on Badger's rule and normal mode calculations, the x-ray data would lead to the prediction of 279 cm-1 for the Fe(II)-CO stretching frequency in CTT III . CO, which was not observed. On the other hand, we estimate the Fe-CO bond as approximately equal to 1.82 A, which is very similar to the 1.80-A value in human Hb . CO crystals. Furthermore, we have used isotope shift data to estimate the Fe-C-O angle as 169 +/- 5 degrees, somewhat larger than the 161 degrees value found by Steigemann and Weber. We therefore conclude that there must be errors in the x-ray crystallographic refinement for the ligand geometry in carbonmonoxy and cyanomet CTT III.

Isolation and characterization of the two giant secretory proteins in salivary gland of Chironomus tentans.

The two giant secretory proteins, sp-Ia and sp-Ib, in salivary-gland cells of the larva of the fly Chironomus tentans, were isolated by preparative gel electrophoresis and characterized chemically. Their amino acid compositions are dominated by polar amino acids, with about 30% of basic amino acid residues. Crossed immunoelectrophoresis of sp-Ia and sp-Ib provided evidence that they share antigenic determinants. They also have major methionine-containing tryptic peptides in common. CNBr cleavage of sp-Ib gives a small number of low-Mr fragments, indicating that this protein has a repetitive structure.

Proton nuclear magnetic resonance investigation of the nature of solution conformational equilibria of monomeric insect deoxyhemoglobins.

The proton nuclear magnetic resonance spectra of the three monomeric deoxyhemoglobins of the insect larva Chironomus thummi thummi have been recorded, assigned, and analyzed. In the two allosteric hemoglobins, the heme methyls and vinyl protons were assigned by specific deuterium labeling. The hyperfine-shifted proximal histidyl imidazole exchangeable protons for the three native and two deuteroheme-reconstituted hemoglobins were assigned by comparison of spectra in H2O and 2H2O. Both native and reconstituted allosteric hemoglobins exhibit two sets of interconvertible resonances indicative of two heme orientations differing by a 180 degrees rotation about the alpha-gamma-meso axis, as previously found for the met-cyano analogues [La Mar, G. N., Smith, K. M., Gersonde, K., Sick, H., & Overkamp, M. (1980) J. Biol. Chem. 255, 66]. The relative pH sensitivities of the heme resonance hyperfine shifts for the two allosteric hemoglobins and the apparent pK approximately 8 indicate that the t in equilibrium r allosteric transition, as modulated by the Bohr proton, is being observed. For the native hemoglobins, the t in equilibrium r conformational transition was found to be centered at the heme periphery, with the proximal histidyl imidazole environment insensitive to both pH and the rotational position of the heme, consistent with the absence of a pH influence on the ligation on-rate. For the deuteroheme-reconstituted allosteric hemoglobins, both the heme and axial imidazole environments sense the t in equilibrium r transition, and the histidine environments for the two components for each hemoglobin can be clearly distinguished, suggesting that the ligation on-rates may depend on both pH and heme orientation.

[Hemoglobins XL: Sequence analysis of the monomeric hemoglobin CTT IV (erythrocruorin) of Chironomus thummi thummi, Diptera (author's transl)]. / Hämoglobine, XL. Sequenzanalyse des monomeren Insektenhämoglobins CTT IV (Erythrocruorin) aus Chironomus thummi thummi (Diptera).

The sequence analysis of the monomeric hemoglobin CTT IV is given. The primary structure was determined by automatic Edman degradation of the protein and of peptides obtained by enzymatical or by chemical cleavages. The protein chain consists of 136 amino acids. The primary structure is compared with the primary structure of the human beta-chains and of the monomeric hemoglobin CTT III.

[Hemoglobins, XXXIX. Amino acid sequence of a dimeric hemoglobin (erythrocruorin) from Chironomus thummi thummi: component CTT VIII]. / Hämoglobine, XXXIX. Aminosäuresequenz eines dimeren Hämoglobins (Erythrocruorin) von Chironomus thummi thummi: Komponente CTT VIII.

