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1.
PLoS One ; 16(8): e0255910, 2021.
Article in English | MEDLINE | ID: mdl-34379680

ABSTRACT

BACKGROUND: Previous studies have found that healthcare-associated bacteremia (HAB) by Aeromonas species is associated with mortality. However, there is limited data on this outcome in patients with hematologic malignancies. This study aimed to identify the clinical features of patients with malignant hematologic diseases diagnosed with Aeromonas sobria bacteremia and to evaluate whether the type of bacteremia, community-acquired bacteremia (CAB) or HAB, is associated with mortality. METHODS: We retrospectively reviewed the clinical records of pediatric and adult patients between January 2000 and December 2017. Clinical characteristics were compared between CAB and HAB. Additionally, we stratified based on age group. Survival outcomes were assessed with Kaplan-Meier curves and a multivariate Cox regression analysis. RESULTS: A total of 37 patients (median age 24 years) were identified; 23 (62%) had HAB and 14 (38%) had CAB. Overall, the most common presenting symptom was abdominal pain (41%). Acute lymphoblastic leukemia (n = 12/15, 80%) and acute myeloid leukemia (n = 8/22, 36%) were the primary hematologic malignancies in pediatric and adult patients, respectively. CAB patients had worse overall survival (OS) rates at 30 days in all (43% versus HAB 91%, p = 0.006) and adult patients (30% versus HAB 92%, p = 0.002). Cox regression analysis found that quick Sequential Organ Failure Assessment and CAB were statistically significant factors associated with mortality. Low antimicrobial-resistant was noted, except for ciprofloxacin (n = 5/37, 14%). CONCLUSION: Our study found a worse OS among patients with hematologic malignancies and CAB by Aeromonas sobria. Our results suggest that patients with CAB present with a worse disease severity. These findings should aid clinicians to determine the survival prognosis in this population.


Subject(s)
Aeromonas/isolation & purification , Bacteremia/pathology , Hematologic Neoplasms/pathology , Adolescent , Adult , Aeromonas/drug effects , Aged , Bacteremia/complications , Bacteremia/microbiology , Bacteremia/mortality , Child , Child, Preschool , Ciprofloxacin/pharmacology , Cross Infection/complications , Cross Infection/microbiology , Cross Infection/mortality , Cross Infection/pathology , Drug Resistance, Bacterial/drug effects , Female , Hematologic Neoplasms/complications , Humans , Kaplan-Meier Estimate , Male , Middle Aged , Multiple Organ Failure , Peru , Proportional Hazards Models , Retrospective Studies , Young Adult
2.
PLoS One ; 16(5): e0250525, 2021.
Article in English | MEDLINE | ID: mdl-33945553

ABSTRACT

Klebsiella pneumoniae is a major pathogen implicated in nosocomial infections. Extended-spectrum ß-lactamase (ESBL)-producing K. pneumoniae isolates are a public health concern. We aim to characterize the type of ß-lactamases and the associated resistance mechanisms in ESBL-producing K. pneumoniae isolates obtained from blood cultures in a Portuguese hospital, as well as to determine the circulating clones. Twenty-two cefotaxime/ceftazidime-resistant (CTX/CAZR) K. pneumoniae isolates were included in the study. Identification was performed by MALDI-TOF MS and the antimicrobial susceptibility testing by disk-diffusion. The screening test for ESBL-production was performed and ESBL-producer isolates were further characterized. The presence of different beta-lactamase genes (blaCTX-M, blaSHV, blaTEM, blaKPC, blaNDM, blaVIM, blaOXA-48, blaCMY-2, blaDHA-1, blaFOX, blaMOX, and blaACC) was analyzed by PCR/sequencing in ESBL-producer isolates, as well as the presence of other resistance genes (aac(6')-Ib-cr, tetA/B, dfrA, qnrA/B/S, sul1/2/3) or integron-related genes (int1/2/3). Multilocus-sequence-typing (MLST) was performed for selected isolates. ESBL activity was detected in 12 of the 22 CTX/CAZR K. pneumoniae isolates and 11 of them carried the blaCTX-M-15 gene (together with blaTEM), and the remaining isolate carried the blaSHV-106 gene. All the blaCTX-M-15 harboring isolates also contained a blaSHV gene (blaSHV-1, blaSHV-11 or blaSHV-27 variants). Both blaSHV-27 and blaSHV-106 genes correspond to ESBL-variants. Two of the CTX-M-15 producing isolates carried a carbapenemase gene (blaKPC2/3 and blaOXA-48) and showed imipenem resistance. The majority of the ESBL-producing isolates carried the int1 gene, as well as sulphonamide-resistance genes (sul2 and/or sul3); the tetA gene was detected in all eight tetracycline-resistant isolates. Three different genetic lineages were found in selected isolates: ST348 (one CTX-M-15/TEM/SHV-27/KPC-2/3-producer isolate), ST11 (two CTX-M-15/TEM/SHV-1- and CTX-M-15-TEM-SHV-11-OXA-48-producer isolates) and ST15 (one SHV-106/TEM-producer isolate). ESBL enzymes of CTX-M-15 or SHV-type are detected among blood K. pneumoniae isolates, in some cases in association with carbapenemases of KPC or OXA-48 type.


