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1.
Methods Mol Biol ; 2852: 65-81, 2025.
Article in English | MEDLINE | ID: mdl-39235737

ABSTRACT

Foodborne pathogens remain a serious health issue in developed and developing countries. Safeness of food products has been assured for years with culture-based microbiological methods; however, these present several limitations such as turnaround time and extensive hands-on work, which have been typically address taking advantage of DNA-based methods such as real-time PCR (qPCR). These, and other similar techniques, are targeted assays, meaning that they are directed for the specific detection of one specific microbe. Even though reliable, this approach suffers from an important limitation that unless specific assays are design for every single pathogen potentially present, foods may be considered erroneously safe. To address this problem, next-generation sequencing (NGS) can be used as this is a nontargeted method; thus it has the capacity to detect every potential threat present. In this chapter, a protocol for the simultaneous detection and preliminary serotyping of Salmonella enterica serovar Enteritidis, Salmonella enterica serovar Typhimurium, Listeria monocytogenes, and Escherichia coli O157:H7 is described.


Subject(s)
Food Microbiology , Foodborne Diseases , High-Throughput Nucleotide Sequencing , Listeria monocytogenes , Food Microbiology/methods , High-Throughput Nucleotide Sequencing/methods , Foodborne Diseases/microbiology , Foodborne Diseases/diagnosis , Listeria monocytogenes/isolation & purification , Listeria monocytogenes/genetics , Escherichia coli O157/isolation & purification , Escherichia coli O157/genetics , Humans , Serotyping/methods , DNA, Bacterial/genetics , DNA, Bacterial/analysis , Salmonella typhimurium/isolation & purification , Salmonella typhimurium/genetics
2.
Methods Mol Biol ; 2852: 255-272, 2025.
Article in English | MEDLINE | ID: mdl-39235749

ABSTRACT

Metabolomics is the study of low molecular weight biochemical molecules (typically <1500 Da) in a defined biological organism or system. In case of food systems, the term "food metabolomics" is often used. Food metabolomics has been widely explored and applied in various fields including food analysis, food intake, food traceability, and food safety. Food safety applications focusing on the identification of pathogen-specific biomarkers have been promising. This chapter describes a nontargeted metabolite profiling workflow using gas chromatography coupled with mass spectrometry (GC-MS) for characterizing three globally important foodborne pathogens, Escherichia coli O157:H7, Listeria monocytogenes, and Salmonella enterica, from selective enrichment liquid culture media. The workflow involves a detailed description of food spiking experiments followed by procedures for the extraction of polar metabolites from media, the analysis of the extracts using GC-MS, and finally chemometric data analysis using univariate and multivariate statistical tools to identify potential pathogen-specific biomarkers.


Subject(s)
Biomarkers , Food Microbiology , Gas Chromatography-Mass Spectrometry , Listeria monocytogenes , Metabolomics , Metabolomics/methods , Gas Chromatography-Mass Spectrometry/methods , Biomarkers/analysis , Food Microbiology/methods , Listeria monocytogenes/metabolism , Listeria monocytogenes/isolation & purification , Salmonella enterica/metabolism , Escherichia coli O157/metabolism , Escherichia coli O157/isolation & purification , Foodborne Diseases/microbiology , Metabolome
3.
Food Microbiol ; 124: 104610, 2024 Dec.
Article in English | MEDLINE | ID: mdl-39244362

ABSTRACT

This study aimed to assess the impact of adaptation of ten strains of O157:H7 and non-O157 Escherichia coli to low pH (acid shock or slow acidification) and the effects of this exposure or not on the resistance of E. coli strains to UV radiation in orange juice (pH 3.5). The acid-shocked cells were obtained through culture in tryptic soy broth (TSB) with a final pH of 4.8, which was adjusted by hydrochloric, lactic, or citric acid and subsequently inoculated in orange juice at 4 °C for 30 days. No significant differences (p > 0.05) in survival in orange juice were observed between the serotypes O157:H7 and non-O157:H7 for acid-shocked experiments. After slow acidification, where the cells were cultured in TSB supplemented with glucose 1% (TSB + G), a significant increase (p < 0.05) in survival was observed for all strains evaluated. The D-values (radiation dose (J/cm2) necessary to decrease the microbial population by 90%) were determined as the inverse of the slopes of the regressions (k) obtained by plotting log (N/N0). The results show that among the strains tested, E. coli O157:H7 (303/00) and O26:H11 were the most resistant and sensitive strains, respectively. According to our results, the method of acid adaptation contributes to increasing the UV resistance for most of the strains tested.


