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1.
FEBS J ; 285(10): 1923-1943, 2018 05.
Article in English | MEDLINE | ID: mdl-29633551

ABSTRACT

The berberine bridge enzyme from the California poppy Eschscholzia californica (EcBBE) catalyzes the oxidative cyclization of (S)-reticuline to (S)-scoulerine, that is, the formation of the berberine bridge in the biosynthesis of benzylisoquinoline alkaloids. Interestingly, a large number of BBE-like genes have been identified in plants that lack alkaloid biosynthesis. This finding raised the question of the primordial role of BBE in the plant kingdom, which prompted us to investigate the closest relative of EcBBE in Physcomitrella patens (PpBBE1), the most basal plant harboring a BBE-like gene. Here, we report the biochemical, structural, and in vivo characterization of PpBBE1. Our studies revealed that PpBBE1 is structurally and biochemically very similar to EcBBE. In contrast to EcBBE, we found that PpBBE1 catalyzes the oxidation of the disaccharide cellobiose to the corresponding lactone, that is, PpBBE1 is a cellobiose oxidase. The enzymatic reaction mechanism was characterized by a structure-guided mutagenesis approach that enabled us to assign a catalytic role to amino acid residues in the active site of PpBBE1. In vivo experiments revealed the highest level of PpBBE1 expression in chloronema, the earliest stage of the plant's life cycle, where carbon metabolism is strongly upregulated. It was also shown that the enzyme is secreted to the extracellular space, where it may be involved in later steps of cellulose degradation, thereby allowing the moss to make use of cellulose for energy production. Overall, our results suggest that the primordial role of BBE-like enzymes in plants revolved around primary metabolic reactions in carbohydrate utilization. DATABASE: Structural data are available in the PDB under the accession numbers 6EO4 and 6EO5.


Subject(s)
Berberine/metabolism , Bryopsida/enzymology , Carbohydrate Dehydrogenases/metabolism , Bryopsida/genetics , Carbohydrate Dehydrogenases/chemistry , Carbohydrate Dehydrogenases/genetics , Catalysis , Catalytic Domain , Cellulose/metabolism , Crystallography, X-Ray , Cyclization , Eschscholzia/enzymology , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Genes, Plant , Mutagenesis, Site-Directed , Protein Conformation , Substrate Specificity , Up-Regulation
2.
Plant Cell Physiol ; 59(2): 222-233, 2018 Feb 01.
Article in English | MEDLINE | ID: mdl-29301019

ABSTRACT

Land plants produce specialized low molecular weight metabolites to adapt to various environmental stressors, such as UV radiation, pathogen infection, wounding and animal feeding damage. Due to the large variety of stresses, plants produce various chemicals, particularly plant species-specific alkaloids, through specialized biosynthetic pathways. In this study, using a draft genome sequence and querying known biosynthetic cytochrome P450 (P450) enzyme-encoding genes, we characterized the P450 genes involved in benzylisoquinoline alkaloid (BIA) biosynthesis in California poppy (Eschscholzia californica), as P450s are key enzymes involved in the diversification of specialized metabolism. Our in silico studies showed that all identified enzyme-encoding genes involved in BIA biosynthesis were found in the draft genome sequence of approximately 489 Mb, which covered approximately 97% of the whole genome (502 Mb). Further analyses showed that some P450 families involved in BIA biosynthesis, i.e. the CYP80, CYP82 and CYP719 families, were more enriched in the genome of E. californica than in the genome of Arabidopsis thaliana, a plant that does not produce BIAs. CYP82 family genes were highly abundant, so we measured the expression of CYP82 genes with respect to alkaloid accumulation in different plant tissues and two cell lines whose BIA production differs to estimate the functions of the genes. Further characterization revealed two highly homologous P450s (CYP82P2 and CYP82P3) that exhibited 10-hydroxylase activities with different substrate specificities. Here, we discuss the evolution of the P450 genes and the potential for further genome mining of the genes encoding the enzymes involved in BIA biosynthesis.


Subject(s)
Alkaloids/biosynthesis , Biosynthetic Pathways/genetics , Cytochrome P-450 Enzyme System/genetics , Data Mining , Eschscholzia/enzymology , Eschscholzia/genetics , Genes, Plant , Alkaloids/chemistry , Base Sequence , Cytochrome P-450 Enzyme System/metabolism , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Multigene Family , Pichia , Sequence Analysis, DNA
3.
Molecules ; 22(11)2017 Nov 04.
Article in English | MEDLINE | ID: mdl-29113053

