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2.
Biomed Res Int ; 2020: 5208279, 2020.
Article in English | MEDLINE | ID: mdl-33062681

ABSTRACT

BACKGROUND: The present study was designed to verify the accuracy of the noninvasive biomarkers enolase/Cr, CA125, and CA19-9 as a clinical diagnostic tool for the detection of endometriosis. METHODS: A cross-sectional study was performed at Rasool-e-Akram Hospital affiliated to Iran University of Medical Sciences, Tehran, Iran, from April 2015 to April 2018. Eighty-six women were scheduled to undergo laparoscopy due to chronic pelvic pain, infertility, pelvic mass, and abnormal uterine bleeding. Serum and urine samples of all patients were collected preoperatively. Serum levels of CA125 and CA19-9, and urine levels of enolase-1 were measured. Serum levels of CA125 and CA19-9 were determined by the electrochemiluminescence method (ECL). Urinary enolase-1 was measured by the ELISA method. RESULT: Serum levels of CA125 and CA19-9 were significantly higher in the endometriosis group than in controls (p < 0.001, p = 0.004, respectively). Levels of enolase I and enolase/Cr were higher in patients with endometriosis, but the differences were not statistically significant. The sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) of combined enolase/Cr, CA125, and CA19-9 were 65%, 66.6%, 71%, and 60.1%, respectively. The positive likelihood ratio (PLR) and negative likelihood ratio (NLR) of combined enolase/Cr, CA125, and CA19-9 was 1.94 and 0.52, respectively. The area under the ROC curve for enolase/Cr + CA125 + CA19 - 9 was 0.675 (95% confidence interval 0.573-0.710). CONCLUSION: The present study revealed that concurrent measurement of enolase-1, CA125, and CA19-9 might be a valuable noninvasive test for the identification of endometriosis.


Subject(s)
Biomarkers, Tumor/urine , CA-125 Antigen/blood , CA-19-9 Antigen/blood , DNA-Binding Proteins/urine , Endometriosis/diagnosis , Membrane Proteins/blood , Phosphopyruvate Hydratase/urine , Tumor Suppressor Proteins/urine , Adolescent , Adult , Biomarkers , Cross-Sectional Studies , Female , Humans , Iran , Likelihood Functions , Predictive Value of Tests , Young Adult
3.
PLoS One ; 15(4): e0232105, 2020.
Article in English | MEDLINE | ID: mdl-32320451

ABSTRACT

Cervical cancer is a significant public health problem, especially in low- and middle-income countries, where women have little access to cervical cancer screening; consequently 80% of cervical cancer related mortality occurs in these regions. The development of screening methods that need less infrastructure thus represents an urgent medical need. The study aims to compare the detection rates of high-risk human papillomavirus 16 and 18 E6 oncoprotein in urine, vaginal self-collected, and cervical scrapes of women using the OncoE6™ Cervical Test and compare the HPV16 and/or HPV18 E6 detection rates with the HPV DNA testing. Paired urine, vaginal self-collected and cervical specimens were collected from 124 women who participated in cervical cancer screening or treatment in this proof-of-concept study and underwent to HPV16/18-E6 testing and high-risk HPV DNA testing prior to treatment of cervical neoplasia or cancer. Concordance between urinary, vaginal and cervical HPV16/18-E6 and HPV-DNA testing was evaluated for patients classified as negative group (

Subject(s)
DNA-Binding Proteins/urine , Immunoassay/methods , Oncogene Proteins, Viral/urine , Repressor Proteins/urine , Adult , DNA-Binding Proteins/genetics , Female , Human Papillomavirus DNA Tests , Human papillomavirus 16/genetics , Humans , Middle Aged , Oncogene Proteins, Viral/genetics , Papillomavirus Infections/virology , Repressor Proteins/genetics , Uterine Cervical Neoplasms/virology , Vagina/virology
4.
Clin Nephrol ; 93(1): 129-133, 2020.
Article in English | MEDLINE | ID: mdl-32145759

ABSTRACT

BACKGROUND: Diabetic nephropathy (DN) is a major complication of diabetes mellitus (DM), and the most frequent cause of end-stage renal disease (ESRD) in many countries. Urinary extracellular vesicles (UEVs) are considered a rich non-invasive source of markers for renal diseases. In this study, UEV enrichment and analysis in diabetic nephropathy (DN) was performed in a community epidemiological survey supported through the ISN CKHDP program. MATERIALS AND METHODS: Patients were divided into five groups according to severity of kidney damage. A hydrostatic dialysis method was used for UEV enrichment followed by quantitation using Coomassie protein assays and subsequent adjustment using urinary creatinine levels. UEVs were then characterized by transmission electron microscopy (TEM), nanoparticle tracking analysis (NTA), and Western blotting of tumor susceptibility gene product TSG101. Two-dimensional DIGE (2D-DIGE) was used to analyze differential protein expression in the UEVs. Mass spectrometry (MS) was conducted and MASCOT search engine was used to identify potential biomarkers. RESULTS: Bradford protein assay showed that protein concentration of UEVs in diabetics with kidney injury increased significantly as compared to normal controls. UEVs present a round, cup-shaped, membrane-encapsulated structure under TEM, and the main peak of UEVs show 55 - 110 nm nanoparticles with NTA. MS and MASCOT identified 22 differential proteins, and MASP2, CALB1, S100A8, and S100A9 were selected as potential biomarkers of early DN based on bioinformatic analysis. DISCUSSION: Our results show UEV proteome changes in different stages of DN. The results of this study show four unique proteins that undergo changes in early DN. These promising discoveries may prompt a new field of research focused on improving the diagnosis of DN.