Subject(s)
Adaptation, Physiological , Citrus sinensis , Escherichia coli O157 , Fruit and Vegetable Juices , Ultraviolet Rays , Escherichia coli O157/radiation effects , Escherichia coli O157/growth & development , Escherichia coli O157/drug effects , Fruit and Vegetable Juices/microbiology , Fruit and Vegetable Juices/analysis , Citrus sinensis/microbiology , Citrus sinensis/chemistry , Hydrogen-Ion Concentration , Escherichia coli/radiation effects , Escherichia coli/drug effects , Acids/pharmacology , Colony Count, Microbial , Food Microbiology , Microbial Viability/radiation effects , Microbial Viability/drug effects , Food Irradiation
4.
Food Microbiol ; 124: 104622, 2024 Dec.
Article in English | MEDLINE | ID: mdl-39244373

ABSTRACT

Escherichia coli O157:H7 is a pathogenic serotype of Escherichia coli. Consumption of food contaminated with E. coli O157:H7 could cause a range of diseases. Therefore, it is of great importance to establish rapid and accurate detection methods for E. coli O157:H7 in food. In this study, based on LAMP and combined with the CRISPR/cas12a system, a sensitive and specific rapid detection method for E. coli O157:H7 was established, and One-Pot detection method was also constructed. The sensitivity of this method could stably reach 9.2 × 10° CFU/mL in pure culture, and the whole reaction can be completed within 1 h. In milk, E. coli O157:H7 with an initial contamination of 7.4 × 10° CFU/mL only needed to be cultured for 3 h to be detected. The test results can be judged by the fluorescence curve or by visual observation under a UV lamp, eliminating instrument limitations and One-Pot detection can effectively prevent the problem of false positives. In a word, the LAMP-CRISPR/cas12a system is a highly sensitive and convenient method for detecting E. coli O157:H7.


Subject(s)
CRISPR-Cas Systems , Escherichia coli O157 , Food Microbiology , Milk , Nucleic Acid Amplification Techniques , Escherichia coli O157/genetics , Escherichia coli O157/isolation & purification , Milk/microbiology , Food Microbiology/methods , Nucleic Acid Amplification Techniques/methods , Animals , Sensitivity and Specificity , Food Contamination/analysis , Molecular Diagnostic Techniques/methods
5.
Compr Rev Food Sci Food Saf ; 23(5): e70012, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39230390

ABSTRACT

Recent advancements in modeling suggest that microbial inactivation in leafy greens follows a nonlinear pattern, rather than the simple first-order kinetics. In this study, we evaluated 17 inactivation models commonly used to describe microbial decline and established the conditions that govern microbial survival on leafy greens. Through a systematic review of 65 articles, we extracted 530 datasets to model the fate of Shiga toxin-producing Escherichia coli O157:H7 on leafy greens. Various factor analysis methods were employed to evaluate the impact of identified conditions on survival metrics. A two-parameter model (jm2) provided the best fit to most of both natural and antimicrobial-induced persistence datasets, whereas the one-parameter exponential model provided the best fit to less than 20% of the datasets. The jm2 model (adjusted R2 = .89) also outperformed the exponential model (adjusted R2 = .58) in fitting the pooled microbial survival data. In the context of survival metrics, the model averaging approach generated higher values than the exponential model for >4 log reduction times (LRTs), suggesting that the exponential model may be overpredicting inactivation at later time points. The random forest technique revealed that temperature and inoculum size were common factors determining inactivation in both natural and antimicrobial-induced die-offs.. The findings show the limitations of relying on the first-order survival metric of 1 LRT and considering nonlinear inactivation in produce safety decision-making.


Subject(s)
Escherichia coli O157 , Escherichia coli O157/drug effects , Food Microbiology , Vegetables/microbiology , Microbial Viability , Plant Leaves/microbiology , Plant Leaves/chemistry
6.
Compr Rev Food Sci Food Saf ; 23(5): e70013, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39230391

ABSTRACT

The accuracy of predictive microbial models used in quantitative microbial risk assessment (QMRA) relies on the relevancy of conditions influencing growth or inactivation. The continued use of log-linear models in studies remains widespread, despite evidence that they fail to accurately account for biphasic kinetics or include parameters to account for the effect of environmental conditions within the model equation. Although many experimental studies detail conditions of interest, studies that do not do so lead to uncertainty in QMRA modeling because the applicability of the predictive microbial models to the conditions in the risk scenarios is questionable or must be extrapolated. The current study systematically reviewed 65 articles that provided quantitative data and documented the conditions influencing the inactivation or growth of Shiga toxin-producing Escherichia coli (STEC) O157:H7 in leafy greens. The conditions were identified and categorized as environmental, biological, chemical, and/or processing. Our study found that temperature (n = 37 studies) and sanitizing and washing procedures (n = 12 studies) were the most studied conditions in the farm-to-table continuum of leafy greens. In addition, relative humidity was also established to affect growth and inactivation in more than one stage in the continuum. This study proposes the evaluation of the interactive effects of multiple conditions in processing and storage stages from controlled experiments as they relate to the fate of STEC O157:H7 in leafy greens for future quantitative analysis.