ABSTRACT

BACKGROUND: Plant lipoxygenases (LOXs, EC 1.13.11.12) are involved in lipid degradation, regulation of growth and development, senescence, and defence reactions. LOX represents the starting enzyme of the octadecanoid pathway. The aim of the work was to purify LOX from California poppy (Eschscholtzia californica Cham.), to determine its biochemical properties and to identify and quantify the products of LOX reaction with unsaturated fatty acids. METHODS: LOX from California poppy seedlings was purified by hydrophobic chromatography (Phenyl-Sepharose CL-4B) and by ion-exchange chromatography (Q-Sepharose). The isolated LOX was incubated with linoleic acid used as a substrate. The HPLC experiments were performed with the Agilent Technologies 1050 series HPLC system. For the preparative separation of a mixture of hydroxy fatty acids from the sample matrix, the RP-HPLC method was used (column 120-5 Nucleosil C18). Then, the NP-HPLC analysis (separation, identification, and determination) of hydroxy fatty acid isomers was carried out on a Zorbax Rx-SIL column. RESULTS: The purified LOX indicates the presence of a nontraditional plant enzyme with dual positional specificity (a ratio of 9- and 13-hydroperoxide products 1:1), a relative molecular mass of 85 kDa, a pH optimum of 6.5, an increasing activity stimulation by CaCl2 till 2 mM, and a high substrate reactivity to linoleic acid with kinetic values of KM 2.6 mM and Vmax 3.14 µM/min/mg. CONCLUSIONS: For the first time, the LOX from California poppy seedlings was partially purified and the biochemical properties of the enzyme were analyzed. A dual positional specificity of the LOX found from California poppy seedlings is in agreement with the results obtained for LOXs isolated from other Papaveraceaes. A 1:1 ratio of 9-/13-HODE is attractive for the simultaneous investigation of both biotic stress responses (indicated by the 9-HODE marker) and the biosynthesis of jasmonic acid and jasmonates (indicated by the 13-HODE marker).


Subject(s)
Eschscholzia/enzymology , Fatty Acids, Unsaturated/chemistry , Lipoxygenase/chemistry , Plant Proteins/chemistry , Seedlings/enzymology , Chromatography, High Pressure Liquid , Fatty Acids, Unsaturated/metabolism , Lipoxygenase/metabolism , Plant Proteins/metabolism
4.
Plant Cell Physiol ; 58(9): 1528-1540, 2017 Sep 01.
Article in English | MEDLINE | ID: mdl-28922749

ABSTRACT

California poppy (Eschscholzia californica), a member of the Papaveraceae family, produces many biologically active benzylisoquinoline alkaloids (BIAs), such as sanguinarine, macarpine and chelerythrine. Sanguinarine biosynthesis has been elucidated at the molecular level, and its biosynthetic genes have been isolated and used in synthetic biology approaches to produce BIAs in vitro. However, several genes involved in the biosynthesis of macarpine and chelerythrine have not yet been characterized. In this study, we report the isolation and characterization of a novel O-methyltransferase (OMT) involved in the biosynthesis of partially characterized BIAs, especially chelerythrine. A search of the RNA sequence database from NCBI and PhytoMetaSyn for the conserved OMT domain identified 68 new OMT-like sequences, of which the longest 22 sequences were selected based on sequence similarity. Based on their expression in cell lines with different macarpine/chelerythrine profiles, we selected three OMTs (G2, G3 and G11) for further characterization. G3 expression in Escherichia coli indicated O-methylation activity of the simple benzylisoquinolines, including reticuline and norreticuline, and the protoberberine scoulerine with dual regio-reactivities. G3 produced 7-O-methylated, 3'-O-methylated and dual O-methylated products from reticuline and norreticuline, and 9-O-methylated tetrahydrocolumbamine, 2-O-methylscoulerine and tetrahydropalmatine from scoulerine. Further enzymatic analyses suggested that G3 is a scoulerine-9-O-methyltransferase for the biosynthesis of chelerythrine in California poppy. In the present study, we discuss the physiological role of G3 in BIA biosynthesis.


Subject(s)
Alkaloids/biosynthesis , Benzylisoquinolines/metabolism , Eschscholzia/metabolism , Amino Acid Sequence , Benzylisoquinolines/chemistry , Chromatography, Liquid , Eschscholzia/enzymology , Eschscholzia/genetics , Gene Expression Regulation, Plant , Genetic Association Studies , Kinetics , Mass Spectrometry , Methylation , Methyltransferases/chemistry , Methyltransferases/metabolism , Phylogeny , Recombinant Proteins/metabolism
5.
Arch Biochem Biophys ; 632: 88-103, 2017 10 15.
Article in English | MEDLINE | ID: mdl-28676375