Subject(s)
Cefotaxime/therapeutic use , Ceftazidime/therapeutic use , Drug Resistance, Multiple, Bacterial , Klebsiella Infections/pathology , Klebsiella pneumoniae/genetics , Sepsis/pathology , beta-Lactamases/genetics , Anti-Bacterial Agents/therapeutic use , Cross Infection/drug therapy , Cross Infection/genetics , Cross Infection/microbiology , Cross Infection/pathology , Humans , Klebsiella Infections/drug therapy , Klebsiella Infections/genetics , Klebsiella Infections/microbiology , Klebsiella pneumoniae/drug effects , Klebsiella pneumoniae/isolation & purification , Microbial Sensitivity Tests , Multilocus Sequence Typing/methods , Sepsis/drug therapy , Sepsis/genetics , Sepsis/microbiology , Sequence Analysis, DNA/methods
3.
Int J Mol Sci ; 22(6)2021 Mar 13.
Article in English | MEDLINE | ID: mdl-33805767

ABSTRACT

Novel therapeutics are needed to treat pathologies associated with the Clostridioides difficile binary toxin (CDT), particularly when C. difficile infection (CDI) occurs in the elderly or in hospitalized patients having illnesses, in addition to CDI, such as cancer. While therapies are available to block toxicities associated with the large clostridial toxins (TcdA and TcdB) in this nosocomial disease, nothing is available yet to treat toxicities arising from strains of CDI having the binary toxin. Like other binary toxins, the active CDTa catalytic subunit of CDT is delivered into host cells together with an oligomeric assembly of CDTb subunits via host cell receptor-mediated endocytosis. Once CDT arrives in the host cell's cytoplasm, CDTa catalyzes the ADP-ribosylation of G-actin leading to degradation of the cytoskeleton and rapid cell death. Although a detailed molecular mechanism for CDT entry and host cell toxicity is not yet fully established, structural and functional resemblances to other binary toxins are described. Additionally, unique conformational assemblies of individual CDT components are highlighted herein to refine our mechanistic understanding of this deadly toxin as is needed to develop effective new therapeutic strategies for treating some of the most hypervirulent and lethal strains of CDT-containing strains of CDI.


Subject(s)
Bacterial Proteins/antagonists & inhibitors , Bacterial Toxins/antagonists & inhibitors , Clostridioides difficile/pathogenicity , Cross Infection/drug therapy , Enterocolitis, Pseudomembranous/drug therapy , Enterotoxins/antagonists & inhibitors , ADP-Ribosylation/drug effects , Actin Cytoskeleton/drug effects , Actin Cytoskeleton/metabolism , Actin Cytoskeleton/ultrastructure , Actins/deficiency , Actins/genetics , Anti-Bacterial Agents/therapeutic use , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Bacterial Toxins/chemistry , Bacterial Toxins/genetics , Bacterial Toxins/metabolism , Binding Sites , Clostridioides difficile/drug effects , Clostridioides difficile/genetics , Clostridioides difficile/metabolism , Cross Infection/metabolism , Cross Infection/microbiology , Cross Infection/pathology , Endocytosis/drug effects , Enterocolitis, Pseudomembranous/metabolism , Enterocolitis, Pseudomembranous/microbiology , Enterocolitis, Pseudomembranous/pathology , Enterotoxins/chemistry , Enterotoxins/genetics , Enterotoxins/metabolism , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Epithelial Cells/microbiology , Epithelial Cells/ultrastructure , Humans , Models, Molecular , Protein Binding , Protein Domains , Protein Interaction Domains and Motifs , Protein Structure, Secondary
4.
Int J Mol Sci ; 22(9)2021 Apr 26.
Article in English | MEDLINE | ID: mdl-33925831

ABSTRACT

Hypoalbuminemia is associated with the acquisition and severity of infectious diseases, and intact innate and adaptive immune responses depend on albumin. Albumin oxidation and breakdown affect interactions with bioactive lipid mediators that play important roles in antimicrobial defense and repair. There is bio-mechanistic plausibility for a causal link between hypoalbuminemia and increased risks of primary and secondary infections. Serum albumin levels have prognostic value for complications in viral, bacterial and fungal infections, and for infectious complications of non-infective chronic conditions. Hypoalbuminemia predicts the development of healthcare-associated infections, particularly with Clostridium difficile. In coronavirus disease 2019, hypoalbuminemia correlates with viral load and degree of acute lung injury and organ dysfunction. Non-oncotic properties of albumin affect the pharmacokinetics and pharmacodynamics of antimicrobials. Low serum albumin is associated with inadequate antimicrobial treatment. Infusion of human albumin solution (HAS) supplements endogenous albumin in patients with cirrhosis of the liver and effectively supported antimicrobial therapy in randomized controlled trials (RCTs). Evidence of the beneficial effects of HAS on infections in hypoalbuminemic patients without cirrhosis is largely observational. Prospective RCTs are underway and, if hypotheses are confirmed, could lead to changes in clinical practice for the management of hypoalbuminemic patients with infections or at risk of infectious complications.