Subject(s)
Escherichia coli O157 , Escherichia coli O157/growth & development , Food Microbiology , Temperature , Vegetables/microbiology , Food Handling/methods , Risk Assessment , Shiga-Toxigenic Escherichia coli/growth & development , Shiga-Toxigenic Escherichia coli/physiology
7.
Euro Surveill ; 29(36)2024 Sep.
Article in English | MEDLINE | ID: mdl-39239728

ABSTRACT

Shiga-toxin producing Escherichia coli (STEC) O157 is a food-borne pathogen which causes gastrointestinal illness in humans. Ruminants are considered the main reservoir of infection, and STEC exceedance has been associated with heavy rainfall. In September 2022, a large outbreak of STEC O157:H7 was identified in the United Kingdom (UK). A national-level investigation was undertaken to identify the source of the outbreak and inform risk mitigation strategies. Whole genome sequencing (WGS) was used to identify outbreak cases. Overall, 259 cases with illness onset dates between 5 August and 12 October 2022, were confirmed across the UK. Epidemiological investigations supported a UK grown, nationally distributed, short shelf-life food item as the source of the outbreak. Analytical epidemiology and food chain analysis suggested lettuce as the likely vehicle of infection. Food supply chain tracing identified Grower X as the likely implicated producer. Independent of the food chain investigations, a novel geospatial analysis triangulating meteorological, flood risk, animal density and land use data was developed, also identifying Grower X as the likely source. Novel geospatial analysis and One Health approaches are potential tools for upstream data analysis to predict and prevent contamination events before they occur and to support evidence generation in outbreak investigations.


Subject(s)
Climate Change , Disease Outbreaks , Escherichia coli Infections , Escherichia coli O157 , Food Microbiology , Foodborne Diseases , Lactuca , Lactuca/microbiology , Humans , Escherichia coli Infections/epidemiology , Escherichia coli Infections/microbiology , Escherichia coli Infections/transmission , United Kingdom/epidemiology , Escherichia coli O157/isolation & purification , Escherichia coli O157/genetics , Foodborne Diseases/epidemiology , Foodborne Diseases/microbiology , Whole Genome Sequencing , Shiga-Toxigenic Escherichia coli/isolation & purification , Shiga-Toxigenic Escherichia coli/genetics , Adult , Middle Aged , Female , Male , Food Contamination/analysis , Aged , Animals , Adolescent , Child
8.
Int J Mol Sci ; 25(17)2024 Aug 25.
Article in English | MEDLINE | ID: mdl-39273173

ABSTRACT

Escherichia coli O157:H7 (E. coli O157) is known for causing severe foodborne illnesses such as hemorrhagic colitis and hemolytic uremic syndrome. Although E. coli O157 is typically regarded as an extracellular pathogen and a weak biofilm producer, some E. coli O157 strains, including a clinical strain ATCC 43895, exhibit a notable ability to invade bovine crypt cells and other epithelial cells, as well as to form robust biofilm. This invasive strain persists in the bovine host significantly longer than non-invasive strains. Various surface-associated factors, including lipopolysaccharides (LPS), flagella, and other adhesins, likely contribute to this enhanced invasiveness and biofilm formation. In this study, we constructed a series of LPS-core deletion mutations (waaI, waaG, waaF, and waaC) in E. coli O157 ATCC 43895, resulting in stepwise truncations of the LPS. This approach enabled us to investigate the effects on the biosynthesis of key surface factors, such as flagella and curli, and the ability of this invasive strain to invade host cells. We confirmed the LPS structure and found that all LPS-core mutants failed to form biofilms, highlighting the crucial role of core oligosaccharides in biofilm formation. Additionally, the LPS inner-core mutants ΔwaaF and ΔwaaC lost the ability to produce flagella and curli. Furthermore, these inner-core mutants exhibited a dramatic reduction in adherence to and invasion of epithelial cells (MAC-T), showing an approximately 100-fold decrease in cell invasion compared with the outer-core mutants (waaI and waaG) and the wild type. These findings underscore the critical role of LPS-core truncation in impairing flagella and curli biosynthesis, thereby reducing the invasion capability of E. coli O157 ATCC 43895.