ABSTRACT

Biological oxidations form the basis of life on earth by utilizing organic compounds as electron donors to drive the generation of metabolic energy carriers, such as ATP. Oxidative reactions are also important for the biosynthesis of complex compounds, i.e. natural products such as alkaloids that provide vital benefits for organisms in all kingdoms of life. The vitamin B2-derived cofactors flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) enable an astonishingly diverse array of oxidative reactions that is based on the versatility of the redox-active isoalloxazine ring. The family of FAD-linked oxidases can be divided into subgroups depending on specific sequence features in an otherwise very similar structural context. The sub-family of berberine bridge enzyme (BBE)-like enzymes has recently attracted a lot of attention due to the challenging chemistry catalyzed by its members and the unique and unusual bi-covalent attachment of the FAD cofactor. This family is the focus of the present review highlighting recent advancements into the structural and functional aspects of members from bacteria, fungi and plants. In view of the unprecedented reaction catalyzed by the family's namesake, BBE from the California poppy, recent studies have provided further insights into nature's treasure chest of oxidative reactions.


Subject(s)
Berberine/chemistry , Eschscholzia/enzymology , Flavin Mononucleotide/chemistry , Flavin-Adenine Dinucleotide/chemistry , Oxidoreductases/chemistry , Plant Proteins/chemistry , Berberine/metabolism , Flavin Mononucleotide/metabolism , Flavin-Adenine Dinucleotide/metabolism , Oxidation-Reduction , Oxidoreductases/metabolism , Plant Proteins/metabolism
6.
Angew Chem Int Ed Engl ; 54(50): 15051-4, 2015 Dec 07.
Article in English | MEDLINE | ID: mdl-26487450

ABSTRACT

N-Dealkylation methods are well described for organic chemistry and the reaction is known in nature and drug metabolism; however, to our knowledge, enantioselective N-dealkylation has not been yet reported. In this study, exclusively the (S)-enantiomers of racemic N-ethyl tertiary amines (1-benzyl-N-ethyl-1,2,3,4-tetrahydroisoquinolines) were dealkylated to give the corresponding secondary (S)-amines in an enantioselective fashion at the expense of molecular oxygen. The reaction is catalyzed by the berberine bridge enzyme, which is known for CC bond formation. The dealkylation was demonstrated on a 100 mg scale and gave optically pure dealkylated products (ee>99 %).


Subject(s)
Amines/metabolism , Isoquinolines/metabolism , Oxidoreductases, N-Demethylating/metabolism , Alkylation , Amines/chemistry , Biocatalysis , Eschscholzia/enzymology , Isoquinolines/chemistry , Molecular Conformation , Oxidation-Reduction , Oxidoreductases, N-Demethylating/chemistry , Oxygen/chemistry , Oxygen/metabolism , Stereoisomerism
7.
Methods Mol Biol ; 1009: 241-9, 2013.
Article in English | MEDLINE | ID: mdl-23681539

ABSTRACT

Phospholipases of the A type constitute a large family of esterases that catalyze the hydrolysis of the fatty acid ester bonds in phospholipids and thus generate lysophospholipids and fatty acids. Both products or their metabolites are important signal molecules in the cellular adaptation to stress, developmental processes and several diseases in plants and animals. The assay of PLA activity has been much promoted by the availability of phospholipid substrates with fluorophores at one or two fatty acids. The double labeled compounds display an increase of fluorescence due to the escape from intramolecular quenching or FRET. They thus allow the sensitive monitoring of PLA activity even without a separation of the hydrolysis products. This chapter is focused on the proper use of fluorescent (BODIPY) labelled substrates for assays of PLA activity in cells and subcellular fractions by fluorimetric analysis and classical or confocal microscopy.


Subject(s)
Enzyme Assays/methods , Eschscholzia/enzymology , Phospholipases A/metabolism , Boron Compounds/chemistry , Boron Compounds/metabolism , Cell Membrane/enzymology , Fluorescence , Fluorescent Dyes/chemistry , Fluorescent Dyes/metabolism , Microscopy, Fluorescence , Molecular Probes , Plant Cells/enzymology , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Substrate Specificity
8.
Biochem J ; 450(3): 497-509, 2013 Mar 15.
Article in English | MEDLINE | ID: mdl-23252374

ABSTRACT

The plasma membrane of the California poppy is known to harbour a PLA2 (phospholipase A2) that is associated with the Gα protein which facilitates its activation by a yeast glycoprotein, thereby eliciting the biosynthesis of phytoalexins. To understand the functional architecture of the protein complex, we titrated purified plasma membranes with the Gα protein (native or recombinant) and found that critical amounts of this subunit keep PLA2 in a low-activity state from which it is released either by elicitor plus GTP or by raising the Gα concentration, which probably causes oligomerization of Gα, as supported by FRET (fluorescence resonance energy transfer)-orientated fluorescence imaging and a semiquantitative split-ubiquitin assay. All effects of Gα were blocked by specific antibodies. A low-Gα mutant showed elevated PLA2 activity and lacked the GTP-dependent stimulation by elicitor, but regained this capability after pre-incubation with Gα. The inhibition by Gα and the GTP-dependent stimulation of PLA2 were diminished by inhibitors of peptidylprolyl cis-trans isomerases. A cyclophilin was identified by sequence in the plasma membrane and in immunoprecipitates with anti-Gα antibodies. We conclude that soluble and target-associated Gα interact at the plasma membrane to build complexes of varying architecture and signal amplification. Protein-folding activity is probably required to convey conformational transitions from Gα to its target PLA2.