Subject(s)
Hypoalbuminemia/pathology , Anti-Infective Agents/therapeutic use , Bacteremia/drug therapy , Bacteremia/pathology , COVID-19/complications , COVID-19/pathology , COVID-19/virology , Cross Infection/drug therapy , Cross Infection/pathology , Humans , Hypoalbuminemia/drug therapy , Hypoalbuminemia/etiology , Immunity, Innate , Prognosis , SARS-CoV-2/isolation & purification , Serum Albumin/therapeutic use
5.
Cell Mol Life Sci ; 78(6): 2585-2606, 2021 Mar.
Article in English | MEDLINE | ID: mdl-33582841

ABSTRACT

Hospital-associated infections are a major concern for global public health. Infections with antibiotic-resistant pathogens can cause empiric treatment failure, and for infections with multidrug-resistant bacteria which can overcome antibiotics of "last resort" there exists no alternative treatments. Despite extensive sanitization protocols, the hospital environment is a potent reservoir and vector of antibiotic-resistant organisms. Pathogens can persist on hospital surfaces and plumbing for months to years, acquire new antibiotic resistance genes by horizontal gene transfer, and initiate outbreaks of hospital-associated infections by spreading to patients via healthcare workers and visitors. Advancements in next-generation sequencing of bacterial genomes and metagenomes have expanded our ability to (1) identify species and track distinct strains, (2) comprehensively profile antibiotic resistance genes, and (3) resolve the mobile elements that facilitate intra- and intercellular gene transfer. This information can, in turn, be used to characterize the population dynamics of hospital-associated microbiota, track outbreaks to their environmental reservoirs, and inform future interventions. This review provides a detailed overview of the approaches and bioinformatic tools available to study isolates and metagenomes of hospital-associated bacteria, and their multi-layered networks of transmission.


Subject(s)
Bacteria/genetics , Cross Infection/pathology , Drug Resistance, Multiple, Bacterial/genetics , Anti-Bacterial Agents/therapeutic use , Bacteria/classification , Bacteria/isolation & purification , Cross Infection/drug therapy , Cross Infection/microbiology , Gene Transfer, Horizontal , Humans , Metagenomics , Plasmids/genetics , Plasmids/metabolism , RNA, Ribosomal, 16S/chemistry , RNA, Ribosomal, 16S/classification , RNA, Ribosomal, 16S/metabolism , Whole Genome Sequencing
6.
BMC Infect Dis ; 21(1): 77, 2021 Jan 15.
Article in English | MEDLINE | ID: mdl-33451284

ABSTRACT

BACKGROUND: Candidemia has emerged as an important nosocomial infection, with a mortality rate of 30-50%. It is the fourth most common nosocomial bloodstream infection (BSI) in the United States and the seventh most common nosocomial BSI in Europe and Japan. The aim of this study was to assess the performance of the Sequential Organ Failure Assessment (SOFA) score for determining the severity and prognosis of candidemia. METHODS: We performed a retrospective study of patients admitted to hospital with candidemia between September 2014 and May 2018. The severity of candidemia was evaluated using the SOFA score and the Acute Physiology, Age, Chronic Health Evaluation II (APACHE II) score. Patients' underlying diseases were assessed by the Charlson Comorbidity Index (CCI). RESULTS: Of 70 patients enrolled, 41 (59%) were males, and 29 (41%) were females. Their median age was 73 years (range: 36-93 years). The most common infection site was catheter-related bloodstream infection (n=36, 51%).The 30-day, and in-hospital mortality rates were 36 and 43%, respectively. Univariate analysis showed that SOFA score ≥5, APACHE II score ≥13, initial antifungal treatment with echinocandin, albumin < 2.3, C-reactive protein > 6, disturbance of consciousness, and CCI ≥3 were related with 30-day mortality. Of these 7, multivariate analysis showed that the combination of SOFA score ≥5 and CCI ≥3 was the best independent prognostic indicator for 30-day and in-hospital mortality. CONCLUSIONS: The combined SOFA score and CCI was a better predictor of the 30-day mortality and in-hospital mortality than the APACHE II score alone.


Subject(s)
APACHE , Candidemia/diagnosis , Candidemia/mortality , Cross Infection/diagnosis , Cross Infection/mortality , Data Accuracy , Organ Dysfunction Scores , Adult , Aged , Aged, 80 and over , C-Reactive Protein/analysis , Candidemia/epidemiology , Candidemia/pathology , Comorbidity , Cross Infection/epidemiology , Cross Infection/pathology , Female , Hospital Mortality , Humans , Japan/epidemiology , Male , Middle Aged , Prognosis , ROC Curve , Retrospective Studies
7.
Eur J Clin Microbiol Infect Dis ; 40(3): 495-502, 2021 Mar.
Article in English | MEDLINE | ID: mdl-33389263

ABSTRACT

Bacterial and fungal co-infection has been reported in patients with COVID-19, but there is limited experience on these infections in critically ill patients. The objective of this study was to assess the characteristics and ouctome of ICU-acquired infections in COVID-19 patients. We conducted a retrospective single-centre, case-control study including 140 patients with severe COVID-19 admitted to the ICU between March and May 2020. We evaluated the epidemiological, clinical, and microbiological features, and outcome of ICU-acquired infections. Fifty-seven patients (40.7%) developed a bacterial or fungal nosocomial infection during ICU stay. Infection occurred after a median of 9 days (IQR 5-11) of admission and was significantly associated with the APACHE II score (p = 0.02). There were 91 episodes of infection: primary (31%) and catheter-related (25%) bloodstream infections were the most frequent, followed by pneumonia (23%), tracheobronchitis (10%), and urinary tract infection (8%) that were produced by a wide spectrum of Gram-positive (55%) and Gram-negative bacteria (30%) as well as fungi (15%). In 60% of cases, infection was associated with septic shock and a significant increase in SOFA score. Overall ICU mortality was 36% (51/140). Infection was significantly associated with death (OR 2.7, 95% CI 1.2-5.9, p = 0.015) and a longer ICU stay (p < 0.001). Bacterial and fungal nosocomial infection is a common complication of ICU admission in patients with COVID-19. It usually presents as a severe form of infection, and it is associated with a high mortality and longer course of ICU stay.