Subject(s)
Diabetic Nephropathies/diagnosis , Extracellular Vesicles/chemistry , Prediabetic State/diagnosis , Biomarkers/urine , Calgranulin A/analysis , DNA-Binding Proteins/urine , Diabetic Nephropathies/urine , Endosomal Sorting Complexes Required for Transport/urine , Humans , Mannose-Binding Protein-Associated Serine Proteases/urine , Prediabetic State/urine , Proteomics , Transcription Factors/urine
5.
Cancer Cytopathol ; 127(9): 578-585, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31386310

ABSTRACT

BACKGROUND: Mutations of AT-rich interactive domain 1 (ARID1A) have been associated with a worse outcome after intravesical treatment with bacille Calmette-Guérin in patients with non-muscle-invasive bladder cancer (NMIBC). Loss of ARID1A protein expression in urine cytology may serve as an indication of an ARID1A mutation. Therefore, the authors examined the expression of ARID1A in urine cytology and histological specimens of bladder cancer for correlation with ARID1A mutational status. METHODS: The authors constructed a tissue microarray containing samples from 164 tissue samples from 150 patients with NMIBC and 100 tissue samples from 81 patients with muscle-invasive bladder cancer. A second cohort consisted of archived cytological specimens and matched tissue sections from 62 patients with high-grade NMIBC. The authors established immunohistochemistry and immunocytochemistry (ICC) protocols, respectively, for the analysis of ARID1A protein expression in histological and cytological specimens. Confirmatory next-generation sequencing (NGS) was performed on tumor specimens using a targeted NGS panel containing all exonic regions of ARID1A. RESULTS: The prevalence of ARID1A loss of expression on the tissue microarray was 3.6% in NMIBC (6 of 164 tissue samples) and 10% in muscle-invasive bladder cancer (10 of 100 tissue samples) (P = .059). Loss of ARID1A expression in cytology was concordantly immunohistochemistry negative in 6 of 8 matched tissue specimens. NGS confirmed an ARID1A mutation on all 6 histology samples with loss of ARID1A expression. When NGS demonstrated an absence of ARID1A mutation, histology was concordantly positive (16 of 16 cases). CONCLUSIONS: The authors have suggest ARID1A ICC as a promising surrogate marker for ARID1A mutational status in patients with urothelial carcinoma. Pitfalls in ICC scoring include benign umbrella cells that often are negative for ARID1A. Further prospective studies are needed to determine the clinical relevance of ARID1A ICC in urinary cytology.


Subject(s)
Biomarkers, Tumor/urine , Carcinoma, Transitional Cell/diagnosis , DNA-Binding Proteins/urine , Transcription Factors/urine , Urinary Bladder Neoplasms/diagnosis , Aged , Aged, 80 and over , Biomarkers, Tumor/genetics , Biomarkers, Tumor/metabolism , Carcinoma, Transitional Cell/genetics , Carcinoma, Transitional Cell/pathology , Carcinoma, Transitional Cell/urine , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Female , High-Throughput Nucleotide Sequencing , Humans , Immunohistochemistry , Male , Middle Aged , Mutation , Tissue Array Analysis , Transcription Factors/genetics , Transcription Factors/metabolism , Urinary Bladder/pathology , Urinary Bladder Neoplasms/genetics , Urinary Bladder Neoplasms/pathology , Urinary Bladder Neoplasms/urine
6.
PLoS One ; 14(5): e0216788, 2019.
Article in English | MEDLINE | ID: mdl-31150422

ABSTRACT

Diabetic nephropathy (DN) is among the most serious complications of diabetes mellitus, and often leads to end-stage renal disease ultimately requiring dialysis or renal transplantation. The loss of podocytes has been reported to have a role in the onset and progression of DN. Here, we addressed the activation mechanism of Smad3 signaling in podocytes. Expression of RII and activation of Smad3 were induced by AGE exposure (P<0.05). Reduction of the activation of RII-Smad3 signaling ameliorated podocyte injuries in Smad3-knockout diabetic mice. The bone morphogenetic protein 4 (BMP4) significantly regulated activation of RII-Smad3 signalings (P<0.05). Moreover, the epithelium-specific transcription factor, Elf3was induced by AGE stimulation and, subsequently, upregulated RII expression in cultured podocytes. Induction of Elf3 and activation of RII-Smad3 signaling, leading to a decrease in WT1 expression, were observed in podocytes in diabetic human kidneys. Moreover, AGE treatment induced the secretion of Elf3-containing exosomes from cultured podocytes, which was dependent on the activation of the TGF-ß-Smad3 signaling pathway. In addition, exosomal Elf3 protein in urine could be measured only in urinary exosomes from patients with DN. The appearance of urinary exosomal Elf3 protein in patients with DN suggested the existence of irreversible injuries in podocytes. The rate of decline in the estimated Glomerular Filtration Rate (eGFR) after measurement of urinary exosomal Elf3 protein levels in patients with DN (R2 = 0.7259) might be useful as an early non-invasive marker for podocyte injuries in DN.