Subject(s)
Cell Membrane/metabolism , Cyclophilins/physiology , GTP-Binding Protein alpha Subunits, Gi-Go/physiology , Phospholipases A2/metabolism , Plants/metabolism , Cells, Cultured , Cyclophilins/genetics , Cyclophilins/metabolism , Enzyme Activation , Eschscholzia/enzymology , Eschscholzia/metabolism , Fluorescence Resonance Energy Transfer/methods , GTP-Binding Protein alpha Subunits, Gi-Go/genetics , GTP-Binding Protein alpha Subunits, Gi-Go/metabolism , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Phospholipases A2/genetics , Plants/enzymology , Plants/genetics , Plants, Genetically Modified , Protein Binding/genetics , Protein Binding/physiology , Signal Transduction/physiology , Tissue Distribution
9.
Mol Plant ; 3(5): 927-39, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20729473

ABSTRACT

Many plant cells respond to pathogens by the induction of phytoalexin biosynthesis, but the underlying changes of gene expression are often obscured by their close linkage to the complex rearrangements during pathogen defense, especially the hypersensitive cell death. In root-derived cell cultures of Eschscholzia californica, the overproduction of cytotoxic benzophenanthridine alkaloids can be triggered by a minimum of pathogen pressure that does not evoke hypersensitive reactions. Such conditions activate a signal chain that is initiated by a short contact to low concentrations of yeast glycoprotein elicitor and includes a transient acidification of the cytoplasm. In contrast, high elicitor concentrations signal via an increase of jasmonate and trigger hypersensitive cell death, preceded by a drastic decay of translatable mRNAs. The main changes in protein and mRNA patterns caused by either signal path were compared by 2D proteomic separation, MS/MS sequencing and mRNA-in vitro translation. The four proteins showing the highest overexpression were identical between cells that received low or high-elicitor treatment and overlapped with the three proteins most up-regulated by artificial pH shifts. They comprised one biosynthetic enzyme (norcoclaurine:SAM 4' O-methyl-transferase) plus a unique combination of stress-protective proteins: a heat shock protein (hsp 70); a peptidyl-prolyl-cis/trans isomerase (cyclophilin); and a glyceraldehyde-3-phosphate dehydrogenase. It appears that overproduction of the benzophenanthridine phytoalexins requires the up-regulation of a rate-limiting biosynthetic enzyme plus the coordinated expression of a specific set of protective enzymes and thus is managed like an oxidative stress.


Subject(s)
Eschscholzia/enzymology , Eschscholzia/metabolism , Sesquiterpenes/metabolism , Electrophoresis, Gel, Two-Dimensional , Gene Expression Regulation, Plant , Hydrogen-Ion Concentration , Plant Proteins/genetics , Plant Proteins/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sesquiterpenes/chemistry , Signal Transduction/genetics , Signal Transduction/physiology , Tandem Mass Spectrometry , Phytoalexins
10.
Methods Mol Biol ; 643: 95-109, 2010.
Article in English | MEDLINE | ID: mdl-20552446

ABSTRACT

Benzylisoquinoline alkaloids are one of the most important groups of secondary metabolites and include the economically important analgesic morphine and the antimicrobial agent berberine. To improve the productivity of these alkaloids, we investigated the effects of putative rate-limiting step enzymes in alkaloid biosynthesis. We constructed several over-expression vectors for biosynthetic enzymes and introduced them into cultured California poppy, a model isoquinoline alkaloid-producing plant. HPLC/LC-MS analysis of transgenic cells revealed that these enzymes varied in their ability to increase alkaloid production. We describe the use of a rate-limiting step gene to improve alkaloid productivity.