Subject(s)
COVID-19/epidemiology , Cross Infection/epidemiology , Intensive Care Units/statistics & numerical data , Aged , Bacteria/classification , Bacteria/isolation & purification , COVID-19/microbiology , COVID-19/pathology , Case-Control Studies , Critical Illness , Cross Infection/microbiology , Cross Infection/mortality , Cross Infection/pathology , Female , Fungi/classification , Fungi/isolation & purification , Hospital Mortality , Humans , Length of Stay , Male , Middle Aged , Retrospective Studies , Risk Factors , SARS-CoV-2
8.
Eur J Clin Microbiol Infect Dis ; 40(4): 683-690, 2021 Apr.
Article in English | MEDLINE | ID: mdl-33029764

ABSTRACT

Hospital-acquired pneumonia (HAP) is a significant nosocomial infection; data on the distribution and antimicrobial resistance profiles of HAP in China are limited. We included 2827 adult patients with HAP from the Chinese Antimicrobial Resistance Surveillance of Nosocomial Infections network admitted in 15 Chinese teaching hospitals between 2007 and 2016. Clinical data and antimicrobial susceptibility of isolated pathogens were obtained from the medical records and central laboratory, respectively. Multivariable logistic regression was performed to determine the risk factors for mortality and multidrug resistance (MDR). A total of 386 (13.7%) patients died in the hospital, while 1181 (41.8%) developed ventilator-associated pneumonia (VAP). Active immunosuppressant therapy (OR 1.915 (95% CI 1.475-2.487)), solid tumor (OR 1.860 (95% CI 1.410-2.452)), coma (OR 1.783 (95% CI 1.364-2.333)), clinical pulmonary infection score ≥7 (OR 1.743 (95% CI 1.373-2.212)), intensive care unit stay (OR 1.652 (95% CI 1.292-2.111)), age ≥65 years (OR 1.621 (95% CI 1.282-2.049)), and tracheal cannula insertion (OR 1.613 (95% CI 1.169-2.224)) were independent risk factors for in-hospital mortality. Liver cirrhosis (OR 3.120 (95% CI 1.436-6.780)) and six other variables were independent predictors of MDR. Acinetobacter baumannii (25.6%), Pseudomonas aeruginosa (20.1%), Klebsiella pneumoniae (15.4%), and Staphylococcus aureus (12.6%) were the most common pathogens (MDR prevalence 64.9%). Isolates from VAP patients showed more A. baumannii and less K. pneumoniae and E. coli strains (p < 0.001, respectively) than those from patients without VAP. The proportion of methicillin-resistant S. aureus strains decreased; that of carbapenem-resistant A. baumannii and Enterobacterales strains increased. There had been changes in the antibiotic resistance profiles of HAP pathogens in China. Risk factors for mortality and MDR are important for the selection of antimicrobials for HAP in China.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Bacteria/classification , Bacteria/drug effects , Cross Infection/microbiology , Pneumonia, Bacterial/microbiology , Anti-Bacterial Agents/pharmacology , China/epidemiology , Cross Infection/epidemiology , Cross Infection/pathology , Drug Resistance, Multiple, Bacterial , Humans , Pneumonia, Bacterial/epidemiology , Pneumonia, Bacterial/pathology , Prospective Studies , Risk Factors
9.
PLoS One ; 15(11): e0241756, 2020.
Article in English | MEDLINE | ID: mdl-33147266

ABSTRACT

Sit Bath Systems (SBSs) are the most common hygiene method for patients who are not self-sufficient. Therefore, the water quality of SBSs in the nosocomial environment plays a fundamental role in controlling infections for both patients and health-care workers. A long-term study on Legionella and Pseudomonas aeruginosa (P. aeruginosa) contamination was performed in SBSs (n = 20) of six Health Care Facilities (HCFs). A total of 254 water samples were analyzed following ISO procedures. The samples were positive for P. aeruginosa (46.85%) and Legionella (53.54%), respectively, both over the directive limits. Legionella isolates were identified as: Legionella pneumophila (L. pneumophila) serogroups 1, 3, and 6 and Legionella non-pneumophila species (L. anisa, L. londiniensis, L. rubrilucens, and L. nagelii). Moreover, the contamination found was studied with respect to median temperature measured (42 °C), from which two groups (A and B) could be distinguished. P. aeruginosa was found in both groups (100% of SBSs), while a higher percentage of Legionella positive samples was found in group A (75% of SBSs), compared to group B (50% of SBSs), showing how Legionella control could be carried out by using temperatures above 42 °C. An analysis of SBS water pipelines, maintenance, and disinfection treatments indicates SBSs as a new source of infection risk for both patients and health-care workers.


