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1.
J Neurooncol ; 166(1): 113-127, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38191954

ABSTRACT

PURPOSE: Endosome associated trafficking regulator 1 (ENTR1) is a novel endosomal protein, which can affect multiple cellular biological behavior by remodeling plasma membrane structures. However, little is known regarding its function and underlying mechanisms in glioblastoma multiforme. METHODS: Expression profile and clinical signature were obtained from The Public Database of human tumor. Immunohistochemical staining and western blotting assays were used to measure ENTR1 expression level. Human primary GBM tumor cells and human GBM cell lines A172, U87 and U251 were used to clarify the precise role of ENTR1. CCK-8 assays, wound healing and transwell invasion assays were designed to investigate cell viability, invasion and migration of GBM cells, respectively. Underlying molecular mechanisms of ENTR1 were determined via RNA-seq analysis. Tumor formation assay was used to validate the influence of ENTR1 in vivo. RESULTS: Compared with normal brain tissues, ENTR1 was highly expressed in gliomas and correlated with malignant grades of gliomas and poor overall survival time. The proliferation and invasion of GBM cells could be weaken and the sensitivity to temozolomide (TMZ) chemotherapy increased after knocking down ENTR1. Overexpression of ENTR1 could reverse this effect. RNA-seq analysis showed that tumor necrosis factor (TNF) signaling pathway might be a putative regulatory target of ENTR1. Tumor formation assay validated that ENTR1 was a significant factor in tumor growth. CONCLUSION: Our results indicated that ENTR1 played an important role in cell proliferation, invasion and chemotherapeutic sensitivity of GBM, suggesting that ENTR1 might be a novel prognostic marker and significant therapeutic target for GBM.


Subject(s)
Brain Neoplasms , Glioblastoma , Glioma , Humans , Brain Neoplasms/pathology , Cell Line, Tumor , Cell Proliferation , Endosomes/metabolism , Endosomes/pathology , Gene Expression Regulation, Neoplastic , Glioblastoma/pathology , Signal Transduction
2.
Nature ; 623(7989): 1062-1069, 2023 Nov.
Article in English | MEDLINE | ID: mdl-37968398

ABSTRACT

Endomembrane damage represents a form of stress that is detrimental for eukaryotic cells1,2. To cope with this threat, cells possess mechanisms that repair the damage and restore cellular homeostasis3-7. Endomembrane damage also results in organelle instability and the mechanisms by which cells stabilize damaged endomembranes to enable membrane repair remains unknown. Here, by combining in vitro and in cellulo studies with computational modelling we uncover a biological function for stress granules whereby these biomolecular condensates form rapidly at endomembrane damage sites and act as a plug that stabilizes the ruptured membrane. Functionally, we demonstrate that stress granule formation and membrane stabilization enable efficient repair of damaged endolysosomes, through both ESCRT (endosomal sorting complex required for transport)-dependent and independent mechanisms. We also show that blocking stress granule formation in human macrophages creates a permissive environment for Mycobacterium tuberculosis, a human pathogen that exploits endomembrane damage to survive within the host.


Subject(s)
Endosomes , Intracellular Membranes , Lysosomes , Macrophages , Stress Granules , Humans , Endosomal Sorting Complexes Required for Transport/metabolism , Endosomes/metabolism , Endosomes/microbiology , Endosomes/pathology , Intracellular Membranes/metabolism , Intracellular Membranes/microbiology , Intracellular Membranes/pathology , Lysosomes/metabolism , Lysosomes/microbiology , Lysosomes/pathology , Mycobacterium tuberculosis/metabolism , Stress Granules/metabolism , In Vitro Techniques , Macrophages/metabolism , Macrophages/microbiology , Macrophages/pathology
3.
Transl Psychiatry ; 13(1): 54, 2023 02 14.
Article in English | MEDLINE | ID: mdl-36788216