Subject(s)
Benzylisoquinolines/metabolism , Eschscholzia/enzymology , Genetic Engineering/methods , Agrobacterium tumefaciens/genetics , Cytochrome P-450 Enzyme System/genetics , Cytochrome P-450 Enzyme System/metabolism , DNA, Plant/genetics , DNA, Plant/isolation & purification , Eschscholzia/cytology , Eschscholzia/genetics , Eschscholzia/metabolism , Gene Expression , Genetic Vectors/genetics , Kinetics , RNA, Plant/genetics , RNA, Plant/isolation & purification , Transformation, Genetic
11.
Plant Cell Physiol ; 51(6): 949-59, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20427510

ABSTRACT

Higher plants produce a diverse array of secondary metabolites. These chemicals are synthesized from simple precursors through multistep reactions. To understand how plant cells developed such a complicated metabolism, we examined the plasticity of benzyl isoquinoline alkaloid biosynthesis in transgenic Eschscholzia californica cells with the ectopic expression of Coptis japonica scoulerine-9-O-methyltransferase (CjSMT). CjSMT catalyzes the O-methylation of scoulerine to produce tetrahydrocolumbamine (THC) in berberine biosynthesis and is not involved in benzophenanthridine alkaloid biosynthesis in E. californica. While a preliminary characterization confirmed that columbamine (oxidized product of THC) was produced in transgenic E. californica cells, many newly found peaks were not identified. Here, we report the identification of novel products, including allocryptopine and 10-hydroxychelerythrine. This result indicates that CjSMT reaction products were further converted by endogenous enzymes to produce double O-methylated compounds instead of a methylenedioxy ring at the 7,8-position of the original benzophenanthridine alkaloids. Further metabolite profiling revealed the enhanced diversification of the alkaloid profile in transgenic cells. Metabolic plasticity and the enzymes involved in metabolic diversity are discussed.


Subject(s)
Alkaloids/biosynthesis , Benzylisoquinolines/metabolism , Eschscholzia/enzymology , Metabolome , Chromatography, High Pressure Liquid , Cluster Analysis , Eschscholzia/genetics , Mass Spectrometry , Methyltransferases/genetics , Plants, Genetically Modified/enzymology , Plants, Genetically Modified/genetics , RNA, Plant/genetics
12.
Plant J ; 60(4): 729-43, 2009 Nov.
Article in English | MEDLINE | ID: mdl-19624470

ABSTRACT

An integrated approach using targeted metabolite profiles and modest EST libraries each containing approximately 3500 unigenes was developed in order to discover and functionally characterize novel genes involved in plant-specialized metabolism. EST databases have been established for benzylisoquinoline alkaloid-producing cell cultures of Eschscholzia californica, Papaver bracteatum and Thalictrum flavum, and are a rich repository of alkaloid biosynthetic genes. ESI-FTICR-MS and ESI-MS/MS analyses facilitated unambiguous identification and relative quantification of the alkaloids in each system. Manual integration of known and candidate biosynthetic genes in each EST library with benzylisoquinoline alkaloid biosynthetic networks assembled from empirical metabolite profiles allowed identification and functional characterization of four N-methyltransferases (NMTs). One cDNA from T. flavum encoded pavine N-methyltransferase (TfPavNMT), which showed a unique preference for (+/-)-pavine and represents the first isolated enzyme involved in the pavine alkaloid branch pathway. Correlation of the occurrence of specific alkaloids, the complement of ESTs encoding known benzylisoquinoline alkaloid biosynthetic genes and the differential substrate range of characterized NMTs demonstrated the feasibility of bilaterally predicting enzyme function and species-dependent specialized metabolite profiles.


Subject(s)
Benzylisoquinolines/metabolism , Eschscholzia/enzymology , Gene Expression Profiling , Methyltransferases/isolation & purification , Papaver/enzymology , Thalictrum/enzymology , DNA, Complementary/genetics , DNA, Plant/genetics , Eschscholzia/genetics , Expressed Sequence Tags , Gene Expression Regulation, Plant , Gene Library , Genomics , Methyltransferases/genetics , Methyltransferases/metabolism , Molecular Structure , Papaver/genetics , Plant Proteins/genetics , Plant Proteins/isolation & purification , Plant Proteins/metabolism , Sequence Analysis, Protein , Thalictrum/genetics
13.
Phytochemistry ; 70(9): 1092-1097, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19570558

ABSTRACT

Berberine bridge enzyme catalyzes the stereospecific oxidation and carbon-carbon bond formation of (S)-reticuline to (S)-scoulerine. In addition to this type of reactivity the enzyme can further oxidize (S)-scoulerine to the deeply red protoberberine alkaloid dehydroscoulerine albeit with a much lower rate of conversion. In the course of the four electron oxidation, no dihydroprotoberberine species intermediate was detectable suggesting that the second oxidation step leading to aromatization proceeds at a much faster rate. Performing the reaction in the presence of oxygen and under anoxic conditions did not affect the kinetics of the overall reaction suggesting no strict requirement for oxygen in the oxidation of the unstable dihydroprotoberberine intermediate. In addition to the kinetic characterization of this reaction we also present a structure of the enzyme in complex with the fully oxidized product. Combined with information available for the binding modes of (S)-reticuline and (S)-scoulerine a possible mechanism for the additional oxidation is presented. This is compared to previous reports of enzymes ((S)-tetrahydroprotoberberine oxidase and canadine oxidase) showing a similar type of reactivity in different plant species.


