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1.
Protein Sci ; 16(3): 355-61, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17322526

ABSTRACT

Eph receptors and ephrins play important roles in regulating cell migration and positioning during both normal and oncogenic tissue development. Using a surface plasma resonance (SPR) biosensor, we examined the binding kinetics of representative monomeric and dimeric ephrins to their corresponding Eph receptors and correlated the apparent binding affinity with their functional activity in a neuronal growth cone collapse assay. Our results indicate that the Eph receptor binding of dimeric ephrins, formed through fusion with disulfide-linked Fc fragments, is best described using a bivalent analyte model as a two-step process involving an initial monovalent 2:1 binding followed by a second bivalent 2:2 binding. The bivalent binding dramatically decreases the apparent dissociation rate constants with little effect on the initial association rate constants, resulting in a 30- to 6000-fold decrease in apparent equilibrium dissociation constants for the binding of dimeric ephrins to Eph receptors relative to their monomeric counterparts. Interestingly, the change was more prominent in the A-class ephrin/Eph interactions than in the B-class of ephrins to Eph receptors. The increase in apparent binding affinities correlated well with increased activation of Eph receptors and the resulting growth cone collapse. Our kinetic analysis and correlation of binding affinity with function helped us better understand the interactions between ephrins and Eph receptors and should be useful in the design of inhibitors that interfere with the interactions.


Subject(s)
Ephrin-A5/physiology , Ephrin-B2/physiology , Growth Cones/metabolism , Receptor, EphA3/physiology , Receptor, EphB2/physiology , Animals , Biosensing Techniques , Cell Line , Dimerization , Ephrin-A5/chemistry , Ephrin-A5/isolation & purification , Ephrin-B2/chemistry , Ephrin-B2/isolation & purification , Hippocampus/metabolism , Hippocampus/ultrastructure , Humans , Kinetics , Mice , Rats , Receptor, EphA3/chemistry , Receptor, EphA3/isolation & purification , Receptor, EphB2/chemistry , Receptor, EphB2/isolation & purification , Surface Plasmon Resonance
2.
Brain Res Dev Brain Res ; 159(1): 72-7, 2005 Sep 08.
Article in English | MEDLINE | ID: mdl-16083970

ABSTRACT

We have generated 362 bp and 547 bp partial sequences for Rana pipiens ephrin-A2 and ephrin-A5 mRNA, respectively. Translation homologies for the comparable segments of cDNA of chicken, mouse and human are 90.8, 86.9 and 84.4% for the ephrin-A2 sequence and 85.7, 85.0 and 85.0% for the ephrin-A5 sequence. Digoxigenin-labeled riboprobes were prepared and applied by means of in situ hybridization to whole-mounts of the brains of mature adults and expression patterns in tadpoles were also explored. The RNA probes revealed similar posterior (high) to anterior (low) expression gradients in the adult tectum, demonstrating that both ephrin-As are expressed in the adult Ranid frog tectum. Only the ephrin-A2 probe was tested on tadpole brain, yielding an appropriately graded expression pattern similar to the adult.


Subject(s)
Ephrin-A2/genetics , Ephrin-A5/genetics , RNA, Messenger/genetics , Rana pipiens/genetics , Animals , Chickens/genetics , Conserved Sequence/genetics , DNA, Complementary/analysis , DNA, Complementary/genetics , Ephrin-A2/isolation & purification , Ephrin-A2/metabolism , Ephrin-A5/isolation & purification , Ephrin-A5/metabolism , Evolution, Molecular , Gene Expression Regulation, Developmental/genetics , Humans/genetics , Larva/genetics , Larva/metabolism , Mice/genetics , Molecular Sequence Data , Nucleotides/genetics , RNA, Messenger/analysis , Rana pipiens/metabolism , Sequence Homology, Amino Acid , Sequence Homology, Nucleic Acid , Superior Colliculi/metabolism
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