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1.
Hepatology ; 75(1): 140-153, 2022 01.
Article in English | MEDLINE | ID: mdl-34510514

ABSTRACT

BACKGROUND AND AIMS: Globally, NAFLD is one of the most common liver disorders, with an estimated prevalence rate of more than 30% in men and 15% in women and an even higher prevalence in people with type 2 diabetes mellitus. Optimal pharmacologic therapeutic approaches for NAFLD are an urgent necessity. APPROACH AND RESULTS: In this study, we showed that compared with healthy controls, hepatic ACSL4 levels in patients with NAFLD were found to be elevated. Suppression of ACSL4 expression promoted mitochondrial respiration, thereby enhancing the capacity of hepatocytes to mediate ß-oxidation of fatty acids and to minimize lipid accumulation by up-regulating peroxisome proliferator-activated receptor coactivator-1 alpha. Moreover, we found that abemaciclib is a potent and selective ACSL4 inhibitor, and low dose of abemaciclib significantly ameliorated most of the NAFLD symptoms in multiple NAFLD mice models. CONCLUSIONS: Therefore, inhibition of ACSL4 is a potential alternative therapeutic approach for NAFLD.


Subject(s)
Aminopyridines/therapeutic use , Benzimidazoles/therapeutic use , Coenzyme A Ligases/antagonists & inhibitors , Non-alcoholic Fatty Liver Disease/drug therapy , Aminopyridines/pharmacology , Animals , Benzimidazoles/pharmacology , Biopsy , Coenzyme A Ligases/analysis , Coenzyme A Ligases/metabolism , Diet, High-Fat/adverse effects , Disease Models, Animal , Fatty Acids/metabolism , Gene Knockdown Techniques , Hep G2 Cells , Humans , Liver/drug effects , Liver/enzymology , Liver/pathology , Mice , Mice, Knockout , Non-alcoholic Fatty Liver Disease/etiology , Non-alcoholic Fatty Liver Disease/pathology , Oxidation-Reduction/drug effects
2.
Biosci Rep ; 40(4)2020 04 30.
Article in English | MEDLINE | ID: mdl-32286604

ABSTRACT

Long-chain fatty acyl CoA synthetases (ACSLs) activate fatty acids by CoA addition thus facilitating their intracellular metabolism. Dysregulated ACSL expression features in several cancers and can affect processes such as ferroptosis, fatty acid ß-oxidation, prostaglandin biosynthesis, steroidogenesis and phospholipid acyl chain remodelling. Here we investigate long chain acyl-CoA synthetase 3 (ACSL3) and long chain acyl-CoA synthetase 4 (ACSL4) expression in liver malignancies. The expression and subcellular localisations of the ACSL3 and ACSL4 isoforms in hepatocellular carcinoma (HCC), cholangiocarcinoma (CCA) and hepatic metastases were assessed by immunohistochemical analyses of multiple tumour tissue arrays and by subcellular fractionation of cultured HepG2 cells. The expression of both enzymes was increased in HCC compared with normal liver. Expression of ACSL3 was similar in HCC and hepatic metastases but lower in healthy tissue. Increased ACSL3 expression distinguished HCC from CCA with a sensitivity of 87.2% and a specificity of 75%. ACSL4 expression was significantly greater in HCC than in all other tumours and distinguished HCC from normal liver tissue with a sensitivity of 93.8% and specificity of 93.6%. Combined ACSL3 and ACSL4 staining scores distinguished HCC from hepatic metastases with 80.1% sensitivity and 77.1% specificity. These enzymes had partially overlapping intracellular distributions, ACSL4 localised to the plasma membrane and both isoforms associated with lipid droplets and the endoplasmic reticulum (ER). In conclusion, analysis of ACSL3 and ACSL4 expression can distinguish different classes of hepatic tumours.


Subject(s)
Adenocarcinoma/diagnosis , Biomarkers, Tumor/analysis , Carcinoma, Hepatocellular/diagnosis , Coenzyme A Ligases/analysis , Gastrointestinal Neoplasms/pathology , Liver Neoplasms/diagnosis , Adenocarcinoma/secondary , Adult , Aged , Animals , Biomarkers, Tumor/metabolism , Carcinoma, Hepatocellular/pathology , Cell Membrane/pathology , Coenzyme A Ligases/metabolism , Diagnosis, Differential , Endoplasmic Reticulum/pathology , Female , Hep G2 Cells , Humans , Immunohistochemistry , Lipid Droplets/pathology , Liver/cytology , Liver/pathology , Liver Neoplasms/secondary , Male , Middle Aged , Neoplasm Staging , Tissue Array Analysis
3.
J Surg Res ; 232: 128-136, 2018 12.
Article in English | MEDLINE | ID: mdl-30463708

ABSTRACT

BACKGROUND: The objective of this study was to determine acyl-CoA synthetase 5 (ACSL5) and Wnt2B expression patterns in human congenital pulmonary airway malformations (CPAMs) and to identify the possible roles of ACSL5 and Wnt2B in the pathogenesis of CPAM. METHODS: Expression of ACSL5 and Wnt2B was evaluated by immunohistochemical staining, Western blotting, and quantitative real-time polymerase chain reaction, which were performed on surgical specimens of CPAM and adjacent normal lung tissues as controls. RESULTS: Immunohistochemistry revealed that ACSL5 and Wnt2B immunopositive cells were predominantly detected in the mesenchymal cell nucleus, and there were lower expressions of ACSL5 and Wnt2B immunopositive cells in CPAM tissues than those in adjacent normal lung tissues. Western blotting and quantitative real-time polymerase chain reaction showed that ACSL5 and Wnt2B protein and mRNA expressions were significantly decreased in CPAM tissues as compared to the adjacent normal lung tissues (P < 0.05). In addition, there was a reduced level of ACSL5 relative to that of Wnt2B. CONCLUSIONS: The decreased ACSL5 and Wnt2B expressions correlated with aberrations in pulmonary development and in the pathogenesis of CPAM, so downregulation of ACSL5 and Wnt2B could play an important role in the development of bronchial-alveolar structures in CPAM.


