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1.
Protein Expr Purif ; 192: 106041, 2022 04.
Article in English | MEDLINE | ID: mdl-34953978

ABSTRACT

The gene encoding the cAMP-dependent protein kinase (PKA) catalytic subunit-like protein PKAC1 from the Venezuelan TeAp-N/D1 strain of Trypanosoma equiperdum was cloned, and the recombinant TeqPKAC1 protein was overexpressed in bacteria. A major polypeptide with an apparent molecular mass of ∼38 kDa was detected by SDS-polyacrylamide gel electrophoresis, and immunoblotting using antibodies against the human PKA catalytic subunit α. Unfortunately, most of the expressed TeqPKAC1 was highly insoluble. Polypeptides of 36-38 kDa and 45-50 kDa were predominantly seen by immunoblotting in the bacterial particulate and cytosolic fractions, respectively. Since the incorporation of either 4% Triton X-100 or 3% sarkosyl or a mixture of 10 mM MgCl2 and 1 mM ATP (MgATP) improved the solubilization of TeqPKAC1, we used a combination of Triton X-100, sarkosyl and MgATP to solubilize the recombinant protein. TeqPKAC1 was purified by first reconstituting a hybrid holoenzyme between the recombinant protein and a mammalian poly-His-tagged PKA regulatory subunit that was immobilized on a Ni2+-chelating affinity resin, and then by eluting TeqPKAC1 using cAMP. TeqPKAC1 was functional given that it was capable of phosphorylating PKA catalytic subunit substrates, such as kemptide (LRRASLG), histone type II-AS, and the peptide SP20 (TTYADFIASGRTGRRNSIHD), and was inhibited by the peptide IP20 (TTYADFIASGRTGRRNAIHD), which contains the inhibitory motif of the PKA-specific heat-stable inhibitor PKI-α. Optimal enzymatic activity was obtained at 37 °C and pH 8.0-9.0; and the order of effectiveness of nucleotide triphosphates and divalent cations was ATP ¼ GTP â‰… ITP and Mg2+ â‰… Mn2+ â‰… Fe2+ ¼ Ca2+ â‰… Zn2, respectively.


Subject(s)
Cloning, Molecular , Cyclic AMP-Dependent Protein Kinases/genetics , Cyclic AMP-Dependent Protein Kinases/metabolism , Cyclic AMP/metabolism , Protozoan Proteins/genetics , Protozoan Proteins/metabolism , Trypanosoma/enzymology , Cyclic AMP/genetics , Cyclic AMP-Dependent Protein Kinases/chemistry , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Phosphorylation , Protein Subunits/chemistry , Protein Subunits/genetics , Protein Subunits/isolation & purification , Protein Subunits/metabolism , Protozoan Proteins/chemistry , Protozoan Proteins/isolation & purification , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Solubility , Trypanosoma/chemistry , Trypanosoma/genetics
2.
Biochimie ; 168: 110-123, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31704351

ABSTRACT

An enriched fraction of an inhibitor of both the catalytic subunit of the cAMP-dependent protein kinase (PKA) from pig heart and a Trypanosoma equiperdum PKA catalytic subunit-like protein (TeqC-like) was obtained from the soluble fraction of T. equiperdum parasites after three consecutive purification steps: sedimentation through a linear 5-20% sucrose gradient, diethylaminoethyl-Sepharose anion-exchange chromatography, and Bio-Sil Sec-400-S size-exclusion high-performance liquid chromatography. The inhibitor was identified as the T. equiperdum PKA regulatory subunit-like protein (TeqR-like) on the basis of Western blot and mass spectrometry analyses, and behaved as an uncompetitive or anti-competitive inhibitor of the parasite TeqC-like protein, with respect to a fluorescently labeled substrate (kemptide, sequence: LRRASLG), showing a Ki of 1.17 µM. The isolated protein possesses a molecular mass of 57.54 kDa, a Stokes radius of 3.64 nm, and a slightly asymmetric shape with a frictional ratio f/fo = 1.43. As revealed during the purification steps and by immunoprecipitation experiments, the TeqR-like and TeqC-like proteins were not associated forming a heterooligomeric complex, differing from traditional PKA subunits. Co-immunoprecipitation results followed by mass spectrometry sequencing identified two isoforms of the parasite heat-shock protein 70, α-tubulin, and ß-tubulin as candidates that interact with the TeqR-like protein in T. equiperdum.