Subject(s)
DNA-Binding Proteins/urine , Diabetic Nephropathies/urine , Exosomes/metabolism , Podocytes/metabolism , Signal Transduction , Smad3 Protein/urine , Transcription Factors/urine , Animals , Biomarkers/urine , Diabetic Nephropathies/pathology , Exosomes/pathology , Glomerular Filtration Rate , Male , Mice , Podocytes/pathology
7.
Am J Physiol Renal Physiol ; 314(4): F584-F601, 2018 04 01.
Article in English | MEDLINE | ID: mdl-29357442

ABSTRACT

Acute kidney injury (AKI) is an important risk factor for the development of chronic kidney disease (CKD), and an alteration in renal water handling has been observed during the transition of AKI to CKD. Urinary exosomal release of aquaporin-1 (AQP1) and AQP2, important proteins for renal water handling, has recently been reported to predict their levels of renal expression. Therefore, we examined the patterns of urinary exosomal release of AQP1 and AQP2, and the exosomal marker proteins tumor susceptibility 101 protein (TSG101) and ALG-2 interacting protein X (Alix), in the acute and chronic phases following induction of AKI by renal bilateral ischemia/reperfusion (I/R) in rats. Blood tests and histological examinations indicated that AKI occurred before at 7 days after renal I/R ( day 7) and that renal fibrosis developed progressively thereafter. Immunoblotting demonstrated significant decreases in the urinary exosomal release of AQP1 and AQP2 during severe AKI. Urinary exosomal release of Alix and TSG101 was significantly increased on day 7. These data were also confirmed in rats with unilateral renal I/R causing more serious AKI. Urinary exosomal release of either the Ser-256- or Ser-269-phosphorylated form of AQP2, both of which are involved in apical trafficking of AQP2, was positively correlated with that of total AQP2. These results suggest that urinary exosomal release of AQP1 and AQP2 is reduced in I/R-induced AKI, whereas that of Alix and TSG101 is increased in the initial phase of renal fibrosis. Furthermore, apical trafficking of AQP2 appears to be related to urinary exosomal release of AQP2.


Subject(s)
Acute Kidney Injury/urine , Aquaporin 1/urine , Aquaporin 2/urine , Exosomes/metabolism , Kidney/metabolism , Renal Elimination , Reperfusion Injury/urine , Acute Kidney Injury/pathology , Animals , Calcium-Binding Proteins/urine , DNA-Binding Proteins/urine , Disease Models, Animal , Endosomal Sorting Complexes Required for Transport/urine , Fibrosis , Kidney/pathology , Male , Phosphorylation , Protein Transport , Rats, Sprague-Dawley , Reperfusion Injury/pathology , Time Factors , Transcription Factors/urine
8.
Acta Neuropathol Commun ; 5(1): 86, 2017 Nov 22.
Article in English | MEDLINE | ID: mdl-29166931

ABSTRACT

Missense mutations in the leucine-rich repeat kinase 2 (LRRK2) gene can cause late-onset Parkinson disease (PD). LRRK2 mutations increase LRRK2 kinase activities that may increase levels of LRRK2 autophosphorylation at serine 1292 (pS1292) and neurotoxicity in model systems. pS1292-LRRK2 protein can be packaged into exosomes and measured in biobanked urine. Herein we provide evidence that pS1292-LRRK2 protein is robustly expressed in cerebral spinal fluid (CSF) exosomes. In a novel cohort of Norwegian subjects with and without the G2019S-LRRK2 mutation, with and without PD, we quantified levels of pS1292-LRRK2, total LRRK2, and other exosome proteins in urine from 132 subjects and in CSF from 82 subjects. CSF and urine were collected from the same morning clinic visit in 55 of the participants. We found that total LRRK2 protein concentration was similar in exosomes purified from either CSF or urine but the levels did not correlate. pS1292-LRRK2 levels were higher in urinary exosomes from male and female subjects with a LRRK2 mutation. Male LRRK2 mutation carriers without PD had intermediate pS1292-LRRK2 levels compared to male carriers with PD and controls. However, female LRRK2 mutation carriers without PD had the same pS1292-LRRK2 levels compared to female carriers with PD. pS1292-LRRK2 levels in CSF exosomes were near saturated in most subjects, ten-fold higher on average than pS1292-LRRK2 levels in urinary exosomes, irrespective of LRRK2 mutation status or PD diagnosis. These results provide insights into the effects of LRRK2 mutations in both the periphery and brain in a well-characterized clinical population and show that LRRK2 protein in brain exosomes may be much more active than in the periphery in most subjects.


Subject(s)
Brain/metabolism , Gene Expression Regulation/genetics , Leucine-Rich Repeat Serine-Threonine Protein Kinase-2/genetics , Leucine-Rich Repeat Serine-Threonine Protein Kinase-2/metabolism , Mutation/genetics , Parkinson Disease/genetics , Aged , Case-Control Studies , Cohort Studies , DNA-Binding Proteins/cerebrospinal fluid , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , DNA-Binding Proteins/urine , Endosomal Sorting Complexes Required for Transport/cerebrospinal fluid , Endosomal Sorting Complexes Required for Transport/genetics , Endosomal Sorting Complexes Required for Transport/metabolism , Endosomal Sorting Complexes Required for Transport/urine , Female , Genetic Predisposition to Disease , HEK293 Cells , Humans , Male , Membrane Proteins/cerebrospinal fluid , Membrane Proteins/urine , Middle Aged , Norway , Parkinson Disease/cerebrospinal fluid , Parkinson Disease/pathology , Parkinson Disease/urine , Phosphorylation/genetics , Serine/genetics , Serine/metabolism , Severity of Illness Index , Transcription Factors/cerebrospinal fluid , Transcription Factors/genetics , Transcription Factors/metabolism , Transcription Factors/urine
9.
Int Urol Nephrol ; 49(1): 165-169, 2017 Jan.
Article in English | MEDLINE | ID: mdl-27677479