Subject(s)
Coenzyme A Ligases/genetics , Cystic Adenomatoid Malformation of Lung, Congenital/etiology , Glycoproteins/genetics , Wnt Proteins/genetics , Coenzyme A Ligases/analysis , Coenzyme A Ligases/physiology , Glycoproteins/analysis , Glycoproteins/physiology , Humans , Immunohistochemistry , RNA, Messenger/analysis , Wnt Proteins/analysis , Wnt Proteins/physiology
4.
PLoS One ; 9(7): e100144, 2014.
Article in English | MEDLINE | ID: mdl-24992019

ABSTRACT

Seed storage oil, in the form of triacylglycerol (TAG), is degraded to provide carbon and energy during germination and early seedling growth by the fatty acid ß-oxidation in the peroxisome. Although the pathways for lipid degradation have been uncovered, understanding of the exact involved enzymes in soybean is still limited. Long-chain acyl-CoA synthetase (ACSL) is a critical enzyme that activates free fatty acid released from TAG to form the fatty acyl-CoA. Recent studies have shown the importance of ACSL in lipid degradation and synthesis, but few studies were focused on soybean. In this work, we cloned a ACSL gene from soybean and designated it as GmACSL2. Sequence analysis revealed that GmACSL2 encodes a protein of 733 amino acid residues, which is highly homologous to the ones in other higher plants. Complementation test showed that GmACSL2 could restore the growth of an ACS-deficient yeast strain (YB525). Co-expression assay in Nicotiana benthamiana indicated that GmACSL2 is located at peroxisome. Expression pattern analysis showed that GmACSL2 is highly expressed in germinating seedling and strongly induced 1 day after imbibition, which indicate that GmACSL2 may take part in the seed germination. GmACSL2 overexpression in yeast and soybean hairy root severely reduces the contents of the lipids and fatty acids, compared with controls in both cells, and enhances the ß-oxidation efficiency in yeast. All these results suggest that GmACSL2 may take part in fatty acid and lipid degradation. In conclusion, peroxisomal GmACSL2 from Glycine max probably be involved in the lipid degradation during seed germination.


Subject(s)
Coenzyme A Ligases/physiology , Glycine max/enzymology , Lipolysis , Peroxisomes/enzymology , Amino Acid Sequence , Coenzyme A Ligases/analysis , Coenzyme A Ligases/chemistry , Genetic Complementation Test , Germination , Metabolic Networks and Pathways , Molecular Sequence Data , Phylogeny , Plants, Genetically Modified , Seedlings/enzymology , Seedlings/growth & development , Seeds/enzymology , Seeds/growth & development , Sequence Alignment , Glycine max/genetics , Glycine max/metabolism , Nicotiana/genetics
5.
Biochim Biophys Acta ; 1841(2): 227-39, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24201376

ABSTRACT

The acyl-CoA synthetase 4 (ACSL4) has been implicated in carcinogenesis and neuronal development. Acyl-CoA synthetases are essential enzymes of lipid metabolism, and ACSL4 is distinguished by its preference for arachidonic acid. Two human ACSL4 isoforms arising from differential splicing were analyzed by ectopic expression in COS cells. We found that the ACSL4_v1 variant localized to the inner side of the plasma membrane including microvilli, and was also present in the cytosol. ACSL4_v2 contains an additional N-terminal hydrophobic region; this isoform was located at the endoplasmic reticulum and on lipid droplets. A third isoform was designed de novo by appending a mitochondrial targeting signal. All three ACSL4 variants showed the same specific enzyme activity. Overexpression of the isoenzymes increased cellular uptake of arachidonate to the same degree, indicating that the metabolic trapping of fatty acids is independent of the subcellular localization. Remarkably, phospholipid metabolism was changed by ACSL4 expression. Labeling with arachidonate showed that the amount of newly synthesized phosphatidylinositol was increased by all three ACSL4 isoenzymes but not by ACSL1. This was dependent on the expression level and the localization of the ACSL4 isoform. We conclude that in our model system exogenous fatty acids are channeled preferentially towards phosphatidylinositol by ACSL4 overexpression. The differential localization of the endogenous isoenzymes may provide compartment specific precursors of this anionic phospholipid important for many signaling processes.