Subject(s)
Biofilms , Escherichia coli O157 , Flagella , Lipopolysaccharides , Flagella/metabolism , Flagella/genetics , Lipopolysaccharides/biosynthesis , Escherichia coli O157/genetics , Escherichia coli O157/metabolism , Escherichia coli O157/physiology , Biofilms/growth & development , Animals , Cattle , Bacterial Proteins/metabolism , Bacterial Proteins/genetics , Escherichia coli Proteins/metabolism , Escherichia coli Proteins/genetics , Bacterial Adhesion , Epithelial Cells/microbiology , Epithelial Cells/metabolism
9.
Ann Ist Super Sanita ; 60(3): 191-196, 2024.
Article in English | MEDLINE | ID: mdl-39269000

ABSTRACT

INTRODUCTION: We analyzed the expression of several genes implicated in the pathogenicity of Escherichia coli O157:H7, treating bacteria with Esc(1-21), a derivative of peptide esculentin-1 in combination with three essential oils obtained from plants from the Cympopogon genus. METHODS: We used the checkerboard assay to determine the antimicrobial activity of the combinations. We analyzed the expression of some genes implicated in the pathogenicity and quorum sensing system of E. coli O157:H7 by real-time RT-PCR technique. RESULTS: Treatment of the bacteria with the peptide combined with oils had an efficacious antimicrobial activity. The analysis of gene expression showed that all used combinations regulate positively the espAD and ler genes, located in the pathogenicity island, named the locus of enterocyte effacement. None of the combinations affects the quorum sensing genes: lsrABCFKR and qseBC. CONCLUSIONS: This study demonstrates that the use of essential oil/peptide combinations can be effective in fighting microbial infections.


Subject(s)
Cymbopogon , Escherichia coli O157 , Gene Expression Regulation, Bacterial , Oils, Volatile , Oils, Volatile/pharmacology , Escherichia coli O157/drug effects , Escherichia coli O157/genetics , Cymbopogon/chemistry , Gene Expression Regulation, Bacterial/drug effects , Transcription, Genetic/drug effects , Quorum Sensing/drug effects
10.
BMJ Case Rep ; 17(8)2024 Aug 22.
Article in English | MEDLINE | ID: mdl-39179258

ABSTRACT

A woman in her 40s with no medical history presented on hospital day #0 with 3 days of epigastric pain, nausea, vomiting and bloody diarrhoea. Initial blood work demonstrated acute kidney injury with metabolic acidosis with an elevated anion gap, thrombocytopenia, an elevated lactate dehydrogenase, and an undetectable haptoglobin. She was quickly diagnosed with haemolytic uraemic syndrome from Shiga toxin-producing O157:H7 Escherichia coli Her microangiopathic haemolytic anaemia and renal failure progressively worsened and only improved after the initiation of eculizumab, a monoclonal antibody directed against complement component C5. We report a case of Shiga toxin-producing E. coli-haemolytic uraemia syndrome with a complement-mediated component.


Subject(s)
Antibodies, Monoclonal, Humanized , Hemolytic-Uremic Syndrome , Humans , Antibodies, Monoclonal, Humanized/therapeutic use , Female , Hemolytic-Uremic Syndrome/drug therapy , Adult , Escherichia coli Infections/drug therapy , Escherichia coli Infections/complications , Escherichia coli O157 , Acute Kidney Injury/drug therapy , Acute Kidney Injury/etiology , Complement Inactivating Agents/therapeutic use
11.
Biosens Bioelectron ; 264: 116661, 2024 Nov 15.
Article in English | MEDLINE | ID: mdl-39142229

ABSTRACT

As a foodborne pathogen capable of causing severe illnesses, early detection of Escherichia coli O157:H7 (E. coli O157:H7) is crucial for ensuring food safety. While Förster resonance energy transfer (FRET) is an efficient and precise detection technique, there remains a need for amplification strategies to detect low concentrations of E. coli O157:H7. In this study, we presented a phage (M13)-induced "one to many" FRET platform for sensitively detecting E. coli O157:H7. The aptamers, which specifically recognize E. coli O157:H7 were attached to magnetic beads as capture probes for separating E. coli O157:H7 from food samples. The peptide O157S, which specifically targets E. coli O157:H7, and streptavidin binding peptide (SBP), which binds to streptavidin (SA), were displayed on the P3 and P8 proteins of M13, respectively, to construct the O157S-M13K07-SBP phage as a detection probe for signal output. Due to the precise distance (≈3.2 nm) between two neighboring N-terminus of P8 protein, the SA-labeled FRET donor and acceptor can be fixed at the Förster distance on the surface of O157S-M13K07-SBP via the binding of SA and SBP, inducing FRET. Moreover, the P8 protein, with ≈2700 copies, enabled multiple FRET (≈605) occurrences, amplifying FRET in each E. coli O157:H7 recognition event. The O157S-M13K07-SBP-based FRET sensor can detect E. coli O157:H7 at concentration as low as 6 CFU/mL and demonstrates excellent performance in terms of selectivity, detection time (≈3 h), accuracy, precision, practical application, and storage stability. In summary, we have developed a powerful tool for detecting various targets in food safety, environmental monitoring, and medical diagnosis.