ABSTRACT

PURPOSE: Urinary exosome is an ideal noninvasive, low-cost source of kidney diseases biomarkers. However, many factors effect the isolation of urine-derived exosome. The effect of pH on the yield of exosome isolation under different pH was explored. METHODS: The pH was adjusted for 4, 5, 6, 7 and 8 with hydrochloric acid and sodium hydroxide solution. All samples were incubated for 30 min before differential ultracentrifugation. Exosome-associated protein markers TSG101, ALIX and total concentration of RNA were evaluated by Western-blotting and micro-amount ultraviolet spectrophotometer, respectively. RESULTS: A major loss of urinary exosome was received at pH 8 compared with alkali medium or control group. There was no difference whether or not added EDTA-Na2. CONCLUSIONS: Acidic environment was likely to conducive to the isolation of exosome and maintain its stability and integrity that suggest pH medium needs to be carefully considered and also provide a methodology for future separation exosome.


Subject(s)
Calcium-Binding Proteins/urine , Cell Cycle Proteins/urine , DNA-Binding Proteins/urine , Endosomal Sorting Complexes Required for Transport/urine , Exosomes , Kidney Diseases/urine , RNA/isolation & purification , Transcription Factors/urine , Adult , Biomarkers/urine , Female , Humans , Hydrogen-Ion Concentration , Male , RNA/urine , Ultracentrifugation , Young Adult
10.
Investig Clin Urol ; 57(2): 106-12, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26981592

ABSTRACT

PURPOSE: Topoisomerase-II alpha (TopoIIA ), a DNA gyrase isoform that plays an important role in the cell cycle, is present in normal tissues and various human cancers, and can show altered expression in both. The aim of the current study was to examine the value of urinary TopoIIA cell-free DNA as a noninvasive diagnosis of bladder cancer (BC). MATERIALS AND METHODS: Two patient cohorts were examined. Cohort 1 (73 BC patients and seven controls) provided bladder tissue samples, whereas cohort 2 (83 BC patients, 54 nonmalignant hematuric patients, and 61 normal controls) provided urine samples. Real-time quantitative polymerase chain reaction was used to measure expression of TopoIIA mRNA in tissues and TopoIIA cell-free DNA in urine samples. RESULTS: The results showed that expression of TopoIIA mRNA in BC tissues was significantly higher than that in noncancer control tissues (p<0.001). The expression of urinary TopoIIA cell-free DNA in BC patients was also significantly higher than that in noncancer patient controls and hematuria patients (p < 0.001 and p < 0.001, respectively). High expression of urinary TopoIIA cell-free DNA was also detected in muscle invasive bladder cancer (MIBC) when compared with nonmuscle invasive bladder cancer (NMIBC) (p=0.002). Receiver operating characteristics (ROC) curve analysis was performed to examine the sensitivity/specificity of urinary TopoIIA cell-free DNA for diagnosing BC, NMIBC, and MIBC. The areas under the ROC curve for BC, NMIBC, and MIBC were 0.741, 0.701, and 0.838, respectively. CONCLUSIONS: In summary, the results of this study provide evidence that cell-free TopoIIA DNA may be a potential biomarker for BC.


Subject(s)
Antigens, Neoplasm/urine , Biomarkers, Tumor/urine , DNA Topoisomerases, Type II/urine , DNA-Binding Proteins/urine , Urinary Bladder Neoplasms/diagnosis , Adult , Aged , Antigens, Neoplasm/genetics , Biomarkers, Tumor/genetics , Case-Control Studies , Cell-Free System , Cohort Studies , DNA Topoisomerases, Type II/genetics , DNA, Neoplasm/genetics , DNA-Binding Proteins/genetics , Female , Gene Expression , Hematuria/urine , Humans , Male , Middle Aged , Neoplasm Grading , Neoplasm Staging , RNA, Messenger/genetics , RNA, Neoplasm/genetics , Sensitivity and Specificity , Urinary Bladder Neoplasms/complications , Urinary Bladder Neoplasms/pathology
11.
J Proteomics ; 96: 92-102, 2014 Jan 16.
Article in English | MEDLINE | ID: mdl-24211404