Subject(s)
Coenzyme A Ligases/physiology , Fatty Acids/metabolism , Phosphatidylinositols/metabolism , Animals , Cell Line , Chlorocebus aethiops , Coenzyme A Ligases/analysis , Humans , Isoenzymes/analysis , Isoenzymes/physiology
6.
Biotechnol Lett ; 36(1): 141-5, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24068506

ABSTRACT

A novel cDNA gene, NgLACS, that encodes a long-chain acyl-CoA sythetase (LACS), was cloned from Nannochloropsis gaditana and characterized. The cDNA was 2,360 bp in length, consisting of an ORF of 1,950 bp, a 5'-untranslated region of 88 bp and a 3'-untranslated region of 322 bp. The deduced amino acid sequence of LACS was 649 amino acid residues in length with a predicted molecular weight of 71 kDa and an isoelectric point of pH 7.8. When the alga was treated with excessive nitrogen and iron, and at 15 °C, the proportion of long-chain polyunsaturated acyl-CoAs in the total acyl-CoAs and the abundance of NgLACS cDNA gene transcript were up-regulated. Over-expression of NgLACS in Saccharomyces cerevisiae caused the accumulation of eicosapentaenoic acid and docosahexaenoic acid.


Subject(s)
Coenzyme A Ligases/metabolism , Docosahexaenoic Acids/metabolism , Eicosapentaenoic Acid/metabolism , Recombinant Proteins/metabolism , Stramenopiles/enzymology , Coenzyme A Ligases/analysis , Coenzyme A Ligases/chemistry , Coenzyme A Ligases/genetics , DNA, Complementary/genetics , DNA, Complementary/metabolism , Recombinant Proteins/analysis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Saccharomyces cerevisiae/genetics , Stramenopiles/genetics , Stress, Physiological
7.
J Cell Biol ; 203(6): 985-1001, 2013 Dec 23.
Article in English | MEDLINE | ID: mdl-24368806

ABSTRACT

Control of lipid droplet (LD) nucleation and copy number are critical, yet poorly understood, processes. We use model peptides that shift from the endoplasmic reticulum (ER) to LDs in response to fatty acids to characterize the initial steps of LD formation occurring in lipid-starved cells. Initially, arriving lipids are rapidly packed in LDs that are resistant to starvation (pre-LDs). Pre-LDs are restricted ER microdomains with a stable core of neutral lipids. Subsequently, a first round of "emerging" LDs is nucleated, providing additional lipid storage capacity. Finally, in proportion to lipid concentration, new rounds of LDs progressively assemble. Confocal microscopy and electron tomography suggest that emerging LDs are nucleated in a limited number of ER microdomains after a synchronized stepwise process of protein gathering, lipid packaging, and recognition by Plin3 and Plin2. A comparative analysis demonstrates that the acyl-CoA synthetase 3 is recruited early to the assembly sites, where it is required for efficient LD nucleation and lipid storage.


Subject(s)
Coenzyme A Ligases/physiology , Endoplasmic Reticulum/metabolism , Lipid Metabolism , Animals , COS Cells , Caveolin 1/chemistry , Chlorocebus aethiops , Coenzyme A Ligases/analysis , Coenzyme A Ligases/metabolism , Endoplasmic Reticulum/ultrastructure , Green Fluorescent Proteins/analysis , Intracellular Space , Methyltransferases/chemistry , Protein Engineering , Protein Sorting Signals
8.
J Dairy Sci ; 96(6): 3840-4, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23567053

ABSTRACT

In dairy cows, ketosis is an important disease associated with negative energy balance, which leads to low blood glucose levels and high blood nonesterified fatty acid levels. The liver is the most active organ in cows for the metabolism of nonesterified fatty acids. Insulin is an anabolic hormone that plays numerous roles in the metabolism of carbohydrates, lipids, and proteins, as well as being a potent regulator of fatty acid oxidation. In this study, using fluorescent quantitative reverse-transcription PCR, ELISA, and primary hepatocytes cultured in vitro, we examined the effect of insulin (0, 5, 10, 20, 50, and 100 nmol/L) on fatty acid oxidation by monitoring mRNA and protein expression levels of key enzymes: long-chain acyl-coenzyme A synthetase, carnitine palmitoyltransferase I, and long-chain acyl-coenzyme A dehydrogenase. The results showed that the mRNA and protein expression of long-chain acyl-coenzyme A synthetase, carnitine palmitoyltransferase I, and long-chain acyl-coenzyme A dehydrogenase was markedly decreased when the concentration of insulin in the media was increased. These findings indicate that high levels of insulin significantly inhibit the expression of genes related to fatty acid oxidation and consequently results in a decreased level of fatty acid oxidation in calf hepatocytes.


Subject(s)
3-Hydroxyacyl CoA Dehydrogenases/genetics , Acetyl-CoA C-Acyltransferase/genetics , Carbon-Carbon Double Bond Isomerases/genetics , Cattle/metabolism , Enoyl-CoA Hydratase/genetics , Gene Expression/drug effects , Hepatocytes/metabolism , Insulin/administration & dosage , Racemases and Epimerases/genetics , Acyl-CoA Dehydrogenase, Long-Chain/analysis , Acyl-CoA Dehydrogenase, Long-Chain/genetics , Animals , Carnitine O-Palmitoyltransferase/analysis , Carnitine O-Palmitoyltransferase/genetics , Cells, Cultured , Coenzyme A Ligases/analysis , Coenzyme A Ligases/genetics , Fatty Acids, Nonesterified/blood , Fatty Acids, Nonesterified/metabolism , Hepatocytes/drug effects , Hepatocytes/enzymology , RNA, Messenger/analysis
9.
World J Gastroenterol ; 18(25): 3322-6, 2012 Jul 07.
Article in English | MEDLINE | ID: mdl-22783059

ABSTRACT

Cholate-CoA ligase (CCL) and bile acid-CoA: amino acid N-acyltransferase (BAAT) sequentially mediate bile-acid amidation. Defects can cause intrahepatic cholestasis. Distinction has required gene sequencing. We assessed potential clinical utility of immunostaining of liver for CCL and BAAT. Using commercially available antibodies against BAAT and CCL, we immunostained liver from an infant with jaundice, deficiency of amidated bile acids, and transcription-terminating mutation in BAAT. CCL was normally expressed. BAAT expression was not detected. Immunostaining may facilitate diagnosis in bile-acid amidation defects.