Subject(s)
Health Facilities , Legionella/isolation & purification , Water Microbiology , Bacterial Proteins/genetics , Cross Infection/microbiology , Cross Infection/pathology , DNA, Bacterial/chemistry , DNA, Bacterial/metabolism , Humans , Legionella/genetics , Legionella pneumophila/genetics , Legionella pneumophila/isolation & purification , Legionellosis/microbiology , Legionellosis/pathology , Legionnaires' Disease/microbiology , Legionnaires' Disease/pathology , Pseudomonas aeruginosa/genetics , Pseudomonas aeruginosa/isolation & purification , Risk Factors , Serogroup , Temperature
10.
Pancreatology ; 20(7): 1258-1261, 2020 Oct.
Article in English | MEDLINE | ID: mdl-32859545

ABSTRACT

BACKGROUND: Coronavirus disease 2019 (COVID-19) presents with myriad extra-pulmonary manifestation and a high mortality in patients with comorbidities. Its effect on patients with pre-existing acute pancreatitis is not known. METHODS: We hereby, present 3 cases with severe acute pancreatitis with persistent respiratory failure who acquired nosocomial COVID-19 during their hospital stay after recovery from respiratory failure. Their clinical course is highlighted which reflects on pathophysiology of organ dysfunction in these 2 disease states. RESULTS: None of the 3 patients with severe acute pancreatitis who developed nosocomial COVID-19 redeveloped respiratory failure due to COVID-19 despite having recently recovered from pancreatitis induced acute hypoxemic respiratory failure. Only one patient developed SARS-CoV2 induced moderate pneumonia. CONCLUSION: These cases highlight that host responses and mechanisms of lung injury might be different in severe acute pancreatitis and COVID-19.


Subject(s)
Acute Lung Injury/etiology , Coronavirus Infections/complications , Cross Infection/complications , Pancreatitis/complications , Pneumonia, Viral/complications , Acute Lung Injury/pathology , Adult , COVID-19 , Coronavirus Infections/pathology , Cross Infection/pathology , Female , Humans , Male , Pancreatitis/etiology , Pancreatitis/pathology , Pandemics , Pneumonia, Viral/pathology , Preexisting Condition Coverage , Respiratory Insufficiency/etiology , Respiratory Insufficiency/therapy , Treatment Outcome
12.
PLoS One ; 15(6): e0234127, 2020.
Article in English | MEDLINE | ID: mdl-32492060

ABSTRACT

Several studies have shown the ubiquitous presence of bacteria in hospital surfaces, staff, and patients. Frequently, these bacteria are related to HAI (healthcare-associated infections) and carry antimicrobial resistance (AMR). These HAI-related bacteria contribute to a major public health issue by increasing patient morbidity and mortality during or after hospital stay. Bacterial high-throughput amplicon gene sequencing along with identification of AMR genes, as well as whole genome sequencing (WGS), are biotechnological tools that allow multiple-sample screening for a diversity of bacteria. In this paper, we used these methods to perform a one-year cross sectional profiling of bacteria and AMR genes in adult and neonatal intensive care units (ICU and NICU) in a Brazilian public, tertiary hospital. Our results showed high abundances of HAI-related bacteria such as S. epidermidis, S. aureus, K. pneumoniae, A. baumannii complex, E. coli, E. faecalis, and P. aeruginosa in patients and hospital surfaces. Most abundant AMR genes detected throughout ICU and NICU were mecA, blaCTX-M-1 group, blaSHV-like, and blaKPC-like. We found that NICU environment and patients were more widely contaminated with pathogenic bacteria than ICU. Patient samples, despite the higher bacterial load, have lower bacterial diversity than environmental samples in both units. Finally, we also identified contamination hotspots in the hospital environment showing constant frequencies of bacterial and AMR contamination throughout the year. Whole genome sequencing (WGS), 16S rRNA oligotypes, and AMR identification allowed a high-resolution characterization of the hospital microbiome profile.


Subject(s)
Bacteria/genetics , Drug Resistance, Bacterial/genetics , Adult , Anti-Bacterial Agents/pharmacology , Anti-Infective Agents/pharmacology , Bacteria/drug effects , Bacteria/isolation & purification , Bacterial Load , Brazil , Cross Infection/microbiology , Cross Infection/pathology , Cross-Sectional Studies , Drug Resistance, Bacterial/drug effects , Escherichia coli/drug effects , Escherichia coli/genetics , Escherichia coli/isolation & purification , Humans , Infant, Newborn , Intensive Care Units , Intensive Care Units, Neonatal , RNA, Ribosomal, 16S/chemistry , RNA, Ribosomal, 16S/genetics , RNA, Ribosomal, 16S/metabolism , Staphylococcus aureus/drug effects , Staphylococcus aureus/genetics , Staphylococcus aureus/isolation & purification , Tertiary Care Centers , Whole Genome Sequencing
13.
Sci Rep ; 10(1): 7701, 2020 05 07.
Article in English | MEDLINE | ID: mdl-32382070

ABSTRACT

Clostridioides difficile is the leading cause of nosocomial infections and a worldwide urgent public health threat. Without doubt, there is an urgent need for new effective anticlostridial agents due to the increasing incidence and severity of C. difficile infection (CDI). The aim of the present study is to investigate the in vivo efficacy of auranofin (rheumatoid arthritis FDA-approved drug) in a CDI mouse model and establish an adequate dosage for treatment. The effects of increased C. difficile inoculum, and pre-exposure to simulated gastric intestinal fluid (SGF) and simulated intestinal fluid (SIF), on the antibacterial activity of auranofin were investigated. Auranofin's in vitro antibacterial activity was stable in the presence of high bacterial inoculum size compared to vancomycin and fidaxomicin. Moreover, it maintained its anti-C. difficile activity after being exposed to SGF and SIF. Upon testing in a CDI mouse model, auranofin at low clinically achievable doses (0.125 mg/kg and 0.25 mg/kg) significantly protected mice against CDI with 100% and 80% survival, respectively. Most importantly, auranofin (0.125 mg/kg and 0.25 mg/kg) significantly prevented CDI recurrence when compared with vancomycin. Collectively, these results indicate that auranofin could potentially provide an effective, safe and quick supplement to the current approaches for treating CDI.