Subject(s)
Biosensing Techniques , Escherichia coli O157 , Fluorescence Resonance Energy Transfer , Food Microbiology , Escherichia coli O157/isolation & purification , Escherichia coli O157/virology , Fluorescence Resonance Energy Transfer/methods , Biosensing Techniques/methods , Bacteriophage M13/chemistry , Humans , Streptavidin/chemistry , Limit of Detection , Food Contamination/analysis , Aptamers, Nucleotide/chemistry , Escherichia coli Infections/microbiology , Escherichia coli Infections/diagnosis
12.
PLoS One ; 19(8): e0306691, 2024.
Article in English | MEDLINE | ID: mdl-39088560

ABSTRACT

BACKGROUND: The worldwide increase in multidrug resistance is a major threat to public health. One particular concern is the presence of Escherichia coli strains that carry Extended-Spectrum ß-Lactamase (ESBL) and Carbapenemase enzymes, which can make multiple antibiotics ineffective. This complicates treatment strategies and raises the risk of illness and death. The aim of this study was to isolate E. coli O157:H7, assess its susceptibility against antimicrobial agents, and determine the presence of ESBL and Carbapenemase production in stool samples collected from diarrheic patients in Shashemene, west Arsi, Ethiopia from July to November 2022. METHODS: The samples were cultured McConkey Agar and E. coli were isolated and identified by standard biochemical tests using API 20E. E. coli O157:H7 was further identified using sorbitol McConkey Agar and antisera for O157 antigen test. The antimicrobial susceptibility test was performed using the Kirby-Bauer disc diffusion method using different antibiotics. Each identified isolate was screened and tested for phenotypical ESBL and Carbapenemase production using combined disc method and modified carbapenem inactivation method, respectively. Bivariant and multivariant analyses were employed using a logistic regression model for further analysis and were interpreted based on the odds ratio and level of statistical significance at a p-value <0.05 with 95% confidence interval. RESULTS: E. coli O157:H7 strain was found from 9% (38/423) study participants. The majority of the participants [61.9% (262/423)] were males; and 19.1% (81/ 423) of the participants were under five children. Living in urban areas, having domestic animals, and ≥5 family size in the household were identified as statistically significant factors associated with E. coli O157:H7. Twenty-seven (71.1%) and 12 (31.6%) of the 38 E. coli O157:H7 isolates were phenotypically confirmed to be ESBL and carbapenemase producers, respectively. All isolates were resistant against Ampicillin, but sensitive to ciprofloxacin. High resistance to Ampicillin and Amoxicillin/Clavulanic acid was observed among the ESBL and carbapenemase producing isolates also. The extent of detection of multidrug resistant E. coli O157:H7 isolates against three or more classes of antimicrobial agents tested was alarmingly very high (84%). CONCLUSION: The E. coli O157:H7 isolates in this study showed a significant resistance to certain antimicrobials that were tested. The level of ESBL and Carbapenemase production among these isolates was found to be quite high. We observed a high resistance to Ampicillin and Amoxicillin/Clavulanic acid among the ESBL and carbapenemase producing isolates. Ciprofloxacin was found to be the most effective drug against both the ESBL producers and nonproducers.


Subject(s)
Bacterial Proteins , Diarrhea , Escherichia coli Infections , Escherichia coli O157 , beta-Lactamases , beta-Lactamases/metabolism , Ethiopia/epidemiology , Humans , Diarrhea/microbiology , Escherichia coli O157/isolation & purification , Escherichia coli O157/drug effects , Escherichia coli O157/enzymology , Male , Female , Escherichia coli Infections/microbiology , Escherichia coli Infections/drug therapy , Escherichia coli Infections/epidemiology , Child, Preschool , Adult , Bacterial Proteins/metabolism , Child , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Adolescent , Microbial Sensitivity Tests , Infant , Young Adult , Middle Aged , Feces/microbiology
13.
Int J Food Microbiol ; 424: 110854, 2024 Nov 02.
Article in English | MEDLINE | ID: mdl-39111156

ABSTRACT

The aim of this study was to characterize the pulp of Rheum ribes L. and to determine the effect of the pulp enriched with eugenol (1 %) or thymol (1 %) on the microbiological and physico-chemical quality of chicken breast fillets. Chicken breast fillets, inoculated with Listeria monocytogenes, Salmonella enterica subsp. enterica serovar Typhimurium, and Escherichia coli O157:H7 (~6.0 log10), were marinated for 24 h in a mixture prepared from a combination of Rheum ribes L. pulp with eugenol or thymol. The quality parameters were analyzed for 15 days at +4 °C. The Rheum ribes L. pulp was found to have high antioxidant activity, high total phenolic content and contained 22 different phenolic substances, among which rutin ranked first. The pulp contained high levels of p-xylene and o-xylene as volatile substances and citric acid as an organic acid. The combination of Pulp + Eugenol + Thymol (PET) reduced the number of pathogens in chicken breast fillets by 2.03 to 3.50 log10 on day 0 and by 2.25 to 4.21 log10 on day 15, compared to the control group (P < 0.05). The marinating treatment significantly lowered the pH values of fillet samples on the first day of the study, compared to the control group (P < 0.05). During storage, TVB-N levels showed slower increase in the treatment groups compared to the control group (P < 0.05). In addition, the marinating process led to significant changes in physicochemical parameters such as water holding capacity, color, texture, cooking loss, and drip loss compared to the control group (P < 0.05). In conclusion, the results of this study showed that the pulp of Rheum ribes L., which has a high antioxidant capacity and contains various bioactive compounds. Furthermore, S. Typhimurium, E. coli O157:H7 and L. monocytogenes were inhibited considerably by marinating Rheum ribes L. pulp with a combination of eugenol and thymol.