Subject(s)
Acyltransferases/deficiency , Liver/enzymology , Metabolism, Inborn Errors/diagnosis , Acyltransferases/genetics , Biopsy , Child , Coenzyme A Ligases/analysis , DNA Mutational Analysis , Fatty Acid Transport Proteins/analysis , Female , Genetic Predisposition to Disease , Humans , Immunohistochemistry , Infant , Jaundice/etiology , Metabolism, Inborn Errors/complications , Metabolism, Inborn Errors/drug therapy , Metabolism, Inborn Errors/enzymology , Mutation , Phenotype , Predictive Value of Tests
10.
J Dairy Sci ; 95(4): 1759-66, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22459824

ABSTRACT

Dairy cows are highly susceptible to ketosis after parturition. In the present study, we evaluated the expression of fatty acid ß-oxidation-related enzymes in the liver of ketotic (n=6) and nonketotic (n=6) cows. Serum levels of nonesterified fatty acids (NEFA), ß-hydroxybutyrate (BHBA), and glucose were determined by using standard biochemical techniques. The mRNA abundance and protein content of acyl-CoA synthetase long-chain (ACSL), carnitine palmitoyltransferase I (CPT I), carnitine palmitoyltransferase II (CPT II), acyl-CoA dehydrogenase long chain (ACADL), 3-hydroxy-3-methylglutaryl-CoA synthase (HMGCS), and acetyl-CoA carboxylase (ACC) were evaluated by real-time PCR and ELISA. We found that serum glucose levels were lower in ketotic cows than in nonketotic cows, but serum BHBA and NEFA concentrations were higher. Messenger RNA and protein levels of ACSL were significantly higher in livers of ketotic cows than those in nonketotic cows. In contrast, mRNA levels of CPT I and mRNA and protein levels of CPT II, ACADL, HMGCS, and ACC were decreased in the liver of ketotic cows. Serum NEFA concentration positively correlated with ACSL protein levels and negatively correlated with protein levels of CPT II, HMGCS, ACADL, and ACC. In addition, serum BHBA concentration negatively correlated with protein levels of CPT II, HMGCS, and ACADL. Overall, fatty acid ß-oxidation capability was altered in the liver of ketotic compared with nonketotic cows. Furthermore, high serum NEFA and BHBA concentrations play key roles in affecting pathways of fatty acid metabolism in the liver.


Subject(s)
Cattle Diseases/enzymology , Fatty Acids/metabolism , Ketosis/veterinary , Liver/enzymology , Puerperal Disorders/veterinary , 3-Hydroxybutyric Acid/blood , Acetyl-CoA Carboxylase/analysis , Acetyl-CoA Carboxylase/genetics , Acyl-CoA Dehydrogenases/analysis , Acyl-CoA Dehydrogenases/genetics , Animals , Blood Glucose/analysis , Carnitine O-Palmitoyltransferase/analysis , Carnitine O-Palmitoyltransferase/genetics , Cattle , Coenzyme A Ligases/analysis , Coenzyme A Ligases/genetics , Fatty Acids, Nonesterified/blood , Female , Hydroxymethylglutaryl-CoA Synthase/analysis , Hydroxymethylglutaryl-CoA Synthase/genetics , Ketosis/enzymology , Oxidation-Reduction , Puerperal Disorders/enzymology , RNA, Messenger/analysis
11.
Tree Physiol ; 29(12): 1599-606, 2009 Dec.
Article in English | MEDLINE | ID: mdl-19910325

ABSTRACT

We have investigated the spatial localization of enzymes that catalyze the sequential pathways of lignin biosynthesis in developing secondary xylem tissues of hybrid aspen (Populus sieboldii Miq. x Populus grandidentata Michx.) using immunohistochemical techniques. The enzymes phenylalanine ammonia-lyase, caffeic acid 3-O-methyltransferase and 4-coumarate:CoA ligase in the common phenylpropanoid pathway, cinnamyl-alcohol dehydrogenase (CAD) and peroxidase in the specific lignin pathway, 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (DAHPS) in the shikimate pathway and glutamine synthetase (GS) in the nitrogen reassimilation system were abundantly localized in the 6th to 9th wood fibers away from cambium; these wood fibers are likely undergoing the most intense lignification. Only weak immunolabeling of enzymes involved in the general phenylpropanoid and specific lignin pathways was detected in the cells near the cambium; lignification of these cells has likely been initiated after primary cell wall formation. In contrast, distinct localization of DAHPS and GS was observed around the cambium, which may be involved not only in lignin biosynthesis, but also in amino acid and protein synthesis, which are essential for cell survival. Our observations suggest that co-localization of enzymes related to the sequential shikimate, general phenylpropanoid and specific lignin branch pathways and to the nitrogen recycling system is associated with cell wall lignification of wood fibers during secondary xylem development.