ABSTRACT

Diabetic nephropathy (DN) is a major complication of diabetes mellitus (DM), the most frequent cause of end-stage renal disease (ESRD). Exosomes isolated from urine are considered a rich non-invasive source of markers for renal events. Proteinuria associated with DN patients at advanced stages may result in "contamination" of exosomal fraction by co-precipitation of high abundance urine proteins, making it enormously difficult to obtain a reliable comparison of healthy individuals and DN patients and to detect minor proteins. We evaluated different protocols for urinary exosome isolation (ultracentrifugation-based and Exoquick® reagent-based) in combination with an easy and quick depletion procedure of contaminating high abundance proteins (albumin). The optimal methodology was then applied to investigate the proteome of human urinary exosomes in DN and controls using spectral counting LC-MS/MS analysis followed by selected reaction monitoring (SRM) confirmation. A panel of 3 proteins (AMBP, MLL3, and VDAC1) is differentially present in urinary exosomes from DN patients, opening a new field of research focused on improving diagnosis and follow-up of this pathology. BIOLOGICAL SIGNIFICANCE: Diabetic nephropathy (DN) is a progressive proteinuric kidney disease, a major complication of diabetes mellitus, and the most frequent cause of end-stage renal disease. Current markers of disease (i.e. creatinine and urinary albumin excretion) have proven limitations (i.e. some patients regress to normoalbuminuria, kidney damage may be already present in recently diagnoses microalbuminuric patients and renal function may decrease in the absence of significant albuminuria). We show here the first study on human DN proteome of urinary exosomes. Proteinuria associated to DN patients resulting in contamination of exosomal fraction and the associated difficulty to reliably compare healthy and disease conditions, are here overcome. A combined methodology pointed to increase exosomal proteome recovery and depletion of high-abundance proteome was here set-up. A total of 352 proteins were here identified for the first time associated to human urinary exosomes. Label-free quantitative comparison of DN urinary exosomes vs control group and SRM further validation, resulted in the discovery of a panel of three proteins (AMBP, MLL3 and VDAC1) which changes in DN, opening a new field of research focused to improve diagnosis and follow-up of this pathology.


Subject(s)
Alpha-Globulins/urine , DNA-Binding Proteins/urine , Diabetic Nephropathies/urine , Proteome/metabolism , Voltage-Dependent Anion Channel 1/urine , Adult , Aged , Albuminuria/urine , Exosomes/metabolism , Female , Humans , Male , Middle Aged
12.
Biomarkers ; 19(1): 16-21, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24283984

ABSTRACT

OBJECTIVE: The aim of this study is to validate and investigate the clinical value of urinary enolase I in patients with endometriosis. METHODS: Urine samples of 39 patients with histologically confirmed endometriosis and 20 patients without endometriosis were collected. Western blot analysis and enzyme-linked immunosorbent assay were used to detect the increase of enolase I in patients' urine. RESULTS: Urinary enolase I expression corrected for creatinine ratio (non neuronal enolase (NNE)-Cr) was significantly greater in patients with endometriosis (p = 0.026). When the diagnostic performance of NNE-Cr was evaluated with serum CA-125 combination, the area under the curve was 0.821 (95% confidence interval 0.713-0.928) with sensitivity and specificity of 76.9% and 85.0%, respectively. CONCLUSION: Elevated urinary enolase I, in conjunction with serum CA-125, may be used as a potential biomarker for endometriosis.


Subject(s)
Biomarkers, Tumor/urine , DNA-Binding Proteins/urine , Endometriosis/urine , Phosphopyruvate Hydratase/urine , Tumor Suppressor Proteins/urine , Adult , Biomarkers/urine , CA-125 Antigen/blood , Case-Control Studies , Creatinine/urine , Endometriosis/diagnosis , Endometriosis/enzymology , Female , Humans , ROC Curve
13.
Hum Reprod ; 27(2): 515-22, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22158084

ABSTRACT

BACKGROUND: Recently, proteomic technologies have demonstrated that several proteins are differently expressed in various body fluids of patients with endometriosis compared with those without this condition. The aim of this study was to investigate proteins secreted in urine of patients with endometriosis using proteomic techniques in order to identify potential markers for the clinical diagnosis of endometriosis. METHODS: Urine samples were collected from women undergoing laparoscopy for different indications including pelvic masses, pelvic pain, suspicious endometriosis, infertility and diagnostic evaluation. Proteomic techniques and mass spectrometry were used to identify proteins secreted in the urine of the patients with and without endometriosis and quantification of identified protein was performed using western blot and specific commercial sandwich enzyme-linked immunosorbent assays (ELISA). RESULTS: Twenty-two protein spots were differentially expressed in the urine of patients with and without endometriosis, one of which was identified as urinary vitamin D-binding protein (VDBP). ELISA quantification of urinary VDBP corrected for creatinine expression (VDBP-Cr) revealed that urinary VDBP-Cr was significantly greater in patients with endometriosis than in those without (111.96 ± 74.59 versus 69.90 ± 43.76 ng/mg Cr, P = 0.001). VDBP-Cr had limited value as a diagnostic marker for endometriosis (Sensitivity 58%, Specificity 76%). When combined with serum CA-125 levels (the product of serum CA-125 and urinary VDBP-Cr), it did not significantly increase the diagnostic power of serum CA-125 alone. CONCLUSIONS: Urinary VDBP levels are elevated in patients with endometriosis. They have limited value as a potential diagnostic biomarker for endometriosis but suggest it would be worthwhile to investigate other urinary proteins for this purpose.


Subject(s)
Endometriosis/urine , Up-Regulation , Vitamin D-Binding Protein/urine , Adult , Biomarkers/urine , Biomarkers, Tumor/urine , DNA-Binding Proteins/urine , Female , Humans , Middle Aged , Phosphopyruvate Hydratase/urine , Prealbumin/urine , Protein Disulfide-Isomerases/urine , Protein Subunits/urine , Sensitivity and Specificity , Tumor Suppressor Proteins/urine , Young Adult , alpha 1-Antitrypsin/urine
14.
Cancer Res ; 68(3): 645-9, 2008 Feb 01.
Article in English | MEDLINE | ID: mdl-18245462

