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1.
Nature ; 598(7879): 32, 2021 10.
Article in English | MEDLINE | ID: mdl-34611357
2.
FEBS J ; 288(14): 4160-4164, 2021 07.
Article in English | MEDLINE | ID: mdl-34286923

ABSTRACT

This 75th birthday tribute to our Editorial Board member Alexander Wlodawer recounts his decades-long service to the community of structural biology researchers. His former and current colleagues tell the story of his upbringing and education, followed by an account of his dedication to quality and rigor in crystallography and structural science. The FEBS Journal Editor-in-Chief Seamus Martin further highlights Alex's outstanding contributions to the journal's success over many years.


Subject(s)
Crystallography/history , Molecular Biology/history , History, 20th Century , History, 21st Century , Humans
3.
J Biol Chem ; 296: 100745, 2021.
Article in English | MEDLINE | ID: mdl-33957119

ABSTRACT

Fifty years ago, the first landmark structures of antibodies heralded the dawn of structural immunology. Momentum then started to build toward understanding how antibodies could recognize the vast universe of potential antigens and how antibody-combining sites could be tailored to engage antigens with high specificity and affinity through recombination of germline genes (V, D, J) and somatic mutation. Equivalent groundbreaking structures in the cellular immune system appeared some 15 to 20 years later and illustrated how processed protein antigens in the form of peptides are presented by MHC molecules to T cell receptors. Structures of antigen receptors in the innate immune system then explained their inherent specificity for particular microbial antigens including lipids, carbohydrates, nucleic acids, small molecules, and specific proteins. These two sides of the immune system act immediately (innate) to particular microbial antigens or evolve (adaptive) to attain high specificity and affinity to a much wider range of antigens. We also include examples of other key receptors in the immune system (cytokine receptors) that regulate immunity and inflammation. Furthermore, these antigen receptors use a limited set of protein folds to accomplish their various immunological roles. The other main players are the antigens themselves. We focus on surface glycoproteins in enveloped viruses including SARS-CoV-2 that enable entry and egress into host cells and are targets for the antibody response. This review covers what we have learned over the past half century about the structural basis of the immune response to microbial pathogens and how that information can be utilized to design vaccines and therapeutics.


Subject(s)
Adaptive Immunity , Antibodies, Viral/chemistry , Antigens, Viral/chemistry , Immunity, Innate , Receptors, Antigen, T-Cell/chemistry , Receptors, Cytokine/chemistry , SARS-CoV-2/immunology , Allergy and Immunology/history , Animals , Antibodies, Viral/genetics , Antibodies, Viral/immunology , Antibody Specificity , Antigen Presentation , Antigens, Viral/genetics , Antigens, Viral/immunology , COVID-19/immunology , COVID-19/virology , Crystallography/history , Crystallography/methods , History, 20th Century , History, 21st Century , Humans , Protein Folding , Protein Interaction Domains and Motifs , Receptors, Antigen, T-Cell/genetics , Receptors, Antigen, T-Cell/immunology , Receptors, Cytokine/genetics , Receptors, Cytokine/immunology , SARS-CoV-2/pathogenicity , V(D)J Recombination
5.
Acta Crystallogr D Struct Biol ; 77(Pt 5): 703-711, 2021 May 01.
Article in English | MEDLINE | ID: mdl-33950024

ABSTRACT

The importance of the Fourier transform as a fundamental tool for crystallography is well known in the field. However, the complete legacy of Jean-Baptiste Joseph Fourier (1768-1830) as a pioneer Egyptologist and premier mathematician and physicist of his time, and the implications of his work in other scientific fields, is less well known. Significantly, his theoretical and experimental work on phenomena related to the transmission of heat founded the mathematical study of irreversible phenomena and introduced the flow of time in physico-chemical processes and geology, with its implications for biological evolution. Fourier's insights are discussed in contrast to the prevalent notion of reversible dynamic time in the early 20th century, which was dominated by Albert Einstein's (1875-1953) theory of general relativity versus the philosophical notion of durée proposed by the French philosopher Henri-Louis Bergson (1859-1941). The current status of the mathematical description of irreversible processes by Ilya Romanovich Prigogine (1917-2003) is briefly discussed as part of the enduring legacy of the pioneering work of J.-B. J. Fourier, first established nearly two centuries ago, in numerous scientific endeavors.