ABSTRACT

Morphological alterations of the endosomal compartment have been widely described in post-mortem brains from Alzheimer's disease (AD) patients and subjects with Down syndrome (DS) who are at high risk for AD. Immunostaining with antibodies against endosomal markers such as Early Endosome Antigen 1 (EEA1) revealed increased size of EEA1-positive puncta. In DS, peripheral cells such as peripheral blood mononuclear cells (PBMCs) and fibroblasts, share similar phenotype even in the absence of AD. We previously found that PBMCs from AD patients have larger EEA1-positive puncta, correlating with brain amyloid load. Here we analysed the endosomal compartment of fibroblasts from a very well characterised cohort of AD patients (IMABio3) who underwent thorough clinical, imaging and biomarkers assessments. Twenty-one subjects were included (7 AD with mild cognitive impairment (AD-MCI), 7 AD with dementia (AD-D) and 7 controls) who had amyloid-PET at baseline (PiB) and neuropsychological tests at baseline and close to skin biopsy. Fibroblasts isolated from skin biopsies were immunostained with anti-EEA1 antibody and imaged using a spinning disk microscope. Endosomal compartment ultrastructure was also analysed by electron microscopy. All fibroblast lines were genotyped and their AD risk factors identified. Our results show a trend to an increased EEA1-positive puncta volume in fibroblasts from AD-D as compared to controls (p.adj = 0.12) and reveal enhanced endosome area in fibroblasts from AD-MCI and AD-AD versus controls. Larger puncta size correlated with PiB retention in different brain areas and with worse cognitive scores at the time of biopsy as well as faster decline from baseline to the time of biopsy. Finally, we identified three genetic risk factors for AD (ABCA1, COX7C and MYO15A) that were associated with larger EEA1 puncta volume. In conclusion, the endosomal compartment in fibroblasts could be used as cellular peripheral biomarker for both amyloid deposition and cognitive decline in AD patients.


Subject(s)
Alzheimer Disease , Cognitive Dysfunction , Humans , Amyloid , Amyloid beta-Peptides , Endosomes/pathology , Fibroblasts , Leukocytes, Mononuclear , Positron-Emission Tomography
4.
Handb Clin Neurol ; 193: 33-51, 2023.
Article in English | MEDLINE | ID: mdl-36803821

ABSTRACT

Parkinson's disease (PD) remains one of the most prevalent neurodegenerative disorders. It has become increasingly recognized that PD is not one disease but a constellation of many, with distinct cellular mechanisms driving pathology and neuronal loss in each given subtype. Endolysosomal trafficking and lysosomal degradation are crucial to maintain neuronal homeostasis and vesicular trafficking. It is clear that deficits in endolysosomal signaling data support the existence of an endolysosomal PD subtype. This chapter describes how cellular pathways involved in endolysosomal vesicular trafficking and lysosomal degradation in neurons and immune cells can contribute to PD. Last, as inflammatory processes including phagocytosis and cytokine release are central in glia-neuron interactions, a spotlight on the role of neuroinflammation plays in the pathogenesis of this PD subtype is also explored.


Subject(s)
Parkinson Disease , Humans , Parkinson Disease/pathology , Endosomes/metabolism , Endosomes/pathology , Lysosomes/metabolism , Lysosomes/pathology , Neurons/pathology
5.
Hum Mol Genet ; 32(7): 1162-1174, 2023 03 20.
Article in English | MEDLINE | ID: mdl-36345169

ABSTRACT

ADP-ribosylation factor 1 (ARF1) is a small GTPase that regulates membrane traffic at the Golgi apparatus and endosomes through recruitment of several coat proteins and lipid-modifying enzymes. Here, we report a pediatric patient with an ARF1-related disorder because of a monoallelic de novo missense variant (c.296 G > A; p.R99H) in the ARF1 gene, associated with developmental delay, hypotonia, intellectual disability and motor stereotypies. Neuroimaging revealed a hypoplastic corpus callosum and subcortical white matter abnormalities. Notably, this patient did not exhibit periventricular heterotopias previously observed in other patients with ARF1 variants (including p.R99H). Functional analysis of the R99H-ARF1 variant protein revealed that it was expressed at normal levels and properly localized to the Golgi apparatus; however, the expression of this variant caused swelling of the Golgi apparatus, increased the recruitment of coat proteins such as coat protein complex I, adaptor protein complex 1 and GGA3 and altered the morphology of recycling endosomes. In addition, we observed that the expression of R99H-ARF1 prevented dispersal of the Golgi apparatus by the ARF1-inhibitor brefeldin A. Finally, protein interaction analyses showed that R99H-ARF1 bound more tightly to the ARF1-effector GGA3 relative to wild-type ARF1. These properties were similar to those of the well-characterized constitutively active Q71L-ARF1 mutant, indicating that the pathogenetic mechanism of the R99H-ARF1 variant involves constitutive activation with resultant Golgi and endosomal alterations. The absence of periventricular nodular heterotopias in this R99H-ARF1 subject also indicates that this finding may not be a consistent phenotypic expression of all ARF1-related disorders.