Subject(s)
Cyclic AMP-Dependent Protein Kinases , Protein Subunits/chemistry , Trypanosoma/enzymology , Animals , Cyclic AMP-Dependent Protein Kinases/chemistry , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Ligands , Swine
3.
ChemMedChem ; 13(18): 1988-1996, 2018 09 19.
Article in English | MEDLINE | ID: mdl-30058283

ABSTRACT

A ligand-binding study is presented focusing on thermodynamics of fragment expansion. The binding of four compounds with increasing molecular weight to protein kinase A (PKA) was analyzed. The ligands display affinities between low-micromolar to nanomolar potency despite their low molecular weight. Binding free energies were measured by isothermal titration calorimetry, revealing a trend toward more entropic and less enthalpic binding with increase in molecular weight. All protein-ligand complexes were analyzed by crystallography and solution NMR spectroscopy. Crystal structures and solution NMR data are highly consistent, and no major differences in complex dynamics across the series are observed that would explain the differences in the thermodynamic profiles. Instead, the thermodynamic trends result either from differences in the solvation patterns of the conformationally more flexible ligand in aqueous solution prior to protein binding as molecular dynamics simulations suggest, or from local shifts of the water structure in the ligand-bound state. Our data thus provide evidence that changes in the solvation pattern constitute an important parameter for the understanding of thermodynamic data in protein-ligand complex formation.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/chemistry , Sulfonamides/chemistry , Thermodynamics , Water/chemistry , Animals , CHO Cells , Cricetulus , Crystallography, X-Ray , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Cyclic AMP-Dependent Protein Kinases/metabolism , Dose-Response Relationship, Drug , Hydrophobic and Hydrophilic Interactions , Ligands , Models, Molecular , Molecular Structure , Molecular Weight , Structure-Activity Relationship
4.
Biosens Bioelectron ; 109: 132-138, 2018 Jun 30.
Article in English | MEDLINE | ID: mdl-29550736

ABSTRACT

In this work, a novel and sensitive electrogenerated chemiluminescence (ECL) biosensor for protein kinase A (PKA) activity analysis and relevant inhibitor screening was proposed based on bimetallic catalysis signal amplification and recognition of Au and Pt nanoparticles loaded metal-organic frameworks (Au&Pt@UiO-66) nanocomposite. After being phosphorylated by PKA in the presence of ATP, Au&Pt@UiO-66 probes were specifically chelated to the modified electrode by forming Zr-O-P bonds between the surface defects of UiO-66 and the phosphorylated kemptide. Due to the high synergistic catalysis of Au&Pt@UiO-66 nanocomposites to the luminol-H2O2 reaction, the ECL signal of luminol was greatly enhanced. Moreover, UiO-66 afford numerous Zr defect sites for high efficient phosphate group recognition, and can also prevent the nanoparticles from aggregating during catalytic reactions. Thus, the excellent performance of the ECL biosensor with high sensitivity and superior stability was obtained. Under the optimized conditions, the detection limit for PKA activity was 0.009 UmL-1 (S/N = 3). Meanwhile, the ECL biosensor was successfully applied in inhibitor screening and cell lysates PKA activity analysis, showing great promise in kinase related research.


Subject(s)
Biosensing Techniques , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Nanocomposites/chemistry , Adenosine Triphosphate/chemistry , Catalysis , Cyclic AMP-Dependent Protein Kinases/chemistry , Gold/chemistry , Hydrogen Peroxide/chemistry , Limit of Detection , Luminescence , Luminol/chemistry , Metal Nanoparticles/chemistry , Metal-Organic Frameworks/chemistry , Platinum/chemistry
5.
J Biol Chem ; 292(30): 12460-12470, 2017 07 28.
Article in English | MEDLINE | ID: mdl-28584058