Subject(s)
Chickens , Eugenol , Rheum , Thymol , Animals , Thymol/pharmacology , Eugenol/pharmacology , Rheum/chemistry , Food Preservation/methods , Food Microbiology , Listeria monocytogenes/drug effects , Listeria monocytogenes/growth & development , Meat/microbiology , Escherichia coli O157/drug effects , Escherichia coli O157/growth & development , Salmonella typhimurium/drug effects , Salmonella typhimurium/growth & development , Plant Extracts/pharmacology , Antioxidants/pharmacology , Colony Count, Microbial
14.
Microb Pathog ; 194: 106832, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39089511

ABSTRACT

Enterohemorrhagic Escherichia coli O157:H7 (EHEC O157:H7) and Enterotoxigenic E. coli (ETEC) have been found to readily develop biofilms on cucumber (Cucumis sativus L.), presenting a significant risk to the safety of ready-to-eat vegetables. This study aimed to assess the effectiveness of the lytic bacteriophage vB_EcoM_SQ17 (SQ17) against EHEC O157:H7 and ETEC biofilms on cucumber. Here, we evaluated the efficacy of phage SQ17 on the formation and reduction of biofilms formed by EHEC O157:H7 and ETEC strains on various surfaces, including polystyrene, poly-d-lysine precoated films, and fresh-cut cucumber, at different temperatures. Phage SQ17 significantly inhibited ETEC biofilm formation, reducing the number of adhered cells by 0.15 log CFU/mL at 37 °C. Treatment with phage SQ17 also significantly decreased the number of adhered cells in established biofilms via SEM observation. Moreover, phage SQ17 effectively reduced the biomass of EHEC O157:H7 and ETEC biofilms by over 54.8 % at 37 °C after 24 h of incubation. Following phage treatment, the viability of adhered EHEC O157:H7 cells decreased by 1.37 log CFU/piece and 0.46 log CFU/piece in biofilms on cucumber at 4 °C and 25 °C, respectively. Similarly, the viability of ETEC cells decreased by 1.07 log CFU/piece and 0.61 log CFU/piece in biofilms on cucumber at 4 °C and 25 °C, respectively. These findings suggest that phage SQ17 shows promise as a potential strategy for eradicating pathogenic E. coli biofilms on cucumber.


Subject(s)
Bacteriophages , Biofilms , Cucumis sativus , Enterotoxigenic Escherichia coli , Escherichia coli O157 , Biofilms/growth & development , Cucumis sativus/microbiology , Cucumis sativus/virology , Escherichia coli O157/virology , Escherichia coli O157/physiology , Enterotoxigenic Escherichia coli/virology , Enterotoxigenic Escherichia coli/physiology , Bacteriophages/physiology , Food Microbiology , Temperature , Bacterial Adhesion
15.
Foodborne Pathog Dis ; 21(9): 578-585, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38959170

ABSTRACT

Effectively managing foodborne pathogens is imperative in food processing, where probiotics play a crucial role in pathogen control. This study focuses on the Lactiplantibacillus plantarum AR113 and its gene knockout strains, exploring their antimicrobial properties against Escherichia coli O157:H7 and Staphylococcus aureus. Antimicrobial assays revealed that the inhibitory effect of AR113 increases with its growth and the potential bacteriostatic substance is acidic. AR113Δldh, surpassed AR113Δ0273&2024, exhibited a complete absence of bacteriostatic properties, which indicates that lactic acid is more essential than acetic acid in the bacteriostatic effect of AR113. However, the exogenous acid validation test affirmed the equivalent superior bacteriostatic effect of lactic acid and acetic acid. Notably, AR113 has high lactate production and deletion of the ldh gene not only lacks lactate production but also affects acetic production. This underscores the ldh gene's pivotal role in the antimicrobial activity of AR113. In addition, among all the selected knockout strains, AR113ΔtagO and ΔccpA also had lower antimicrobial effects, suggesting the importance of tagO and ccpA genes of AR113 in pathogen control. This study contributes insights into the antimicrobial potential of AR113 and stands as the pioneering effort to use knockout strains for comprehensive bacteriostatic investigations.