Subject(s)
ADP-Ribosylation Factor 1 , Neurodevelopmental Disorders , Humans , Animals , Mice , ADP-Ribosylation Factor 1/chemistry , ADP-Ribosylation Factor 1/genetics , ADP-Ribosylation Factor 1/metabolism , Mutation, Missense , Female , Child , Golgi Apparatus/pathology , Endosomes/pathology , Neurodevelopmental Disorders/diagnosis , Neurodevelopmental Disorders/genetics , Neurodevelopmental Disorders/pathology
6.
Chem Biol Interact ; 364: 110058, 2022 Sep 01.
Article in English | MEDLINE | ID: mdl-35872048

ABSTRACT

Efficient endosomal escape after cellular uptake is a major challenge for the clinical application of therapeutic proteins. To overcome this obstacle, several strategies have been used to help protein drugs escape from endosomes without affecting the integrity of the cell membrane. Among them, some triterpenoid saponins with special structures were used to greatly enhance the anti-tumor therapeutic effect of protein toxins. Herein, we demonstrated that platycodin D (PD), polygalacin D (PGD) and platycodin D2 (PD2) from Platycodonis Radix significantly enhanced the ability of MHBP (a type I ribosome-inactivating protein toxin MAP30 fused with a cell-penetrating peptide HBP) to induce apoptosis in hepatoma cells. Based on the results of co-localization of endocytosed EGFP-HBP with a lysosomal probe and Galectin-9 vesicle membrane damage sensor, we demonstrated that PD, PGD and PD2 have the ability to promote endosomal escape of endocytic proteins without affecting the integrity of the plasma membrane. Meanwhile, we observed that cholesterol metabolism plays an important role in the activity of PD by RNA-seq analysis and KEGG pathway enrichment analysis, and confirm that PD, PGD and PD2 enhance the anti-tumor activity of MHBP by inducing the redistribution of free cholesterol and inhibiting the activity of cathepsin B and cathepsin D. Finally, we found that PD synergized with MHBP to induce caspase-dependent apoptosis through inhibiting Akt and ERK1/2 signaling pathways and activating JNK and p38 MAPK signaling pathways. This study provides new insights into the application of PD in cancer therapy and provides efficient and promising strategies for the cytosolic delivery of therapeutic proteins.


Subject(s)
Carcinoma, Hepatocellular , Liver Neoplasms , Saponins , Triterpenes , Apoptosis , Carcinoma, Hepatocellular/pathology , Cell Line, Tumor , Endosomes/metabolism , Endosomes/pathology , Humans , Liver Neoplasms/metabolism , MAP Kinase Signaling System , Proto-Oncogene Proteins c-akt/metabolism , Ribosomal Proteins/metabolism , Saponins/chemistry , Signal Transduction , Triterpenes/chemistry
7.
Int J Mol Sci ; 23(14)2022 Jul 11.
Article in English | MEDLINE | ID: mdl-35887006

ABSTRACT

Inherited neurodegenerative pathology characterized by lower muscle tone and increasing spasticity in the lower limbs is termed hereditary spastic paraplegia (HSP). HSP is associated with changes in about 80 genes and their products involved in various biochemical pathways, such as lipid droplet formation, endoplasmic reticulum shaping, axon transport, endosome trafficking, and mitochondrial function. With the inheritance patterns of autosomal dominant, autosomal recessive, X-linked recessive, and mitochondrial inheritance, HSP is prevalent around the globe at a rate of 1-5 cases in every 100,000 individuals. Recent technology and medical interventions somewhat aid in recognizing and managing the malaise. However, HSP still lacks an appropriate and adequate therapeutic approach. Current therapies are based on the clinical manifestations observed in the patients, for example, smoothing the relaxant spastic muscle and physiotherapies. The limited clinical trial studies contribute to the absence of specific pharmaceuticals for HSPs. Our current work briefly explains the causative genes, epidemiology, underlying mechanism, and the management approach undertaken to date. We have also mentioned the latest approved drugs to summarise the available knowledge on therapeutic strategies for HSP.


Subject(s)
Spastic Paraplegia, Hereditary , Endoplasmic Reticulum/pathology , Endosomes/pathology , Humans , Mitochondria/pathology , Mutation , Spastic Paraplegia, Hereditary/epidemiology , Spastic Paraplegia, Hereditary/genetics , Spastic Paraplegia, Hereditary/therapy
8.
Acta Neuropathol Commun ; 10(1): 4, 2022 01 08.
Article in English | MEDLINE | ID: mdl-34998435

ABSTRACT

The Bridging Integrator 1 (BIN1) gene is a major susceptibility gene for Alzheimer's disease (AD). Deciphering its pathophysiological role is challenging due to its numerous isoforms. Here we observed in Drosophila that human BIN1 isoform1 (BIN1iso1) overexpression, contrary to human BIN1 isoform8 (BIN1iso8) and human BIN1 isoform9 (BIN1iso9), induced an accumulation of endosomal vesicles and neurodegeneration. Systematic search for endosome regulators able to prevent BIN1iso1-induced neurodegeneration indicated that a defect at the early endosome level is responsible for the neurodegeneration. In human induced neurons (hiNs) and cerebral organoids, BIN1 knock-out resulted in the narrowing of early endosomes. This phenotype was rescued by BIN1iso1 but not BIN1iso9 expression. Finally, BIN1iso1 overexpression also led to an increase in the size of early endosomes and neurodegeneration in hiNs. Altogether, our data demonstrate that the AD susceptibility gene BIN1, and especially BIN1iso1, contributes to early-endosome size deregulation, which is an early pathophysiological hallmark of AD pathology.