ABSTRACT

The insect-specific transcription factor Broad-Complex (BR-C) is transcriptionally activated by the steroid 20-hydroxyecdysone (20E) and regulates the expression of many target genes involved in insect growth and development. However, although the transcriptional regulation of BR-C proteins has been well studied, how BR-C is regulated at post-transcription and -translation levels is poorly understood. To this end, using liquid chromatography-tandem mass spectrometry analysis, we identified residue Ser-186 as a phosphorylation site of BR-C in silkworm. Site-directed mutagenesis and treatment with specific kinase activators and inhibitors indicated that the Ser-186 residue in silkworm BR-C is phosphorylated by protein kinase A (PKA). Immunostaining assays disclosed that PKA-mediated phosphorylation of silkworm BR-C has no effect on its nuclear import. However, luciferase reporter analysis, electrophoretic mobility shift assays, and chromatin immunoprecipitation revealed that the PKA phosphorylation event suppresses the transcriptional activation of silkworm BR-C target genes and that this inhibition was caused by repression of BR-C binding to its DNA targets. Of note, both in vitro and ex vivo experiments disclosed that a continuous 20E signal inhibits the PKA-mediated BR-C phosphorylation and also the cAMP/PKA pathway, indicating that 20E's inhibitory effect on PKA-mediated phosphorylation of silkworm BR-C contributes to maintaining BR-C transcriptional activity. In conclusion, our findings indicate that PKA-mediated phosphorylation inhibits silkworm BR-C activity by interfering with its binding to DNA and that 20E signaling relieves PKA-mediated phosphorylation of BR-C, thereby maintaining its transcriptional activity.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/metabolism , Down-Regulation , Transcription Factors/antagonists & inhibitors , Transcription Factors/metabolism , Transcription, Genetic , Animals , Bombyx , Chromatography, Liquid , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Phosphorylation , Tandem Mass Spectrometry , Transcription Factors/chemistry , Transcription Factors/genetics
6.
Protein J ; 35(4): 247-55, 2016 08.
Article in English | MEDLINE | ID: mdl-27287055

ABSTRACT

The cAMP-dependent protein kinase (PKA) is the best understood member of the superfamily of serine-threonine protein kinases and is involved in controlling a variety of cellular processes. Measurements of PKA activity traditionally relied on the use of [(32)P]-labeled ATP as the phosphate donor and a protein or peptide substrate as the phosphoaceptor. Recently non-isotopic assays for the PKA have been developed and this paper presents an improvement of a fluorometric assay for measuring the activity of PKA. Three peptides were synthesized with the following sequences: LRRASLG (Kemptide), LRRASLGK (Kemptide-Lys8) and LRRASLGGGLRRASLG (Bis-Kemptide), these have in common the substrate sequence recognized by the PKA (RRXS/TΨ), where X is any amino acid and Ψ is a hydrophobic amino acid. Optimal conditions were established for the non-radioactive assay to detect the PKA activity by phosphorylation of these three peptides that are covalently linked to fluorescamine at their N-terminus. The phosphorylated and non-phosphorylated peptides were easily separated by electrophoresis, identified and quantified with optical densitometry and ultraviolet light. The fluorescamine-labeled Kemptide-Lys8 substrate (Fluram-Kemptide-Lys8) was used to calculate the Km and Vmax of the catalytic subunit of PKA from pig heart and showed a detection limit of 260 pmol, a linear range between 700 and 1150 pmol with a linear regression R (2) = 0.956.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/chemistry , Enzyme Assays/methods , Fluorescamine/chemistry , Oligopeptides/chemistry , Amino Acid Sequence , Animals , Catalytic Domain , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Kinetics , Myocardium/chemistry , Oligopeptides/chemical synthesis , Phosphorylation , Substrate Specificity , Swine
7.
Biosens Bioelectron ; 63: 26-32, 2015 Jan 15.
Article in English | MEDLINE | ID: mdl-25048450

ABSTRACT

A simple, highly sensitive and selective electrochemical assay is developed for the detection of protein kinase A (PKA) activity based on the specific recognition utility of Phos-tag for kinase-induced phosphopeptides and enzymatic signal amplification. When the substrate peptide was phosphorylated by PKA reaction, they could specifically bind with Phos-tag-biotin in the presence of Zn(2+) through the formation of a specific noncovalent complex with the phosphomonoester dianion in phosphorylated peptides. Through the further specific interaction between biotin and avidin, avidin functionalized horseradish peroxidase (HRP) can be captured on the electrode surface. Under the catalytic effect of HRP, a sensitive electrochemical signal for benzoquinone was obtained, which was related to PKA activity. Under the optimal experiment conditions, the proposed electrochemical method presented dynamic range from 0.5 to 25 unit/mL with low detection limit of 0.15 unit/mL. This new detection strategy was also successfully applied to analyze the inhibition effect of inhibitors (ellagic acid and H-89) on PKA activity and monitored the PKA activity in cell lysates. Therefore, this Phos-tag-based electrochemical assay offers an alternative platform for PKA activity assay and inhibitor screening, and thus it might be a valuable tool for development of targeted therapy and clinical diagnosis.