Subject(s)
Crystallography/history , History, 18th Century
6.
Acta Crystallogr D Struct Biol ; 75(Pt 6): 523-527, 2019 Jun 01.
Article in English | MEDLINE | ID: mdl-31205014

ABSTRACT

Michael George Rossmann, who made monumental contributions to science, passed away peacefully in West Lafayette, Indiana on 14 May 2019 at the age of 88, following a courageous five-year battle with cancer. Michael was born in Frankfurt, Germany on 30 July 1930. As a young boy, he emigrated to England with his mother just as World War II ignited. Michael was a highly innovative and energetic person, well known for his intensity, persistence and focus in pursuing his research goals. Michael was a towering figure in crystallography as a highly distinguished faculty member at Purdue University for 55 years. Michael made many seminal contributions to crystallography in a career that spanned the entirety of structural biology, beginning in the 1950s at Cambridge where the first protein structures were determined in the laboratories of Max Perutz (hemoglobin, 1960) and John Kendrew (myoglobin, 1958). Michael's work was central in establishing and defining the field of structural biology, which amazingly has described the structures of a vast array of complex biological molecules and assemblies in atomic detail. Knowledge of three-dimensional biological structure has important biomedical significance including understanding the basis of health and disease at the molecular level, and facilitating the discovery of many drugs.


Subject(s)
Crystallography/history , Macromolecular Substances/history , Viruses/ultrastructure , Awards and Prizes , History, 20th Century , Humans , Macromolecular Substances/ultrastructure
10.
Postepy Biochem ; 62(3): 280-285, 2016.
Article in English | MEDLINE | ID: mdl-28132482

ABSTRACT

Collaborations between the Wlodawer and Skalka laboratories have covered a period of almost 30 years. During that time our groups have co-authored 18 publications, including several much cited journal articles, book chapters, and scholarly reviews. It has therefore been most rewarding for us to share enthusiasm, insights, and expertise with our Frederick colleagues over the years, and also to enjoy lasting friendships.


Subject(s)
Biochemistry/history , Crystallography/history , Retroviridae Proteins/chemistry , Retroviridae/enzymology , Crystallography/methods , History, 20th Century , History, 21st Century , Protein Conformation , Retroviridae Proteins/metabolism , United States
11.
Ann Sci ; 72(2): 206-23, 2015 Apr.
Article in English | MEDLINE | ID: mdl-26104165

ABSTRACT

William Barlow (1845-1934) was an important if unconventional scientist, known for having developed the 'closest-packing' atomic models of crystal structure. He resumed an early nineteenth-century tradition of utilizing crystallographical and chemical data to determine atomic arrangements in crystals. This essay recounts Barlow's career and scientific activity in three parts: (a) His place in the tradition of determining atomic arrangement in context of this earlier tradition and of contemporaneous developments of crystallography and chemistry, (b) his unconventional career, and (c) the 'success' of his program to determine atomic arrangements in crystals and its influence on the work of William Lawrence Bragg.


Subject(s)
Crystallography/history , England , History, 19th Century , History, 20th Century
13.
J Assoc Physicians India ; 63(8): 94-5, 2015 08.
Article in English | MEDLINE | ID: mdl-27604448

ABSTRACT

George Minot (1885-1950) was born in Boston, Massachusetts. He was great grandson of James Jackson, co-founder of Massachusetts General Hospital in 1821. Graduating from Harvard College he enrolled at Harvard Medical School and obtained his MD in 1912. As a house pupil (intern) at the hospital he became interested in diseases of the blood and began taking meticulous histories of dietary habits of patients with anemia.


Subject(s)
Anemia, Pernicious/history , Crystallography/history , Philately , Vitamin B 12/history , Anemia, Pernicious/therapy , History, 20th Century , Humans , Nobel Prize , United States , Vitamin B 12/pharmacology
16.
J Comput Aided Mol Des ; 28(10): 1009-14, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25062767

ABSTRACT

The Protein Data Bank archive was established in 1971, and recently celebrated its 40th anniversary (Berman et al. in Structure 20:391, 2012). An analysis of interrelationships of the science, technology and community leads to further insights into how this resource evolved into one of the oldest and most widely used open-access data resources in biology.