Subject(s)
Benzylisoquinolines/metabolism , Berberine Alkaloids/metabolism , Eschscholzia/chemistry , Eschscholzia/enzymology , Oxidoreductases, N-Demethylating/metabolism , Benzylisoquinolines/chemistry , Berberine Alkaloids/chemistry , Catalysis , Molecular Structure , Oxidation-Reduction , Oxidoreductases Acting on CH-CH Group Donors/metabolism , Stereoisomerism
14.
J Biol Chem ; 284(30): 19993-20001, 2009 Jul 24.
Article in English | MEDLINE | ID: mdl-19457868

ABSTRACT

Berberine bridge enzyme (BBE) is a member of the recently discovered family of bicovalently flavinylated proteins. In this group of enzymes, the FAD cofactor is linked via its 8alpha-methyl group and the C-6 atom to conserved histidine and cysteine residues, His-104 and Cys-166 for BBE, respectively. 6-S-Cysteinylation has recently been shown to have a significant influence on the redox potential of the flavin cofactor; however, 8alpha-histidylation evaded a closer characterization due to extremely low expression levels upon substitution. Co-overexpression of protein disulfide isomerase improved expression levels and allowed isolation and purification of the H104A protein variant. To gain more insight into the functional role of the unusual dual mode of cofactor attachment, we solved the x-ray crystal structures of two mutant proteins, H104A and C166A BBE, each lacking one of the covalent linkages. Information from a structure of wild type enzyme in complex with the product of the catalyzed reaction is combined with the kinetic and structural characterization of the protein variants to demonstrate the importance of the bicovalent linkage for substrate binding and efficient oxidation. In addition, the redox potential of the flavin cofactor is enhanced additively by the dual mode of cofactor attachment. The reduced level of expression for the H104A mutant protein and the difficulty of isolating even small amounts of the protein variant with both linkages removed (H104A-C166A) also points toward a possible role of covalent flavinylation during protein folding.


Subject(s)
Eschscholzia/enzymology , Flavin-Adenine Dinucleotide/chemistry , Flavin-Adenine Dinucleotide/metabolism , Oxidoreductases, N-Demethylating/chemistry , Oxidoreductases, N-Demethylating/metabolism , Crystallography, X-Ray , Gene Expression , Kinetics , Models, Molecular , Mutant Proteins/chemistry , Mutant Proteins/genetics , Mutant Proteins/isolation & purification , Mutant Proteins/metabolism , Oxidation-Reduction , Oxidoreductases, N-Demethylating/genetics , Oxidoreductases, N-Demethylating/isolation & purification , Protein Binding , Protein Conformation
15.
Plant Cell Rep ; 28(1): 123-33, 2009 Jan.
Article in English | MEDLINE | ID: mdl-18854999

ABSTRACT

Eschscholzia californica produces various types of isoquinoline alkaloids. The structural diversity of these chemicals is often due to cytochrome P450 (P450) activities. Members of the CYP719A subfamily, which are found only in isoquinoline alkaloid-producing plant species, catalyze methylenedioxy bridge-forming reactions. In this study, we isolated four kinds of CYP719A genes from E. californica to characterize their functions. These four cDNAs encoded amino acid sequences that were highly homologous to Coptis japonica CYP719A1 and E. californica CYP719A2 and CYP719A3, which suggested that these gene products may be involved in isoquinoline alkaloid biosynthesis in E. californica, especially in methylenedioxy bridge-forming reactions. Expression analysis of these genes showed that two genes (CYP719A9 and CYP719A11) were preferentially expressed in plant leaf, where pavine-type alkaloids accumulate, whereas the other two showed higher expression in root than in other tissues. They were suggested to have distinct physiological functions in isoquinoline alkaloid biosynthesis. Enzyme assay analysis using recombinant proteins expressed in yeast showed that CYP719A5 had cheilanthifoline synthase activity, which was expected based on the similarity of its primary structure to that of Argemone mexicana cheilanthifoline synthase (deposited at DDBJ/GenBanktrade mark/EMBL). In addition, enzyme assay analysis of recombinant CYP719A9 suggested that it has methylenedioxy bridge-forming activity toward (R,S)-reticuline. CYP719A9 might be involved in the biosynthesis of pavine- and/or simple benzylisoquinoline-type alkaloids, which have a methylenedioxy bridge in an isoquinoline ring, in E. californica leaf.