Subject(s)
Biosensing Techniques , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Protein Kinase Inhibitors/pharmacology , Benzoquinones/chemistry , Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Cyclic AMP-Dependent Protein Kinases/chemistry , Ellagic Acid/pharmacology , Humans , Isoquinolines/pharmacology , Limit of Detection , Peptides/chemistry , Phosphorylation , Substrate Specificity , Sulfonamides/pharmacology
8.
J Biol Chem ; 287(32): 26596-605, 2012 Aug 03.
Article in English | MEDLINE | ID: mdl-22707725

ABSTRACT

The sarcoplasmic reticulum calcium pump (SERCA) and its regulator, phospholamban, are essential components of cardiac contractility. Phospholamban modulates contractility by inhibiting SERCA, and this process is dynamically regulated by ß-adrenergic stimulation and phosphorylation of phospholamban. Herein we reveal mechanistic insight into how four hereditary mutants of phospholamban, Arg(9) to Cys, Arg(9) to Leu, Arg(9) to His, and Arg(14) deletion, alter regulation of SERCA. Deletion of Arg(14) disrupts the protein kinase A recognition motif, which abrogates phospholamban phosphorylation and results in constitutive SERCA inhibition. Mutation of Arg(9) causes more complex changes in function, where hydrophobic substitutions such as cysteine and leucine eliminate both SERCA inhibition and phospholamban phosphorylation, whereas an aromatic substitution such as histidine selectively disrupts phosphorylation. We demonstrate that the role of Arg(9) in phospholamban function is multifaceted: it is important for inhibition of SERCA, it increases the efficiency of phosphorylation, and it is critical for protein kinase A recognition in the context of the phospholamban pentamer. Given the synergistic consequences on contractility, it is not surprising that the mutants cause lethal, hereditary dilated cardiomyopathy.


Subject(s)
Calcium-Binding Proteins/metabolism , Cyclic AMP-Dependent Protein Kinases/metabolism , Mutation , Amino Acid Sequence , Animals , Calcium-Binding Proteins/genetics , Cardiomyopathy, Dilated/genetics , Cardiomyopathy, Dilated/pathology , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Heterozygote , Models, Molecular , Molecular Sequence Data , Phosphorylation , Rabbits , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism
9.
Mol Biol Cell ; 23(9): 1618-27, 2012 May.
Article in English | MEDLINE | ID: mdl-22419819

ABSTRACT

The preprotein translocase of the outer mitochondrial membrane (TOM) functions as the main entry gate for the import of nuclear-encoded proteins into mitochondria. The major subunits of the TOM complex are the three receptors Tom20, Tom22, and Tom70 and the central channel-forming protein Tom40. Cytosolic kinases have been shown to regulate the biogenesis and activity of the Tom receptors. Casein kinase 2 stimulates the biogenesis of Tom22 and Tom20, whereas protein kinase A (PKA) impairs the receptor function of Tom70. Here we report that PKA exerts an inhibitory effect on the biogenesis of the ß-barrel protein Tom40. Tom40 is synthesized as precursor on cytosolic ribosomes and subsequently imported into mitochondria. We show that PKA phosphorylates the precursor of Tom40. The phosphorylated Tom40 precursor is impaired in import into mitochondria, whereas the nonphosphorylated precursor is efficiently imported. We conclude that PKA plays a dual role in the regulation of the TOM complex. Phosphorylation by PKA not only impairs the receptor activity of Tom70, but it also inhibits the biogenesis of the channel protein Tom40.


Subject(s)
Carrier Proteins/metabolism , Cyclic AMP-Dependent Protein Kinases/metabolism , Mitochondrial Membrane Transport Proteins/metabolism , Mitochondrial Membranes/metabolism , Protein Precursors/metabolism , Protein Processing, Post-Translational , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/metabolism , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Mitochondrial Membranes/enzymology , Mitochondrial Precursor Protein Import Complex Proteins , Phosphorylation , Saccharomyces cerevisiae/enzymology
10.
Anal Biochem ; 408(2): 345-7, 2011 Jan 15.
Article in English | MEDLINE | ID: mdl-20807496

ABSTRACT

Here we report a simple and useful method to detect endogenous substrates of protein kinases. When crude tissue extracts were resolved by liquid-phase isoelectric focusing (MicroRotofor) and the separated protein fractions were phosphorylated by protein kinases such as Ca(2+)/calmodulin-dependent protein kinase I or cAMP-dependent protein kinase, various proteins in the different fractions were efficiently phosphorylated. Since a higher number of substrates could significantly be detected using the resolved fractions by MicroRotofor as compared to direct analysis of the original tissue extracts, our present method will be applicable to the screening of endogenous substrates for various protein kinases.