Subject(s)
Auranofin/pharmacology , Clostridioides difficile/drug effects , Clostridium Infections/drug therapy , Cross Infection/drug therapy , Animals , Anti-Bacterial Agents/pharmacology , Arthritis, Rheumatoid/drug therapy , Clostridioides difficile/pathogenicity , Clostridium Infections/microbiology , Clostridium Infections/pathology , Cross Infection/microbiology , Cross Infection/pathology , Drug Repositioning , Fidaxomicin/pharmacology , Gastrointestinal Tract/drug effects , Gastrointestinal Tract/microbiology , Humans , Mice , Microbial Sensitivity Tests , Recurrence , Vancomycin/pharmacology
14.
J Infect Public Health ; 13(8): 1166-1171, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32276873

ABSTRACT

BACKGROUND: The infectious complications in hemodialysis patients are still among the main reasons for their increased morbidity and mortality. The possible reasons behind this might be due to impairments in the host defense mechanisms, comorbidities, invasive procedures and pathogenicity of the infecting organisms. With the increased incidence of bacteremia in hemodialysis patients and the overt use of antibiotics, we have witnessed a rise in the number of new multidrug resistant (MDR) strains in those patients. AIM: We aim to determine the epidemiology, risk factors and complications of infections in patients receiving chronic hemodialysis, particularly bloodstream infections. METHODS: This is a retrospective case-control study involving patients undergoing hemodialysis at a tertiary care center. We studied the prevalence of infectious complications among those patients as well as the responsible agent in each respective infectious episode and the risk factors associated with bacteremia. FINDINGS: 46.6% of the studied population had at least one documented episode of infection. The most common were blood and respiratory infections (33.2% and 32.7% respectively). Among patients with bacteremia, coagulase-negative Staphylococcus was the predominant pathogen (49% of cases), followed by Staphylococcus aureus and Escherichia coli. Mortality was higher in patients who had MDR bacteremia, and in those who had mechanical ventilation or intensive care unit (ICU) admission. CONCLUSION: Due to the alarming increase in the incidence of infection among hemodialysis patients and its strong association with mortality, further studies are needed to look for risk factors associated with infection and for ways to control those risk factors.


Subject(s)
Bacteremia , Renal Dialysis , Bacteremia/epidemiology , Bacteremia/etiology , Bacteremia/microbiology , Bacteremia/pathology , Case-Control Studies , Chronic Disease , Cross Infection/microbiology , Cross Infection/pathology , Humans , Renal Dialysis/adverse effects , Retrospective Studies , Risk Factors
15.
PLoS One ; 15(3): e0230115, 2020.
Article in English | MEDLINE | ID: mdl-32160260

ABSTRACT

PURPOSE: To provide a new system of in-hospital blood glucose team management combined with a network blood glucose monitoring system and analyse the effect on hyperglycaemic participants' blood glucose control in noncritical care units. METHODS: Hyperglycaemic participants in noncritical care units were divided into two groups. They underwent active intervention by the hospital's blood glucose management team or the routine consultation group. The better method, based on a shorter length of stay (LOS) and lower hospital cost, could be selected by comparing the two blood glucose management strategies. RESULTS: Compared with the routine consultation group, the team management group had a higher detection rate of hyperglycaemia (18.49% vs 16.17%, P<0.01) and glycosylated haemoglobin (51.53% vs 30.97%, P<0.01) and a lower incidence rate of hyperglycaemia (59.24% vs 61.59%, P<0.01), severe hyperglycaemia (3.56% vs 5.19%, P<0.01) and clinically significant hypoglycaemia (0.26% vs 0.35%, P<0.05). Simultaneously, blood glucose drift (mmol/L) (2.50 (1.83, 3.25) vs 2.76 (2.01, 3.57), P<0.01), blood glucose coefficient of variation (%) (28.86 (22.70, 34.83) vs 29.80 (23.47, 36.13), P<0.01), maximum blood glucose fluctuation (mmol/L) (9.30 (6.20, 13.10) vs 10.10 (7.00, 14.40), P<0.01) and nosocomial infection (5.42% vs 8.05%, P<0.05) were all lower among participants in the team management group. In addition, the LOS (P<0.001) and hospital costs (P<0.001) of participants were lower in the team management group. CONCLUSION: In-hospital blood glucose team management combined with a network blood glucose monitoring system effectively improved the blood glucose control and fluctuation levels of participants who were admitted to noncritical care units, thereby reducing LOS and hospital cost.