Subject(s)
Alkaloids/biosynthesis , Cytochrome P-450 Enzyme System/metabolism , Eschscholzia/enzymology , Isoquinolines/metabolism , Plant Proteins/metabolism , Amino Acid Sequence , Cloning, Molecular , Cytochrome P-450 Enzyme System/genetics , DNA, Complementary/genetics , Eschscholzia/genetics , Gene Expression Regulation, Plant , Genes, Plant , Molecular Sequence Data , Molecular Structure , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Proteins/genetics , Plant Roots/genetics , Plant Roots/metabolism , RNA, Plant/genetics , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Alignment
16.
Nat Chem Biol ; 4(12): 739-41, 2008 Dec.
Article in English | MEDLINE | ID: mdl-18953357

ABSTRACT

Berberine bridge enzyme catalyzes the conversion of (S)-reticuline to (S)-scoulerine by formation of a carbon-carbon bond between the N-methyl group and the phenolic ring. We elucidated the structure of berberine bridge enzyme from Eschscholzia californica and determined the kinetic rates for three active site protein variants. Here we propose a catalytic mechanism combining base-catalyzed proton abstraction with concerted carbon-carbon coupling accompanied by hydride transfer from the N-methyl group to the N5 atom of the FAD cofactor.


Subject(s)
Eschscholzia/enzymology , Alkaloids , Berberine Alkaloids , Catalysis , Catalytic Domain , Flavin-Adenine Dinucleotide/metabolism , Kinetics , Oxidoreductases, N-Demethylating/chemistry , Oxidoreductases, N-Demethylating/metabolism , Oxygen , Protons
17.
Planta ; 229(1): 183-91, 2008 Dec.
Article in English | MEDLINE | ID: mdl-18807068

ABSTRACT

In cultured cells of California poppy (Eschscholzia californica), lysophosphatidylcholine (LPC) triggers a signal path that finally induces alkaloid biosynthesis. LPC is transiently generated by elicitor-activated phospholipase A(2) of the plasma membrane. Externally added LPC is rapidly acylated by a membrane-bound enzyme that shows the highest specific activity in the purified plasma membrane. The fatty acid incorporated into the sn-2 position of LPC is preferentially linoleic (18:2), which is the most abundant acyl component in the PC species of Eschscholzia cells, but a minor component of the pool of free fatty acids. The fatty acid at the sn-1 position of LPC is less important for substrate specificity. The capacity of LPC acylation by intact cells or isolated plasma membranes by far exceeds the rate of LPC generation by activated phospholipase A(2) and is not limited by the availability of acyl donors. Metabolites other than phosphatidylcholine (PC) were not significantly produced from labeled LPC within 20 min, indicating that lysophospholipases are not significantly contributing to the short-time metabolism of LPC. It is concluded that reacylation to PC is the dominating process in the detoxication of LPC and ensures the transient character of its steady state concentrations, even at maximum phospholipase A(2) activities.


Subject(s)
Eschscholzia/metabolism , Lysophosphatidylcholines/metabolism , Acylation/drug effects , Amidohydrolases/metabolism , Cell Membrane/drug effects , Cell Membrane/enzymology , Eschscholzia/cytology , Eschscholzia/drug effects , Eschscholzia/enzymology , Fatty Acids/analysis , Fatty Acids/pharmacology , Lysophosphatidylcholines/analysis , Lysophosphatidylcholines/pharmacology , Mass Spectrometry , Phospholipases A2/metabolism , Subcellular Fractions/drug effects , Subcellular Fractions/enzymology , Substrate Specificity/drug effects
18.
Biotechnol Lett ; 29(12): 2001-5, 2007 Dec.
Article in English | MEDLINE | ID: mdl-17628748

ABSTRACT

Production of the benzophenanthridine alkaloids in Eschscholtzia californica suspension cell cultures was optimized by adding 0.5 mg methyl jasmonate (MJ) and 0.02 mg salicylic acid (SA)/g FCW after 7 days cultivation. Sanguinarine reached 24 mg/g DCW by such treatment; 10 times higher than in control cell cultures. MJ and SA induced expression of berberine bridge enzyme and 3'-hydroxy-(S)-N-methylcoclaurine-4'-O-methyltransferase, respectively. MJ plus SA induced over-expression of both enzymes.