Subject(s)
Calcium-Calmodulin-Dependent Protein Kinase Type 1/chemistry , Cyclic AMP-Dependent Protein Kinases/chemistry , Isoelectric Focusing/methods , Animals , Brain/enzymology , Calcium-Calmodulin-Dependent Protein Kinase Type 1/isolation & purification , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Phosphorylation , Rats , Substrate Specificity , Tissue Extracts
11.
Mol Biochem Parasitol ; 160(2): 138-42, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18501980

ABSTRACT

Cyclic AMP-dependent protein kinase (protein kinase A, PKA) is a key element in many cell signaling pathways. An essential role of Plasmodium falciparum PKA (PfPKA) activity was reported in the intraerythrocytic growth of the malaria parasite. However, molecular characterization of PfPKA using purified recombinant proteins has not yet been performed. Here, we report the first successful purification of the enzymatically active PKA catalytic subunit of P. falciparum (PfPKA-C) using a wheat germ cell-free expression system. Interestingly, parasite enzymatic activity was weakly inhibited as compared with the inhibition of mammalian PKA catalytic subunit (PKA-C) by the specific PKA inhibitor, H89. Furthermore, PfPKA-C was only slightly inhibited by protein kinase inhibitor (PKI). These results suggest that substrate sites of PfPKA-C may be different from those of mammalian PKA-Cs. In addition, potential PKI corresponding to malarial PKA-C would also be different from those of mammalian cells.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Isoquinolines/pharmacology , Plasmodium falciparum/enzymology , Protein Kinase Inhibitors/pharmacology , Protozoan Proteins/antagonists & inhibitors , Protozoan Proteins/isolation & purification , Sulfonamides/pharmacology , Animals , Cattle , Recombinant Fusion Proteins/antagonists & inhibitors , Recombinant Fusion Proteins/isolation & purification
12.
J Biol Chem ; 283(18): 12373-86, 2008 May 02.
Article in English | MEDLINE | ID: mdl-18326045

ABSTRACT

Catecholamines in adipose tissue promote lipolysis via cAMP, whereas insulin stimulates lipogenesis. Here we show that H(2)O(2) generated by insulin in rat adipocytes impaired cAMP-mediated amplification cascade of lipolysis. These micromolar concentrations of H(2)O(2) added before cAMP suppressed cAMP activation of type IIbeta cyclic AMP-dependent protein kinase (PKA) holoenzyme, prevented hormone-sensitive lipase translocation from cytosol to storage droplets, and inhibited lipolysis. Similarly, H(2)O(2) impaired activation of type IIalpha PKA holoenzyme from bovine heart and from that reconstituted with regulatory IIalpha and catalytic alpha subunits. H(2)O(2) was ineffective (a) if these PKA holoenzymes were preincubated with cAMP, (b) if added to the catalytic alpha subunit, which is active independently of cAMP activation, and (c) if the catalytic alpha subunit was substituted by its C199A mutant in the reconstituted holoenzyme. H(2)O(2) inhibition of PKA activation remained after H(2)O(2) elimination by gel filtration but was reverted with dithiothreitol or with thioredoxin reductase plus thioredoxin. Electrophoresis of holoenzyme in SDS gels showed separation of catalytic and regulatory subunits after cAMP incubation but a single band after H(2)O(2) incubation. These data strongly suggest that H(2)O(2) promotes the formation of an intersubunit disulfide bond, impairing cAMP-dependent PKA activation. Phylogenetic analysis showed that Cys-97 is conserved only in type II regulatory subunits and not in type I regulatory subunits; hence, the redox regulation mechanism described is restricted to type II PKA-expressing tissues. In conclusion, phylogenetic analysis results, selective chemical behavior, and the privileged position in holoenzyme lead us to suggest that Cys-97 in regulatory IIalpha or IIbeta subunits is the residue forming the disulfide bond with Cys-199 in the PKA catalytic alpha subunit. A new molecular point for cross-talk among heterologous signal transduction pathways is demonstrated.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Hydrogen Peroxide/metabolism , Insulin/pharmacology , Signal Transduction/drug effects , Thioredoxins/pharmacology , Adipocytes/drug effects , Adipocytes/enzymology , Animals , Catalysis/drug effects , Catalytic Domain , Cattle , Cyclic AMP/pharmacology , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Cyclic AMP-Dependent Protein Kinases/metabolism , Disulfides/metabolism , Enzyme Activation/drug effects , Holoenzymes/metabolism , Hydrogen Peroxide/pharmacology , Lipolysis/drug effects , Male , Models, Biological , Myocardium/enzymology , Oxidation-Reduction/drug effects , Phylogeny , Rats , Rats, Wistar , Sterol Esterase/metabolism , Sulfhydryl Reagents/pharmacology
13.
Mol Cell Biochem ; 304(1-2): 155-65, 2007 Oct.
Article in English | MEDLINE | ID: mdl-17530190