Subject(s)
Alzheimer Disease/genetics , Drosophila Proteins/genetics , Endosomes/genetics , Nerve Degeneration/genetics , Neurons/pathology , Transcription Factors/genetics , Alzheimer Disease/pathology , Animals , Animals, Genetically Modified , Brain/metabolism , Brain/pathology , Drosophila melanogaster , Endosomes/metabolism , Endosomes/pathology , Humans , Induced Pluripotent Stem Cells/metabolism , Nerve Degeneration/pathology , Neurons/metabolism
9.
Cell Rep ; 37(13): 110182, 2021 12 28.
Article in English | MEDLINE | ID: mdl-34965419

ABSTRACT

Whether and how the pathogenic disruptions in endosomal trafficking observed in Alzheimer's disease (AD) are linked to its anatomical vulnerability remain unknown. Here, we began addressing these questions by showing that neurons are enriched with a second retromer core, organized around VPS26b, differentially dedicated to endosomal recycling. Next, by imaging mouse models, we show that the trans-entorhinal cortex, a region most vulnerable to AD, is most susceptible to VPS26b depletion-a finding validated by electrophysiology, immunocytochemistry, and behavior. VPS26b was then found enriched in the trans-entorhinal cortex of human brains, where both VPS26b and the retromer-related receptor SORL1 were found deficient in AD. Finally, by regulating glutamate receptor and SORL1 recycling, we show that VPS26b can mediate regionally selective synaptic dysfunction and SORL1 deficiency. Together with the trans-entorhinal's unique network properties, hypothesized to impose a heavy demand on endosomal recycling, these results suggest a general mechanism that can explain AD's regional vulnerability.


Subject(s)
Alzheimer Disease/pathology , Brain/pathology , Endosomes/pathology , LDL-Receptor Related Proteins/metabolism , Membrane Transport Proteins/metabolism , Vesicular Transport Proteins/metabolism , Vesicular Transport Proteins/physiology , Adult , Aged , Aged, 80 and over , Alzheimer Disease/genetics , Alzheimer Disease/metabolism , Animals , Brain/metabolism , Case-Control Studies , Endosomes/metabolism , Female , Humans , LDL-Receptor Related Proteins/genetics , Male , Membrane Transport Proteins/genetics , Mice , Mice, Inbred C57BL , Mice, Knockout , Middle Aged , Neuroimaging , Protein Transport , Vesicular Transport Proteins/chemistry , Vesicular Transport Proteins/genetics
10.
Exp Neurol ; 345: 113827, 2021 11.
Article in English | MEDLINE | ID: mdl-34363809

ABSTRACT

BACKGROUND AND PURPOSE: Dysfunction of the endolysosomal system can cause cell death. A key molecule for controlling the endolysosomal trafficking activities is the N-ethylmaleimide-sensitive factor (NSF) ATPase. This study investigates the cascades of NSF ATPase inactivation events, endolysosomal damage, cathepsin release, and neuronal death after focal brain ischemia. METHODS: A total of 62 rats were used in this study. They were subjected to sham surgery or 2 h of focal brain ischemia followed by 1, 4, and 24 h of reperfusion. Confocal microscopy and Western blot analysis were utilized to analyze the levels, redistribution, and co-localization of key proteins of the Golgi apparatus, late endosomes, endolysosomes, and lysosomes. Light and electron microscopy were used to examine the histopathology, protein aggregation, and endolysosomal ultrastructures. RESULTS: Two hours of focal brain ischemia in rats led to acute neuronal death at the striatal core in 4 h and a slower type of neuronal death in the neocortical area during 1-24 h reperfusion periods. Confocal microscopy showed that NSF immunoreactivity was irreversibly and selectively depleted from most, if not all, post-ischemic penumbral neurons. Western blot analysis further demonstrated that NSF depletion from brain sections was due to its deposition into dense inactive aggregates that could not be recognized by the NSF antibody. Commitantly, the Golgi apparatus was completely fragmented and cathepsin B (CTSB)-containing endolysosomal structures, as well as p62/SQSTM1- and EEA1-immunopositive structures were massively accumulated in the post-ischemic penumbral neurons. Ultimately, CTSB was released into the cytoplasm and extracellular space, causing stroke brain injury. CONCLUSION: Stroke Inactivates NSF, resulting in disruption of the reforming of functional endolysosomal compartments, blockade of the endocytic and autophagic pathways, a large scale of CTSB release into the cytoplasm and extracellular space, and stroke brain injury in the rat model.