Subject(s)
Crystallography/history , Databases, Protein , Databases, Protein/standards , History, 20th Century , History, 21st Century , Information Dissemination , Internet , Proteins/chemistry , Reproducibility of Results
17.
Chimia (Aarau) ; 68(1-2): 54-9, 2014.
Article in English | MEDLINE | ID: mdl-24801698

ABSTRACT

The first protein crystallography group in Switzerland was installed at the Biozentrum of the University of Basel approximately 40 years ago. Since then protein crystallography has grown and matured remarkably and is now established in the molecular biology, biochemistry or biological medicine departments of most major Swiss Universities as well as in the pharmaceutical industry and in biotech startup companies. Swiss X-ray biocrystallography groups have made remarkable contributions from the beginning and have brought Switzerland to the forefront in biostructural research during the last 5 to 10 years. Switzerland has now a leading position in the areas of supramolecular complexes, membrane proteins and structure-based drug design in pharmaceutical and biotech industries. Protein crystallography on the outer membrane protein ompF as well as the development of the lipidic cubic phase crystallization methodology has been pioneered at the Biozentrum. The latter found its somewhat late recognition through the recent explosion in structure determinations of the seven transmembrane helix G-coupled receptors. Highlights from Swiss structural biology groups in the field of supramolecular complexes include the structures of ribosomal particles, of the nucleosome and the pilus assembly complex of uropathogenic E. coli. On the membrane protein side advances in the field of ABC transporters and ion channels are world-recognized achievements of Swiss structural biology. Dedicated laboratories at many academic and industrial institutions, their current research programs, the availability of excellent infrastructure and the continuing efforts to build new facilities such as the SwissFEL indicate an even brighter future for structural biology in Switzerland.


Subject(s)
Biochemistry/methods , Crystallography/methods , Proteins/chemistry , Biochemistry/history , Crystallography/history , History, 20th Century , History, 21st Century , Models, Molecular , Molecular Biology/history , Molecular Biology/methods , Protein Conformation , Switzerland
18.
Genome Biol ; 14(4): 402, 2013 Apr 25.
Article in English | MEDLINE | ID: mdl-23651528

ABSTRACT

On April 25th 1953, three publications in Nature forever changed the face of the life sciences in reporting the structure of DNA. Sixty years later, Raymond Gosling shares his memories of the race to the double helix.


Subject(s)
Crystallography/history , DNA/chemistry , Genetics/history , DNA/genetics , England , History, 20th Century
19.
Top Curr Chem ; 340: 1-20, 2013.
Article in English | MEDLINE | ID: mdl-23666078

ABSTRACT

In this chapter some background material concerning molecular chirality and enantiomerism is presented. First some basic chemical-molecular aspects of chirality are reviewed, after which certain relevant terminology whose use in the literature has been problematic is discussed. Then an overview is provided of some of the early discoveries that laid the foundations of the science of molecular chirality in chemistry and biology, including the discovery of the phenomenon of molecular chirality by L. Pasteur, the proposals for the asymmetric carbon atom by J.H. van 't Hoff and J.A. Lebel, Pasteur's discovery of biological enantioselectivity, the discovery of enantioselectivity at biological receptors by A. Piutti, the studies of enzymatic stereoselectivity by E. Fischer, and the work on enantioselectivity in pharmacology by A. Cushny. Finally, the role of molecular chirality in pharmacotherapy and new-drug development, arguably one of the main driving forces for the current intense interest in the phenomenon of molecular chirality, is discussed.


Subject(s)
Chemistry, Analytic/history , Chemistry, Pharmaceutical/history , Biochemical Phenomena , Carbon/chemistry , Crystallography/history , History, 19th Century , History, 20th Century , Stereoisomerism , Tartrates/chemistry , Terminology as Topic
20.
Acta Crystallogr A ; 69(Pt 1): 60-2, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23250062

ABSTRACT

The influences of Lawrence Bragg and Max Perutz are evident in the contemporary emphasis on 'structural enablement' in drug discovery. On this occasion of the centenary of Bragg's equation, his role in supporting the earliest structural studies of biological materials at the Cavendish Laboratory is remembered. The 1962 Nobel Prizes for the structures of DNA and proteins marked the golden anniversary of the von Laue and Bragg discoveries.


Subject(s)
Crystallography/history , Drug Discovery/history , Nobel Prize , Antiviral Agents/chemistry , Antiviral Agents/pharmacology , Crystallography/methods , DNA/chemistry , Drug Discovery/methods , History, 20th Century , Humans , Influenza A virus/enzymology , Influenza, Human/drug therapy , Influenza, Human/virology , Models, Molecular , Neuraminidase/chemistry , Neuraminidase/metabolism , Proteins/chemistry
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