ABSTRACT

The purification and functional characterization of protein kinase A catalytic subunit (PKAcat) from bovine lens cytosol has been described. Purification to homogeneity has been achieved by using 100 kDa cut-off membrane filtration followed by Sephacryl S-300 chromatography and finally fractionating on High Q anion exchange column. The purified protein migrates as a single band of molecular mass approximately 41 kDa on 12.5% SDS-PAGE. Proteomic data from ion trap LC-MS when analyzed through NCBI blast program reveals significant homology (52%) with bovine zeta-crystallin and also some homology with pig casein kinase I alpha chain (38%) and SLA-DR1 beta 1 domain (38%). The search does not indicate homology with any known catalytic subunit of PKA. Inspite of the significant homology with the zeta-crystallin, our protein is different from it in terms of molecular mass. pI value of the kinase (5.3) obtained from 2D analysis is also different from zeta-crystallin (8.5). The protein is found to contain 17% alpha-helix, 26.5% beta-sheet, 21.4% turn and 34.7% random coil. The active catalytic subunit of the bovine lens cAMP-dependent kinase belongs to Type I Calpha subtype. The enzyme shows maximum activity at 30 min incubation in presence of 5 mM MgCl(2 )and 50 microM ATP. The kinase shows broad substrate specificity. It prefers Ser over Thr as phosphorylating residue. Phosphorylation of crystallin proteins, major protein fraction of bovine lens and phosphorylation of chaperone protein alpha crystallin by the kinase suggests that the kinase plays some crucial role in regulation of chaperone function within lens.


Subject(s)
Catalytic Domain , Crystallins/metabolism , Cyclic AMP-Dependent Protein Kinases/chemistry , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Cyclic AMP-Dependent Protein Kinases/metabolism , Lens, Crystalline/chemistry , Animals , Cattle , Phosphorylation , Rabbits
14.
J Am Chem Soc ; 128(26): 8541-8, 2006 Jul 05.
Article in English | MEDLINE | ID: mdl-16802820

ABSTRACT

We report the activation of an enzyme complex by mechanical tension. Protein kinase A, a tetrameric enzyme that, in the cell, is allosterically controlled by cAMP, has been modified by the insertion of a "molecular spring" on the regulatory subunit. The spring is made of DNA, and its stiffness can be varied externally by hybridization to a complementary strand. This allows us to exert a controlled mechanical tension between the two points on the protein's surface where the spring is attached. We show that upon applying the tension, we can activate the enzyme with efficiency comparable to the activation by its natural regulatory molecule, cAMP.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/chemistry , Cyclic AMP/chemistry , Allosteric Regulation , Cyclic AMP-Dependent Protein Kinases/isolation & purification , DNA/chemistry , Enzyme Activation , Models, Molecular , Molecular Mimicry , Protein Conformation , Protein Structure, Tertiary , Stress, Mechanical , Structure-Activity Relationship
15.
Arch Biochem Biophys ; 450(2): 133-40, 2006 Jun 15.
Article in English | MEDLINE | ID: mdl-16579959

ABSTRACT

cAMP-dependent protein kinase (PKA) plays a crucial role in the release of the catch state of molluskan muscles, but the nature of the enzyme in such tissues is unknown. In this paper, we report the purification of the catalytic (C) subunit of PKA from the posterior adductor muscle (PAM) of the sea mussel Mytilus galloprovincialis. It is a monomeric protein with an apparent molecular mass of 40.0+/-2.0kDa and Stoke's radius 25.1+/-0.3A. The protein kinase activity of the purified enzyme was inhibited by both isoforms of the PKA regulatory (R) subunit that we had previously characterized in the mollusk, and also by the inhibitor peptide PKI(5-24). On the other hand, the main proteins of the contractile apparatus of PAM were partially purified and their ability to be phosphorylated in vitro by purified PKA C subunit was analyzed. The results showed that twitchin, a high molecular mass protein associated with thick filaments, was the better substrate for endogenous PKA. It was rapidly phosphorylated with a stoichiometry of 3.47+/-0.24mol Pmol(-1) protein. Also, catchin, paramyosin, and actin were phosphorylated, although more slowly and to a lesser extent. On the contrary, myosin heavy chain (MHC) and tropomyosin were not phosphorylated under the conditions used.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/chemistry , Muscle Proteins/chemistry , Mytilus/enzymology , Animals , Catalytic Domain , Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Muscle Proteins/antagonists & inhibitors , Muscle Proteins/isolation & purification , Muscles/enzymology , Peptide Fragments/chemistry , Phosphorylation
16.
J Pept Res ; 65(4): 445-9, 2005 Apr.
Article in English | MEDLINE | ID: mdl-15813892