Subject(s)
Lignin/biosynthesis , Plant Proteins/analysis , Populus/metabolism , Xylem/metabolism , 3-Deoxy-7-Phosphoheptulonate Synthase/analysis , 3-Deoxy-7-Phosphoheptulonate Synthase/metabolism , 3-Deoxy-7-Phosphoheptulonate Synthase/physiology , Alcohol Oxidoreductases/analysis , Alcohol Oxidoreductases/metabolism , Alcohol Oxidoreductases/physiology , Coenzyme A Ligases/analysis , Coenzyme A Ligases/metabolism , Coenzyme A Ligases/physiology , Glutamate-Ammonia Ligase/analysis , Glutamate-Ammonia Ligase/metabolism , Glutamate-Ammonia Ligase/physiology , Hybridization, Genetic , Immunohistochemistry , Methyltransferases/analysis , Methyltransferases/metabolism , Methyltransferases/physiology , Phenylalanine Ammonia-Lyase/analysis , Phenylalanine Ammonia-Lyase/metabolism , Phenylalanine Ammonia-Lyase/physiology , Plant Proteins/metabolism , Plant Proteins/physiology , Populus/enzymology , Populus/genetics , Xylem/enzymology , Xylem/growth & development
12.
New Phytol ; 179(4): 987-1003, 2008.
Article in English | MEDLINE | ID: mdl-18627494

ABSTRACT

The plant enzyme 4-coumarate:coenzyme A ligase (4CL) is part of a family of adenylate-forming enzymes present in all organisms. Analysis of genome sequences shows the presence of '4CL-like' enzymes in plants and other organisms, but their evolutionary relationships and functions remain largely unknown. 4CL and 4CL-like genes were identified by BLAST searches in Arabidopsis, Populus, rice, Physcomitrella, Chlamydomonas and microbial genomes. Evolutionary relationships were inferred by phylogenetic analysis of aligned amino acid sequences. Expression patterns of a conserved set of Arabidopsis and poplar 4CL-like acyl-CoA synthetase (ACS) genes were assayed. The conserved ACS genes form a land plant-specific class. Angiosperm ACS genes grouped into five clades, each of which contained representatives in three fully sequenced genomes. Expression analysis revealed conserved developmental and stress-induced expression patterns of Arabidopsis and poplar genes in some clades. Evolution of plant ACS enzymes occurred early in land plants. Differential gene expansion of angiosperm ACS clades has occurred in some lineages. Evolutionary and gene expression data, combined with in vitro and limited in vivo protein function data, suggest that angiosperm ACS enzymes play conserved roles in octadecanoid and fatty acid metabolism, and play roles in organ development, for example in anthers.


Subject(s)
Coenzyme A Ligases/genetics , Genome, Plant , Plant Proteins/genetics , Plants/genetics , Arabidopsis/enzymology , Arabidopsis/genetics , Base Sequence , Bryopsida/enzymology , Bryopsida/genetics , Chloroplasts/chemistry , Coenzyme A Ligases/analysis , Coenzyme A Ligases/physiology , Computational Biology , Evolution, Molecular , Gene Expression , Multigene Family , Oryza/enzymology , Oryza/genetics , Peroxisomes/chemistry , Phylogeny , Plant Proteins/analysis , Plant Proteins/physiology , Plants/enzymology , Plants, Genetically Modified/metabolism , Plants, Genetically Modified/ultrastructure , Populus/enzymology , Populus/genetics , Sequence Alignment , Nicotiana/genetics
13.
J Appl Microbiol ; 105(1): 42-50, 2008 Jul.
Article in English | MEDLINE | ID: mdl-18266698

ABSTRACT

AIMS: Characterization of the role of CaiC in the biotransformation of trimethylammonium compounds into l(-)-carnitine in Escherichia coli. METHODS AND RESULTS: The caiC gene was cloned and overexpressed in E. coli and its effect on the production of l(-)-carnitine was analysed. Betaine:CoA ligase and CoA transferase activities were analysed in cell free extracts and products were studied by electrospray mass spectrometry (ESI-MS). Substrate specificity of the caiC gene product was high, reflecting the high specialization of the carnitine pathway. Although CoA-transferase activity was also detected in vitro, the main in vivo role of CaiC was found to be the synthesis of betainyl-CoAs. Overexpression of CaiC allowed the biotransformation of crotonobetaine to l(-)-carnitine to be enhanced nearly 20-fold, the yield reaching up to 30% (with growing cells). Higher yields were obtained using resting cells (up to 60%), even when d(+)-carnitine was used as substrate. CONCLUSIONS: The expression of CaiC is a control step in the biotransformation of trimethylammonium compounds in E. coli. SIGNIFICANCE AND IMPACT OF THE STUDY: A bacterial betaine:CoA ligase has been characterized for the first time, underlining its important role for the production of l-carnitine with Escherichia coli.