Subject(s)
Brain Injuries/metabolism , Endosomes/metabolism , Lysosomes/metabolism , Stroke/metabolism , Animals , Brain Injuries/pathology , Cathepsin B/metabolism , Cathepsins/metabolism , Double-Blind Method , Endosomes/pathology , Lysosomes/pathology , Male , N-Ethylmaleimide-Sensitive Proteins/antagonists & inhibitors , N-Ethylmaleimide-Sensitive Proteins/deficiency , Protein Transport/physiology , Rats , Rats, Wistar , Stroke/pathology
11.
J Cell Biol ; 220(9)2021 09 06.
Article in English | MEDLINE | ID: mdl-34165494

ABSTRACT

The Scar/WAVE complex drives actin nucleation during cell migration. Interestingly, the same complex is important in forming membrane ruffles during macropinocytosis, a process mediating nutrient uptake and membrane receptor trafficking. Mammalian CYRI-B is a recently described negative regulator of the Scar/WAVE complex by RAC1 sequestration, but its other paralogue, CYRI-A, has not been characterized. Here, we implicate CYRI-A as a key regulator of macropinosome formation and integrin internalization. We find that CYRI-A is transiently recruited to nascent macropinosomes, dependent on PI3K and RAC1 activity. CYRI-A recruitment precedes RAB5A recruitment but follows sharply after RAC1 and actin signaling, consistent with it being a local inhibitor of actin polymerization. Depletion of both CYRI-A and -B results in enhanced surface expression of the α5ß1 integrin via reduced internalization. CYRI depletion enhanced migration, invasion, and anchorage-independent growth in 3D. Thus, CYRI-A is a dynamic regulator of macropinocytosis, functioning together with CYRI-B to regulate integrin trafficking.


Subject(s)
Endosomes/metabolism , Integrin alpha5beta1/genetics , Intracellular Signaling Peptides and Proteins/genetics , Mitochondrial Proteins/genetics , Pinocytosis/genetics , Wiskott-Aldrich Syndrome Protein Family/genetics , Actins/genetics , Actins/metabolism , Animals , COS Cells , Cell Line, Tumor , Cell Movement , Cell Proliferation , Chlorocebus aethiops , Endosomes/pathology , Endosomes/ultrastructure , Gene Expression Regulation , HEK293 Cells , Humans , Integrin alpha5beta1/metabolism , Intracellular Signaling Peptides and Proteins/metabolism , Mitochondrial Proteins/metabolism , Osteoblasts/metabolism , Osteoblasts/pathology , Phosphatidylinositol 3-Kinase/genetics , Phosphatidylinositol 3-Kinase/metabolism , Polymerization , Protein Transport , Signal Transduction , Wiskott-Aldrich Syndrome Protein Family/metabolism , rab5 GTP-Binding Proteins/genetics , rab5 GTP-Binding Proteins/metabolism , rac1 GTP-Binding Protein/genetics , rac1 GTP-Binding Protein/metabolism
12.
PLoS Genet ; 17(6): e1009603, 2021 06.
Article in English | MEDLINE | ID: mdl-34143769

ABSTRACT

The inability to maintain a strictly regulated endo(lyso)somal acidic pH through the proton-pumping action of the vacuolar-ATPases (v-ATPases) has been associated with various human diseases including heritable connective tissue disorders. Autosomal recessive (AR) cutis laxa (CL) type 2C syndrome is associated with genetic defects in the ATP6V1E1 gene and is characterized by skin wrinkles or loose redundant skin folds with pleiotropic systemic manifestations. The underlying pathological mechanisms leading to the clinical presentations remain largely unknown. Here, we show that loss of atp6v1e1b in zebrafish leads to early mortality, associated with craniofacial dysmorphisms, vascular anomalies, cardiac dysfunction, N-glycosylation defects, hypotonia, and epidermal structural defects. These features are reminiscent of the phenotypic manifestations in ARCL type 2C patients. Our data demonstrates that loss of atp6v1e1b alters endo(lyso)somal protein levels, and interferes with non-canonical v-ATPase pathways in vivo. In order to gain further insights into the processes affected by loss of atp6v1e1b, we performed an untargeted analysis of the transcriptome, metabolome, and lipidome in early atp6v1e1b-deficient larvae. We report multiple affected pathways including but not limited to oxidative phosphorylation, sphingolipid, fatty acid, and energy metabolism together with profound defects on mitochondrial respiration. Taken together, our results identify complex pathobiological effects due to loss of atp6v1e1b in vivo.