ABSTRACT

Protein kinase (PK) A catalytic (PKAcat) subunit was purified to homogeneity from bovine lens using a 100-kDa cut-off membrane filtration followed by different chromatographic procedures. The molecular weight of PKAcat was found to be 41 kDa. The kinase phosphorylates histone IIIs and other synthetic modified peptides of VRKRTLRRL with different amino acid environment. The extent of phosphorylation depends not only on the presence of Ser or Thr (phosphorylating residues) but also on other surrounding amino acid residues. Although some peptides compete in phosphorylating histone, they are not very significant. The result suggests that the extent of phosphorylation depends on the amino acid residue(s) surrounding phosphorylable residue(s) on the peptide.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/chemistry , Lens, Crystalline/enzymology , Peptides/chemistry , Amino Acid Sequence , Animals , Catalytic Domain , Cattle , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Cyclic AMP-Dependent Protein Kinases/metabolism , Histones/chemistry , Peptides/chemical synthesis , Peptides/metabolism , Phosphorylation
17.
FEBS J ; 272(7): 1559-67, 2005 Apr.
Article in English | MEDLINE | ID: mdl-15794744

ABSTRACT

Cyclic AMP-dependent protein kinase (PKA) is a holoenzyme that consists of a regulatory (R) subunit dimer and two catalytic (C) subunits that are released upon stimulation by cAMP. Immunoblotting and immunoprecipitation of T-cell protein extracts, immunofluorescence of permeabilized T cells and RT/PCR of T-cell RNA using C subunit-specific primers revealed expression of two catalytically active PKA C subunits C alpha1 (40 kDa) and C beta2 (47 kDa) in these cells. Anti-RI alpha and Anti-RII alpha immunoprecipitations demonstrated that both C alpha1 and C beta2 associate with RI alpha and RII alpha to form PKAI and PKAII holoenzymes. Moreover, Anti-C beta2 immunoprecipitation revealed that C alpha1 coimmunoprecipitates with C beta2. Addition of 8-CPT-cAMP which disrupts the PKA holoenzyme, released C alpha1 but not C beta2 from the Anti-C beta2 precipitate, indicating that C beta2 and C alpha1 form part of the same holoenzyme. Our results demonstrate for the first time that various C subunits may colocate on the same PKA holoenzyme to form novel cAMP-responsive enzymes that may mediate specific effects of cAMP.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/metabolism , T-Lymphocytes/enzymology , Antibodies/immunology , Cyclic AMP-Dependent Protein Kinase RIIalpha Subunit , Cyclic AMP-Dependent Protein Kinase RIalpha Subunit , Cyclic AMP-Dependent Protein Kinases/genetics , Cyclic AMP-Dependent Protein Kinases/immunology , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Enzyme Activation , Holoenzymes/immunology , Holoenzymes/isolation & purification , Holoenzymes/metabolism , Humans , T-Lymphocytes/immunology
18.
FEBS Lett ; 576(1-2): 216-20, 2004 Oct 08.
Article in English | MEDLINE | ID: mdl-15474040

ABSTRACT

The high cGMP sensitivity of cAMP-dependent protein kinase A (type II) (PKAII) from invertebrates led to the hypothesis that cGMP directly activates PKAII under physiological conditions. We tested this idea using PKAII holoenzyme purified from the honeybee brain in an assay with short stimulation times. In the presence of very low cAMP concentrations, we found a synergistic increase in PKAII activation by physiological cGMP concentrations. Cloning honeybee regulatory subunit RII and phylogenetic comparison of the two cyclic nucleotide-binding sites of RII reveal a high relation of domain A of insect RII with cGMP-binding domains of cGMP-dependent protein kinases.