Subject(s)
Blood Glucose/analysis , Hyperglycemia/prevention & control , Aged , Cross Infection/complications , Cross Infection/pathology , Female , Glycated Hemoglobin/analysis , Hospital Costs , Hospitalization , Humans , Hyperglycemia/complications , Hyperglycemia/epidemiology , Hyperglycemia/pathology , Length of Stay , Linear Models , Male , Middle Aged , Monitoring, Physiologic , Retrospective Studies , Severity of Illness Index
16.
Sci Rep ; 10(1): 4438, 2020 03 10.
Article in English | MEDLINE | ID: mdl-32157186

ABSTRACT

The purpose of this study was to evaluate risk factors of Clostridium Difficile infection (CDI) after spinal surgery using the Health Insurance Review and Assessment Service (HIRA) data. The incidence of postoperative CDI was investigated using HIRA data from 2012 to 2016. Cases involving CDI that occurred within a 30-day postoperative period were identified. Risk factors, including age, sex, comorbidities, postoperative infection, spinal surgery procedure, type of antibiotic, and duration of antibiotic use, were evaluated. Duration of hospital stay, medical cost, and mortality were also evaluated. In total, 71,322 patients were included. Presumed cases of CDI were identified in 57 patients, with CDI rate of 0.54 per 10,000 patient days. Advanced age, staged operation, postoperative infection, and the use of multiple antibiotics were significant risk factors. First-generation cephalosporins were shown to be associated with a lower incidence of CDI. CDI was also associated with longer hospital stays and increased medical cost, and it was an independent risk factor for increased mortality. Extra attention should be paid to patients at high risk for the development of postoperative CDI, and unnecessary use of multiple antibiotics should be avoided. Level of Evidence: Level III, retrospective cohort study.


Subject(s)
Clostridioides difficile/isolation & purification , Clostridium Infections/etiology , Cross Infection/etiology , Databases, Factual , Neurosurgical Procedures/adverse effects , Postoperative Complications/etiology , Spinal Diseases/surgery , Adolescent , Adult , Aged , Anti-Bacterial Agents/administration & dosage , Child , Child, Preschool , Clostridium Infections/drug therapy , Clostridium Infections/pathology , Comorbidity , Cross Infection/pathology , Female , Humans , Infant , Infant, Newborn , Length of Stay/statistics & numerical data , Male , Middle Aged , National Health Programs , Postoperative Complications/pathology , Retrospective Studies , Risk Factors , Spinal Diseases/pathology , Young Adult
17.
Microb Drug Resist ; 26(3): 227-237, 2020 Mar.
Article in English | MEDLINE | ID: mdl-31545121

ABSTRACT

Background: The use of antimicrobials and myeloablative chemotherapy regimens has promoted multiresistant microorganisms to emerge as nosocomial pathogens, such as vancomycin-resistant Enterococcus faecium (VREfm). We described a polyclonal outbreak of bloodstream infection caused by Efm in a hemato-oncological ward in Mexico. Our aim was to describe the clonal complex (CC) of the Efm strains isolated in the outbreak in comparison with commensal and environmental isolates. Methodology: Sixty Efm clinical, environmental, and commensal strains were included. We constructed a cladogram and a phylogenetic tree using Vitek and Multilocus sequence typing data, respectively. Results: We reported 20 new sequence types (ST), among which 17/43 clinical isolates belonged to CC17. The predominant ST in the clinical strains were ST757, ST1304, ST412, and ST770. Neither environmental nor commensal isolates belonged to CC17. The phylogeny of our collection shows that the majority of the clinical isolates were different from the environmental and commensal isolates, and only a small group of clinical isolates was closely related with environmental and commensal isolates. The cladogram revealed a similar segregation to that of the phylogeny. Conclusions: We found a high diversity among clinical, environmental, and commensal strains in a group of samples in a single hospital. Highest diversity was found between commensal and environmental isolates.


Subject(s)
Bacteremia/epidemiology , Cross Infection/epidemiology , Enterococcus faecium/genetics , Gram-Positive Bacterial Infections/epidemiology , Phylogeny , Vancomycin-Resistant Enterococci/genetics , Adult , Anti-Bacterial Agents/therapeutic use , Bacteremia/drug therapy , Bacteremia/microbiology , Bacteremia/pathology , Bacterial Typing Techniques , Clone Cells , Cross Infection/drug therapy , Cross Infection/microbiology , Cross Infection/pathology , Enterococcus faecium/classification , Enterococcus faecium/drug effects , Enterococcus faecium/isolation & purification , Female , Genetic Variation , Genotype , Gram-Positive Bacterial Infections/drug therapy , Gram-Positive Bacterial Infections/microbiology , Gram-Positive Bacterial Infections/pathology , Hematologic Neoplasms/microbiology , Hematologic Neoplasms/pathology , Humans , Male , Mexico/epidemiology , Multilocus Sequence Typing , Phenotype , Symbiosis/physiology , Tertiary Care Centers , Vancomycin-Resistant Enterococci/classification , Vancomycin-Resistant Enterococci/drug effects , Vancomycin-Resistant Enterococci/isolation & purification
18.
New Microbiol ; 43(1): 17-21, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31814033