Subject(s)
Acetic Acid , Lactic Acid , Staphylococcus aureus , Staphylococcus aureus/genetics , Staphylococcus aureus/drug effects , Acetic Acid/pharmacology , Acetic Acid/metabolism , Lactic Acid/metabolism , Escherichia coli O157/genetics , Food Microbiology , Gene Knockout Techniques , L-Lactate Dehydrogenase/metabolism , L-Lactate Dehydrogenase/genetics , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Probiotics , Lactobacillus plantarum/genetics , Anti-Bacterial Agents/pharmacology
16.
Microbiol Spectr ; 12(8): e0397823, 2024 Aug 06.
Article in English | MEDLINE | ID: mdl-38990030

ABSTRACT

It is critical to develop quick, accurate, and efficient sterilization for detecting Escherichia coli O157:H7 in order to prevent infections and outbreaks of foodborne illnesses. Herein, we established a colorimetric biosensor with sterilizing properties using copper selenide nanoparticles to detect E. coli O157:H7. The sample was mixed with magnetic nanoprobes and nanozyme probes to form a sandwich structure, and then the unbound nanozyme probes were collected by magnetic separation. Finally, the 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonate)-hydrogen peroxide (H2O2) reporting system was added for signal amplification. The change from colorless to green can be seen with the naked eye. Under the optimal conditions, the detection range of E. coli O157:H7 was 102-106 CFU/mL, and the detection limit was 0.35 × 102 CFU/mL. The total detection time was 80 minutes, which can be successfully applied to milk and mineral water. In addition, the colorimetric sensor can kill the target bacteria by irradiating it under a 980-nm laser for 5 minutes. In conclusion, this sensor is a promising tool for rapidly detecting foodborne pathogens and promptly eliminating bacteria. IMPORTANCE: Escherichia coli O157:H7 is a major threat to public health. At present, the detection methods for E. coli O157:H7 mainly include traditional bacterial culture, immunology (enzyme-linked immune-sorbent assay) and molecular biology techniques (polymerase chain reaction). These methods have the limitations of professional operation, waste of time and energy, and high cost. Therefore, we have developed a simple, fast, bactericidal colorimetric biosensor to detect E. coli. O157:H7. The entire process was completed in 80 minutes. The method has been successfully applied to milk and mineral water samples with satisfactory results, proving that the method is an effective method for real-time detection and inactivation of bacteria.


Subject(s)
Biosensing Techniques , Colorimetry , Escherichia coli O157 , Food Microbiology , Escherichia coli O157/isolation & purification , Colorimetry/methods , Biosensing Techniques/methods , Food Microbiology/methods , Copper , Milk/microbiology , Animals , Nanoparticles/chemistry , Hydrogen Peroxide/pharmacology
17.
Mikrochim Acta ; 191(8): 441, 2024 07 02.
Article in English | MEDLINE | ID: mdl-38954045

ABSTRACT

A ratiometric SERS aptasensor based on catalytic hairpin self-assembly (CHA) mediated cyclic signal amplification strategy was developed for the rapid and reliable determination of Escherichia coli O157:H7. The recognition probe was synthesized by modifying magnetic beads with blocked aptamers, and the SERS probe was constructed by functionalizing gold nanoparticles (Au NPs) with hairpin structured DNA and 4-mercaptobenzonitrile (4-MBN). The recognition probe captured E. coli O157:H7 specifically and released the blocker DNA, which activated the CHA reaction on the SERS probe and turned on the SERS signal of 6-carboxyl-x-rhodamine (ROX). Meanwhile, 4-MBN was used as an internal reference to calibrate the matrix interference. Thus, sensitive and reliable determination and quantification of E. coli O157:H7 was established using the ratio of the SERS signal intensities of ROX to 4-MBN. This aptasensor enabled detection of 2.44 × 102 CFU/mL of E. coli O157:H7 in approximately 3 h without pre-culture and DNA extraction. In addition, good reliability and excellent reproducibility were observed for the determination of E. coli O157:H7 in spiked water and milk samples. This study offered a new solution for the design of rapid, sensitive, and reliable SERS aptasensors.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Escherichia coli O157 , Gold , Limit of Detection , Metal Nanoparticles , Milk , Spectrum Analysis, Raman , Escherichia coli O157/isolation & purification , Aptamers, Nucleotide/chemistry , Metal Nanoparticles/chemistry , Gold/chemistry , Milk/microbiology , Milk/chemistry , Spectrum Analysis, Raman/methods , Biosensing Techniques/methods , Animals , Catalysis , Inverted Repeat Sequences , Food Contamination/analysis , Water Microbiology , Reproducibility of Results
18.
Mikrochim Acta ; 191(8): 453, 2024 07 06.
Article in English | MEDLINE | ID: mdl-38970675

ABSTRACT

An electrochemical biosensor has been developed for detection of Escherichia coli O157 by integrating lateral flow with screen-printed electrodes. The screen-printed electrodes were attached under the lateral flow detection line, and organic-inorganic nanoflowers prepared from E. coli O157-specific antibodies as an organic component were attached to the lateral flow detection line. In the presence of E. coli O157, an organic-inorganic nanoflower-E. coli O157-antimicrobial peptide-labelled ferrocene sandwich structure is formed on the lateral flow detection line. Differential pulse voltammetry is applied using a smartphone-based device to monitor ferrocene on the detection line. The resulting electrochemical biosensor could specifically detect E. coli O157 with a limit of detection of 25 colony-forming units mL-1. Through substitution of antibodies of organic components in organic-inorganic nanoflowers, biosensors have great potential for the detection of other pathogens in biomedical research and clinical diagnosis.