Subject(s)
Bees/metabolism , Cyclic AMP-Dependent Protein Kinases/metabolism , Cyclic AMP/metabolism , Cyclic GMP/metabolism , Animals , Binding Sites , Computational Biology , Cyclic AMP-Dependent Protein Kinase Type II , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Enzyme Activation , Phylogeny
19.
Methods Mol Med ; 102: 73-85, 2004.
Article in English | MEDLINE | ID: mdl-15286381

ABSTRACT

Abnormal T-cell effector functions in systemic lupus erythematosus (SLE) are present and may be associated with disease immunopathogenesis. Our work has led to the characterization of a signaling defect, involving protein kinase A (PKA), leading to abnormal T-cell effector functions in SLE. PKA is a component of the adenylyl cyclase/cyclic adenosine monophosphate/PKA (AC/cAMP/PKA) pathway, a principal signal transduction system in T cells. The aim of this chapter is to provide a comprehensive, technical, step-by-step approach to studying PKA function in T cells. The methods detailed here are (a) chromatographic fractionation of PKA-I and PKA-II isozymes and PKA phosphotransferase activity in purified T cell populations, (b) Western immunoblotting to identify the presence of regulatory (R)-subunit proteins of PKA, and (c) isolation of RNA, and quantification of PKA R subunit-specific transcripts by competitive polymerase chain reaction. Although our emphasis in the chapter is T cells, these methods may be useful for investigation of signaling via PKA in other cell types as well.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/metabolism , Lupus Erythematosus, Systemic/enzymology , Lupus Erythematosus, Systemic/immunology , Signal Transduction/immunology , T-Lymphocytes/enzymology , T-Lymphocytes/immunology , Blotting, Western , Chromatography, Liquid , Cloning, Molecular , Cyclic AMP-Dependent Protein Kinases/genetics , Cyclic AMP-Dependent Protein Kinases/isolation & purification , DNA, Complementary/genetics , Humans , Immunologic Techniques , In Vitro Techniques , Isoenzymes/genetics , Isoenzymes/isolation & purification , Isoenzymes/metabolism , Lupus Erythematosus, Systemic/genetics , Polymerase Chain Reaction
20.
Protein Expr Purif ; 35(1): 156-69, 2004 May.
Article in English | MEDLINE | ID: mdl-15039079

ABSTRACT

The Cgamma and Calpha subunits of the cAMP-dependent protein kinase (PKA) contain 350 amino acids that are highly homologous (83% amino acid sequence), with 91% homology within the catalytic domain (a.a. 40-300). Unlike Cgamma, the Calpha subunit has been readily purified and characterized as a recombinant protein in vitro, in intact cells, and in vivo. This report describes for the first time the expression, purification, and characterization of Cgamma. The expression of active Cgamma was eukaryote-specific, from mammalian and insect cells, but not bacteria. Active recombinant Cgamma was optimally expressed and purified to homogeneity from Sf9 cells with a 273-fold increase in specific activity and a 21% recovery after sequential CM-Sepharose and Sephacryl S-300 chromatography. The specific activity of pure Cgamma was 0.31 and 0.81 U/mg with kemptide and histone as substrates, respectively. Physical characterization showed Cgamma had a lower apparent molecular weight and Stokes radii than Calpha, suggesting differences in tertiary structures. Steady-state kinetics demonstrated that like Calpha and Cbeta, Cgamma phosphorylates substrates requiring basic amino acids at P-3 and P-2. However, Cgamma generally exhibited a lower Km and Vmax than Calpha for peptide substrates tested. Cgamma also exhibited a distinct pseudosubstrate specificity showing inhibition by homogeneous preparations of RIalpha and RIIalpha-subunits, but not by pure recombinant protein kinase inhibitors PKIalpha and PKIbeta, PKA-specific inhibitors. These studies suggest that Cgamma and Calpha exhibit differences in structure and function in vitro, supporting the hypothesis that functionally different C-subunit isozymes could diversify and/or fine-tune cAMP signal transduction downstream of PKA activation.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/metabolism , Isoenzymes/metabolism , Protein Subunits/metabolism , Amino Acid Sequence , Animals , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Bacterial Proteins/metabolism , Catalytic Domain , Cell Line , Cyclic AMP-Dependent Protein Kinase Catalytic Subunits , Cyclic AMP-Dependent Protein Kinases/genetics , Cyclic AMP-Dependent Protein Kinases/isolation & purification , Enzyme Inhibitors/metabolism , Genetic Vectors , Humans , Insecta , Isoenzymes/genetics , Isoenzymes/isolation & purification , Mice , Molecular Sequence Data , Peptides/genetics , Peptides/metabolism , Protein Subunits/genetics , Protein Subunits/isolation & purification , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Substrate Specificity
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