Subject(s)
Betaine/metabolism , Coenzyme A Ligases/metabolism , Coenzyme A/metabolism , Escherichia coli Proteins/metabolism , Escherichia coli/enzymology , Industrial Microbiology , Industrial Waste , Bioreactors , Carnitine/biosynthesis , Chromatography, High Pressure Liquid , Cloning, Molecular , Coenzyme A Ligases/analysis , Coenzyme A Ligases/genetics , Escherichia coli/genetics , Escherichia coli Proteins/analysis , Escherichia coli Proteins/genetics , Gene Expression , Genes, Bacterial , Genetic Vectors , Polymerase Chain Reaction/methods , Spectrometry, Mass, Electrospray Ionization , Substrate Specificity , Trimethyl Ammonium Compounds/metabolism
14.
Aquat Toxicol ; 82(4): 265-71, 2007 May 31.
Article in English | MEDLINE | ID: mdl-17433457

ABSTRACT

The effect of the water-soluble fraction of crude oil (WSF) on lipid metabolism was studied at critical metabolic points, namely fatty acid activation, enzymes of triacylglycerol and phospholipid synthesis, and membrane (lipid packing) properties in the freshwater prawn Macrobrachium borellii. To determine the effect of the contaminant, adults and embryos at different stages of development were exposed to a sublethal concentration of WSF for 7 days. After exposure, microsomal palmitoyl-CoA synthetase (ACS) showed a two-fold increase in adult midgut gland. Embryo's ACS activity was also affected, the increment being correlated with the developing stage. Endoplasmic reticulum acylglycerol synthesis was also increased by WSF exposure in adults and stage 5 embryos, but not at earlier stages of development. Triacylglycerol synthesis was particularly increased (18.5%) in adult midgut gland. The microsomal membrane properties were studied by fluorescent steady-state anisotropy, using the rotational behavior of the fluorescent probe 1,6-diphenyl-1,3,5-hexatriene (DPH). Microsomes from midgut gland of WSF-exposed prawn showed no differences in fluidity. Nevertheless, microsomes incubated with WSF in vitro increased their fluidity in a temperature- and WSF concentration-dependent fashion. Both, aliphatic and aromatic hydrocarbons individually tested elicited an increase in membrane fluidity at 10 mg/l, but at 4 mg/l only nC10-C16 aliphatics did. In vivo results indicate that WSF increased the activity of microsomal enzymes that are critical in lipid metabolism, though this change was not due to direct alterations in membrane fluidity, suggesting a synthesis induction, or an enzyme-regulatory mechanism. Nevertheless, hydrocarbons elicited membrane fluidity alterations in in vitro experiments at concentrations that could be found in the environment after an oil spill.


Subject(s)
Lipid Metabolism/drug effects , Palaemonidae/drug effects , Petroleum/toxicity , Water Pollutants, Chemical/toxicity , Animals , Carbon Isotopes/analysis , Coenzyme A Ligases/analysis , Embryo, Nonmammalian/drug effects , Endoplasmic Reticulum/drug effects , Female , Fluorescence Polarization/veterinary , Hydrocarbons, Alicyclic/toxicity , Hydrocarbons, Aromatic/toxicity , Membrane Fluidity/drug effects , Microsomes/drug effects , Microsomes/metabolism , Palaemonidae/metabolism , Temperature , Triglycerides/analysis
15.
Anal Biochem ; 356(1): 18-29, 2006 Sep 01.
Article in English | MEDLINE | ID: mdl-16876102

ABSTRACT

Membrane proteins play an important role in cellular function. However, their analysis by mass spectrometry often is hindered by their hydrophobicity and/or low abundance. In this article, we present a method for the mass spectrometric analysis of membrane proteins based on the isolation of the resident membranes, isolation of the proteins by gel electrophoresis, and electroelution followed by enzymatic digestion by both trypsin and proteinase K. With this method, we have achieved 82-99% sequence coverage for the membrane proteins carnitine palmitoyltransferase-I (CPT-I), long-chain acyl-CoA synthetase (LCAS), and voltage-dependent anion channel (VDAC), isolated from rat liver mitochondrial outer membranes, including the transmembrane domains of these integral membrane proteins. This high sequence coverage allowed the identification of the isoforms of the proteins under study. This methodology provides a targeted approach for examining membrane proteins in detail.


Subject(s)
Membrane Proteins/analysis , Mitochondria, Liver/chemistry , Mitochondrial Proteins/analysis , Amino Acid Sequence , Animals , Carnitine O-Palmitoyltransferase/analysis , Carnitine O-Palmitoyltransferase/genetics , Coenzyme A Ligases/analysis , Coenzyme A Ligases/genetics , Endopeptidase K , Male , Mass Spectrometry , Molecular Sequence Data , Proteomics , Rats , Rats, Sprague-Dawley , Trypsin , Voltage-Dependent Anion Channels/analysis , Voltage-Dependent Anion Channels/genetics
16.
Biochemistry ; 45(22): 6956-66, 2006 Jun 06.
Article in English | MEDLINE | ID: mdl-16734431