Subject(s)
Acetates/pharmacology , Alkaloids/biosynthesis , Benzophenanthridines/biosynthesis , Cyclopentanes/pharmacology , Eschscholzia/drug effects , Eschscholzia/metabolism , Oxylipins/pharmacology , Plant Proteins/metabolism , Salicylic Acid/pharmacology , Blotting, Western , Cell Culture Techniques , Drug Synergism , Eschscholzia/cytology , Eschscholzia/enzymology , Methyltransferases/metabolism , Oxidoreductases, N-Demethylating/metabolism , Signal Transduction/drug effects , Time Factors
19.
FEBS J ; 274(4): 1019-35, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17250743

ABSTRACT

(S)-stylopine is an important intermediate in the biosynthesis of benzophenanthridine alkaloids, such as sanguinarine. Stylopine biosynthesis involves the sequential formation of two methylenedioxy bridges. Although the methylenedioxy bridge-forming P450 (CYP719) involved in berberine biosynthesis has been cloned from Coptis japonica[Ikezawa N, Tanaka M, Nagayoshi M, Shinkyo R, Sakaki T, Inouye K & Sato F (2003) J Biol Chem278, 38557-38565], no information is available regarding the genes for methylenedioxy bridge-forming enzymes in stylopine biosynthesis. Two cytochrome P450 cDNAs involved in stylopine biosynthesis were isolated using degenerate primers designed for C. japonica CYP719 from cultured Eschscholzia californica cells. Heterologous expression in Saccharomyces cerevisiae showed that both CYP719A2 and CYP719A3 had stylopine synthase activity to catalyze methylenedioxy bridge-formation from cheilanthifoline to stylopine, but not cheilanthifoline synthase activity to convert scoulerine to cheilanthifoline. Functional differences and expression patterns of CYP719A2 and CYP719A3 were examined to investigate their physiological roles in stylopine biosynthesis. Enzymatic analysis showed that CYP719A2 had high substrate affinity only toward (R,S)-cheilanthifoline, whereas CYP719A3 had high affinity toward three similar substrates (R,S)-cheilanthifoline, (S)-scoulerine, and (S)-tetrahydrocolumbamine. An expression analysis in E. californica plant tissues showed that CYP719A2 and CYP719A3 exhibited expression patterns similar to those of three stylopine biosynthetic genes (CYP80B1, berberine bridge enzyme, and S-adenosyl-l-methionine : 3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase), whereas the specific expression of CYP719A3 in root was notable. Treatment of E. californica seedlings with methyl jasmonate resulted in the coordinated induction of CYP719A2 and CYP719A3 genes. The physiological roles of CYP719A2 and CYP719A3 in stylopine biosynthesis are discussed.


Subject(s)
Berberine Alkaloids/metabolism , Cytochrome P-450 Enzyme System/genetics , Cytochrome P-450 Enzyme System/metabolism , Eschscholzia/enzymology , Plant Proteins/genetics , Plant Proteins/metabolism , Acetates/pharmacology , Amino Acid Sequence , Berberine/chemistry , Berberine/metabolism , Cloning, Molecular , Cyclopentanes/pharmacology , DNA, Complementary/metabolism , Eschscholzia/genetics , Eschscholzia/metabolism , Methyltransferases/metabolism , Molecular Sequence Data , Oxylipins , Plant Growth Regulators/pharmacology , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Seeds/metabolism , Sequence Alignment , Substrate Specificity
20.
Plant Cell Environ ; 29(2): 291-302, 2006 Feb.
Article in English | MEDLINE | ID: mdl-17080644

ABSTRACT

Cultured cells of Eschscholzia californica respond to a yeast glycoprotein elicitor by producing benzophenanthridine alkaloids, which are excreted into the cell wall and the outer medium. These compounds, preferentially sanguinarine, are efficient phytoalexins because of their ability to intercalate double-stranded DNA (dsDNA), penetrate membranes and inhibit various enzymes containing SH-groups. Externally added sanguinarine is rapidly taken up by intact cells and converted to dihydrosanguinarine, which is substituted intracellularly according to the biosynthetic route. A 29.5 kDa soluble enzyme that catalyses the reduction of sanguinarine and chelerythrine by either NADPH or NADH has been isolated and purified to homogeneity. Benzophenanthridines that accumulate in the outer medium, mainly 10-OH-chelerythrine, chelirubine and macarpine, are converted by the isolated enzyme and by intact cells at much slower rates than sanguinarine. The cellular capacity of uptake and conversion of sanguinarine largely surpasses the rate of alkaloid production. We conclude that the sanguinarine produced by intact cells, after excretion and binding to cell wall elements, is rapidly reabsorbed and reduced to the less toxic dihydrosanguinarine, which then undergoes further biosynthetic reactions. This recycling process would allow the presence of the toxic phytoalexin at the cellular surface without taking the risk of injuring the producing cell.


Subject(s)
Alkaloids/metabolism , Benzophenanthridines/metabolism , Eschscholzia/enzymology , Isoquinolines/metabolism , Oxidoreductases/metabolism , Cells, Cultured , Glycoproteins/analysis , Inactivation, Metabolic/physiology , Saccharomyces cerevisiae/chemistry
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