ABSTRACT

Although prostate-specific antigen (PSA) serum level is currently the standard of care for prostate cancer screening in the United States, it lacks ideal specificity and additional biomarkers are needed to supplement or potentially replace serum PSA testing. Emerging evidence suggests that monitoring the noncoding RNA transcript PCA3 in urine may be useful in detecting prostate cancer in patients with elevated PSA levels. Here, we show that a multiplex panel of urine transcripts outperforms PCA3 transcript alone for the detection of prostate cancer. We measured the expression of seven putative prostate cancer biomarkers, including PCA3, in sedimented urine using quantitative PCR on a cohort of 234 patients presenting for biopsy or radical prostatectomy. By univariate analysis, we found that increased GOLPH2, SPINK1, and PCA3 transcript expression and TMPRSS2:ERG fusion status were significant predictors of prostate cancer. Multivariate regression analysis showed that a multiplexed model, including these biomarkers, outperformed serum PSA or PCA3 alone in detecting prostate cancer. The area under the receiver-operating characteristic curve was 0.758 for the multiplexed model versus 0.662 for PCA3 alone (P = 0.003). The sensitivity and specificity for the multiplexed model were 65.9% and 76.0%, respectively, and the positive and negative predictive values were 79.8% and 60.8%, respectively. Taken together, these results provide the framework for the development of highly optimized, multiplex urine biomarker tests for more accurate detection of prostate cancer.


Subject(s)
Biomarkers, Tumor/urine , Membrane Proteins/urine , Prostatic Neoplasms/urine , Antigens, Neoplasm/genetics , Antigens, Neoplasm/urine , Biomarkers, Tumor/genetics , Carrier Proteins/genetics , Carrier Proteins/urine , DNA, Complementary/genetics , DNA-Binding Proteins/genetics , DNA-Binding Proteins/urine , Humans , Male , Membrane Proteins/genetics , Oncogene Proteins, Fusion/genetics , Oncogene Proteins, Fusion/urine , Peptides/genetics , Peptides/urine , Polymerase Chain Reaction/methods , Prostatic Neoplasms/genetics , RNA, Neoplasm/genetics , Racemases and Epimerases/genetics , Racemases and Epimerases/urine , Trans-Activators/genetics , Trans-Activators/urine , Transcriptional Regulator ERG , Trefoil Factor-3 , Trypsin Inhibitor, Kazal Pancreatic
15.
Dev Biol ; 313(2): 584-93, 2008 Jan 15.
Article in English | MEDLINE | ID: mdl-18082680

ABSTRACT

The human kidneys filter 180 l of blood every day via about 2.5 million glomeruli. The three layers of the glomerular filtration apparatus consist of fenestrated endothelium, specialized extracellular matrix known as the glomerular basement membrane (GBM) and the podocyte foot processes with their modified adherens junctions known as the slit diaphragm (SD). In this study we explored the contribution of podocyte beta1 integrin signaling for normal glomerular function. Mice with podocyte specific deletion of integrin beta1 (podocin-Cre beta1-fl/fl mice) are born normal but cannot complete postnatal renal development. They exhibit detectable proteinuria on day 1 and die within a week. The kidneys of podocin-Cre beta1-fl/fl mice exhibit normal glomerular endothelium but show severe GBM defects with multilaminations and splitting including podocyte foot process effacement. The integrin linked kinase (ILK) is a downstream mediator of integrin beta1 activity in epithelial cells. To further explore whether integrin beta1-mediated signaling facilitates proper glomerular filtration, we generated mice deficient of ILK in the podocytes (podocin-Cre ILK-fl/fl mice). These mice develop normally but exhibit postnatal proteinuria at birth and die within 15 weeks of age due to renal failure. Collectively, our studies demonstrate that podocyte beta1 integrin and ILK signaling is critical for postnatal development and function of the glomerular filtration apparatus.


Subject(s)
Antigens, CD/metabolism , Extracellular Matrix/metabolism , Kidney Glomerulus/embryology , Kidney Glomerulus/metabolism , Membrane Glycoproteins/metabolism , Signal Transduction , Animals , Animals, Newborn , Antigens, CD/genetics , Basement Membrane/pathology , Basement Membrane/ultrastructure , Carrier Proteins/urine , Cell Cycle Proteins , Crosses, Genetic , DNA-Binding Proteins/urine , Embryo, Mammalian , Endothelium/metabolism , Endothelium/ultrastructure , Epithelial Cells/metabolism , Epithelial Cells/ultrastructure , Fluorescent Dyes/metabolism , Gene Deletion , Genes, Reporter , Glomerulosclerosis, Focal Segmental/etiology , Glomerulosclerosis, Focal Segmental/metabolism , Glomerulosclerosis, Focal Segmental/pathology , Indoles/metabolism , Integrases/genetics , Integrases/metabolism , Integrin beta3/metabolism , Intracellular Signaling Peptides and Proteins/urine , Kidney Glomerulus/ultrastructure , Luminescent Proteins/metabolism , Membrane Glycoproteins/genetics , Membrane Proteins/genetics , Membrane Proteins/metabolism , Membrane Proteins/urine , Mice , Mice, Mutant Strains , Mice, Transgenic , Nuclear Proteins/urine , Podocytes/enzymology , Podocytes/metabolism , Podocytes/ultrastructure , Protein Serine-Threonine Kinases/genetics , Protein Serine-Threonine Kinases/metabolism , Proteinuria/etiology , Proteinuria/physiopathology , RNA Splicing Factors , Renal Insufficiency/etiology , Renal Insufficiency/physiopathology , Rhodamines/metabolism , Tetraspanin 29 , Time Factors , Transgenes , beta-Galactosidase/metabolism
16.
Urology ; 70(4): 630-3, 2007 Oct.
Article in English | MEDLINE | ID: mdl-17991527