ABSTRACT

Because alpha-synuclein (Snca) has a role in brain lipid metabolism, we determined the impact that the loss of alpha-synuclein had on brain arachidonic acid (20:4n-6) metabolism in vivo using Snca-/- mice. We measured [1-(14)C]20:4n-6 incorporation and turnover kinetics in brain phospholipids using an established steady-state kinetic model. Liver was used as a negative control, and no changes were observed between groups. In Snca-/- brains, there was a marked reduction in 20:4n-6-CoA mass and in microsomal acyl-CoA synthetase (Acsl) activity toward 20:4n-6. Microsomal Acsl activity was completely restored after the addition of exogenous wild-type mouse or human alpha-synuclein, but not by A30P, E46K, and A53T forms of alpha-synuclein. Acsl and acyl-CoA hydrolase expression was not different between groups. The incorporation and turnover of 20:4n-6 into brain phospholipid pools were markedly reduced. The dilution coefficient lambda, which indicates 20:4n-6 recycling between the acyl-CoA pool and brain phospholipids, was increased 3.3-fold, indicating more 20:4n-6 was entering the 20:4n-6-CoA pool from the plasma relative to that being recycled from the phospholipids. This is consistent with the reduction in Acsl activity observed in the Snca-/- mice. Using titration microcalorimetry, we determined that alpha-synuclein bound free 20:4n-6 (Kd = 3.7 microM) but did not bind 20:4n-6-CoA. These data suggest alpha-synuclein is involved in substrate presentation to Acsl rather than product removal. In summary, our data demonstrate that alpha-synuclein has a major role in brain 20:4n-6 metabolism through its modulation of endoplasmic reticulum-localized acyl-CoA synthetase activity, although mutant forms of alpha-synuclein fail to restore this activity.


Subject(s)
Arachidonic Acid/metabolism , Brain/enzymology , Coenzyme A Ligases/metabolism , alpha-Synuclein/metabolism , Animals , Coenzyme A Ligases/analysis , Endoplasmic Reticulum/enzymology , Mice , Mice, Mutant Strains , Microsomes/enzymology , Mutation , alpha-Synuclein/genetics
17.
J Plant Physiol ; 163(2): 115-27, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16399002

ABSTRACT

The phenylpropanoid pathway yields a variety of phenolics that are closely associated with fruit qualities in addition to structural and defense-related functions. However, very little has been reported concerning its metabolism in fruit. This experiment was designed to assess changes of eleven phenolic acids in grape berry (Vitis vinifera L. cv. Cabernet Sauvignon) and explore both the activities and amounts of three key enzymes--phenylalanine ammonia-lyase (PAL), cinnamate-4-hydroxylase (C4H) and 4-coumarate:coenzyme A ligase (4CL)--catalyzing the biosynthesis of these compounds during berry development. Finally, the subcellular localizations of the enzymes within berry tissues were also investigated using immuno-gold electron microscopic technique. The results indicated that the contents of gallic, protocatechuic, gentisic and caffeic acid all changed drastically during berry development, while other compounds containing p-hydroxybenzoic, vanillic, syringic, chlorogenic, p-coumaric, ferulic and sinapic acid varied only slightly. Activities of PAL, C4H and 4CL showed similar pattern changes with two accumulated peaks throughout berry development. In addition, their activities all showed a highly positive correlation with the total contents of phenolic acids, whereas the immunoblotting analysis showed that changes in enzyme activities were independent of the enzyme amounts. Results from the subcellular-localization study revealed that PAL was mainly present in the cell walls, secondarily thickened walls, and the parenchyma cells of the berry mesocarp cells, C4H was found primarily in the chloroplast (plastid) and nucleus and 4CL predominantly in the secondarily thickened walls and the parenchyma cells of mesocarp vascular tissue.


Subject(s)
Fruit/enzymology , Hydroxybenzoates/metabolism , Vitis/enzymology , Coenzyme A Ligases/analysis , Coenzyme A Ligases/metabolism , Flavonoids/metabolism , Fruit/growth & development , Fruit/ultrastructure , Immunohistochemistry , Microscopy, Immunoelectron , Phenols/metabolism , Phenylalanine/metabolism , Phenylalanine Ammonia-Lyase/analysis , Phenylalanine Ammonia-Lyase/metabolism , Trans-Cinnamate 4-Monooxygenase/analysis , Trans-Cinnamate 4-Monooxygenase/metabolism , Vitis/growth & development
18.
Methods Enzymol ; 397: 212-21, 2005.
Article in English | MEDLINE | ID: mdl-16260293

ABSTRACT

The 3-hydroxypropionate cycle is a novel pathway for autotrophic CO2 fixation, which has been demonstrated in the thermophilic phototrophic bacterium Chloroflexus aurantiacus; a yet to be defined variant of this pathway occurs in autotrophic members of the Sulfolobales (Crenarchaeota). The 3-hydroxypropionate cycle consists of the conversion of acetyl-CoA to succinyl-CoA, via malonyl-CoA, 3-hydroxypropionate, propionyl-CoA, and methylmalonyl-CoA. Carboxylation of acetyl-CoA and propionyl-CoA by acetyl-CoA/propionyl-CoA carboxylase are the CO2 fixation reactions. Succinyl-CoA serves as a precursor of cell carbon and also as a precursor of the starting compound acetyl-CoA. In C. aurantiacus, the cycle is completed by converting succinyl-CoA to malyl-CoA and cleaving malyl-CoA to acetyl-CoA and glyoxylate. Glyoxylate is then converted in a second cyclic pathway to pyruvate, which serves as a universal cell carbon precursor. The fate of succinyl-CoA in Sulfolobales is at issue. Assays used to study the characteristic enzymes of this novel pathway in C. aurantiacus are reported.