ABSTRACT

The aim of this retrospective study was to highlight the differences in antibiotic resistance between Hospital-acquired and Community-acquired urinary tract infections (UTIs). Antimicrobial UTIs resistance data were collected from March 2011 to March 2018. Uropathogens were identified from 41,715 patients using routine laboratory methods. Differences in antibiotic resistance between Hospital and Community (non-hospitalized) patients were statistically validated. Odds ratio (OR) and p-values was used to determine whether a particular exposure (hospitalization) was a risk factor for a particular outcome (higher antibiotic resistance). We reported a general increase of unnecessary urine cultures in both community and hospital patients. The most representative microorganism isolated from Community (58.2%) and Hospital (47.6%) was E. coli. UTIs causative bacteria in hospitalized patients was more than twice as resistant to Trimetoprim/sulphamethoxazole (OR 2.26) and Imipenem (OR 2.56), for Gram-positive and Gram-negative, respectively, than in Community patients. Nitrofurantoin was the only agent without differences in resistance rate between community and hospital UTIs. Therefore, physicians could use it as a definitive therapy for uncomplicated cystitis and as a prophylactic agent for recurrent uncomplicated cystitis. With this work we provided a general protocol applicable by physicians to select the most suitable, if necessary, UTIs empiric treatment.


Subject(s)
Bacterial Infections , Community-Acquired Infections , Cross Infection , Tertiary Care Centers , Urinary Tract Infections , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Bacteria/drug effects , Bacteria/isolation & purification , Bacterial Infections/drug therapy , Bacterial Infections/microbiology , Bacterial Infections/pathology , Community-Acquired Infections/drug therapy , Community-Acquired Infections/microbiology , Community-Acquired Infections/pathology , Cross Infection/drug therapy , Cross Infection/microbiology , Cross Infection/pathology , Drug Resistance, Bacterial , Humans , Retrospective Studies , Tertiary Care Centers/statistics & numerical data , Urinary Tract Infections/drug therapy , Urinary Tract Infections/microbiology , Urinary Tract Infections/pathology
19.
Am J Infect Control ; 47(12): 1493-1499, 2019 12.
Article in English | MEDLINE | ID: mdl-31296346

ABSTRACT

BACKGROUND: Invasive group A streptococcal (iGAS) infection in the peripartum setting is a rare but devastating disease occasionally occurring as a health care-associated infection (HAI). Current guidelines suggest enhanced surveillance and streptococcal isolate storage after a single case of iGAS, as well as a full epidemiological investigation that includes screening health care workers (HCWs) from several sites after 2 cases. Current guidelines do not recommend routine screening of household members of a patient with iGAS. METHODS: We conducted studies of 3 patients with iGAS puerperal sepsis and related epidemiologic and molecular investigations. RESULTS: Identical GAS emm gene types were found in pharyngeal cultures of 3 asymptomatic spouses of patients with iGAS puerperal sepsis. HCWs screened negative for GAS, and emm typing indicated that other iGAS cases from this hospital were sporadic and not related to the puerperal cases. CONCLUSIONS: The concurrent presence of the same emm type in a household member practically excludes the option of an inadvertent HAI or facility outbreak. Hence, we suggest that screening close family members for asymptomatic GAS carriage should be performed early as a part of infection prevention measures, as doing so would have significant utility in saving time and resources related to a full epidemiological inquiry.


Subject(s)
Cross Infection/diagnosis , Family Characteristics , Puerperal Infection/diagnosis , Streptococcal Infections/diagnosis , Streptococcus pyogenes/pathogenicity , Adult , Antigens, Bacterial/genetics , Asymptomatic Infections , Bacterial Outer Membrane Proteins/genetics , Bacterial Typing Techniques , Carrier Proteins/genetics , Cross Infection/microbiology , Cross Infection/pathology , Epidemiological Monitoring , Female , Gene Expression , Health Personnel , Humans , Parturition , Practice Guidelines as Topic , Pregnancy , Puerperal Infection/microbiology , Puerperal Infection/pathology , Spouses , Streptococcal Infections/microbiology , Streptococcal Infections/pathology , Streptococcus pyogenes/genetics , Streptococcus pyogenes/isolation & purification
20.
Curr Pharm Biotechnol ; 20(8): 658-664, 2019.
Article in English | MEDLINE | ID: mdl-31258073

ABSTRACT

BACKGROUND: Healthcare-associated infections (HCAIs) occur when patients receiving treatment in a health care setting develop an infection. They represent a major public health problem, requiring the integration of clinical medicine, pathology, epidemiology, laboratory sciences, and, finally, forensic medicine. METHODS: The determination of cause of death is fundamental not only in the cases of presumed malpractice to ascertain the causal link with any negligent behavior both of health facilities and of individual professionals, but also for epidemiological purposes since it may help to know the global burden of HCAIs, that remains undetermined because of the difficulty of gathering reliable diagnostic data. A complete methodological approach, integrating clinical data by means of autopsy and histological and laboratory findings aiming to identify and demonstrate the host response to infectious insult, is mandatory in HCAIs related deaths. RESULTS: Important tasks for forensic specialists in hospitals and health services centers are the promotion of transparency and open communication by health-care workers on the risk of HCAIs, thus facilitating patients' engagement and the implementation of educational interventions for professionals aimed to improve their knowledge and adherence to prevention and control measures. CONCLUSION: HCAIs are a major problem for patient safety in every health-care facility and system around the world and their control and prevention represent a challenging priority for healthcare institution and workers committed to making healthcare safer. Clinicians are at the forefront in the war against HCAIs, however, also forensic pathologists have a remarkable role.


Subject(s)
Cause of Death/trends , Cross Infection/epidemiology , Delivery of Health Care/standards , Forensic Medicine , Hospitals/standards , Autopsy , Cross Infection/pathology , Humans
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