ABSTRACT

OBJECTIVES: To characterize the clonality of TMPRSS2-ERG fusion in multifocal prostate cancer. METHODS: From 80 consecutive radical prostatectomy specimens, we identified 32 cases with multiple spatially separate tumors. In each case, we assessed two to three tumor foci for TMPRSS2-ERG fusion using an ERG break-apart interphase fluorescence in situ hybridization assay. RESULTS: Individual tumor foci showed homogeneity for fusion status (intrafocal clonal homogeneity). In 19 (59%) of the 32 cases, all foci within a case had the same fusion status (interfocal homogeneity). In 15 (80%) of the 19 cases, no foci had fusion, and in 4 (20%), all foci had fusion. Of the 32 cases, 13 (41%) demonstrated heterogeneity for fusion status within a case (interfocal clonal heterogeneity). CONCLUSIONS: In this study, we have demonstrated interfocal heterogeneity and intrafocal homogeneity for TMPRSS2-ERG fusion in prostate cancer with multiple tumors. These findings support the multiclonal nature of prostate cancer with clinical implications for needle biopsy strategies and the development of urine-based screening tests.


Subject(s)
DNA-Binding Proteins/genetics , Gene Fusion , Neoplasms, Multiple Primary/genetics , Prostatic Neoplasms/genetics , Serine Endopeptidases/genetics , Trans-Activators/genetics , Biopsy, Needle , DNA-Binding Proteins/urine , Humans , In Situ Hybridization, Fluorescence , Male , Middle Aged , Neoplasms, Multiple Primary/diagnosis , Neoplasms, Multiple Primary/pathology , Prostatic Neoplasms/diagnosis , Prostatic Neoplasms/pathology , Serine Endopeptidases/urine , Trans-Activators/urine , Transcriptional Regulator ERG
17.
Kidney Int ; 70(11): 1948-54, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17035944

ABSTRACT

Our comprehensive gene expression profiles of the kidneys in an anti-glomerular basement membrane (GBM) nephritis model using DNA arrays revealed that allograft inflammatory factor-1 (AIF-1) was one of the highly expressed genes. Here, we explored the pathological significance of AIF-1 expression in the kidneys. The expression pattern of AIF-1 mRNA and protein in the kidneys of normal and diseased rats, such as anti-GBM nephritis and puromycin aminonucleoside nephrosis, was investigated by in situ hybridization, immunohistochemistry, and immunoelectron microscopy. Furthermore, the expression of AIF-1 in human kidneys and urinary sediments was examined. AIF-1 was expressed at both mRNA and protein levels in podocytes of normal and diseased rats, and in infiltrating cells in anti-GBM nephritis kidneys. The expression of AIF-1 in podocytes was constitutive; positive in podocytes of both normal and diseased rats. In humans, AIF-1 was expressed in podocytes and infiltrating inflammatory cells, similarly. Moreover, it was detected in urinary podocytes from patients with immunoglobulin A nephropathy. These data document for the first time that AIF-1, a constitutively expressed protein in rat and human podocytes, is a novel molecular component of podocytes, and that the upregulation of AIF-1 in an anti-GBM nephritis model may mainly be a consequence of its expression in infiltrating cells.


Subject(s)
Calcium-Binding Proteins/metabolism , DNA-Binding Proteins/metabolism , Glomerulonephritis/metabolism , Kidney/metabolism , Adult , Animals , Biomarkers/metabolism , DNA-Binding Proteins/urine , Female , Gene Expression , Humans , Male , Microfilament Proteins , Middle Aged , Podocytes/metabolism , Rats , Rats, Inbred WKY
18.
Int J Cancer ; 117(2): 274-80, 2005 Nov 01.
Article in English | MEDLINE | ID: mdl-15900578

ABSTRACT

The aim of our study was to prospectively evaluate the potential diagnostic value and clinical applicability of quantitative analysis of telomerase subunits gene expression in urine for noninvasive detection of bladder cancer. Expression levels of human telomerase reverse transcriptase (hTERT) and human telomerase RNA (hTR) were analyzed by real-time reverse transcriptase polymerase chain reaction (RT-PCR) in urine samples from 163 subjects with bladder cancer and 237 controls (163 individuals with benign genitourinary diseases; 74 healthy subjects). The sensitivity, specificity and optimal cutoffs were determined and compared to the corresponding values obtained by voided urine cytology. Quantitative urinary hTR analysis detects bladder cancer with an overall sensitivity of 77.0%, whereas hTERT analysis reached a sensitivity of 55.2%. The majority of undetected tumors were small, low-grade pTa lesions. Both hTR and hTERT proved to be significantly more sensitive than cytology (34.5%; p < 0.001). Specificities for hTR, hTERT and cytology were 72.1%, 85.0% and 92.7%, respectively, in the total study population and 96.9%, 89.2% and 100%, respectively, in healthy subjects. Higher diagnostic accuracy was achieved by hTR than by hTERT analysis (p < 0.05). The specificity of hTR increased to 85.0% in the total population if urinary leukocyte contamination was excluded. These data suggest that quantitative hTR analysis is the most accurate telomerase-based test for bladder cancer detection and has the potential to replace cytology as a noninvasive biomarker for disease diagnosis and follow-up.