Subject(s)
Abnormalities, Multiple/genetics , Cutis Laxa/genetics , Epithelial Cells/metabolism , Skin/metabolism , Vacuolar Proton-Translocating ATPases/genetics , Zebrafish Proteins/genetics , Abnormalities, Multiple/metabolism , Abnormalities, Multiple/pathology , Animals , Cutis Laxa/metabolism , Cutis Laxa/pathology , Disease Models, Animal , Endosomes/metabolism , Endosomes/pathology , Epithelial Cells/pathology , Gene Expression Regulation , Humans , Larva/genetics , Larva/growth & development , Larva/metabolism , Lipidomics , Longevity/genetics , Lysosomes/metabolism , Lysosomes/pathology , Metabolome/genetics , Mitochondria/metabolism , Mitochondria/pathology , Oxidative Phosphorylation , Protein Isoforms/deficiency , Protein Isoforms/genetics , Skin/pathology , Syndrome , Transcriptome , Vacuolar Proton-Translocating ATPases/deficiency , Zebrafish/embryology , Zebrafish/genetics , Zebrafish/metabolism , Zebrafish Proteins/deficiency
13.
Biochem J ; 478(10): 1959-1976, 2021 05 28.
Article in English | MEDLINE | ID: mdl-34047789

ABSTRACT

Amphisomes are intermediate/hybrid organelles produced through the fusion of endosomes with autophagosomes within cells. Amphisome formation is an essential step during a sequential maturation process of autophagosomes before their ultimate fusion with lysosomes for cargo degradation. This process is highly regulated with multiple protein machineries, such as SNAREs, Rab GTPases, tethering complexes, and ESCRTs, are involved to facilitate autophagic flux to proceed. In neurons, autophagosomes are robustly generated in axonal terminals and then rapidly fuse with late endosomes to form amphisomes. This fusion event allows newly generated autophagosomes to gain retrograde transport motility and move toward the soma, where proteolytically active lysosomes are predominantly located. Amphisomes are not only the products of autophagosome maturation but also the intersection of the autophagy and endo-lysosomal pathways. Importantly, amphisomes can also participate in non-canonical functions, such as retrograde neurotrophic signaling or autophagy-based unconventional secretion by fusion with the plasma membrane. In this review, we provide an updated overview of the recent discoveries and advancements on the molecular and cellular mechanisms underlying amphisome biogenesis and the emerging roles of amphisomes. We discuss recent developments towards the understanding of amphisome regulation as well as the implications in the context of major neurodegenerative diseases, with a comparative focus on Alzheimer's disease and Parkinson's disease.


Subject(s)
Autophagosomes/pathology , Autophagy , Endosomes/pathology , Neurodegenerative Diseases/pathology , Neurons/pathology , Animals , Autophagosomes/metabolism , Endosomes/metabolism , Humans , Neurodegenerative Diseases/etiology , Neurodegenerative Diseases/metabolism , Neurons/metabolism
14.
Cells ; 10(3)2021 03 06.
Article in English | MEDLINE | ID: mdl-33800736

ABSTRACT

Parkinson's disease (PD) is a complex neurodegenerative disorder that is currently incurable. As a consequence of an incomplete understanding of the etiology of the disease, therapeutic strategies mainly focus on symptomatic treatment. Even though the majority of PD cases remain idiopathic (~90%), several genes have been identified to be causative for PD, facilitating the generation of animal models that are a good alternative to study disease pathways and to increase our understanding of the underlying mechanisms of PD. Drosophila melanogaster has proven to be an excellent model in these studies. In this review, we will discuss the different PD models in flies and key findings identified in flies in different affected pathways in PD. Several molecular changes have been identified, of which mitochondrial dysfunction and a defective endo-lysosomal pathway emerge to be the most relevant for PD pathogenesis. Studies in flies have significantly contributed to our knowledge of how disease genes affect and interact in these pathways enabling a better understanding of the disease etiology and providing possible therapeutic targets for the treatment of PD, some of which have already resulted in clinical trials.


Subject(s)
Drosophila Proteins/genetics , Drosophila melanogaster/genetics , Mitochondria/genetics , Parkinson Disease/genetics , Protein Serine-Threonine Kinases/genetics , Ubiquitin-Protein Ligases/genetics , Animals , Brain/metabolism , Brain/pathology , Disease Models, Animal , Drosophila Proteins/deficiency , Drosophila melanogaster/metabolism , Endosomes/metabolism , Endosomes/pathology , Gene Expression Regulation , Humans , Lysosomes/metabolism , Lysosomes/pathology , Metabolic Networks and Pathways/genetics , Mitochondria/metabolism , Mitochondria/pathology , Nerve Tissue Proteins/deficiency , Nerve Tissue Proteins/genetics , Oxidative Stress , Parkinson Disease/metabolism , Parkinson Disease/pathology , Protein Serine-Threonine Kinases/deficiency , Signal Transduction , Ubiquitin-Protein Ligases/deficiency
15.
Acta Neuropathol Commun ; 9(1): 70, 2021 04 14.
Article in English | MEDLINE | ID: mdl-33853668