The globin of the homo-dimeric hemoglobin CTT VIII was isolated by chromatography of the CTT-hemoglobins on DEAE-cellulose and rechromatography of the crude CTT VIII globin on CM-cellulose. The sequence was established by automatic degradation of the globin, tryptic peptides derived from various limited tryptic digestions and one cyanogen bromide peptide. As an additional proof of the C-terminal sequence splitting with carboxypeptidase was carried out. The tryptic activity was limited by chemical modification of the epsilon-amino groups of the lysines nd the delta-guanidino groups of the arginines, respectively. A reduction of the tryptic fragments from the maleylated globin was achieved by special digestion conditions: high pH value and short digestion time. The hemoglobin consists of 2 X 151 residues with a molecular weight of 32438. The structure of CTT VIII is homologously aligned with a monomeric CTT-hemoglobin (CTT III) and the human-beta-chain. There is a conformity of 39.7% to the CTT III-hemoglobin and 13.9% to the human beta-chains. All three hemoglobins are identical in 12 positions only. The secondary structures are postulated according to the CTT III-component. Possible structural differences are discussed.

[Hemoglobins, XXXVI: The primary structure of a dimeric insect hemoglobin (Erythrocruorin), component IX from Chironomus thummi thummi. Studies on the quarternary structure of the dimeric CTT-hemoglobins (author's transl)]. / Hämoglobine, XXXVI[1,2] Die Primärstruktur eines dimeren Insektenhämoglobins (ERythrocruorin) (CTT IX) (Chironomus thummi thummi. Versuche zur Quartärstruktur der dimeren CTT-Hämoglobine.

The primary structure of a dimeric insect hemoglobin (erythrocruorin), component CTT IX (Chironomus thummi thummi) was established by automatic sequence analysis. The alignment of the peptides was facilitated by producing only a few large fragments. The primary structure of CTT IX is compared with the human beta-chains and with CTT III. It is discussed, why for the dimeric CTT-hemoglobins only dimerisation can be observed but no tetramerisation. Experiments were done to locate the binding areas between the subunits in the dimeric molecule. Even after blocking of the alpha-NH2-group by cyanate, the stability of the dimeric molecule is not altered. Therefore the binding regions of the CTT-hemoglobins must be different from those of the tetrameric hemoglobins of vertebrates. Our results lead to a quarternary structure different from that of the hemoglobins of mammalians. This structure explains the possibility of dimerisation, but excludes tetramerisation.

[Hemoglobins, XXXVII. The primary structure of a monomeric insect hemoglobin (Erythrocruorin), component CTT IIIa of Chironomus thummi thummi. An anomalous Heme complex: E7 Gln, E11 Ile]. / Hmoglobine, XXXVII[1] Die Primärstruktur eines monomeren Insektenhämoglobins (Erythrocruorin), Komponente CTT IIIa von Chironomus thummi thummi. Ein ungewöhnlicher Hämkomplex: E7 Gln, E1 1 Ile.

The primary structure of the monomeric hemoglobin CTT IIIa of the midge larva of Chironomus thummi thummi is presented. Cyanogenbromide peptides and tryptic peptides were used for sequence analysis. The primary structure was established with a small number of large peptides. The complete sequencing of the cyanogen bromide peptides was enabled by the C-terminal fixation of arginine. The primary structure of CTT IIIa is compared to the beta-chains of human and to the monomeric component CTT III: CTT IIIa possesses a "tail" of 9 amino acids on the N-terminus, and shows only a small number of identical residues compared to the number that other CTT hemoglobins share with each other. Also the heme complex is unusual: E7 Gln and E11 Ile.

Studies on the evolutionary relationships between hemoglobins in Chironomus pallidivittatus and C. tentsans. I. Isolation and immunological analysis of monomeric and dimeric hemoglobins.

The monomeric hemoglobins of Chironomus tentans and C. pallidivittatus have been isolated and separated into their respective components by gel chromatography on Sephadex G-75 and ion-exchange chromatography on DEAE-Sephacel. The amino acid compositions of the purified components are given. The sequence of the 30 N-terminal amino acid residues of one of the monomeric components (Hb I from C. pallidivittatus) was determined and found to be identical in almost all of its parts with the monomeric hemoglobins of C. thummi (CTT III and CTT IV). Antibodies against the monomeric hemoglobins Hb I and Hb IIc and the dimeric fraction were highly specific and no cross reaction between dimeric and monomeric hemoglobins could be demonstrated. The antibodies against the monomers crossreact with the monomeric hemoglobins CTT III and CTT IV of C. thummi. Taken together with genetic data, the immunological results indicate that divergence of monomeric from dimeric forms was an early event in the evolution of the various hemoglobins in Chironomus.