Subject(s)
Biomarkers, Tumor/urine , DNA-Binding Proteins/urine , Telomerase/urine , Urinary Bladder Neoplasms/diagnosis , DNA-Binding Proteins/genetics , False Positive Reactions , Female Urogenital Diseases/urine , Humans , Male Urogenital Diseases , Protein Subunits/genetics , Protein Subunits/urine , RNA, Messenger/genetics , Reference Values , Reverse Transcriptase Polymerase Chain Reaction , Sensitivity and Specificity , Telomerase/genetics , Urinary Bladder Neoplasms/enzymology , Urinary Bladder Neoplasms/pathology , Urinary Bladder Neoplasms/urine
19.
J Urol ; 168(2): 465-9, 2002 Aug.
Article in English | MEDLINE | ID: mdl-12131289

ABSTRACT

PURPOSE: We evaluate the diagnostic efficacy of nuclear matrix protein-22 (NMP22, Matritech, Newton, Massachusetts), fibronectin and urinary bladder cancer antigen (UBC, IDL Biotech, Borlange, Sweden) compared with voided urine cytology in the detection of bladder cancer. MATERIALS AND METHODS: A total of 168 patients provided a single voided urine sample for NMP22, fibronectin an ideal monoclonal for urinary bladder cancer and cytology before cystoscopy. Cystoscopy was done for all patients as the reference standard for identification of bladder cancer. Biopsy of any suspicious lesion was performed for histopathological examination. Of the 168 cases 100 were histologically diagnosed as bladder cancer, whereas the remaining 68 had benign urological disorders. A group of 47 healthy volunteers were also enrolled in this study. Voided urine was evaluated by NMP22, fibronectin and UBC, and their values were expressed relative to mg. creatinine. RESULTS: The optimal threshold values for NMP22, fibronectin and UBC were calculated by receiver operator characteristics curves as 27 units per mg. creatinine, 198 mg./mg. creatinine and 13 ng./mg. creatinine, respectively. The levels and positive rates of the 3 parameters were significantly higher in the malignant group compared to either the benign group or normal controls. Of the entire group NMP22, fibronectin and UBC were positive in 93.2%, 91% and 68.2%, respectively in bladder cancer cases with positive cytology. Moreover, these positive rates were significantly higher in bilharzial bladder cancer cases (58.8%, 67.5%, 58.8%, respectively) compared to nonbilharzial cases (35.6%, 36.3%, 31.1%). Overall sensitivity and specificity were 85% and 91.3% for NMP22, 83% and 82.6% for fibronectin, 67% and 80.8% for UBC and 44% and 100% for voided urine cytology. Combined sensitivity of voided urine cytology with the 3 biomarkers together was higher than either combined sensitivity of voided urine cytology with 1 of the biomarkers or than that of the biomarker alone. CONCLUSIONS: Our data indicate that NMP22 and fibronectin had superior sensitivities compared to UBC and voided urine cytology, while NMP22 and voided urine cytology had the highest specificities. The combined use of markers increased the sensitivity of cytology from 44% to 95.3%. The higher sensitivities of markers in bilharzial than nonbilharzial bladder cancer highlight their clinical use in screening patients with urinary bilharziasis.


Subject(s)
Antigens, Neoplasm/urine , Biomarkers, Tumor/urine , Carcinoma, Squamous Cell/diagnosis , Carcinoma, Transitional Cell/diagnosis , DNA-Binding Proteins/urine , Fibronectins/urine , Transcription Factors/urine , Urinary Bladder Neoplasms/diagnosis , Adult , Aged , Biopsy , Carcinoma, Squamous Cell/pathology , Carcinoma, Squamous Cell/urine , Carcinoma, Transitional Cell/pathology , Carcinoma, Transitional Cell/urine , Cystoscopy , Diagnosis, Differential , Erythroid-Specific DNA-Binding Factors , Female , Humans , Male , Middle Aged , Predictive Value of Tests , ROC Curve , Risk Factors , Urinary Bladder/pathology , Urinary Bladder Neoplasms/pathology , Urinary Bladder Neoplasms/urine
20.
Arch Pathol Lab Med ; 125(4): 555-7, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11260637

ABSTRACT

Bence Jones proteinuria, a common clinical manifestation of multiple myeloma, can also be seen in patients with other B-cell-derived neoplasms. Measurement of pretreatment levels is a useful adjunct in the diagnosis and staging of multiple myeloma, whereas serial levels reflect response to therapy. Serum concentrations of beta2-microglobulin, a small-molecular-weight protein associated with the major histocompatibility complex class I antigens, are often elevated in hematopoietic neoplasms and are also commonly measured at baseline, before treatment, and serially throughout therapy in patients with multiple myeloma and other lymphoproliferative disorders as a marker of tumor burden. Urinary concentrations, however, are considered an indicator of renal tubular function. High urinary levels are found in tubular proteinuria, a frequent sequela of long-standing multiple myeloma. A case is described in which a high urinary concentration of beta2-microglobulin interfered with Bence Jones protein quantification by electrophoresis studies.


Subject(s)
Bence Jones Protein/urine , DNA-Binding Proteins/urine , Trans-Activators/urine , Basic Helix-Loop-Helix Transcription Factors , Diagnosis, Differential , Humans , Immunoelectrophoresis , Male , Middle Aged , Multiple Myeloma/diagnosis , Multiple Myeloma/urine
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