ABSTRACT

Huntington's disease (HD) is a late onset, inherited neurodegenerative disorder for which early pathogenic events remain poorly understood. Here we show that mutant exon 1 HTT proteins are recruited to a subset of cytoplasmic aggregates in the cell bodies of neurons in brain sections from presymptomatic HD, but not wild-type, mice. This occurred in a disease stage and polyglutamine-length dependent manner. We successfully adapted a high-resolution correlative light and electron microscopy methodology, originally developed for mammalian and yeast cells, to allow us to correlate light microscopy and electron microscopy images on the same brain section within an accuracy of 100 nm. Using this approach, we identified these recruitment sites as single membrane bound, vesicle-rich endolysosomal organelles, specifically as (1) multivesicular bodies (MVBs), or amphisomes and (2) autolysosomes or residual bodies. The organelles were often found in close-proximity to phagophore-like structures. Immunogold labeling localized mutant HTT to non-fibrillar, electron lucent structures within the lumen of these organelles. In presymptomatic HD, the recruitment organelles were predominantly MVBs/amphisomes, whereas in late-stage HD, there were more autolysosomes or residual bodies. Electron tomograms indicated the fusion of small vesicles with the vacuole within the lumen, suggesting that MVBs develop into residual bodies. We found that markers of MVB-related exocytosis were depleted in presymptomatic mice and throughout the disease course. This suggests that endolysosomal homeostasis has moved away from exocytosis toward lysosome fusion and degradation, in response to the need to clear the chronically aggregating mutant HTT protein, and that this occurs at an early stage in HD pathogenesis.


Subject(s)
Endosomes/pathology , Huntington Disease/pathology , Inclusion Bodies/ultrastructure , Lysosomes/pathology , Neurons/pathology , Animals , Brain/metabolism , Brain/pathology , Brain/ultrastructure , Endosomes/metabolism , Endosomes/ultrastructure , Gene Knock-In Techniques , Humans , Huntingtin Protein/genetics , Huntington Disease/genetics , Huntington Disease/metabolism , Inclusion Bodies/metabolism , Inclusion Bodies/pathology , Lysosomes/metabolism , Lysosomes/ultrastructure , Mice , Microscopy, Electron, Transmission , Microscopy, Fluorescence , Mutation , Neurons/metabolism , Neurons/ultrastructure
16.
Brain ; 144(9): 2610-2615, 2021 10 22.
Article in English | MEDLINE | ID: mdl-33871597

ABSTRACT

The homotypic fusion and protein sorting (HOPS) complex is the structural bridge necessary for the fusion of late endosomes and autophagosomes with lysosomes. Recent publications linked mutations in genes encoding HOPS complex proteins with the aetiopathogenesis of inherited dystonias (i.e. VPS16, VPS41, and VPS11). Functional and microstructural studies conducted on patient-derived fibroblasts carrying mutations of HOPS complex subunits displayed clear abnormalities of the lysosomal and autophagic compartments. We propose to name this group of diseases HOPS-associated neurological disorders (HOPSANDs), which are mainly characterized by dystonic presentations. The delineation of HOPSANDs further confirms the connection of lysosomal and autophagic dysfunction with the pathogenesis of dystonia, prompting researchers to find innovative therapies targeting this pathway.


Subject(s)
Dystonia/metabolism , Endosomes/metabolism , Lysosomes/metabolism , Nervous System Diseases/metabolism , Protein Transport/physiology , Vesicular Transport Proteins/metabolism , Animals , Dystonia/genetics , Dystonia/pathology , Endosomes/genetics , Endosomes/pathology , Humans , Lysosomes/genetics , Lysosomes/pathology , Nervous System Diseases/genetics , Nervous System Diseases/pathology , Vesicular Transport Proteins/genetics
17.
Metab Brain Dis ; 36(6): 1087-1100, 2021 08.
Article in English | MEDLINE | ID: mdl-33881723

ABSTRACT

The endosomal-lysosomal system mediates the process of protein degradation through endocytic pathway. This system consists of early endosomes, late endosomes, recycling endosomes and lysosomes. Each component in the endosomal-lysosomal system plays individual crucial role and they work concordantly to ensure protein degradation can be carried out functionally. Dysregulation in the endosomal-lysosomal system can contribute to the pathogenesis of neurodegenerative diseases such as Alzheimer's disease (AD). In AD endosomal-lysosomal abnormalities are the earliest pathological features to note and hence it is important to understand the involvement of endosomal-lysosomal dysfunction in the pathogenesis of AD. In-depth understanding of this dysfunction can allow development of new therapeutic intervention to prevent and treat AD.