Subject(s)
Biosensing Techniques , Electrochemical Techniques , Escherichia coli O157 , Escherichia coli O157/isolation & purification , Escherichia coli O157/immunology , Biosensing Techniques/methods , Immunoassay/methods , Immunoassay/instrumentation , Electrochemical Techniques/methods , Electrochemical Techniques/instrumentation , Limit of Detection , Nanostructures/chemistry , Electrodes , Ferrous Compounds/chemistry , Antibodies, Immobilized/immunology , Metallocenes/chemistry , Antibodies, Bacterial/chemistry , Antibodies, Bacterial/immunology , Antimicrobial Peptides/chemistry
19.
Mikrochim Acta ; 191(8): 454, 2024 07 08.
Article in English | MEDLINE | ID: mdl-38976069

ABSTRACT

An intelligent colorimetric sensing platform integrated with in situ immunomagnetic separation function was developed for ultrasensitive detection of Escherichia coli O157: H7 (E. coli O157: H7) in food. Captured antibody modified magnetic nanoparticles (cMNPs) and detection antibody/horseradish peroxidase (HRP) co-functionalized AuNPs (dHAuNPs) were firstly synthesized for targeted enrichment and colorimetric assay of E. coli O157: H7, in which remarkable signal amplification was realized by loading large amounts of HRP on the surface of AuNPs. Coupling with the optical collimation attachments and embedded magnetic separation module, a highly integrated optical device was constructed, by which in situ magnetic separation and high-quality imaging of 96-well microplates containing E. coli O157: H7 was achieved with a smartphone. The concentration of E. coli O157: H7 could be achieved in one-step by performing digital image colorimetric analysis of the obtained image with a custom-designed app. This biosensor possesses high sensitivity (1.63 CFU/mL), short detecting time (3 h), and good anti-interference performance even in real-sample testing. Overall, the developed method is expected to be a novel field detection platform for foodborne pathogens in water and food as well as for the diagnosis of infections due to its portability, ease of operation, and high feasibility.


Subject(s)
Biosensing Techniques , Colorimetry , Escherichia coli O157 , Food Microbiology , Gold , Horseradish Peroxidase , Immunomagnetic Separation , Metal Nanoparticles , Escherichia coli O157/isolation & purification , Colorimetry/methods , Gold/chemistry , Horseradish Peroxidase/chemistry , Immunomagnetic Separation/methods , Biosensing Techniques/methods , Metal Nanoparticles/chemistry , Food Contamination/analysis , Limit of Detection , Smartphone , Antibodies, Immobilized/immunology , Antibodies, Immobilized/chemistry , Magnetite Nanoparticles/chemistry
20.
Viruses ; 16(7)2024 Jul 17.
Article in English | MEDLINE | ID: mdl-39066317

ABSTRACT

Bacteriophages (phages) have gained considerable attention as effective antimicrobial agents that infect and kill pathogenic bacteria. Based on this feature, phages have been increasingly used to achieve food safety. They are stored in a medium or buffer to ensure stability; however, they cannot be directly applied to food under these conditions due to reasons such as regulatory considerations and concerns about marketability. This study developed a stabilizing solution that allowed the maintenance of phage activity for extended periods at room temperature while being directly applicable to food. The stability of phages stored in distilled water was relatively low. However, adding a stabilizer composed of sugars and salts improved the survival rates of phages significantly, resulting in stability for up to 48 weeks at room temperature. When Escherichia coli O157:H7-contaminated vegetables were washed with tap water containing phages, the phages reduced the pathogenic E. coli count by over 90% compared with washing with tap water alone. Additionally, when pathogenic E. coli-contaminated vegetables were placed in a phage-coated container and exposed to water, the coating of the container dissolved, releasing phages and lysing the pathogenic E. coli. This led to a significant 90% reduction in pathogenic E. coli contamination compared to that after water rinsing. These results suggest an effective and economical method for maintaining phage activity and establishing the potential for commercialization through application in the food industry.


Subject(s)
Bacteriophages , Escherichia coli O157 , Food Microbiology , Temperature , Vegetables , Bacteriophages/physiology , Vegetables/microbiology , Vegetables/virology , Escherichia coli O157/virology , Foodborne Diseases/prevention & control , Foodborne Diseases/microbiology , Food Safety
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