Subject(s)
Carbon Dioxide/metabolism , Chloroflexus/metabolism , Lactic Acid/analogs & derivatives , Acetyl-CoA Carboxylase/analysis , Coenzyme A Ligases/analysis , Coenzyme A-Transferases/analysis , Lactic Acid/metabolism , Methylmalonyl-CoA Decarboxylase/analysis , Oxidoreductases/analysis , Oxo-Acid-Lyases/analysis , Sulfolobaceae/metabolism
19.
J Pathol ; 207(3): 295-300, 2005 Nov.
Article in English | MEDLINE | ID: mdl-16110457

ABSTRACT

Several pathways of fatty acid metabolism have been shown to be associated with the pathogenesis of colorectal cancer. Fatty acid acyl-CoA thioesters are formed from free fatty acids and coenzyme A by the activity of acyl-CoA synthetases (ACSs). Whilst an increase in ACS4 expression has been associated with colorectal carcinogenesis, little is known about possible pathogenetic functions of other ACS isoforms, such as ACS5, in tumourigenesis. In the present study, gene expression, protein synthesis, and enzymatic activity of ACS5 in sporadic colorectal adenocarcinomas, adenomas, and established cell lines were analysed using RT-PCR, western blot analysis, immunofluorescence, and an enzymatic assay. Enhanced expression of ACS5 mRNA and protein as well as enzymatic activity was found in adenomas and in 11 (73%; group 1) of 15 colorectal adenocarcinomas investigated, while a decrease of ACS5 was seen in four tumours (27%; group 2). However, basal ACS5 enzymatic activity was increased as a percentage of the total activity of ACSs in both groups, arguing for an absolute (group 1) or relative (group 2) increase in ACS5 enzymatic activity in all adenocarcinomas investigated. These findings are reflected by in vitro analysis of three established colorectal adenocarcinoma cell lines, in which activity of ACS5 occurred. The results suggest the involvement of ACS5 in the early genesis of colorectal cancer, most likely by modification of the transport and pool formation of long-chain acyl-CoA thioesters, as recently demonstrated for other isoforms of the ACS family.


Subject(s)
Adenocarcinoma/metabolism , Coenzyme A Ligases/metabolism , Colorectal Neoplasms/metabolism , Adenocarcinoma/enzymology , Adenocarcinoma/genetics , Adenoma/enzymology , Adenoma/genetics , Adenoma/metabolism , Aged , Aged, 80 and over , Cell Line, Tumor , Coenzyme A Ligases/analysis , Coenzyme A Ligases/genetics , Colon/enzymology , Colon/metabolism , Colorectal Neoplasms/enzymology , Colorectal Neoplasms/genetics , Female , Gene Expression Regulation, Neoplastic/genetics , Humans , Intestinal Mucosa/metabolism , Male , Middle Aged , Neoplasm Proteins/biosynthesis , RNA, Messenger/genetics , RNA, Neoplasm/genetics , Rectum/enzymology , Rectum/metabolism
20.
Biochim Biophys Acta ; 1734(3): 235-46, 2005 Jun 01.
Article in English | MEDLINE | ID: mdl-15893958

ABSTRACT

The present study investigated the hepatic regulation of fatty acid metabolism in hTNFalpha transgenic mice. Reduced hepatic mRNA levels and activities of carnitine palmitoyltransferase-II (CPT-II) and mitochondrial HMG-CoA synthase were observed, accompanied by decreased fatty acid oxidation, fatty acyl-CoA oxidase and fatty acid synthase (FAS) activities and down-regulated gene expression of mitochondrial acetyl-CoA carboxylase 2 (ACC2). The mRNA levels of peroxisome proliferator-activated receptor alpha (PPARalpha) and PPARdelta were reduced. The hepatic fatty acid composition was altered, with increased amounts of saturated and polyunsaturated fatty acids. The relative amounts of Delta(9) desaturated fatty acids were decreased, as was Delta(9)desaturase mRNA. The CPT-I mRNA level remained unchanged. The PPARalpha targeted genes CPT-II and HMG-CoA synthase are potential regulators of mitochondrial fatty acid oxidation and ketogenesis in hTNFalpha transgenic mice, and the increased propionyl-CoA level found is a possible inhibitor of these processes. Reduced mitochondrial and peroxisomal fatty acid oxidation may explain the increased hepatic triglyceride level induced by TNFalpha. This is not due to de novo fatty acid synthesis as both FAS activity and gene expression of ACC2 were reduced.


Subject(s)
Fatty Acids/metabolism , Liver/metabolism , PPAR alpha/genetics , Tumor Necrosis Factor-alpha/genetics , Animals , Coenzyme A Ligases/analysis , Down-Regulation , Fatty Acid Desaturases/metabolism , Fatty Acid Synthases/analysis , Fatty Acids/analysis , Fatty Acids/blood , Fatty Acids, Monounsaturated/analysis , Fatty Acids, Monounsaturated/blood , Fatty Acids, Monounsaturated/metabolism , Female , Hydroxymethylglutaryl-CoA Synthase , Keto Acids/metabolism , Liver/chemistry , Liver/enzymology , Male , Mice , Mice, Transgenic , Models, Animal , Oxidation-Reduction , PPAR alpha/biosynthesis , RNA, Messenger/analysis , Stearoyl-CoA Desaturase , Tumor Necrosis Factor-alpha/biosynthesis
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