Subject(s)
Alzheimer Disease/drug therapy , Alzheimer Disease/metabolism , Endosomes/metabolism , Lysosomes/metabolism , Brain/metabolism , Brain/pathology , Endosomes/pathology , Humans , Lysosomes/pathology , Neurons/metabolism , Neurons/pathology , Proteolysis
18.
Ann Neurol ; 90(1): 4-14, 2021 07.
Article in English | MEDLINE | ID: mdl-33547827

ABSTRACT

Intracellular protein trafficking via the endosomes plays a key role in the maintenance of normal neuronal function. Although many diseases of the central nervous system exhibit specific pathological hallmarks, abnormalities of the endosome system are common traits for several of them, including Alzheimer disease (AD). Three main routes originate from the endosomes: the recycling, degradation, and retrograde pathways. Studies have shown that the majority of Down syndrome subjects develop AD pathology and manifest altered morphology and number of endosomes, and abnormalities in lysosome acidification and exosome secretion, suggesting that dysfunction of one of these pathways could play a functional role in the AD-like phenotype of the syndrome. Two of the major endosomal routes are mediated by the retromer complex, a multimeric system responsible for transport of cargo from the endosome to the trans-Golgi network or to the cell membrane. Recently, a new endosome system structurally related to the retromer, called "retriever," has been reported. Whereas we know a great deal about the neuropathophysiology of the retromer complex, no precise pathogenic role for the retriever has yet been identified. Here, we will review the neurobiology of the endosome system and its role as key player in the development of AD-like pathology in Down syndrome. Additionally, we will discuss current knowledge on these two main endosome systems, retromer and retriever, and their potential as novel therapeutic targets. ANN NEUROL 2021;90:4-14.


Subject(s)
Alzheimer Disease/metabolism , Brain/metabolism , Down Syndrome/metabolism , Endosomes/metabolism , Alzheimer Disease/pathology , Animals , Brain/pathology , Down Syndrome/pathology , Endosomes/pathology , Humans , trans-Golgi Network/metabolism
19.
Neurochem Int ; 145: 104988, 2021 05.
Article in English | MEDLINE | ID: mdl-33582164

ABSTRACT

The progressive deposition of misfolded and aggregated forms of Tau protein in the brain is a pathological hallmark of tauopathies, such as Alzheimer's disease (AD) and frontotemporal degeneration (FTD). The misfolded Tau can be released into the extracellular space and internalized by neighboring cells, acting as seeds to trigger the robust conversion of soluble Tau into insoluble filamentous aggregates in a prion-like manner, ultimately contributing to the progression of the disease. However, molecular mechanisms accountable for the propagation of Tau pathology are poorly defined. We reviewed the Tau processing imbalance in endosomal, lysosomal, and exosomal pathways in AD. Increased exosome release counteracts the endosomal-lysosomal dysfunction of Tau processing but increases the number of aggregates and the propagation of Tau. This review summarizes our current understanding of the underlying tauopathy mechanisms with an emphasis on the emerging role of the endosomal-lysosomal-exosome pathways in this process. The components CHMP6, TSG101, and other components of the ESCRT complex, as well as Rab GTPase such as Rab35 and Rab7A, regulate vesicle cargoes routing from endosome to lysosome and affect Tau traffic, degradation, or secretion. Thus, the significant molecular pathways that should be potential therapeutic targets for treating tauopathies are determined.


Subject(s)
Brain/metabolism , Endosomes/metabolism , Exosomes/metabolism , Lysosomes/metabolism , Signal Transduction/physiology , tau Proteins/metabolism , Animals , Brain/pathology , Endosomes/pathology , Exosomes/pathology , Humans , Lysosomes/pathology , Tauopathies/metabolism , Tauopathies/pathology
20.
Ann Neurol ; 89(4): 834-839, 2021 04.
Article in English | MEDLINE | ID: mdl-33452836

ABSTRACT

In this work, we describe the association of a novel homozygous VPS11 variant with adult-onset generalized dystonia, providing a detailed clinical report and biological evidence of disease mechanism. Vps11 is a subunit of the homotypic fusion and protein sorting (HOPS) complex, which promotes the fusion of late endosomes and autophagosomes with the lysosome. Functional studies on mutated fibroblasts showed marked lysosomal and autophagic abnormalities, which improved after overexpression of the wild type Vps11 protein. In conclusion, a deleterious VPS11 variant, damaging the autophagic and lysosomal pathways, is the probable genetic cause of a novel form of generalized dystonia. ANN NEUROL 2021;89:834-839.


Subject(s)
Dystonia/genetics , Vesicular Transport Proteins/genetics , Adult , Age of Onset , Amino Acid Sequence , Autophagy/genetics , Brain/diagnostic imaging , DNA/genetics , Dystonia/diagnostic imaging , Dystonia/etiology , Endosomes/pathology , Fibroblasts/pathology , Genetic Variation , Homozygote , Humans , Lysosomes/pathology , Magnetic Resonance Imaging , Mutation , Pedigree , Phagosomes/pathology , Exome Sequencing
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